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authorMohamad Chaarawi <chaarawi@hdfgroup.org>2012-04-10 20:19:35 (GMT)
committerMohamad Chaarawi <chaarawi@hdfgroup.org>2012-04-10 20:19:35 (GMT)
commit45f6d4c1eed29c45476970a9703304378a5a1073 (patch)
tree667240a5ea57e8a072bc8ffb59ecb7281867164c /hl/fortran
parentad4b4b2b90c340bb408ddf32dd5cae780547bad2 (diff)
parent09fa6e9c54380362f6f283ad60daef679ec91b25 (diff)
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[svn-r22274] merge from trunk, resolve conflicts
Diffstat (limited to 'hl/fortran')
-rw-r--r--[-rwxr-xr-x]hl/fortran/COPYING0
-rw-r--r--[-rwxr-xr-x]hl/fortran/examples/run-hlfortran-ex.sh.in0
-rw-r--r--[-rwxr-xr-x]hl/fortran/src/H5DSfc.c4
-rw-r--r--[-rwxr-xr-x]hl/fortran/src/H5DSff.f900
-rw-r--r--[-rwxr-xr-x]hl/fortran/src/H5IMfc.c0
-rw-r--r--[-rwxr-xr-x]hl/fortran/src/H5IMff.f900
-rw-r--r--[-rwxr-xr-x]hl/fortran/src/H5LTf90proto.h3
-rw-r--r--[-rwxr-xr-x]hl/fortran/src/H5LTfc.c32
-rw-r--r--[-rwxr-xr-x]hl/fortran/src/H5LTff.f9016
-rw-r--r--[-rwxr-xr-x]hl/fortran/src/H5TBfc.c0
-rw-r--r--[-rwxr-xr-x]hl/fortran/src/H5TBff.f900
-rw-r--r--hl/fortran/src/Makefile.in2
-rw-r--r--hl/fortran/test/tstds.f9010
-rw-r--r--[-rwxr-xr-x]hl/fortran/test/tstimage.f900
-rw-r--r--hl/fortran/test/tstlite.f9053
-rw-r--r--[-rwxr-xr-x]hl/fortran/test/tsttable.f900
16 files changed, 79 insertions, 41 deletions
diff --git a/hl/fortran/COPYING b/hl/fortran/COPYING
index 6903daf..6903daf 100755..100644
--- a/hl/fortran/COPYING
+++ b/hl/fortran/COPYING
diff --git a/hl/fortran/examples/run-hlfortran-ex.sh.in b/hl/fortran/examples/run-hlfortran-ex.sh.in
index 2780bff..2780bff 100755..100644
--- a/hl/fortran/examples/run-hlfortran-ex.sh.in
+++ b/hl/fortran/examples/run-hlfortran-ex.sh.in
diff --git a/hl/fortran/src/H5DSfc.c b/hl/fortran/src/H5DSfc.c
index 6816347..3135cfa 100755..100644
--- a/hl/fortran/src/H5DSfc.c
+++ b/hl/fortran/src/H5DSfc.c
@@ -283,7 +283,7 @@ nh5dsget_label_c(hid_t_f *did, int_f *idx, _fcd label, size_t_f *size)
* Convert C name to FORTRAN and place it in the given buffer
*/
- HD5packFstring(c_label, _fcdtocp(label), (size_t)*size+1);
+ HD5packFstring(c_label, _fcdtocp(label), (size_t)*size);
done:
*size = (size_t_f)size_c; /* Don't subtract '1' because H5DSget_label doesn't include the
@@ -332,7 +332,7 @@ nh5dsget_scale_name_c(hid_t_f *did, _fcd name, size_t_f *size)
* Convert C name to FORTRAN and place it in the given buffer
*/
if(size_c != 0) {
- HD5packFstring(c_scale_name, _fcdtocp(name), (size_t)*size+1);
+ HD5packFstring(c_scale_name, _fcdtocp(name), (size_t)*size);
*size = (size_t_f)size_c-1; /* (-1) because we don't include the NULL ending in the length*/
} else {
*size = (size_t_f)size_c; /* if NULL then no name was found */
diff --git a/hl/fortran/src/H5DSff.f90 b/hl/fortran/src/H5DSff.f90
index c3ec587..c3ec587 100755..100644
--- a/hl/fortran/src/H5DSff.f90
+++ b/hl/fortran/src/H5DSff.f90
diff --git a/hl/fortran/src/H5IMfc.c b/hl/fortran/src/H5IMfc.c
index 818096e..818096e 100755..100644
--- a/hl/fortran/src/H5IMfc.c
+++ b/hl/fortran/src/H5IMfc.c
diff --git a/hl/fortran/src/H5IMff.f90 b/hl/fortran/src/H5IMff.f90
index d78dc06..d78dc06 100755..100644
--- a/hl/fortran/src/H5IMff.f90
+++ b/hl/fortran/src/H5IMff.f90
diff --git a/hl/fortran/src/H5LTf90proto.h b/hl/fortran/src/H5LTf90proto.h
index 205871c..8618fc6 100755..100644
--- a/hl/fortran/src/H5LTf90proto.h
+++ b/hl/fortran/src/H5LTf90proto.h
@@ -1140,7 +1140,8 @@ nh5ltget_attribute_string_c(hid_t_f *loc_id,
_fcd dsetname,
int_f *attrnamelen,
_fcd attrname,
- void *buf);
+ _fcd buf,
+ size_t_f *buf_size);
HDF5_HL_F90CSTUBDLL
int_f
diff --git a/hl/fortran/src/H5LTfc.c b/hl/fortran/src/H5LTfc.c
index c0b7695..674636d 100755..100644
--- a/hl/fortran/src/H5LTfc.c
+++ b/hl/fortran/src/H5LTfc.c
@@ -17,8 +17,7 @@
#include "H5LTprivate.h"
#include "H5LTf90proto.h"
-
-
+#include "H5Eprivate.h"
/*-------------------------------------------------------------------------
* Function: H5LTmake_dataset_c
@@ -1719,13 +1718,13 @@ nh5ltget_attribute_string_c(hid_t_f *loc_id,
_fcd dsetname,
int_f *attrnamelen,
_fcd attrname,
- void *buf)
+ _fcd buf, size_t_f *buf_size)
{
int ret_value = -1;
herr_t ret;
- hid_t c_loc_id;
char *c_name = NULL;
char *c_attrname = NULL;
+ char *c_buf = NULL;
int c_namelen;
int c_attrnamelen;
@@ -1741,26 +1740,33 @@ nh5ltget_attribute_string_c(hid_t_f *loc_id,
c_attrname = (char *)HD5f2cstring(attrname, c_attrnamelen);
if (c_attrname == NULL)
goto done;
-
/*
- * Call H5LTget_attribute_int function.
- */
- c_loc_id = (hid_t)*loc_id;
-
- ret = H5LTget_attribute_string(c_loc_id,c_name,c_attrname,buf);
+ * Allocate buffer to hold C attribute string
+ */
+ if ((c_buf = HDmalloc((size_t)*buf_size + 1)) == NULL)
+ goto done;
+ /*
+ * Call H5LTget_attribute_int function.
+ */
+ ret = H5LTget_attribute_string((hid_t)*loc_id,c_name,c_attrname,c_buf);
if (ret < 0)
goto done;
- ret_value = 0;
+ /*
+ * Convert C name to FORTRAN and place it in the given buffer
+ */
+ HD5packFstring(c_buf, _fcdtocp(buf), (size_t)*buf_size);
+ ret_value = 0;
done:
if(c_name!=NULL)
free(c_name);
if(c_attrname!=NULL)
free(c_attrname);
-
+ if(c_buf!=NULL)
+ free(c_buf);
return ret_value;
}
@@ -2157,7 +2163,7 @@ nh5ltpath_valid_c(hid_t_f *loc_id,
/*
* convert FORTRAN name to C name
*/
- if( NULL == (c_path = (char *)HD5f2cstring(path, (int)*pathlen)))
+ if( NULL == (c_path = (char *)HD5f2cstring(path, (size_t)*pathlen)))
goto done;
check_object_valid = FALSE;
diff --git a/hl/fortran/src/H5LTff.f90 b/hl/fortran/src/H5LTff.f90
index 7d53ab7..0302b61 100755..100644
--- a/hl/fortran/src/H5LTff.f90
+++ b/hl/fortran/src/H5LTff.f90
@@ -5969,9 +5969,10 @@ CONTAINS
CHARACTER(len=*), INTENT(inout) :: buf ! data buffer
INTEGER :: namelen ! name length
INTEGER :: attrlen ! name length
+ INTEGER(size_t) :: buf_size ! buf size
INTERFACE
- INTEGER FUNCTION h5ltget_attribute_string_c(loc_id,namelen,dset_name,attrlen,attr_name,buf)
+ INTEGER FUNCTION h5ltget_attribute_string_c(loc_id,namelen,dset_name,attrlen,attr_name,buf,buf_size)
USE h5global
!DEC$IF DEFINED(HDF5F90_WINDOWS)
!DEC$ATTRIBUTES C,reference,decorate,alias:'H5LTGET_ATTRIBUTE_STRING_C'::h5ltget_attribute_string_c
@@ -5984,12 +5985,15 @@ CONTAINS
CHARACTER(len=*), INTENT(in) :: dset_name ! name of the dataset
CHARACTER(len=*), INTENT(in) :: attr_name ! name of the attribute
CHARACTER(len=*), INTENT(inout) :: buf ! data buffer
+ INTEGER(size_t) :: buf_size ! data buffer size
END FUNCTION h5ltget_attribute_string_c
END INTERFACE
namelen = LEN(dset_name)
attrlen = LEN(attr_name)
- errcode = h5ltget_attribute_string_c(loc_id,namelen,dset_name,attrlen,attr_name,buf)
+ buf_size = LEN(buf)
+
+ errcode = h5ltget_attribute_string_c(loc_id,namelen,dset_name,attrlen,attr_name,buf,buf_size)
END SUBROUTINE h5ltget_attribute_string_f
@@ -6335,7 +6339,7 @@ CONTAINS
!DEC$attributes dllexport :: h5ltpath_valid_f
!DEC$endif
!
- INTEGER(hid_t) , INTENT(IN) :: loc_id ! File or group identifier.
+ INTEGER(hid_t) , INTENT(IN) :: loc_id ! An identifier of an object in the file.
CHARACTER(LEN=*), INTENT(IN) :: path ! Path to the object to check, relative to loc_id.
LOGICAL , INTENT(IN) :: check_object_valid ! Indicates whether to check if the final component
! of the path resolves to a valid object
@@ -6360,14 +6364,16 @@ CONTAINS
END FUNCTION h5ltpath_valid_c
END INTERFACE
+ ! Initialize
+ path_valid = .FALSE.
+ errcode = 0
+
check_object_valid_c = 0
IF(check_object_valid) check_object_valid_c = 1
pathlen = LEN(path)
status = h5ltpath_valid_c(loc_id, path, pathlen, check_object_valid_c)
- path_valid = .FALSE.
- errcode = 0
IF(status.EQ.1)THEN
path_valid = .TRUE.
ELSE IF(status.LT.0)THEN
diff --git a/hl/fortran/src/H5TBfc.c b/hl/fortran/src/H5TBfc.c
index 0efc9a8..0efc9a8 100755..100644
--- a/hl/fortran/src/H5TBfc.c
+++ b/hl/fortran/src/H5TBfc.c
diff --git a/hl/fortran/src/H5TBff.f90 b/hl/fortran/src/H5TBff.f90
index 36e13f9..36e13f9 100755..100644
--- a/hl/fortran/src/H5TBff.f90
+++ b/hl/fortran/src/H5TBff.f90
diff --git a/hl/fortran/src/Makefile.in b/hl/fortran/src/Makefile.in
index 62d7309..afefdc7 100644
--- a/hl/fortran/src/Makefile.in
+++ b/hl/fortran/src/Makefile.in
@@ -436,7 +436,7 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog
# Add libtool shared library version numbers to the HDF5 library
# See libtool versioning documentation online.
LT_VERS_INTERFACE = 6
-LT_VERS_REVISION = 102
+LT_VERS_REVISION = 104
LT_VERS_AGE = 0
INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/hl/src -I$(top_builddir)/hl/src \
-I$(top_srcdir)/fortran/src -I$(top_builddir)/fortran/src
diff --git a/hl/fortran/test/tstds.f90 b/hl/fortran/test/tstds.f90
index 8817989..c73e1c4 100644
--- a/hl/fortran/test/tstds.f90
+++ b/hl/fortran/test/tstds.f90
@@ -186,7 +186,10 @@ SUBROUTINE test_testds(err)
name_len = 25
name = ''
CALL H5DSget_scale_name_f(dsid, name, name_len, err)
- IF(err.LT.0.OR.name_len.NE.21.OR.TRIM(name).NE."Dimension Scale Set 1")THEN
+ IF(err.LT.0 .OR. &
+ name_len.NE.21 .OR. &
+ TRIM(name).NE."Dimension Scale Set 1" .OR. &
+ name(22:25).NE.' ')THEN
err = FAILED
CALL write_test_status(err)
RETURN
@@ -293,7 +296,10 @@ SUBROUTINE test_testds(err)
label_len = 25
label = ''
CALL H5DSget_label_f(did, DIM2, label, label_len, err)
- IF(err.LT.0.OR.label(1:label_len).NE."Label12".OR.label_len.NE.7)THEN
+ IF(err.LT.0.OR. &
+ label(1:label_len).NE."Label12" .OR. &
+ label_len.NE.7 .OR. &
+ label(8:25).NE.' ')THEN
err = FAILED
CALL write_test_status(err)
RETURN
diff --git a/hl/fortran/test/tstimage.f90 b/hl/fortran/test/tstimage.f90
index 3794bbf..3794bbf 100755..100644
--- a/hl/fortran/test/tstimage.f90
+++ b/hl/fortran/test/tstimage.f90
diff --git a/hl/fortran/test/tstlite.f90 b/hl/fortran/test/tstlite.f90
index 9329dba..0b5a138 100644
--- a/hl/fortran/test/tstlite.f90
+++ b/hl/fortran/test/tstlite.f90
@@ -1342,7 +1342,9 @@ SUBROUTINE test_attributes()
IMPLICIT NONE
CHARACTER(len=9), PARAMETER :: filename = "dsetf5.h5"! File name
+ CHARACTER(len=9), PARAMETER :: filename1 ="tattr.h5" ! C written attribute file
INTEGER(HID_T) :: file_id ! File identifier
+ INTEGER(HID_T) :: file_id1
INTEGER, PARAMETER :: DIM1 = 10; ! Dimension of array
CHARACTER(LEN=5), PARAMETER :: attrname1 = "attr1" ! Attribute name
CHARACTER(LEN=5), PARAMETER :: attrname2 = "attr2" ! Attribute name
@@ -1350,9 +1352,11 @@ SUBROUTINE test_attributes()
CHARACTER(LEN=5), PARAMETER :: attrname4 = "attr4" ! Attribute name
CHARACTER(LEN=5), PARAMETER :: attrname5 = "attr5" ! Attribute name
CHARACTER(LEN=8), PARAMETER :: buf1 = "mystring" ! Data buffer
+ CHARACTER(LEN=16), PARAMETER :: buf_c = "string attribute"
CHARACTER(LEN=8) :: bufr1 ! Data buffer
CHARACTER(LEN=10) :: bufr1_lg ! Data buffer
- CHARACTER(LEN=6) :: bufr1_sm ! Data buffer
+ CHARACTER(LEN=16) :: bufr_c ! Data buffer
+ CHARACTER(LEN=18) :: bufr_c_lg ! Data buffer
INTEGER, DIMENSION(DIM1) :: buf2 ! Data buffer
INTEGER, DIMENSION(DIM1) :: bufr2 ! Data buffer
REAL, DIMENSION(DIM1) :: buf3 ! Data buffer
@@ -1370,6 +1374,7 @@ SUBROUTINE test_attributes()
INTEGER :: rank = 1 ! Dataset rank
CHARACTER(LEN=5), PARAMETER :: dsetname1 = "dset1" ! Dataset name
INTEGER, DIMENSION(DIM1) :: buf ! Data buffer
+
!
! Initialize FORTRAN predefined datatypes.
@@ -1488,15 +1493,12 @@ SUBROUTINE test_attributes()
CALL passed()
-
-
!-------------------------------------------------------------------------
! string
!-------------------------------------------------------------------------
CALL test_begin(' Set/Get attributes string ')
-
!
! write attribute.
!
@@ -1530,19 +1532,36 @@ SUBROUTINE test_attributes()
STOP
ENDIF
- !
- ! read attribute into a fortran character buf that is smaller then buf1.
- !
- CALL h5ltget_attribute_string_f(file_id,dsetname1,attrname5,bufr1_sm,errcode)
-
- !
- ! compare read and write buffers.
- !
- IF ( buf1(1:6) .NE. bufr1_sm(1:6) ) THEN
- PRINT *, 'smaller read buffer differs from write buffer'
- PRINT *, buf1, ' and ', bufr1_sm
- STOP
- ENDIF
+ !
+ ! ** Test reading a string that was created with a C program **
+ !
+
+!!$ CALL h5fopen_f(filename1, H5F_ACC_RDONLY_F, file_id1, errcode)
+!!$
+!!$ CALL h5ltget_attribute_string_f(file_id1, "/", "attr5", bufr_c, errcode)
+!!$ !
+!!$ ! compare read and write buffers.
+!!$ !
+!!$ IF ( bufr_c .NE. buf_c ) THEN
+!!$ PRINT *, 'read buffer differs from write buffer'
+!!$ PRINT *, bufr1, ' and ', buf_c
+!!$ STOP
+!!$ ENDIF
+!!$ !
+!!$ ! read attribute into a fortran character buf that is larger then buf_c.
+!!$ !
+!!$ CALL h5ltget_attribute_string_f(file_id1, "/", "attr5", bufr_c_lg, errcode)
+!!$
+!!$ !
+!!$ ! compare read and write buffers, make sure C NULL character was removed.
+!!$ !
+!!$ IF ( buf_c(1:16) .NE. bufr_c_lg(1:16) .AND. bufr_c_lg(17:18) .NE. ' ' ) THEN
+!!$ PRINT *, 'larger read buffer differs from write buffer'
+!!$ PRINT *, buf_c, ' and ', bufr_c_lg
+!!$ STOP
+!!$ ENDIF
+
+!!$ CALL h5fclose_f(file_id1, errcode)
CALL passed()
diff --git a/hl/fortran/test/tsttable.f90 b/hl/fortran/test/tsttable.f90
index 66ec5c6..66ec5c6 100755..100644
--- a/hl/fortran/test/tsttable.f90
+++ b/hl/fortran/test/tsttable.f90