[svn-r24376] Updated all code to use HDmalloc, HDcalloc, and HDfree.

Prep work for adding a memory free function, part of HDFFV-8551.

Tested on:
    32-bit LE linux (jam) 
        * with C++, Fortran
        * with thread safety on

    These are minor changes (almost entirely renaming foo functions
    to HDfoo) that don't change functionality.  This should not
    require a full commit test.

7 files changed, 144 insertions, 163 deletions

diff --git a/hl/src/H5DS.c b/hl/src/H5DS.c
index 5f8cd50..06ce078 100644
--- a/hl/src/H5DS.c
+++ b/hl/src/H5DS.c
@@ -254,7 +254,7 @@ herr_t H5DSattach_scale(hid_t did,
             goto out;
 
         /* allocate and initialize the VL */
-        buf = (hvl_t *)malloc((size_t)rank * sizeof(hvl_t));
+        buf = (hvl_t *)HDmalloc((size_t)rank * sizeof(hvl_t));
         if(buf == NULL)
             goto out;
 
@@ -265,7 +265,7 @@ herr_t H5DSattach_scale(hid_t did,
 
         /* store the REF information in the index of the dataset that has the DS */
         buf[idx].len = 1;
-        buf[idx].p = malloc( 1 * sizeof(hobj_ref_t));
+        buf[idx].p = HDmalloc( 1 * sizeof(hobj_ref_t));
         ((hobj_ref_t *)buf[idx].p)[0] = ref_to_ds;
 
         /* write the attribute with the reference */
@@ -282,7 +282,7 @@ herr_t H5DSattach_scale(hid_t did,
         if(H5Aclose(aid) < 0)
             goto out;
 
-        free(buf);
+        HDfree(buf);
         buf = NULL;
     }
 
@@ -303,7 +303,7 @@ herr_t H5DSattach_scale(hid_t did,
             goto out;
 
         /* allocate and initialize the VL */
-        buf = (hvl_t *)malloc((size_t)rank * sizeof(hvl_t));
+        buf = (hvl_t *)HDmalloc((size_t)rank * sizeof(hvl_t));
         if(buf == NULL)
             goto out;
 
@@ -343,13 +343,13 @@ herr_t H5DSattach_scale(hid_t did,
             if(buf[idx].len > 0) {
                 buf[idx].len++;
                 len = buf[idx].len;
-                buf[idx].p = realloc(buf[idx].p, len * sizeof(hobj_ref_t));
+                buf[idx].p = HDrealloc(buf[idx].p, len * sizeof(hobj_ref_t));
                 ((hobj_ref_t *)buf[idx].p)[len - 1] = ref_to_ds;
             } /* end if */
             else {
                 /* store the REF information in the index of the dataset that has the DS */
                 buf[idx].len = 1;
-                buf[idx].p = malloc(sizeof(hobj_ref_t));
+                buf[idx].p = HDmalloc(sizeof(hobj_ref_t));
                 ((hobj_ref_t *)buf[idx].p)[0] = ref_to_ds;
             } /* end else */
         } /* end if */
@@ -367,7 +367,7 @@ herr_t H5DSattach_scale(hid_t did,
             goto out;
         if(H5Aclose(aid) < 0)
             goto out;
-        free(buf);
+        HDfree(buf);
         buf = NULL;
     } /* has_dimlist */
 
@@ -447,7 +447,7 @@ herr_t H5DSattach_scale(hid_t did,
 
         nelmts++;
 
-        dsbuf = (ds_list_t*) malloc((size_t)nelmts * sizeof(ds_list_t));
+        dsbuf = (ds_list_t*) HDmalloc((size_t)nelmts * sizeof(ds_list_t));
         if(dsbuf == NULL)
             goto out;
 
@@ -497,7 +497,7 @@ herr_t H5DSattach_scale(hid_t did,
         if (H5Tclose(ntid) < 0)
             goto out;
 
-        free(dsbuf);
+        HDfree(dsbuf);
         dsbuf = NULL;
     } /* has_reflist */
 
@@ -519,9 +519,9 @@ herr_t H5DSattach_scale(hid_t did,
     /* error zone */
 out:
     if(buf)
-        free(buf);
+        HDfree(buf);
     if(dsbuf)
-        free(dsbuf);
+        HDfree(dsbuf);
 
     H5E_BEGIN_TRY {
         H5Sclose(sid);
@@ -673,7 +673,7 @@ herr_t H5DSdetach_scale(hid_t did,
         goto out;
 
     /* allocate and initialize the VL */
-    buf = (hvl_t *)malloc((size_t)rank * sizeof(hvl_t));
+    buf = (hvl_t *)HDmalloc((size_t)rank * sizeof(hvl_t));
     if(buf == NULL)
         goto out;
 
@@ -718,7 +718,7 @@ herr_t H5DSdetach_scale(hid_t did,
                     ((hobj_ref_t *)buf[idx].p)[j] = ((hobj_ref_t *)buf[idx].p)[len-1]; 
                 len = --buf[idx].len;
                 if(len == 0) {
-                    free(buf[idx].p); 
+                    HDfree(buf[idx].p); 
                     buf[idx].p = NULL;
                 }
                 /* Since a reference to a dim. scale can be inserted only once, 
@@ -760,7 +760,7 @@ herr_t H5DSdetach_scale(hid_t did,
     if(H5Aclose(aid) < 0)
         goto out;
 
-    free(buf);
+    HDfree(buf);
     buf = NULL;
 
 
@@ -786,7 +786,7 @@ herr_t H5DSdetach_scale(hid_t did,
     if((nelmts = H5Sget_simple_extent_npoints(sid)) < 0)
         goto out;
 
-    dsbuf = (ds_list_t*) malloc((size_t)nelmts * sizeof(ds_list_t));
+    dsbuf = (ds_list_t*) HDmalloc((size_t)nelmts * sizeof(ds_list_t));
     if(dsbuf == NULL)
         goto out;
 
@@ -876,7 +876,7 @@ herr_t H5DSdetach_scale(hid_t did,
     if (H5Tclose(ntid) < 0)
         goto out;
 
-    free(dsbuf);
+    HDfree(dsbuf);
     dsbuf = NULL;
 
     return SUCCEED;
@@ -890,7 +890,7 @@ out:
         H5Tclose(tid);
 
         if(dsbuf) {
-            free(dsbuf);
+            HDfree(dsbuf);
             dsbuf = NULL;
         }
         if(buf) {
@@ -898,9 +898,9 @@ out:
                free the pointers allocated when we read data in */
             for(i = 0; i < rank; i++) {
                 if(buf[i].p)
-                    free(buf[i].p);
+                    HDfree(buf[i].p);
             }
-            free(buf);
+            HDfree(buf);
             buf = NULL;
         }
     } H5E_END_TRY;
@@ -1033,7 +1033,7 @@ htri_t H5DSis_attached(hid_t did,
             goto out;
 
         /* allocate and initialize the VL */
-        buf = (hvl_t*)malloc((size_t)rank * sizeof(hvl_t));
+        buf = (hvl_t*)HDmalloc((size_t)rank * sizeof(hvl_t));
         if(buf == NULL)
             goto out;
 
@@ -1079,7 +1079,7 @@ htri_t H5DSis_attached(hid_t did,
             goto out;
         if (H5Aclose(aid) < 0)
             goto out;
-        free(buf);
+        HDfree(buf);
         buf = NULL;
     } /* has_dimlist */
 
@@ -1116,7 +1116,7 @@ htri_t H5DSis_attached(hid_t did,
         if((nelmts = H5Sget_simple_extent_npoints(sid)) < 0)
             goto out;
 
-        dsbuf = (ds_list_t*) malloc((size_t)nelmts * sizeof(ds_list_t));
+        dsbuf = (ds_list_t*) HDmalloc((size_t)nelmts * sizeof(ds_list_t));
 
         if (dsbuf == NULL)
             goto out;
@@ -1170,7 +1170,7 @@ htri_t H5DSis_attached(hid_t did,
         if (H5Aclose(aid) < 0)
             goto out;
 
-        free(dsbuf);
+        HDfree(dsbuf);
         dsbuf = NULL;
     } /* has_reflist */
 
@@ -1189,11 +1189,11 @@ out:
     } H5E_END_TRY;
 
     if (buf) {
-        free(buf);
+        HDfree(buf);
         buf = NULL;
     }
     if(dsbuf) {
-        free(dsbuf);
+        HDfree(dsbuf);
         dsbuf = NULL;
     }
     return FAIL;
@@ -1317,7 +1317,7 @@ herr_t H5DSiterate_scales(hid_t did,
             goto out;
 
         /* allocate and initialize the VL */
-        buf = (hvl_t*)malloc((size_t)rank * sizeof(hvl_t));
+        buf = (hvl_t*)HDmalloc((size_t)rank * sizeof(hvl_t));
 
         if(buf == NULL)
             goto out;
@@ -1380,7 +1380,7 @@ herr_t H5DSiterate_scales(hid_t did,
         if (H5Aclose(aid) < 0)
             goto out;
 
-        free(buf);
+        HDfree(buf);
         buf = NULL;
     } /* if has_dimlist */
 
@@ -1390,7 +1390,7 @@ out:
     H5E_BEGIN_TRY {
         if(buf) {
             H5Dvlen_reclaim(tid,sid,H5P_DEFAULT,buf);
-            free(buf);
+            HDfree(buf);
         }
         H5Sclose(sid);
         H5Aclose(aid);
@@ -1489,7 +1489,7 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label)
             goto out;
 
         /* allocate and initialize */
-        buf = (const char **) malloc((size_t) rank * sizeof(char *));
+        buf = (const char **) HDmalloc((size_t) rank * sizeof(char *));
 
         if (buf == NULL)
             goto out;
@@ -1513,7 +1513,7 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label)
             goto out;
         if (buf)
         {
-            free(buf);
+            HDfree(buf);
             buf = NULL;
         }
     }
@@ -1532,7 +1532,7 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label)
             goto out;
 
         /* allocate and initialize */
-        buf = (const char **) malloc((size_t) rank * sizeof(char *));
+        buf = (const char **) HDmalloc((size_t) rank * sizeof(char *));
 
         if (buf == NULL)
             goto out;
@@ -1543,7 +1543,7 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label)
 
         /* free the ptr that will be replaced by label */
         if (buf[idx])
-            free((void *)buf[idx]);
+            HDfree((void *)buf[idx]);
 
         /* store the label information in the required index */
         buf[idx] = label;
@@ -1559,7 +1559,7 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label)
         for (i = 0; i < (unsigned int) rank; i++)
         {
             if (buf[i])
-                free((void *)buf[i]);
+                HDfree((void *)buf[i]);
         }
 
         /* close */
@@ -1569,7 +1569,7 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label)
             goto out;
         if (buf)
         {
-            free(buf);
+            HDfree(buf);
             buf = NULL;
         }
     }
@@ -1586,9 +1586,9 @@ out:
         for (i = 0; i < (unsigned int) rank; i++)
         {
             if (buf[i])
-                free((void *)buf[i]);
+                HDfree((void *)buf[i]);
         }
-        free(buf);
+        HDfree(buf);
     }
     H5E_BEGIN_TRY
     {
@@ -1692,7 +1692,7 @@ ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size)
         goto out;
 
     /* allocate and initialize */
-    buf = (char **) malloc((size_t) rank * sizeof(char *));
+    buf = (char **) HDmalloc((size_t) rank * sizeof(char *));
 
     if (buf == NULL)
         goto out;
@@ -1724,7 +1724,7 @@ ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size)
     for (i = 0; i < rank; i++)
     {
         if (buf[i])
-	  free(buf[i]);
+	  HDfree(buf[i]);
     }
 
     /* close */
@@ -1734,7 +1734,7 @@ ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size)
         goto out;
     if (buf)
     {
-        free(buf);
+        HDfree(buf);
         buf = NULL;
     }
 
@@ -1748,9 +1748,9 @@ out:
         for (i = 0; i < rank; i++)
         {
             if (buf[i])
-                free(buf[i]);
+                HDfree(buf[i]);
         }
-        free(buf);
+        HDfree(buf);
     }
     H5E_BEGIN_TRY
     {
@@ -1845,7 +1845,7 @@ ssize_t H5DSget_scale_name(hid_t did,
         goto out;
 
     /* allocate a temporary buffer */
-    buf = (char*)malloc(nbytes * sizeof(char));
+    buf = (char*)HDmalloc(nbytes * sizeof(char));
     if (buf == NULL)
         goto out;
 
@@ -1872,7 +1872,7 @@ ssize_t H5DSget_scale_name(hid_t did,
     if (H5Sclose(sid) < 0)
         goto out;
     if (buf)
-        free(buf);
+        HDfree(buf);
 
     return (ssize_t)(nbytes - 1);
 
@@ -1884,7 +1884,7 @@ out:
         H5Sclose(sid);
     } H5E_END_TRY;
     if (buf)
-        free(buf);
+        HDfree(buf);
     return FAIL;
 }
 
@@ -2052,7 +2052,7 @@ int H5DSget_num_scales(hid_t did,
             goto out;
 
         /* allocate and initialize the VL */
-        buf = (hvl_t *)malloc((size_t)rank * sizeof(hvl_t));
+        buf = (hvl_t *)HDmalloc((size_t)rank * sizeof(hvl_t));
         if(buf == NULL)
             goto out;
 
@@ -2071,7 +2071,7 @@ int H5DSget_num_scales(hid_t did,
             goto out;
         if(H5Aclose(aid) < 0)
             goto out;
-        free(buf);
+        HDfree(buf);
         buf = NULL;
     } /* has_dimlist */
 
@@ -2086,7 +2086,7 @@ out:
     } H5E_END_TRY;
 
     if(buf)
-        free(buf);
+        HDfree(buf);
 
     return FAIL;
 }
diff --git a/hl/src/H5HLprivate2.h b/hl/src/H5HLprivate2.h
index e2597db..1b67c70 100644
--- a/hl/src/H5HLprivate2.h
+++ b/hl/src/H5HLprivate2.h
@@ -22,44 +22,8 @@
 /* Public High-Level header */
 #include "hdf5_hl.h"
 
-/* The following is copied from src/H5private.h */
-
-/*
- * Status return values for the `herr_t' type.
- * Since some unix/c routines use 0 and -1 (or more precisely, non-negative
- * vs. negative) as their return code, and some assumption had been made in
- * the code about that, it is important to keep these constants the same
- * values.  When checking the success or failure of an integer-valued
- * function, remember to compare against zero and not one of these two
- * values.
- */
-#define SUCCEED		0
-#define FAIL		(-1)
-#define UFAIL		(unsigned)(-1)
-
-/* minimum of two, three, or four values */
-#undef MIN
-#define MIN(a,b)		(((a)<(b)) ? (a) : (b))
-#define MIN2(a,b)		MIN(a,b)
-#define MIN3(a,b,c)		MIN(a,MIN(b,c))
-#define MIN4(a,b,c,d)		MIN(MIN(a,b),MIN(c,d))
-
-/* maximum of two, three, or four values */
-#undef MAX
-#define MAX(a,b)		(((a)>(b)) ? (a) : (b))
-#define MAX2(a,b)		MAX(a,b)
-#define MAX3(a,b,c)		MAX(a,MAX(b,c))
-#define MAX4(a,b,c,d)		MAX(MAX(a,b),MAX(c,d))
-
-/*
- * HDF Boolean type.
- */
-#ifndef FALSE
-#   define FALSE 0
-#endif
-#ifndef TRUE
-#   define TRUE 1
-#endif
+/* HDF5 private functions */
+#include "H5private.h"
 
 #endif /* _H5HLprivate2_H */
 
diff --git a/hl/src/H5IM.c b/hl/src/H5IM.c
index e55aaf8..9c7c7e8 100644
--- a/hl/src/H5IM.c
+++ b/hl/src/H5IM.c
@@ -594,7 +594,7 @@ herr_t H5IMlink_palette( hid_t loc_id,
 
         dim_ref = n_refs + 1;
 
-        refbuf = (hobj_ref_t*)malloc( sizeof(hobj_ref_t) * (int)dim_ref );
+        refbuf = (hobj_ref_t*)HDmalloc( sizeof(hobj_ref_t) * (int)dim_ref );
 
         if ( H5Aread( aid, atid, refbuf ) < 0)
             goto out;
@@ -635,7 +635,7 @@ herr_t H5IMlink_palette( hid_t loc_id,
         if(H5Aclose(aid) < 0)
             goto out;
 
-        free( refbuf );
+        HDfree( refbuf );
 
     } /* ok_pal ==  1 */
 
@@ -901,7 +901,7 @@ herr_t H5IMget_palette_info( hid_t loc_id,
 
         dim_ref = n_refs;
 
-        refbuf = (hobj_ref_t*)malloc( sizeof(hobj_ref_t) * (int)dim_ref );
+        refbuf = (hobj_ref_t*)HDmalloc( sizeof(hobj_ref_t) * (int)dim_ref );
 
         if ( H5Aread( aid, atid, refbuf ) < 0)
             goto out;
@@ -930,7 +930,7 @@ herr_t H5IMget_palette_info( hid_t loc_id,
             goto out;
         if ( H5Aclose( aid ) < 0)
             goto out;
-        free( refbuf );
+        HDfree( refbuf );
 
 
     }
@@ -1012,7 +1012,7 @@ herr_t H5IMget_palette( hid_t loc_id,
 
         dim_ref = n_refs;
 
-        refbuf = (hobj_ref_t*)malloc( sizeof(hobj_ref_t) * (int)dim_ref );
+        refbuf = (hobj_ref_t*)HDmalloc( sizeof(hobj_ref_t) * (int)dim_ref );
 
         if ( H5Aread( aid, atid, refbuf ) < 0)
             goto out;
@@ -1034,7 +1034,7 @@ herr_t H5IMget_palette( hid_t loc_id,
             goto out;
         if ( H5Aclose( aid ) < 0)
             goto out;
-        free( refbuf );
+        HDfree( refbuf );
     }
 
     /* Close the image dataset. */
diff --git a/hl/src/H5LT.c b/hl/src/H5LT.c
index 98f2ff2..d175099 100644
--- a/hl/src/H5LT.c
+++ b/hl/src/H5LT.c
@@ -13,13 +13,12 @@
 * access to either file, you may request a copy from help@hdfgroup.org.     *
 * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-#include <string.h>
-#include <stdlib.h>
 #include <assert.h>
 #include <stdio.h>
+#include <stdlib.h>
+#include <string.h>
 
 #include "H5LTprivate.h"
-#include "H5private.h"
 
 /* For Lex and Yacc */
 #define         COL             3
diff --git a/hl/src/H5PT.c b/hl/src/H5PT.c
index 92b041a..071ae20 100644
--- a/hl/src/H5PT.c
+++ b/hl/src/H5PT.c
@@ -13,9 +13,12 @@
  * access to either file, you may request a copy from help@hdfgroup.org.     *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
+#include <stdlib.h>
+
 #include "H5PTprivate.h"
 #include "H5TBprivate.h"
-#include <stdlib.h>
+
+#define HDfree(X) free(X)
 
 /*  Packet Table private data */
 
@@ -33,6 +36,7 @@ static H5I_type_t H5PT_ptable_id_type = H5I_UNINIT;
 #define H5PT_HASH_TABLE_SIZE 64
 
 /* Packet Table private functions */
+static herr_t H5PT_free_id(void *id);
 static herr_t H5PT_close( htbl_t* table );
 static herr_t H5PT_create_index(htbl_t *table_id);
 static herr_t H5PT_set_index(htbl_t *table_id, hsize_t pt_index);
@@ -84,11 +88,11 @@ hid_t H5PTcreate_fl ( hid_t loc_id,
 
   /* Register the packet table ID type if this is the first table created */
   if(H5PT_ptable_id_type < 0)
-    if((H5PT_ptable_id_type = H5Iregister_type((size_t)H5PT_HASH_TABLE_SIZE, 0, (H5I_free_t)free)) < 0)
+    if((H5PT_ptable_id_type = H5Iregister_type((size_t)H5PT_HASH_TABLE_SIZE, 0, (H5I_free_t)H5PT_free_id)) < 0)
       goto out;
 
   /* Get memory for the table identifier */
-  table = (htbl_t *)malloc(sizeof(htbl_t));
+  table = (htbl_t *)HDmalloc(sizeof(htbl_t));
 
   /* Create a simple data space with unlimited size */
   dims[0] = 0;
@@ -142,7 +146,7 @@ hid_t H5PTcreate_fl ( hid_t loc_id,
     H5Pclose(plist_id);
     H5Dclose(dset_id);
     if(table)
-      free(table);
+      HDfree(table);
     H5E_END_TRY
     return H5I_INVALID_HID;
 }
@@ -232,10 +236,10 @@ hid_t H5PTopen( hid_t loc_id,
 
   /* Register the packet table ID type if this is the first table created */
   if( H5PT_ptable_id_type < 0)
-    if((H5PT_ptable_id_type = H5Iregister_type((size_t)H5PT_HASH_TABLE_SIZE, 0, (H5I_free_t)free)) < 0)
+    if((H5PT_ptable_id_type = H5Iregister_type((size_t)H5PT_HASH_TABLE_SIZE, 0, (H5I_free_t)H5PT_free_id)) < 0)
       goto out;
 
-  table = (htbl_t *)malloc(sizeof(htbl_t));
+  table = (htbl_t *)HDmalloc(sizeof(htbl_t));
 
   if ( table == NULL ) {
     goto out;
@@ -291,12 +295,26 @@ out:
   {
     H5Dclose(table->dset_id);
     H5Tclose(table->type_id);
-    free(table);
+    HDfree(table);
   }
   H5E_END_TRY
   return H5I_INVALID_HID;
 }
 
+/*-------------------------------------------------------------------------
+ * Function: H5PT_free_id
+ *
+ * Purpose: Free an id.  Callback for H5Iregister_type.
+ *
+ * Return: Success: 0, Failure: N/A
+ *-------------------------------------------------------------------------
+ */
+static herr_t
+H5PT_free_id(void *id)
+{
+    HDfree(id);
+    return 0;
+}
 
 /*-------------------------------------------------------------------------
  * Function: H5PT_close
@@ -331,7 +349,7 @@ H5PT_close( htbl_t* table)
   if(H5Tclose(table->type_id) < 0)
     goto out;
 
-  free(table);
+  HDfree(table);
 
   return 0;
 
@@ -342,7 +360,7 @@ out:
     H5Dclose(table->dset_id);
     H5Tclose(table->type_id);
     H5E_END_TRY
-    free(table);
+    HDfree(table);
   }
   return -1;
 }
diff --git a/hl/src/H5TB.c b/hl/src/H5TB.c
index 0b6305b..1547e00 100644
--- a/hl/src/H5TB.c
+++ b/hl/src/H5TB.c
@@ -15,7 +15,7 @@
 
 #include <stdlib.h>
 #include <string.h>
-#include "H5private.h"
+
 #include "H5LTprivate.h"
 #include "H5TBprivate.h"
 
@@ -196,7 +196,7 @@ herr_t H5TBmake_table( const char *table_title,
         if (H5LTset_attribute_string( loc_id, dset_name, attr_name, member_name ) < 0)
             goto out;
 
-        free( member_name );
+        HDfree( member_name );
 
     }
 
@@ -234,7 +234,7 @@ herr_t H5TBmake_table( const char *table_title,
             if (H5Aclose(attr_id) < 0)
                 goto out;
 
-            free(member_name);
+            HDfree(member_name);
         }
 
         /* terminate access to the data space. */
@@ -570,7 +570,7 @@ herr_t H5TBwrite_fields_name( hid_t loc_id,
                 goto out;
         }
 
-        free( member_name );
+        HDfree( member_name );
 
     }
 
@@ -734,7 +734,7 @@ herr_t H5TBwrite_fields_index( hid_t loc_id,
         if(H5Tclose( nmtype_id ) < 0)
             goto out;
 
-        free( member_name );
+        HDfree( member_name );
 
     }
 
@@ -1059,7 +1059,7 @@ herr_t H5TBread_fields_name( hid_t loc_id,
                 goto out;
             j++;
         }
-        free( member_name );
+        HDfree( member_name );
     }
 
     /* get the dataspace handle */
@@ -1221,7 +1221,7 @@ herr_t H5TBread_fields_index( hid_t loc_id,
         if (H5Tclose( nmtype_id ) < 0)
             goto out;
 
-        free( member_name );
+        HDfree( member_name );
     }
 
     /* get the dataspace handle */
@@ -1328,9 +1328,9 @@ herr_t H5TBdelete_record( hid_t loc_id,
     if (H5TBget_table_info ( loc_id, dset_name, &nfields, &ntotal_records ) < 0)
         goto out;
 
-    if(NULL == (src_offset = (size_t *)malloc((size_t)nfields * sizeof(size_t))))
+    if(NULL == (src_offset = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t))))
         goto out;
-    if(NULL == (src_sizes = (size_t *)malloc((size_t)nfields * sizeof(size_t))))
+    if(NULL == (src_sizes = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t))))
         goto out;
 
     /* get field info */
@@ -1351,7 +1351,7 @@ herr_t H5TBdelete_record( hid_t loc_id,
 
     if ( read_nrecords )
     {
-        if(NULL == (tmp_buf = (unsigned char *)calloc((size_t) read_nrecords, src_size )))
+        if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t) read_nrecords, src_size )))
             goto out;
 
         /* read the records after the deleted one(s) */
@@ -1415,22 +1415,22 @@ herr_t H5TBdelete_record( hid_t loc_id,
         goto out;
 
     if(tmp_buf)
-        free(tmp_buf);
+        HDfree(tmp_buf);
     if(src_offset)
-        free(src_offset);
+        HDfree(src_offset);
     if(src_sizes)
-        free(src_sizes);
+        HDfree(src_sizes);
 
     return 0;
 
     /* error zone */
 out:
     if(tmp_buf)
-        free(tmp_buf);
+        HDfree(tmp_buf);
     if(src_offset)
-        free(src_offset);
+        HDfree(src_offset);
     if(src_sizes)
-        free(src_sizes);
+        HDfree(src_sizes);
     H5E_BEGIN_TRY
     {
         H5Tclose(mem_type_id);
@@ -1509,7 +1509,7 @@ herr_t H5TBinsert_record( hid_t loc_id,
         goto out;
 
     read_nrecords = ntotal_records - start;
-    tmp_buf = (unsigned char *)calloc((size_t) read_nrecords, type_size);
+    tmp_buf = (unsigned char *)HDcalloc((size_t) read_nrecords, type_size);
 
     /* read the records after the inserted one(s) */
     if (H5TBread_records( loc_id, dset_name, start, read_nrecords, type_size, field_offset, field_sizes, tmp_buf ) < 0)
@@ -1585,7 +1585,7 @@ herr_t H5TBinsert_record( hid_t loc_id,
     if (H5Dclose( did ) < 0)
         return -1;
 
-    free( tmp_buf );
+    HDfree( tmp_buf );
 
     return 0;
 
@@ -1652,9 +1652,9 @@ herr_t H5TBadd_records_from( hid_t loc_id,
     if (H5TBget_table_info ( loc_id, dset_name1, &nfields, &ntotal_records ) < 0)
         goto out;
 
-    if(NULL == (src_offset = (size_t *)malloc((size_t)nfields * sizeof(size_t))))
+    if(NULL == (src_offset = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t))))
         goto out;
-    if(NULL == (src_sizes  = (size_t *)malloc((size_t)nfields * sizeof(size_t))))
+    if(NULL == (src_sizes  = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t))))
         goto out;
 
     /* get field info */
@@ -1682,7 +1682,7 @@ herr_t H5TBadd_records_from( hid_t loc_id,
     if (( type_size1 = H5Tget_size( tid_1 )) == 0 )
         goto out;
 
-    if(NULL == (tmp_buf = (unsigned char *)calloc((size_t)nrecords, type_size1 )))
+    if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, type_size1 )))
         goto out;
 
     /* define a hyperslab in the dataset of the size of the records */
@@ -1721,22 +1721,22 @@ herr_t H5TBadd_records_from( hid_t loc_id,
         goto out;
 
     if(tmp_buf)
-        free(tmp_buf);
+        HDfree(tmp_buf);
     if(src_offset)
-        free(src_offset);
+        HDfree(src_offset);
     if(src_sizes)
-        free(src_sizes);
+        HDfree(src_sizes);
 
     return 0;
 
     /* error zone */
 out:
     if(tmp_buf)
-        free(tmp_buf);
+        HDfree(tmp_buf);
     if(src_offset)
-        free(src_offset);
+        HDfree(src_offset);
     if(src_sizes)
-        free(src_sizes);
+        HDfree(src_sizes);
     H5E_BEGIN_TRY
     {
         H5Dclose(did_1);
@@ -1998,7 +1998,7 @@ herr_t H5TBcombine_tables(hid_t loc_id1,
     did_1 = H5I_BADID;
 
     /* Release resources. */
-    free(tmp_buf);
+    HDfree(tmp_buf);
     tmp_buf = NULL;
 
     /*-------------------------------------------------------------------------
@@ -2100,13 +2100,13 @@ herr_t H5TBcombine_tables(hid_t loc_id1,
 
 out:
     if(tmp_buf)
-        free(tmp_buf);
+        HDfree(tmp_buf);
     if(tmp_fill_buf)
-        free(tmp_fill_buf);
+        HDfree(tmp_fill_buf);
     if(src_offset)
-        free(src_offset);
+        HDfree(src_offset);
     if(src_sizes)
-        free(src_sizes);
+        HDfree(src_sizes);
 
     H5E_BEGIN_TRY {
         if(member_type_id > 0)
@@ -2254,7 +2254,7 @@ herr_t H5TBinsert_field( hid_t loc_id,
         goto out;
 
     /* alloc fill value attribute buffer */
-    tmp_fill_buf = (unsigned char *)malloc(total_size );
+    tmp_fill_buf = (unsigned char *)HDmalloc(total_size );
 
     /* get the fill value attributes */
     if ((H5TBAget_fill( loc_id, dset_name, did_1, tmp_fill_buf )) < 0)
@@ -2314,7 +2314,7 @@ herr_t H5TBinsert_field( hid_t loc_id,
 
         curr_offset += member_size;
 
-        free( member_name );
+        HDfree( member_name );
 
         /* close the member type */
         if(H5Tclose( member_type_id ) < 0)
@@ -2349,7 +2349,7 @@ herr_t H5TBinsert_field( hid_t loc_id,
     *-------------------------------------------------------------------------
     */
 
-    tmp_buf = (unsigned char *)calloc((size_t)nrecords, (size_t)total_size);
+    tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, (size_t)total_size);
 
     /* define a hyperslab in the dataset of the size of the records */
     offset[0] = 0;
@@ -2557,8 +2557,8 @@ herr_t H5TBinsert_field( hid_t loc_id,
         goto out;
 
     /* release resources. */
-    free ( tmp_buf );
-    free ( tmp_fill_buf );
+    HDfree ( tmp_buf );
+    HDfree ( tmp_fill_buf );
 
     return 0;
 
@@ -2694,13 +2694,13 @@ herr_t H5TBdelete_field( hid_t loc_id,
             if (H5Tclose( member_type_id ) < 0)
                 goto out;
 
-            free( member_name );
+            HDfree( member_name );
 
             break;
 
         }
 
-        free( member_name );
+        HDfree( member_name );
 
     } /* i */
 
@@ -2722,7 +2722,7 @@ herr_t H5TBdelete_field( hid_t loc_id,
     curr_offset = 0;
 
     /* alloc fill value attribute buffer */
-    tmp_fill_buf = (unsigned char *)malloc((size_t) type_size2 );
+    tmp_fill_buf = (unsigned char *)HDmalloc((size_t) type_size2 );
 
     /*-------------------------------------------------------------------------
     * get attributes from previous table in the process
@@ -2742,7 +2742,7 @@ herr_t H5TBdelete_field( hid_t loc_id,
         /* we want to skip the field to delete */
         if (H5TB_find_field( member_name, field_name ) > 0 )
         {
-            free( member_name );
+            HDfree( member_name );
             continue;
         }
 
@@ -2780,7 +2780,7 @@ herr_t H5TBdelete_field( hid_t loc_id,
 
         curr_offset += member_size;
 
-        free(member_name);
+        HDfree(member_name);
 
         /* close the member type */
         if (H5Tclose(member_type_id) < 0)
@@ -2821,7 +2821,7 @@ herr_t H5TBdelete_field( hid_t loc_id,
         /* skip the field to delete */
         if (H5TB_find_field(member_name, field_name) > 0)
         {
-            free(member_name);
+            HDfree(member_name);
             continue;
         }
 
@@ -2840,7 +2840,7 @@ herr_t H5TBdelete_field( hid_t loc_id,
         if (H5Tinsert( read_type_id, member_name, (size_t)0, member_type_id ) < 0)
             goto out;
 
-        tmp_buf = (unsigned char *)calloc((size_t) nrecords, member_size );
+        tmp_buf = (unsigned char *)HDcalloc((size_t) nrecords, member_size );
 
         /* read */
         if (H5Dread( did_1, read_type_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, tmp_buf ) < 0)
@@ -2881,8 +2881,8 @@ herr_t H5TBdelete_field( hid_t loc_id,
             goto out;
 
         /* release resources. */
-        free( member_name );
-        free ( tmp_buf );
+        HDfree( member_name );
+        HDfree ( tmp_buf );
 
     } /* i */
 
@@ -3007,7 +3007,7 @@ herr_t H5TBdelete_field( hid_t loc_id,
         goto out;
 
     /* Release resources. */
-    free ( tmp_fill_buf );
+    HDfree ( tmp_fill_buf );
 
     return 0;
 
@@ -3101,7 +3101,7 @@ htri_t H5TBAget_fill(hid_t loc_id,
     if (H5TBget_table_info ( loc_id, dset_name, &nfields, &nrecords ) < 0)
         return -1;
 
-    src_offset = (size_t *)malloc((size_t)nfields * sizeof(size_t));
+    src_offset = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t));
 
     if (src_offset == NULL )
         return -1;
@@ -3130,12 +3130,12 @@ htri_t H5TBAget_fill(hid_t loc_id,
 
     }
 
-    free( src_offset );
+    HDfree( src_offset );
 
     return has_fill;
 
 out:
-    free( src_offset );
+    HDfree( src_offset );
     return -1;
 
 }
@@ -3306,7 +3306,7 @@ herr_t H5TBget_field_info( hid_t loc_id,
 
             member_name = H5Tget_member_name(tid, (unsigned)i);
             strcpy(field_names[i], member_name);
-            free(member_name);
+            HDfree(member_name);
         } /* end if */
 
         /* get the member type */
@@ -3459,7 +3459,7 @@ herr_t H5TB_attach_attributes( const char *table_title,
         if (H5LTset_attribute_string( loc_id, dset_name, attr_name, member_name ) < 0)
             goto out;
 
-        free( member_name );
+        HDfree( member_name );
 
     }
 
@@ -3508,14 +3508,14 @@ hid_t H5TB_create_type(hid_t loc_id,
     if (H5TBget_table_info(loc_id,dset_name,&nfields,NULL) < 0)
         return -1;
 
-    if ((fnames = (char**) malloc(sizeof(char*)*(size_t)nfields))==NULL)
+    if ((fnames = (char**) HDmalloc(sizeof(char*)*(size_t)nfields))==NULL)
         return -1;
 
     for ( i = 0; i < nfields; i++)
     {
-        if ((fnames[i] = (char*) malloc(sizeof(char)*HLTB_MAX_FIELD_LEN))==NULL)
+        if ((fnames[i] = (char*) HDmalloc(sizeof(char)*HLTB_MAX_FIELD_LEN))==NULL)
         {
-            free(fnames);
+            HDfree(fnames);
             return -1;
         }
     }
@@ -3551,9 +3551,9 @@ hid_t H5TB_create_type(hid_t loc_id,
 
     for ( i=0; i<nfields; i++)
     {
-        free (fnames[i]);
+        HDfree (fnames[i]);
     }
-    free (fnames);
+    HDfree (fnames);
 
     return mem_type_id;
 
@@ -3567,10 +3567,10 @@ out:
     for ( i=0; i<nfields; i++)
     {
         if (fnames[i])
-            free (fnames[i]);
+            HDfree (fnames[i]);
     }
     if (fnames)
-        free (fnames);
+        HDfree (fnames);
     return -1;
 
 }
diff --git a/hl/src/hdf5_hl.h b/hl/src/hdf5_hl.h
index 4643932..e9e3bf1 100644
--- a/hl/src/hdf5_hl.h
+++ b/hl/src/hdf5_hl.h
@@ -27,7 +27,7 @@
 #include "H5LTpublic.h" /* lite */
 #include "H5IMpublic.h" /* image */
 #include "H5TBpublic.h" /* table */
-#include "H5PTpublic.h" /* table */
+#include "H5PTpublic.h" /* packet table */
 
 #endif /*H5_INCLUDE_HL*/