[svn-r14824] Purpose: Updating HDF5 1.8 to use automake 1.10.1 and libtool 2.2

Description:     Updated bin/reconfigure script to reflect the new versions of
                 libtool and automake in the /home1/packages/ directory.

                 Rearranged configure.in script. For some reason, when using
                 libtool 2.2, the libtool script doesn't generate until
                 later in the configuration process, so I had to move
                 a test that parsed through the libtool script to a point 
                 after where it was actually being generated.

                 Ran libtoolize on the project, and ran bin/reconfigure to
                 regenerate configure and Makefile.in's throughout.

Tested:          kagiso, smirom, linew, tg-login

5 files changed, 86 insertions, 65 deletions

diff --git a/fortran/Makefile.in b/fortran/Makefile.in
index 215b5bf..f24d69a 100644
--- a/fortran/Makefile.in
+++ b/fortran/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.10 from Makefile.am.
+# Makefile.in generated by automake 1.10.1 from Makefile.am.
 # @configure_input@
 
 # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005, 2006  Free Software Foundation, Inc.
+# 2003, 2004, 2005, 2006, 2007, 2008  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -114,14 +114,14 @@ DEFAULT_API_VERSION = @DEFAULT_API_VERSION@
 DEFS = @DEFS@
 DEPDIR = @DEPDIR@
 DEPRECATED_SYMBOLS = @DEPRECATED_SYMBOLS@
+DSYMUTIL = @DSYMUTIL@
+DUMPBIN = @DUMPBIN@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
-ECHO = @ECHO@
 ECHO_C = @ECHO_C@
 ECHO_N = @ECHO_N@
 ECHO_T = @ECHO_T@
 EGREP = @EGREP@
 EXEEXT = @EXEEXT@
-F77 = @F77@
 
 # Make sure that these variables are exported to the Makefiles
 F9XMODEXT = @F9XMODEXT@
@@ -131,7 +131,7 @@ FC = @FC@
 FCFLAGS = @FCFLAGS@ @H5_FCFLAGS@
 FCFLAGS_f90 = @FCFLAGS_f90@
 FCLIBS = @FCLIBS@
-FFLAGS = @FFLAGS@
+FGREP = @FGREP@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
 GREP = @GREP@
@@ -155,6 +155,7 @@ INSTALL_PROGRAM = @INSTALL_PROGRAM@
 INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LD = @LD@
 LDFLAGS = @LDFLAGS@
 LIBOBJS = @LIBOBJS@
 LIBS = @LIBS@
@@ -167,6 +168,8 @@ MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
 MPI_GET_SIZE = @MPI_GET_SIZE@
+NM = @NM@
+NMEDIT = @NMEDIT@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
@@ -186,6 +189,7 @@ RUNSERIAL = @RUNSERIAL@
 R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
+SED = @SED@
 SETX = @SETX@
 SET_MAKE = @SET_MAKE@
 
@@ -216,7 +220,7 @@ abs_top_builddir = @abs_top_builddir@
 abs_top_srcdir = @abs_top_srcdir@
 ac_ct_CC = @ac_ct_CC@
 ac_ct_CXX = @ac_ct_CXX@
-ac_ct_F77 = @ac_ct_F77@
+ac_ct_DUMPBIN = @ac_ct_DUMPBIN@
 ac_ct_FC = @ac_ct_FC@
 am__include = @am__include@
 am__leading_dot = @am__leading_dot@
@@ -250,6 +254,7 @@ libdir = @libdir@
 libexecdir = @libexecdir@
 localedir = @localedir@
 localstatedir = @localstatedir@
+lt_ECHO = @lt_ECHO@
 mandir = @mandir@
 mkdir_p = @mkdir_p@
 oldincludedir = @oldincludedir@
@@ -443,8 +448,8 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonemtpy = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	mkid -fID $$unique
 tags: TAGS
 
@@ -469,8 +474,8 @@ TAGS: tags-recursive $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
 	  test -n "$$unique" || unique=$$empty_fix; \
 	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
@@ -480,13 +485,12 @@ ctags: CTAGS
 CTAGS: ctags-recursive $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
 	tags=; \
-	here=`pwd`; \
 	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	test -z "$(CTAGS_ARGS)$$tags$$unique" \
 	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique
diff --git a/fortran/examples/Makefile.in b/fortran/examples/Makefile.in
index e8fe92d..5715e88 100644
--- a/fortran/examples/Makefile.in
+++ b/fortran/examples/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.10 from Makefile.am.
+# Makefile.in generated by automake 1.10.1 from Makefile.am.
 # @configure_input@
 
 # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005, 2006  Free Software Foundation, Inc.
+# 2003, 2004, 2005, 2006, 2007, 2008  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -104,14 +104,14 @@ DEFAULT_API_VERSION = @DEFAULT_API_VERSION@
 DEFS = @DEFS@
 DEPDIR = @DEPDIR@
 DEPRECATED_SYMBOLS = @DEPRECATED_SYMBOLS@
+DSYMUTIL = @DSYMUTIL@
+DUMPBIN = @DUMPBIN@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
-ECHO = @ECHO@
 ECHO_C = @ECHO_C@
 ECHO_N = @ECHO_N@
 ECHO_T = @ECHO_T@
 EGREP = @EGREP@
 EXEEXT = @EXEEXT@
-F77 = @F77@
 
 # Make sure that these variables are exported to the Makefiles
 F9XMODEXT = @F9XMODEXT@
@@ -121,7 +121,7 @@ FC = @FC@
 FCFLAGS = @FCFLAGS@ @H5_FCFLAGS@
 FCFLAGS_f90 = @FCFLAGS_f90@
 FCLIBS = @FCLIBS@
-FFLAGS = @FFLAGS@
+FGREP = @FGREP@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
 GREP = @GREP@
@@ -145,6 +145,7 @@ INSTALL_PROGRAM = @INSTALL_PROGRAM@
 INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LD = @LD@
 LDFLAGS = @LDFLAGS@
 LIBOBJS = @LIBOBJS@
 LIBS = @LIBS@
@@ -157,6 +158,8 @@ MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
 MPI_GET_SIZE = @MPI_GET_SIZE@
+NM = @NM@
+NMEDIT = @NMEDIT@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
@@ -176,6 +179,7 @@ RUNSERIAL = @RUNSERIAL@
 R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
+SED = @SED@
 SETX = @SETX@
 SET_MAKE = @SET_MAKE@
 
@@ -206,7 +210,7 @@ abs_top_builddir = @abs_top_builddir@
 abs_top_srcdir = @abs_top_srcdir@
 ac_ct_CC = @ac_ct_CC@
 ac_ct_CXX = @ac_ct_CXX@
-ac_ct_F77 = @ac_ct_F77@
+ac_ct_DUMPBIN = @ac_ct_DUMPBIN@
 ac_ct_FC = @ac_ct_FC@
 am__include = @am__include@
 am__leading_dot = @am__leading_dot@
@@ -240,6 +244,7 @@ libdir = @libdir@
 libexecdir = @libexecdir@
 localedir = @localedir@
 localstatedir = @localstatedir@
+lt_ECHO = @lt_ECHO@
 mandir = @mandir@
 mkdir_p = @mkdir_p@
 oldincludedir = @oldincludedir@
diff --git a/fortran/src/Makefile.in b/fortran/src/Makefile.in
index 31baee2..a4145f4 100644
--- a/fortran/src/Makefile.in
+++ b/fortran/src/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.10 from Makefile.am.
+# Makefile.in generated by automake 1.10.1 from Makefile.am.
 # @configure_input@
 
 # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005, 2006  Free Software Foundation, Inc.
+# 2003, 2004, 2005, 2006, 2007, 2008  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -102,7 +102,7 @@ H5match_types_LDADD = $(LDADD)
 am_H5test_kind_OBJECTS = H5test_kind.$(OBJEXT)
 H5test_kind_OBJECTS = $(am_H5test_kind_OBJECTS)
 H5test_kind_LDADD = $(LDADD)
-DEFAULT_INCLUDES = -I. -I$(top_builddir)/src@am__isrc@
+DEFAULT_INCLUDES = -I.@am__isrc@ -I$(top_builddir)/src
 depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
 am__depfiles_maybe = depfiles
 COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
@@ -167,14 +167,14 @@ DEFAULT_API_VERSION = @DEFAULT_API_VERSION@
 DEFS = @DEFS@
 DEPDIR = @DEPDIR@
 DEPRECATED_SYMBOLS = @DEPRECATED_SYMBOLS@
+DSYMUTIL = @DSYMUTIL@
+DUMPBIN = @DUMPBIN@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
-ECHO = @ECHO@
 ECHO_C = @ECHO_C@
 ECHO_N = @ECHO_N@
 ECHO_T = @ECHO_T@
 EGREP = @EGREP@
 EXEEXT = @EXEEXT@
-F77 = @F77@
 
 # Make sure that these variables are exported to the Makefiles
 F9XMODEXT = @F9XMODEXT@
@@ -184,7 +184,7 @@ FC = @FC@
 FCFLAGS = @FCFLAGS@ @H5_FCFLAGS@
 FCFLAGS_f90 = @FCFLAGS_f90@
 FCLIBS = @FCLIBS@
-FFLAGS = @FFLAGS@
+FGREP = @FGREP@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
 GREP = @GREP@
@@ -208,6 +208,7 @@ INSTALL_PROGRAM = @INSTALL_PROGRAM@
 INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LD = @LD@
 LDFLAGS = @LDFLAGS@
 LIBOBJS = @LIBOBJS@
 LIBS = @LIBS@
@@ -220,6 +221,8 @@ MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
 MPI_GET_SIZE = @MPI_GET_SIZE@
+NM = @NM@
+NMEDIT = @NMEDIT@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
@@ -239,6 +242,7 @@ RUNSERIAL = @RUNSERIAL@
 R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
+SED = @SED@
 SETX = @SETX@
 SET_MAKE = @SET_MAKE@
 
@@ -269,7 +273,7 @@ abs_top_builddir = @abs_top_builddir@
 abs_top_srcdir = @abs_top_srcdir@
 ac_ct_CC = @ac_ct_CC@
 ac_ct_CXX = @ac_ct_CXX@
-ac_ct_F77 = @ac_ct_F77@
+ac_ct_DUMPBIN = @ac_ct_DUMPBIN@
 ac_ct_FC = @ac_ct_FC@
 am__include = @am__include@
 am__leading_dot = @am__leading_dot@
@@ -303,6 +307,7 @@ libdir = @libdir@
 libexecdir = @libexecdir@
 localedir = @localedir@
 localstatedir = @localstatedir@
+lt_ECHO = @lt_ECHO@
 mandir = @mandir@
 mkdir_p = @mkdir_p@
 oldincludedir = @oldincludedir@
@@ -483,8 +488,8 @@ install-libLTLIBRARIES: $(lib_LTLIBRARIES)
 	@list='$(lib_LTLIBRARIES)'; for p in $$list; do \
 	  if test -f $$p; then \
 	    f=$(am__strip_dir) \
-	    echo " $(LIBTOOL) --mode=install $(libLTLIBRARIES_INSTALL) $(INSTALL_STRIP_FLAG) '$$p' '$(DESTDIR)$(libdir)/$$f'"; \
-	    $(LIBTOOL) --mode=install $(libLTLIBRARIES_INSTALL) $(INSTALL_STRIP_FLAG) "$$p" "$(DESTDIR)$(libdir)/$$f"; \
+	    echo " $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(libLTLIBRARIES_INSTALL) $(INSTALL_STRIP_FLAG) '$$p' '$(DESTDIR)$(libdir)/$$f'"; \
+	    $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(libLTLIBRARIES_INSTALL) $(INSTALL_STRIP_FLAG) "$$p" "$(DESTDIR)$(libdir)/$$f"; \
 	  else :; fi; \
 	done
 
@@ -492,8 +497,8 @@ uninstall-libLTLIBRARIES:
 	@$(NORMAL_UNINSTALL)
 	@list='$(lib_LTLIBRARIES)'; for p in $$list; do \
 	  p=$(am__strip_dir) \
-	  echo " $(LIBTOOL) --mode=uninstall rm -f '$(DESTDIR)$(libdir)/$$p'"; \
-	  $(LIBTOOL) --mode=uninstall rm -f "$(DESTDIR)$(libdir)/$$p"; \
+	  echo " $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=uninstall rm -f '$(DESTDIR)$(libdir)/$$p'"; \
+	  $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=uninstall rm -f "$(DESTDIR)$(libdir)/$$p"; \
 	done
 
 clean-libLTLIBRARIES:
@@ -609,8 +614,8 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonemtpy = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	mkid -fID $$unique
 tags: TAGS
 
@@ -622,8 +627,8 @@ TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
 	  test -n "$$unique" || unique=$$empty_fix; \
 	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
@@ -633,13 +638,12 @@ ctags: CTAGS
 CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
 	tags=; \
-	here=`pwd`; \
 	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	test -z "$(CTAGS_ARGS)$$tags$$unique" \
 	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique
diff --git a/fortran/test/Makefile.in b/fortran/test/Makefile.in
index 5e0b92f..5fe17b9 100644
--- a/fortran/test/Makefile.in
+++ b/fortran/test/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.10 from Makefile.am.
+# Makefile.in generated by automake 1.10.1 from Makefile.am.
 # @configure_input@
 
 # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005, 2006  Free Software Foundation, Inc.
+# 2003, 2004, 2005, 2006, 2007, 2008  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -98,7 +98,7 @@ fortranlib_test_DEPENDENCIES = libh5test_fortran.la $(LIBH5TEST) \
 fortranlib_test_LINK = $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
 	--mode=link $(FCLD) $(fortranlib_test_FCFLAGS) $(FCFLAGS) \
 	$(AM_LDFLAGS) $(LDFLAGS) -o $@
-DEFAULT_INCLUDES = -I. -I$(top_builddir)/src@am__isrc@
+DEFAULT_INCLUDES = -I.@am__isrc@ -I$(top_builddir)/src
 depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
 am__depfiles_maybe = depfiles
 COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
@@ -160,14 +160,14 @@ DEFAULT_API_VERSION = @DEFAULT_API_VERSION@
 DEFS = @DEFS@
 DEPDIR = @DEPDIR@
 DEPRECATED_SYMBOLS = @DEPRECATED_SYMBOLS@
+DSYMUTIL = @DSYMUTIL@
+DUMPBIN = @DUMPBIN@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
-ECHO = @ECHO@
 ECHO_C = @ECHO_C@
 ECHO_N = @ECHO_N@
 ECHO_T = @ECHO_T@
 EGREP = @EGREP@
 EXEEXT = @EXEEXT@
-F77 = @F77@
 
 # Make sure that these variables are exported to the Makefiles
 F9XMODEXT = @F9XMODEXT@
@@ -177,7 +177,7 @@ FC = @FC@
 FCFLAGS = @FCFLAGS@ @H5_FCFLAGS@
 FCFLAGS_f90 = @FCFLAGS_f90@
 FCLIBS = @FCLIBS@
-FFLAGS = @FFLAGS@
+FGREP = @FGREP@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
 GREP = @GREP@
@@ -201,6 +201,7 @@ INSTALL_PROGRAM = @INSTALL_PROGRAM@
 INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LD = @LD@
 LDFLAGS = @LDFLAGS@
 LIBOBJS = @LIBOBJS@
 LIBS = @LIBS@
@@ -213,6 +214,8 @@ MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
 MPI_GET_SIZE = @MPI_GET_SIZE@
+NM = @NM@
+NMEDIT = @NMEDIT@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
@@ -232,6 +235,7 @@ RUNSERIAL = @RUNSERIAL@
 R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
+SED = @SED@
 SETX = @SETX@
 SET_MAKE = @SET_MAKE@
 
@@ -262,7 +266,7 @@ abs_top_builddir = @abs_top_builddir@
 abs_top_srcdir = @abs_top_srcdir@
 ac_ct_CC = @ac_ct_CC@
 ac_ct_CXX = @ac_ct_CXX@
-ac_ct_F77 = @ac_ct_F77@
+ac_ct_DUMPBIN = @ac_ct_DUMPBIN@
 ac_ct_FC = @ac_ct_FC@
 am__include = @am__include@
 am__leading_dot = @am__leading_dot@
@@ -296,6 +300,7 @@ libdir = @libdir@
 libexecdir = @libexecdir@
 localedir = @localedir@
 localstatedir = @localstatedir@
+lt_ECHO = @lt_ECHO@
 mandir = @mandir@
 mkdir_p = @mkdir_p@
 oldincludedir = @oldincludedir@
@@ -624,8 +629,8 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonemtpy = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	mkid -fID $$unique
 tags: TAGS
 
@@ -637,8 +642,8 @@ TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
 	  test -n "$$unique" || unique=$$empty_fix; \
 	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
@@ -648,13 +653,12 @@ ctags: CTAGS
 CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
 	tags=; \
-	here=`pwd`; \
 	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	test -z "$(CTAGS_ARGS)$$tags$$unique" \
 	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique
diff --git a/fortran/testpar/Makefile.in b/fortran/testpar/Makefile.in
index bc0df83..af4dfe6 100644
--- a/fortran/testpar/Makefile.in
+++ b/fortran/testpar/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.10 from Makefile.am.
+# Makefile.in generated by automake 1.10.1 from Makefile.am.
 # @configure_input@
 
 # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005, 2006  Free Software Foundation, Inc.
+# 2003, 2004, 2005, 2006, 2007, 2008  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -68,7 +68,7 @@ parallel_test_OBJECTS = $(am_parallel_test_OBJECTS)
 parallel_test_LDADD = $(LDADD)
 parallel_test_DEPENDENCIES = $(LIBH5FTEST) $(LIBH5TEST) $(LIBH5F) \
 	$(LIBHDF5)
-DEFAULT_INCLUDES = -I. -I$(top_builddir)/src@am__isrc@
+DEFAULT_INCLUDES = -I.@am__isrc@ -I$(top_builddir)/src
 FCCOMPILE = $(FC) $(AM_FCFLAGS) $(FCFLAGS)
 LTFCCOMPILE = $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
 	--mode=compile $(FC) $(AM_FCFLAGS) $(FCFLAGS)
@@ -117,14 +117,14 @@ DEFAULT_API_VERSION = @DEFAULT_API_VERSION@
 DEFS = @DEFS@
 DEPDIR = @DEPDIR@
 DEPRECATED_SYMBOLS = @DEPRECATED_SYMBOLS@
+DSYMUTIL = @DSYMUTIL@
+DUMPBIN = @DUMPBIN@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
-ECHO = @ECHO@
 ECHO_C = @ECHO_C@
 ECHO_N = @ECHO_N@
 ECHO_T = @ECHO_T@
 EGREP = @EGREP@
 EXEEXT = @EXEEXT@
-F77 = @F77@
 
 # Make sure that these variables are exported to the Makefiles
 F9XMODEXT = @F9XMODEXT@
@@ -134,7 +134,7 @@ FC = @FC@
 FCFLAGS = @FCFLAGS@ @H5_FCFLAGS@
 FCFLAGS_f90 = @FCFLAGS_f90@
 FCLIBS = @FCLIBS@
-FFLAGS = @FFLAGS@
+FGREP = @FGREP@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
 GREP = @GREP@
@@ -158,6 +158,7 @@ INSTALL_PROGRAM = @INSTALL_PROGRAM@
 INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LD = @LD@
 LDFLAGS = @LDFLAGS@
 LIBOBJS = @LIBOBJS@
 LIBS = @LIBS@
@@ -170,6 +171,8 @@ MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
 MPI_GET_SIZE = @MPI_GET_SIZE@
+NM = @NM@
+NMEDIT = @NMEDIT@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
@@ -189,6 +192,7 @@ RUNSERIAL = @RUNSERIAL@
 R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
+SED = @SED@
 SETX = @SETX@
 SET_MAKE = @SET_MAKE@
 
@@ -219,7 +223,7 @@ abs_top_builddir = @abs_top_builddir@
 abs_top_srcdir = @abs_top_srcdir@
 ac_ct_CC = @ac_ct_CC@
 ac_ct_CXX = @ac_ct_CXX@
-ac_ct_F77 = @ac_ct_F77@
+ac_ct_DUMPBIN = @ac_ct_DUMPBIN@
 ac_ct_FC = @ac_ct_FC@
 am__include = @am__include@
 am__leading_dot = @am__leading_dot@
@@ -253,6 +257,7 @@ libdir = @libdir@
 libexecdir = @libexecdir@
 localedir = @localedir@
 localstatedir = @localstatedir@
+lt_ECHO = @lt_ECHO@
 mandir = @mandir@
 mkdir_p = @mkdir_p@
 oldincludedir = @oldincludedir@
@@ -419,8 +424,8 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonemtpy = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	mkid -fID $$unique
 tags: TAGS
 
@@ -432,8 +437,8 @@ TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
 	  test -n "$$unique" || unique=$$empty_fix; \
 	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
@@ -443,13 +448,12 @@ ctags: CTAGS
 CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
 	tags=; \
-	here=`pwd`; \
 	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	test -z "$(CTAGS_ARGS)$$tags$$unique" \
 	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique