diff options
author | Larry Knox <lrknox@hdfgroup.org> | 2021-02-08 16:56:16 (GMT) |
---|---|---|
committer | GitHub <noreply@github.com> | 2021-02-08 16:56:16 (GMT) |
commit | 22c67ff6570f16050f0a5654cf1c84df917bb598 (patch) | |
tree | 38fb63aa498b250c2543fe7e22a511706de96a42 /hl/src | |
parent | 551f15f8ae02ca9c995619b216121081eb07633e (diff) | |
download | hdf5-22c67ff6570f16050f0a5654cf1c84df917bb598.zip hdf5-22c67ff6570f16050f0a5654cf1c84df917bb598.tar.gz hdf5-22c67ff6570f16050f0a5654cf1c84df917bb598.tar.bz2 |
1.8/master (#317)hdf5-1_8_22
* Revert incorrect bool type
* Correct grep text for filter test
* Check sizeof type to use correct ref_type
* h5dump reg ref chnages has no error file
* Fix comment
* Remove unneeded files
* Verify the decoded version for "all" and "none" selection.
* Remove double entry
* Add missing include
* Snapshot version 1.8 release 22 (snap4)
Update version to 1.8-snap5
* Fixes for test failures with --disable-tests --disable-tools options.
Don't test ph5diff if tests are disabled.
* Correct conditions for parallel builds with and without tests.
* Snapshot version 1.8 release 22 (snap5)
Update version to 1.8.22-snap6
* TRILAB-192 merging warnings changes from develop
* Autotools reconfigure update
* Restore page ejects.
* Restore page eject chars
* Fix orphaned token
* Update LT files
* Correct extra flags and merge TRILAB-24
* Update release note for CMake warnings
* H5repack bug fixes from develop
* TRILAB-192 - merge changes from develop
Single source, config files, for warnings for both autotools and CMake.
Update CMake libraries, tools, tests to use correct flags.
* Add missing m4 file
* Remove 128bit config check fo 1.8
* TRILAB-192 update LTparse files
* A fix in the cleaning up code for datatype when datatype initialization via H5D__init_type() fails.
The code to fix the problem is the same as what is done in H5D__open_oid().
* Add missing " and update function calls incorrectly
named load_gcc_arguments.
Commit changes to gnu-cxxflags to remove unmatched " and to gnu-fflags
to not add C warnings flags to H5_FCFLAGS.
* TRILAB-192 - cleanup edits and match CMake CXX to autotools
* Fix shadowed type
* TRILAB-192 correct fortran commands
* TRILAB-192 version of std=f2008 special check
* Fix shadow variable
* Add prefix_relto_examplesdir function to set relative path to h5c++.
* TRILAB-192 - parser files cannot handle this warning
* Parallel Fortran tests now use the MPI module instead of including
mpif.h.
* Don't add general warnings flags for unsupported old versions of gcc and
g++ (older than gcc/g++ 4.2).
Correct gnu-cxxflags to determine warnings flags to be added based on
C++ compiler version instead of C compiler version.
* Snapshot version 1.8 release 22 (snap6)
Update version to 1.8.22-snap7
* TRILAB-244 separate CXX warnings and errors from C
* Fix NoFilter build
* Move ADD_H5_FLAGS macro from *CompilerFlags.cmake files to
config/cmake_ext_mod/HDFMacros.cmake for common use.
* Restrict errors to gcc 4.8 and above.
* OESS-65 replace szip with aec szip
* Correct CMake version
* Correct -Werror=unused-variable
* Add -Werror= flags to lists displayed in libhdf5.settings.
* Fix -Werror=unused-variable
* More fixes for unused variable
* Resolve warning errors from -Werror= flags:
-Werror=bad-function-cast
-Werror=bad-function-cast
-Werror=implicit-function-declaration
-Werror=nested-externs
* Remove verbose assignments in smoke_check 3 and 5 functions.
* Update to use optimization flags, C++ error flags, and correct
libhdf5.settings.in to remove unworkable changes.
* Update config/gnu-cxxflags.
* Add missing headers
* Fix ifort warning flag.
Restore AC_DEFUN([PAC_PROG_FC_DEFAULT_REALisDBLE] in m4/aclocal_fc.m4.
Add --enable-symbols, --enable-profiling, and --enable-optimization
options to autotools configure; all configure flags for
--enable-production and --disable-production should match HDF5 1.10 and
1.12 production and debug default flags.
* Add github actions file
* Correct path
* OESS-65 Fix packaging
* Update reference name
* Correct filename
* disable pr action and enable fail fast
* Snapshot 1.8.22-snap7
Update version to 1.8.22-snap8.
* Correct mingw path
* Correct mingw paths
* Revise gnu-*flags and cmake/HDF*CompilerFlags.cmake files to add warning
flags for GCC compilers version 4.8 and above.
Removed files from gnu-warnings that only apply to versions < 4.8.
Consolidated warnings from versions < 4.8 that apply to versions >= 4.8
into the 4.8 warnings files.
* Update MANIFEST for removal of older warnings files.
* Yanked all MPI-1 calls
Added batch scripts in bin/batch.
* Snapshot 1.8.22-snap8.
Update version to 1.8.22-snap9.
* Squashed commit of the following:
commit 45b0cbc71929930a874e1c09e0770aa64d0ae697
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Thu Apr 23 13:14:56 2020 -0500
Add C++ warnings treated as error for autotools builds.
commit 6debcddcc766601799d5bd661bd60946f951a07e
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Fri Jun 19 16:50:03 2020 -0500
Remove tests for develop branch from testh5cc.sh.in.
Add @H5_ECXXFLAGS@ to AM_CXXFLAGS.
commit fed497e7f207313b2a133d3b68c942b7d7104b90
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Fri Jun 12 15:06:39 2020 -0500
Merge pull request #2646 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit '998c6470d78e14228695419c3b514c35ecf3d69e':
Remove unnecessary version conditions for Clang compilers.
commit 92e52ce5c211bd1d3991a3b8bb67287ac7b652aa
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Wed Jun 10 18:53:45 2020 -0500
Merge pull request #2639 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit 'a33667faf226f5d8c9633bf537893e8fce1bf1f6':
Add c++ to --enable-sanitize-checks option.
commit 2e802534fb997b81fa98fdd1c7d97d4310898e0d
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Wed Jun 10 15:18:36 2020 -0500
Merge pull request #2633 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit '20eab963899841c9a003baebead8e3bc07d9e127':
Remove duplicate entries in MANIFEST.
Make changes to CMake CompilerFlags.cmake files so extra flags are loaded for non-GNU compilers.
Update new clang files to not pick up clang as vendor for pgCC. Add new files to MANIFEST Temporary demotion of 2 -Werror warning flags that fail on macos 10.12 Remove Production flag unknown to Apple clang.
commit 96ef60a58a23847a7da89a891f2415055ec2ab60
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Mon Jun 8 16:24:49 2020 -0500
Merge pull request #2631 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit 'b942a4d8a3e27317cac50ce37ff5302d477664d8':
Clean up code to get clang version in config/linux-gnulibc1
commit 8a7c687da568e8b50b38fa53da1ca63759be6ec4
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Mon Jun 8 11:42:37 2020 -0500
Merge pull request #2623 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit 'c7626f79fdee4eee13925e240ef41e61f3367eab':
Add flags from config/clang-warnings/*general files to H5 C and CXX flags for all versions of Clang and Clang++ compilers. Switched from cut to awk in testcheck_version.sh.in to avoid dependence on tab vs. " " in version definitions in H5public.h.
Add files for adding warning flags for clang compilers in autotools configure.
commit db3ef7ff3c1ed79167cecef831501411cff8291f
Merge: 5a0f8d7 f9f1310
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Fri Jun 19 14:46:22 2020 -0500
Merge branch 'hdf5_1_12' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_12
commit 5a0f8d7940ae57b445f545a0abd7e303ce6924ee
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Wed Jun 10 20:15:41 2020 -0500
Merge pull request #2636 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:HDFFV-11000-update-testh5cc.sh.in-for-version to develop
* commit '5c0bd670d6e9919c463fbc05de99e2ba55b0761e':
Add tests for all version to H5_NO_DEPRECATED_SYMBOLS section and to section for current version, with and without default API version flags.
HDFFV-11000: update-testh5cc.sh.in to test sample versioned functions in HDF5 1.10, 1.12 and develop.
* Update configure and Makefile.ins after bin/reconfigure.
* Fix MANIFEST
* Fix HDFFV-10591
Description:
h52gif produced a segfault when a buffer overflow occurred because
the data size was corrupted and became very large. This commit added
a check on the data size against the buffer size to prevent the segfault.
It also added error reporting to h52gif to display an error message
instead of silently exiting when the failure occurred.
Platforms tested:
Linux/64 (jelly)
* Snapshot 1.8.22-snap9. Update version to 1.8.22-snap10.
* Merge pull request #2686 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit '800f93f7c994f88dfa716746153ded4b1e690e3a':
Remove path to szip header file from AM_CPPFLAGS when configure check of libsz fails. Fix for HDFFV-10830.
* Regenerate configure.
* Merge from 1.10-1.12-dev - LT parse needs update
* Incorporate pull request #2693 from develop for the fix to HDFFV-11080:
(1) Patch up the file pointer when reading attribute of variable length datatype
(2) Test to verify the fix when doing multiple threads
(3) Update MANIFEST
(4) Add new test to Cmake
* Switch bison and flex update of LT files from bin/genltanalyse to
bin/genparser, and from automatically updating the LT files whenever
reconfigure is run to running only on man<F12>ual command.
* Update hl/sr/H5LT files.
Add bin/genparser to MANIFEST; remove bin/genltanalyze.
* Fix to the merge of PR #2708 for HDFFV-11080 to the 1.8 branch.
Need to checkin test/Makefile.in for the new file added.
* Fix HDFFV-11120 and HDFFV-11121 (CVE-2018-13870 and CVE-2018-13869)
Description:
When a buffer overflow occurred because a name length was corrupted
and became very large, h5dump produced a segfault on one file and a
memcpy parameter overlap on another file. This commit added checks
that detect a read pass the end of the buffer to prevent these error
conditions.
Platforms tested:
Linux/64 (jelly)
* Fixed typo
* Check for header szlib.h only when libsz passes AC_CHECK_LIB, so that
H5_HAVE_SALIB_H is not defined when szip is not enabled, to prevent
compile failures for incompatible szlib.
* HDFFV-11127 - force RTLD_LOCAL in dlopen
* spelling
* Remove extra parens
* Remove unnecessary assignment freom configure.ac.
* Add hypen to subrelease regex
* Add special case when H5_VERS_SUBRELEASE is 0
* Revert H5_VERS_SUBRELEASE check
* The version string has a second use for packaging
* MinGW uses "MinGW Makefiles"
* Snapshot 1.8.22-snap10. Update version to 1.8.22-snap11.
* Merge clang-format changes from develop
* remove stray file
* Source formatted
* Add options to github actions.
* Add back file, remove py file
* HDFFV-11096 Correct h5dump usage text
* Update formating
* remove autogen for 1.8 branch
* Fix comment whitespace
* Change '==' to 'eq' in test script
* Merge from develop
github updates
bin scripts
parser updates
* Snapshot 1.8.22-snap11. Update version to 1.8.22-snap12.
* Merge from 1.10
Comments, whitespace
Simple init and if block brackets.
Minimal code changes limited to return value and spelling
* Update autotools files
* Update FD source
* More merges from 1.10 comments and inits
* Comment fixes
* Fix macro argument
* Remove autogen file and cache dir
* Revert autotools files to previous version
* Correct boolean value and missing define
* URL and options corrections
* revert autoconf files
* Fix compile issues with vfd drivers.
* Fix HDFS test
* Remove extra #endif
* Move init above execution
* Multiple changes to bring branch up-to-date (#87)
Correct TARGET variable and CMake config file location.
Add option to allow filter plugins to be built inline.
Update CMake tools macros.
* hdf5 1 8 release text (#113)
* Multiple changes to bring branch up-to-date
Correct TARGET variable and CMake config file location.
Add option to allow filter plugins to be built inline.
Update CMake tools macros.
* release text updates - mostly whitespace
* Fixed HDFFV-10480 and HDFFV-11159 (#145)
* Fixed HDFFV-10480 and HDFFV-11159
Description
Checked against buffer size to prevent segfault, in case of data corruption.
+ HDFFV-11159 CVE-2018-14033 Buffer over-read in H5O_layout_decode
+ HDFFV-10480 CVE-2018-11206 Buffer over-read in H5O_fill_new[/old]_decode and
A user's patch was applied to this previously, but it is redone
for a more correct fix, that is the check now accounted for the
previous advance of the buffer pointer.
Platforms tested:
Linux/64 (jelly)
* Fixed typo
* Update HDF5 1.8 copyright headers with updated copyright URL (#148)
* Update URL for COPYING file in copyright headers.
* Make fortran copyright headers uniformly spaced.
* Update url for Copyright file in c++/src/footer.html.
* OESS-98 Update plugin build option (#171)
* 1.8 has extra fortran CMake option (#176)
* 1.8 has extra fortran CMake option
* Update license URL
* OESS-98 fix tools test for plugins (#180)
* Hdf5 1 8 (#169)
* Fixed HDFFV-10480 and HDFFV-11159
Description
Checked against buffer size to prevent segfault, in case of data corruption.
+ HDFFV-11159 CVE-2018-14033 Buffer over-read in H5O_layout_decode
+ HDFFV-10480 CVE-2018-11206 Buffer over-read in H5O_fill_new[/old]_decode and
A user's patch was applied to this previously, but it is redone
for a more correct fix, that is the check now accounted for the
previous advance of the buffer pointer.
Platforms tested:
Linux/64 (jelly)
* Fixed typo
* Fixed HDFFV-11150
Description
Replaced an HDassert with a check for null pointer in H5O_dec_rc() to
catch null pointer in corrupted data situation.
Reversed the fix in svn-r24463 in which a check for null pointer prior
to calling H5O_dec_rc()
Platforms tested:
Linux/64 (jelly)
* HDF5 1 8 fix fortran build on macs (#186)
* Correct fortran and shared libs option
* Fix for no shared fortran build
* OESS-98 fix hdf5 link target (#191)
* Partial changes to RELEASE.txt for release. (#185)
* Partial changes to RELEASE.txt for release.
* Update supported and tested platforms.
* Update version to 1.8.22-12.
* close #195. (#196)
* Update HDF5PluginMacros.cmake
* Update HDF5PluginMacros.cmake
* Update directory for SZ filter in HDF5PluginMacros.cmake.
Updates for release:
Switch configure default to production mode.
Set HDF5_GENERATE_HEADERS to OFF.
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Restores maintainer mode in the autotools (#200) (#203)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
* Hdf5 1 8 22 (#212)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Brings ttsafe_attr_vlen.c changes from develop (#214)
Fixes exposed pthread problem on Windows.
* Update SO numbers for Hdf5 1 8 22 (#215)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Hdf5 1 8 22 (#224)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
* Update CMake/HDF5Examples version in bin/release
* Update CMake/HDF5Examples version number in bin/release (#225)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
* Fixed typo in an error message. (#228)
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* Bring 3 small changes from Hdf5 1.8 to 1.8.22 (#241)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* Stat st blocks fix 1822 (#251)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* Fixes Autotools detection of the st_blocks field in stat (#246)
* Fixes Autotools detection of the st_blocks field in stat
The Autotools and CMake will now both correctly determine if the
stat struct has the st_blocks field and set H5_HAVE_STAT_ST_BLOCKS
appropriately.
* Fixes a typo in configure.ac
* Restore lines in RELEASE.txt.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* Stat st blocks fix 1822 (#256)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* Fixes Autotools detection of the st_blocks field in stat (#246)
* Fixes Autotools detection of the st_blocks field in stat
The Autotools and CMake will now both correctly determine if the
stat struct has the st_blocks field and set H5_HAVE_STAT_ST_BLOCKS
appropriately.
* Fixes a typo in configure.ac
* Restore lines in RELEASE.txt.
* Updated configure with reconfigure.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* RELEASE.txt cleanup.
* Hdf5 1 8 22 (#261)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* RELEASE.txt cleanup.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.
* )Update version.
* Hdf5 1 8 22 (#266)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* RELEASE.txt cleanup.
* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.
* )Update version.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* Reverts lock/unlock callback signature to 1.8.21 version (#254)
* Reverts lock/unlock callback signature to 1.8.21 version
This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.
* Trivial whitespace fix
* Update version to 1.8.22-14.
* Hdf5 1 8 22 - Reverts lock/unlock callback signature to 1.8.21 version (#267)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* RELEASE.txt cleanup.
* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.
* )Update version.
* Reverts lock/unlock callback signature to 1.8.21 version (#254)
* Reverts lock/unlock callback signature to 1.8.21 version
This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.
* Trivial whitespace fix
* Update version to 1.8.22-14.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* Update version in H5public.h
* Hdf5 1 8 22 (#269)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* RELEASE.txt cleanup.
* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.
* )Update version.
* Reverts lock/unlock callback signature to 1.8.21 version (#254)
* Reverts lock/unlock callback signature to 1.8.21 version
This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.
* Trivial whitespace fix
* Update version to 1.8.22-14.
* Update version in H5public.h
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* Set version 1.8.22 for release.
* dd RELEASE.txt entry for HDFFV-10741.
* Hdf5 1 8 22 (#279)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* RELEASE.txt cleanup.
* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.
* )Update version.
* Reverts lock/unlock callback signature to 1.8.21 version (#254)
* Reverts lock/unlock callback signature to 1.8.21 version
This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.
* Trivial whitespace fix
* Update version to 1.8.22-14.
* Update version in H5public.h
* Set version 1.8.22 for release.
* dd RELEASE.txt entry for HDFFV-10741.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* Improve performance of multiple calls to H5Sget_select_elem_pointlist (#270) (#277)
* Cache the pointer to the next point to process after the last call to
H5S__get_select_elem_pointlist. This allows the normal process of
iterating over the points in batches to be much more efficient, as the
library does not need to traverse the entirety of the preceding points
every time the funciton is re-entered.
* Update RELEASE.txt for point selection iteration performance fix.
* Hdf5 1 8 22 (#281)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* RELEASE.txt cleanup.
* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.
* )Update version.
* Reverts lock/unlock callback signature to 1.8.21 version (#254)
* Reverts lock/unlock callback signature to 1.8.21 version
This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.
* Trivial whitespace fix
* Update version to 1.8.22-14.
* Update version in H5public.h
* Set version 1.8.22 for release.
* dd RELEASE.txt entry for HDFFV-10741.
* Improve performance of multiple calls to H5Sget_select_elem_pointlist (#270) (#277)
* Cache the pointer to the next point to process after the last call to
H5S__get_select_elem_pointlist. This allows the normal process of
iterating over the points in batches to be much more efficient, as the
library does not need to traverse the entirety of the preceding points
every time the funciton is re-entered.
* Update RELEASE.txt for point selection iteration performance fix.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
Co-authored-by: Neil Fortner <nfortne2@hdfgroup.org>
* Hdf5 1 8 22 (#284)
* Fixed typo in an error message.
* Updated for HDFFV-11150, HDFFV-10480, and HDFFV-11159
* Update "Support for New Platforms and Compilers" section in RELEASE.txt;
add check_version workaround for binary compatibility to "Known
Problems".
* Add SUSE Linux to tested platforms.
* Update numbers in config/lt_vers.am and run bin/reconfigure for so
numbers.
* Update version in 3 files missed by merge.
Co-authored-by: Allen Byrne <byrn@hdfgroup.org>
Co-authored-by: Vailin Choi <vchoi@hdfgroup.org>
Co-authored-by: vchoi <vchoi@jelly.ad.hdfgroup.org>
Co-authored-by: hdftest <hdftest@hdfgroup.org>
Co-authored-by: Jordan Henderson <jhenderson@hdfgroup.org>
Co-authored-by: Dana Robinson <derobins@hdfgroup.org>
Co-authored-by: Binh-Minh Ribler <bmribler@hdfgroup.org>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org>
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Neil Fortner <nfortne2@hdfgroup.org>
Diffstat (limited to 'hl/src')
-rw-r--r-- | hl/src/CMakeLists.txt | 80 | ||||
-rw-r--r-- | hl/src/COPYING | 2 | ||||
-rw-r--r-- | hl/src/H5DO.c | 116 | ||||
-rw-r--r-- | hl/src/H5DOpublic.h | 21 | ||||
-rw-r--r-- | hl/src/H5DS.c | 1819 | ||||
-rw-r--r-- | hl/src/H5DSprivate.h | 12 | ||||
-rw-r--r-- | hl/src/H5DSpublic.h | 50 | ||||
-rw-r--r-- | hl/src/H5HLprivate2.h | 3 | ||||
-rw-r--r-- | hl/src/H5IM.c | 1328 | ||||
-rw-r--r-- | hl/src/H5IMprivate.h | 12 | ||||
-rw-r--r-- | hl/src/H5IMpublic.h | 87 | ||||
-rw-r--r-- | hl/src/H5LT.c | 4722 | ||||
-rw-r--r-- | hl/src/H5LTanalyze.c | 214 | ||||
-rw-r--r-- | hl/src/H5LTanalyze.l | 28 | ||||
-rw-r--r-- | hl/src/H5LTparse.c | 2280 | ||||
-rw-r--r-- | hl/src/H5LTparse.h | 182 | ||||
-rw-r--r-- | hl/src/H5LTparse.y | 21 | ||||
-rw-r--r-- | hl/src/H5LTprivate.h | 25 | ||||
-rw-r--r-- | hl/src/H5LTpublic.h | 353 | ||||
-rw-r--r-- | hl/src/H5PT.c | 887 | ||||
-rw-r--r-- | hl/src/H5PTprivate.h | 3 | ||||
-rw-r--r-- | hl/src/H5PTpublic.h | 30 | ||||
-rw-r--r-- | hl/src/H5TB.c | 3307 | ||||
-rw-r--r-- | hl/src/H5TBprivate.h | 29 | ||||
-rw-r--r-- | hl/src/H5TBpublic.h | 197 | ||||
-rw-r--r-- | hl/src/Makefile.am | 2 | ||||
-rw-r--r-- | hl/src/Makefile.in | 46 | ||||
-rw-r--r-- | hl/src/hdf5_hl.h | 3 |
28 files changed, 7474 insertions, 8385 deletions
diff --git a/hl/src/CMakeLists.txt b/hl/src/CMakeLists.txt index d570265..bb10088 100644 --- a/hl/src/CMakeLists.txt +++ b/hl/src/CMakeLists.txt @@ -1,10 +1,10 @@ -cmake_minimum_required (VERSION 3.10) -PROJECT (HDF5_HL_SRC) +cmake_minimum_required (VERSION 3.12) +project (HDF5_HL_SRC C) #----------------------------------------------------------------------------- # List Source files #----------------------------------------------------------------------------- -set (HL_SRCS +set (HL_SOURCES ${HDF5_HL_SRC_SOURCE_DIR}/H5DO.c ${HDF5_HL_SRC_SOURCE_DIR}/H5DS.c ${HDF5_HL_SRC_SOURCE_DIR}/H5IM.c @@ -26,33 +26,59 @@ set (HL_HEADERS ${HDF5_HL_SRC_SOURCE_DIR}/hdf5_hl.h ) -add_library (${HDF5_HL_LIB_TARGET} STATIC ${HL_SRCS} ${HL_HEADERS}) -TARGET_C_PROPERTIES (${HDF5_HL_LIB_TARGET} STATIC " " " ") -target_link_libraries (${HDF5_HL_LIB_TARGET} PUBLIC ${HDF5_LIB_TARGET}) -H5_SET_LIB_OPTIONS (${HDF5_HL_LIB_TARGET} ${HDF5_HL_LIB_NAME} STATIC 0) -set_target_properties (${HDF5_HL_LIB_TARGET} PROPERTIES - FOLDER libraries/hl - INTERFACE_INCLUDE_DIRECTORIES "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>" +set (HL_PRIVATE_HEADERS + ${HDF5_HL_SRC_SOURCE_DIR}/H5LTparse.h + ${HDF5_HL_SRC_SOURCE_DIR}/H5DSprivate.h + ${HDF5_HL_SRC_SOURCE_DIR}/H5IMprivate.h + ${HDF5_HL_SRC_SOURCE_DIR}/H5PTprivate.h + ${HDF5_HL_SRC_SOURCE_DIR}/H5HLprivate2.h + ${HDF5_HL_SRC_SOURCE_DIR}/H5LTprivate.h + ${HDF5_HL_SRC_SOURCE_DIR}/H5TBprivate.h ) -set_global_variable (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_HL_LIB_TARGET}") -set (install_targets ${HDF5_HL_LIB_TARGET}) + +if (NOT ONLY_SHARED_LIBS) + add_library (${HDF5_HL_LIB_TARGET} STATIC ${HL_SOURCES} ${HL_HEADERS} ${HL_PRIVATE_HEADERS}) + target_include_directories (${HDF5_HL_LIB_TARGET} + PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>" + INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>" + ) + target_compile_options(${HDF5_HL_LIB_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}") + TARGET_C_PROPERTIES (${HDF5_HL_LIB_TARGET} STATIC) + target_link_libraries (${HDF5_HL_LIB_TARGET} PUBLIC ${HDF5_LIB_TARGET}) + H5_SET_LIB_OPTIONS (${HDF5_HL_LIB_TARGET} ${HDF5_HL_LIB_NAME} STATIC 0) + set_target_properties (${HDF5_HL_LIB_TARGET} PROPERTIES FOLDER libraries/hl) + set_global_variable (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_HL_LIB_TARGET}") + set (install_targets ${HDF5_HL_LIB_TARGET}) +endif () if (BUILD_SHARED_LIBS) - add_library (${HDF5_HL_LIBSH_TARGET} SHARED ${HL_SRCS} ${HL_HEADERS}) - TARGET_C_PROPERTIES (${HDF5_HL_LIBSH_TARGET} SHARED " " " ") + add_library (${HDF5_HL_LIBSH_TARGET} SHARED ${HL_SOURCES} ${HL_HEADERS} ${HL_PRIVATE_HEADERS}) + target_include_directories (${HDF5_HL_LIBSH_TARGET} + PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>" + INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>" + ) + target_compile_options(${HDF5_HL_LIBSH_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}") + target_compile_definitions(${HDF5_HL_LIBSH_TARGET} PUBLIC "H5_BUILT_AS_DYNAMIC_LIB") + TARGET_C_PROPERTIES (${HDF5_HL_LIBSH_TARGET} SHARED) target_link_libraries (${HDF5_HL_LIBSH_TARGET} PUBLIC ${HDF5_LIBSH_TARGET}) H5_SET_LIB_OPTIONS (${HDF5_HL_LIBSH_TARGET} ${HDF5_HL_LIB_NAME} SHARED "HL") - set_target_properties (${HDF5_HL_LIBSH_TARGET} PROPERTIES - FOLDER libraries/hl - COMPILE_DEFINITIONS "H5_BUILT_AS_DYNAMIC_LIB" - INTERFACE_INCLUDE_DIRECTORIES "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>" - INTERFACE_COMPILE_DEFINITIONS H5_BUILT_AS_DYNAMIC_LIB=1 - ) + set_target_properties (${HDF5_HL_LIBSH_TARGET} PROPERTIES FOLDER libraries/hl) set_global_variable (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_HL_LIBSH_TARGET}") set (install_targets ${install_targets} ${HDF5_HL_LIBSH_TARGET}) endif () #----------------------------------------------------------------------------- +# Add Target to clang-format +#----------------------------------------------------------------------------- +if (HDF5_ENABLE_FORMATTERS) + if (NOT ONLY_SHARED_LIBS) + clang_format (HDF5_HL_SRC_FORMAT ${HDF5_HL_LIB_TARGET}) + else () + clang_format (HDF5_HL_SRC_FORMAT ${HDF5_HL_LIBSH_TARGET}) + endif () +endif () + +#----------------------------------------------------------------------------- # Add file(s) to CMake Install #----------------------------------------------------------------------------- install ( @@ -71,7 +97,9 @@ if (HDF5_EXPORTED_TARGETS) if (BUILD_SHARED_LIBS) INSTALL_TARGET_PDB (${HDF5_HL_LIBSH_TARGET} ${HDF5_INSTALL_BIN_DIR} hllibraries) endif () - INSTALL_TARGET_PDB (${HDF5_HL_LIB_TARGET} ${HDF5_INSTALL_BIN_DIR} hllibraries) + if (NOT ONLY_SHARED_LIBS) + INSTALL_TARGET_PDB (${HDF5_HL_LIB_TARGET} ${HDF5_INSTALL_LIB_DIR} hllibraries) + endif () install ( TARGETS @@ -98,13 +126,15 @@ set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}") set (_PKG_CONFIG_LIBS_PRIVATE) -set (_PKG_CONFIG_LIBS "${_PKG_CONFIG_LIBS} -l${HDF5_HL_LIB_CORENAME}") +if (NOT ONLY_SHARED_LIBS) + set (_PKG_CONFIG_LIBS "${_PKG_CONFIG_LIBS} -l${HDF5_HL_LIB_CORENAME}") +endif () if (BUILD_SHARED_LIBS) set (_PKG_CONFIG_SH_LIBS "${_PKG_CONFIG_SH_LIBS} -l${HDF5_HL_LIB_CORENAME}") endif () -set (_PKG_CONFIG_REQUIRES "${HDF5_LIB_CORENAME}") -set (_PKG_CONFIG_REQUIRES_PRIVATE "${HDF5_LIB_CORENAME}") +set (_PKG_CONFIG_REQUIRES "${HDF5_LIB_CORENAME}-${HDF5_PACKAGE_VERSION}") +set (_PKG_CONFIG_REQUIRES_PRIVATE "${HDF5_LIB_CORENAME}-${HDF5_PACKAGE_VERSION}") configure_file ( ${HDF_RESOURCES_DIR}/libhdf5.pc.in @@ -117,7 +147,7 @@ install ( COMPONENT hllibraries ) -if (NOT WIN32) +if (NOT WIN32 AND NOT MINGW) set (_PKG_CONFIG_COMPILER ${CMAKE_C_COMPILER}) configure_file ( ${HDF_RESOURCES_DIR}/libh5cc.in diff --git a/hl/src/COPYING b/hl/src/COPYING index 6497ace..97969da 100644 --- a/hl/src/COPYING +++ b/hl/src/COPYING @@ -7,7 +7,7 @@ The full HDF5 copyright notice, including terms governing use, modification, and redistribution, is contained in the COPYING file which can be found at the root of the source code distribution tree - or in https://support.hdfgroup.org/ftp/HDF5/releases. If you do + or in https://www.hdfgroup.org/licenses. If you do not have access to either file, you may request a copy from help@hdfgroup.org. diff --git a/hl/src/H5DO.c b/hl/src/H5DO.c index f17e5d5..75c2f77 100644 --- a/hl/src/H5DO.c +++ b/hl/src/H5DO.c @@ -1,20 +1,15 @@ /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * -* Copyright by The HDF Group. * -* Copyright by the Board of Trustees of the University of Illinois. * -* All rights reserved. * -* * -* This file is part of HDF5. The full HDF5 copyright notice, including * -* terms governing use, modification, and redistribution, is contained in * + * Copyright by The HDF Group. * + * Copyright by the Board of Trustees of the University of Illinois. * + * All rights reserved. * + * * + * This file is part of HDF5. The full HDF5 copyright notice, including * + * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * -* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ - -#include <string.h> -#include <stdlib.h> -#include <assert.h> -#include <stdio.h> + * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* High-level library internal header file */ #include "H5HLprivate2.h" @@ -22,79 +17,74 @@ /* public LT prototypes */ #include "H5DOpublic.h" - - /*------------------------------------------------------------------------- - * Function: H5DOwrite_chunk + * Function: H5DOwrite_chunk * * Purpose: Writes an entire chunk to the file directly. * - * Return: Non-negative on success/Negative on failure - * - * Programmer: Raymond Lu - * 30 July 2012 + * Return: Non-negative on success/Negative on failure * *------------------------------------------------------------------------- */ herr_t -H5DOwrite_chunk(hid_t dset_id, hid_t dxpl_id, uint32_t filters, const hsize_t *offset, - size_t data_size, const void *buf) +H5DOwrite_chunk(hid_t dset_id, hid_t dxpl_id, uint32_t filters, const hsize_t *offset, size_t data_size, + const void *buf) { - hbool_t created_dxpl = FALSE; /* Whether we created a DXPL */ - hbool_t do_direct_write = TRUE; /* Flag for direct writes */ - uint32_t data_size_32; /* Chunk data size (limited to 32-bits currently) */ - herr_t ret_value = FAIL; /* Return value */ + hbool_t created_dxpl = FALSE; /* Whether we created a DXPL */ + hbool_t do_direct_write = TRUE; /* Flag for direct writes */ + uint32_t data_size_32; /* Chunk data size (limited to 32-bits currently) */ + herr_t ret_value = FAIL; /* Return value */ /* Check arguments */ - if(dset_id < 0) + if (dset_id < 0) goto done; - if(!buf) + if (!buf) goto done; - if(!offset) + if (!offset) goto done; - if(!data_size) + if (!data_size) goto done; data_size_32 = (uint32_t)data_size; - if(data_size != (size_t)data_size_32) + if (data_size != (size_t)data_size_32) goto done; /* If the user passed in a default DXPL, create one to pass to H5Dwrite() */ - if(H5P_DEFAULT == dxpl_id) { - if((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) + if (H5P_DEFAULT == dxpl_id) { + if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) goto done; created_dxpl = TRUE; } /* end if */ /* Set direct write parameters */ - if(H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_WRITE_FLAG_NAME, &do_direct_write) < 0) + if (H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_WRITE_FLAG_NAME, &do_direct_write) < 0) goto done; - if(H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_WRITE_FILTERS_NAME, &filters) < 0) + if (H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_WRITE_FILTERS_NAME, &filters) < 0) goto done; - if(H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_WRITE_OFFSET_NAME, &offset) < 0) + if (H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_WRITE_OFFSET_NAME, &offset) < 0) goto done; - if(H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_WRITE_DATASIZE_NAME, &data_size_32) < 0) + if (H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_WRITE_DATASIZE_NAME, &data_size_32) < 0) goto done; /* Write chunk */ - if(H5Dwrite(dset_id, 0, H5S_ALL, H5S_ALL, dxpl_id, buf) < 0) + if (H5Dwrite(dset_id, 0, H5S_ALL, H5S_ALL, dxpl_id, buf) < 0) goto done; /* Indicate success */ ret_value = SUCCEED; done: - if(created_dxpl) { - if(H5Pclose(dxpl_id) < 0) + if (created_dxpl) { + if (H5Pclose(dxpl_id) < 0) ret_value = FAIL; } /* end if */ else { /* Reset the direct write flag on user DXPL */ do_direct_write = FALSE; - if(H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_WRITE_FLAG_NAME, &do_direct_write) < 0) + if (H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_WRITE_FLAG_NAME, &do_direct_write) < 0) ret_value = FAIL; } - return(ret_value); + return (ret_value); } /* end H5DOwrite_chunk() */ /*------------------------------------------------------------------------- @@ -104,63 +94,59 @@ done: * * Return: Non-negative on success/Negative on failure * - * Programmer: Matthew Strong (GE Healthcare) - * 14 February 2016 - * - *------------ ------------------------------------------------------------- + *--------------------------------------------------------------------------- */ herr_t -H5DOread_chunk(hid_t dset_id, hid_t dxpl_id, const hsize_t *offset, uint32_t *filters, - void *buf) +H5DOread_chunk(hid_t dset_id, hid_t dxpl_id, const hsize_t *offset, uint32_t *filters, void *buf) { - hbool_t created_dxpl = FALSE; /* Whether we created a DXPL */ - hbool_t do_direct_read = TRUE; /* Flag for direct writes */ - herr_t ret_value = FAIL; /* Return value */ + hbool_t created_dxpl = FALSE; /* Whether we created a DXPL */ + hbool_t do_direct_read = TRUE; /* Flag for direct writes */ + herr_t ret_value = FAIL; /* Return value */ /* Check arguments */ - if(dset_id < 0) + if (dset_id < 0) goto done; - if(!buf) + if (!buf) goto done; - if(!offset) + if (!offset) goto done; - if(!filters) + if (!filters) goto done; /* If the user passed in a default DXPL, create one to pass to H5Dwrite() */ - if(H5P_DEFAULT == dxpl_id) { - if((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) + if (H5P_DEFAULT == dxpl_id) { + if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) goto done; created_dxpl = TRUE; } /* end if */ /* Set direct write parameters */ - if(H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_READ_FLAG_NAME, &do_direct_read) < 0) + if (H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_READ_FLAG_NAME, &do_direct_read) < 0) goto done; - if(H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_READ_OFFSET_NAME, &offset) < 0) + if (H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_READ_OFFSET_NAME, &offset) < 0) goto done; /* Read chunk */ - if(H5Dread(dset_id, 0, H5S_ALL, H5S_ALL, dxpl_id, buf) < 0) + if (H5Dread(dset_id, 0, H5S_ALL, H5S_ALL, dxpl_id, buf) < 0) goto done; /* Get the filter mask */ - if(H5Pget(dxpl_id, H5D_XFER_DIRECT_CHUNK_READ_FILTERS_NAME, filters) < 0) + if (H5Pget(dxpl_id, H5D_XFER_DIRECT_CHUNK_READ_FILTERS_NAME, filters) < 0) goto done; /* Indicate success */ ret_value = SUCCEED; done: - if(created_dxpl) { - if(H5Pclose(dxpl_id) < 0) + if (created_dxpl) { + if (H5Pclose(dxpl_id) < 0) ret_value = FAIL; } /* end if */ else { /* Reset the direct read flag on user DXPL */ do_direct_read = FALSE; - if(H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_READ_FLAG_NAME, &do_direct_read) < 0) + if (H5Pset(dxpl_id, H5D_XFER_DIRECT_CHUNK_READ_FLAG_NAME, &do_direct_read) < 0) ret_value = FAIL; } - return(ret_value); + return (ret_value); } /* end H5DOread_chunk() */ diff --git a/hl/src/H5DOpublic.h b/hl/src/H5DOpublic.h index 413bc0c..8bb4547 100644 --- a/hl/src/H5DOpublic.h +++ b/hl/src/H5DOpublic.h @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -25,12 +25,8 @@ extern "C" { *------------------------------------------------------------------------- */ -H5_HLDLL herr_t H5DOwrite_chunk(hid_t dset_id, - hid_t dxpl_id, - uint32_t filters, - const hsize_t *offset, - size_t data_size, - const void *buf); +H5_HLDLL herr_t H5DOwrite_chunk(hid_t dset_id, hid_t dxpl_id, uint32_t filters, const hsize_t *offset, + size_t data_size, const void *buf); /*------------------------------------------------------------------------- * @@ -39,15 +35,14 @@ H5_HLDLL herr_t H5DOwrite_chunk(hid_t dset_id, *------------------------------------------------------------------------- */ -H5_HLDLL herr_t H5DOread_chunk(hid_t dset_id, /*in*/ - hid_t dxpl_id, /*in*/ - const hsize_t *offset, /*in*/ - uint32_t *filters, /*out*/ - void *buf); /*out*/ +H5_HLDLL herr_t H5DOread_chunk(hid_t dset_id, /*in*/ + hid_t dxpl_id, /*in*/ + const hsize_t *offset, /*in*/ + uint32_t * filters, /*out*/ + void * buf); /*out*/ #ifdef __cplusplus } #endif #endif - diff --git a/hl/src/H5DS.c b/hl/src/H5DS.c index 0778d3d..7ade5d9 100644 --- a/hl/src/H5DS.c +++ b/hl/src/H5DS.c @@ -1,15 +1,15 @@ /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * -* Copyright by The HDF Group. * -* Copyright by the Board of Trustees of the University of Illinois. * -* All rights reserved. * -* * -* This file is part of HDF5. The full HDF5 copyright notice, including * -* terms governing use, modification, and redistribution, is contained in * + * Copyright by The HDF Group. * + * Copyright by the Board of Trustees of the University of Illinois. * + * All rights reserved. * + * * + * This file is part of HDF5. The full HDF5 copyright notice, including * + * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * -* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ + * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ #include <assert.h> #include <stdlib.h> @@ -19,156 +19,151 @@ #include "H5IMprivate.h" #include "H5TBprivate.h" - /* Local routines */ static herr_t H5DS_is_reserved(hid_t did); -static hid_t H5DS_get_REFLIST_type(void); +static hid_t H5DS_get_REFLIST_type(void); /*------------------------------------------------------------------------- -* Function: H5DSset_scale -* -* Purpose: The dataset DSID is converted to a Dimension Scale dataset. -* Creates the CLASS attribute, set to the value "DIMENSION_SCALE" -* and an empty REFERENCE_LIST attribute. -* If DIMNAME is specified, then an attribute called NAME is created, -* with the value DIMNAME. -* -* Return: Success: SUCCEED, Failure: FAIL -* -* Programmer: pvn@ncsa.uiuc.edu -* -* Date: January 04, 2005 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5DSset_scale(hid_t dsid, - const char *dimname) + * Function: H5DSset_scale + * + * Purpose: The dataset DSID is converted to a Dimension Scale dataset. + * Creates the CLASS attribute, set to the value "DIMENSION_SCALE" + * and an empty REFERENCE_LIST attribute. + * If DIMNAME is specified, then an attribute called NAME is created, + * with the value DIMNAME. + * + * Return: Success: SUCCEED, Failure: FAIL + * + * Programmer: pvn@ncsa.uiuc.edu + * + * Date: January 04, 2005 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5DSset_scale(hid_t dsid, const char *dimname) { - int has_dimlist; + int has_dimlist; H5I_type_t it; /*------------------------------------------------------------------------- - * parameter checking - *------------------------------------------------------------------------- - */ + * parameter checking + *------------------------------------------------------------------------- + */ /* get ID type */ if ((it = H5Iget_type(dsid)) < 0) return FAIL; - if (H5I_DATASET!=it) + if (H5I_DATASET != it) return FAIL; /*------------------------------------------------------------------------- - * check if the dataset is a dataset wich has references to dimension scales - *------------------------------------------------------------------------- - */ + * check if the dataset is a dataset wich has references to dimension scales + *------------------------------------------------------------------------- + */ /* try to find the attribute "DIMENSION_LIST" */ - if ((has_dimlist = H5LT_find_attribute(dsid,DIMENSION_LIST)) < 0) + if ((has_dimlist = H5LT_find_attribute(dsid, DIMENSION_LIST)) < 0) return FAIL; if (has_dimlist == 1) return FAIL; /*------------------------------------------------------------------------- - * write the standard attributes for a Dimension Scale dataset - *------------------------------------------------------------------------- - */ + * write the standard attributes for a Dimension Scale dataset + *------------------------------------------------------------------------- + */ - if (H5LT_set_attribute_string(dsid,"CLASS",DIMENSION_SCALE_CLASS) < 0) + if (H5LT_set_attribute_string(dsid, "CLASS", DIMENSION_SCALE_CLASS) < 0) return FAIL; - if (dimname!=NULL) - { - if (H5LT_set_attribute_string(dsid,"NAME",dimname) < 0) + if (dimname != NULL) { + if (H5LT_set_attribute_string(dsid, "NAME", dimname) < 0) return FAIL; } return SUCCEED; } - - /*------------------------------------------------------------------------- -* Function: H5DSattach_scale -* -* Purpose: Define Dimension Scale DSID to be associated with dimension IDX -* of Dataset DID. Entries are created in the DIMENSION_LIST and -* REFERENCE_LIST attributes. -* -* Return: -* Success: SUCCEED -* Failure: FAIL -* -* Fails if: Bad arguments -* If DSID is not a Dimension Scale -* If DID is a Dimension Scale (A Dimension Scale cannot have scales) -* -* Programmer: pvn@ncsa.uiuc.edu -* -* Date: December 20, 2004 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5DSattach_scale(hid_t did, - hid_t dsid, - unsigned int idx) + * Function: H5DSattach_scale + * + * Purpose: Define Dimension Scale DSID to be associated with dimension IDX + * of Dataset DID. Entries are created in the DIMENSION_LIST and + * REFERENCE_LIST attributes. + * + * Return: + * Success: SUCCEED + * Failure: FAIL + * + * Fails if: Bad arguments + * If DSID is not a Dimension Scale + * If DID is a Dimension Scale (A Dimension Scale cannot have scales) + * + * Programmer: pvn@ncsa.uiuc.edu + * + * Date: December 20, 2004 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx) { int has_dimlist; int has_reflist; int is_ds; hssize_t nelmts; hid_t sid; /* space ID */ - hid_t tid = -1; /* attribute type ID */ + hid_t tid = -1; /* attribute type ID */ hid_t ntid = -1; /* attribute native type ID */ - hid_t aid = -1; /* attribute ID */ + hid_t aid = -1; /* attribute ID */ int rank; /* rank of dataset */ hsize_t dims[1]; /* dimension of the "REFERENCE_LIST" array */ ds_list_t dsl; /* attribute data in the DS pointing to the dataset */ - ds_list_t *dsbuf = NULL; /* array of attribute data in the DS pointing to the dataset */ + ds_list_t *dsbuf = NULL; /* array of attribute data in the DS pointing to the dataset */ hobj_ref_t ref_to_ds; /* reference to the DS */ hobj_ref_t ref_j; /* iterator reference */ - hvl_t *buf = NULL; /* VL buffer to store in the attribute */ + hvl_t * buf = NULL; /* VL buffer to store in the attribute */ hid_t dsid_j; /* DS dataset ID in DIMENSION_LIST */ H5O_info_t oi1, oi2; H5I_type_t it1, it2; int i; - size_t len; - int found_ds=0; + size_t len; + int found_ds = 0; htri_t is_scale; /*------------------------------------------------------------------------- - * parameter checking - *------------------------------------------------------------------------- - */ + * parameter checking + *------------------------------------------------------------------------- + */ if ((is_scale = H5DSis_scale(did)) < 0) return FAIL; /* the dataset cannot be a DS dataset */ - if ( is_scale == 1) + if (is_scale == 1) return FAIL; /* get info for the dataset in the parameter list */ - if(H5Oget_info(did, &oi1) < 0) + if (H5Oget_info(did, &oi1) < 0) return FAIL; /* get info for the scale in the parameter list */ - if(H5Oget_info(dsid, &oi2) < 0) + if (H5Oget_info(dsid, &oi2) < 0) return FAIL; /* same object, not valid */ - if(oi1.fileno == oi2.fileno && oi1.addr == oi2.addr) + if (oi1.fileno == oi2.fileno && oi1.addr == oi2.addr) return FAIL; /* get ID type */ @@ -177,51 +172,50 @@ herr_t H5DSattach_scale(hid_t did, if ((it2 = H5Iget_type(dsid)) < 0) return FAIL; - if (H5I_DATASET!=it1 || H5I_DATASET!=it2) + if (H5I_DATASET != it1 || H5I_DATASET != it2) return FAIL; /* the DS dataset cannot have dimension scales */ - if (H5LT_find_attribute(dsid,DIMENSION_LIST)==1) + if (H5LT_find_attribute(dsid, DIMENSION_LIST) == 1) return FAIL; /* check if the dataset is a "reserved" dataset (image, table) */ - if (H5DS_is_reserved(did)==1) + if (H5DS_is_reserved(did) == 1) return FAIL; - /*------------------------------------------------------------------------- - * The dataset may or may not have the associated DS attribute - * First we try to open to see if it is already there; if not, it is created. - * If it exists, the array of references is extended to hold the reference - * to the new DS - *------------------------------------------------------------------------- - */ + * The dataset may or may not have the associated DS attribute + * First we try to open to see if it is already there; if not, it is created. + * If it exists, the array of references is extended to hold the reference + * to the new DS + *------------------------------------------------------------------------- + */ /* get dataset space */ if ((sid = H5Dget_space(did)) < 0) return FAIL; /* get rank */ - if ((rank=H5Sget_simple_extent_ndims(sid)) < 0) + if ((rank = H5Sget_simple_extent_ndims(sid)) < 0) goto out; /* scalar rank */ - if (rank==0) - rank=1; + if (rank == 0) + rank = 1; /* close dataset space */ if (H5Sclose(sid) < 0) return FAIL; /* parameter range checking */ - if (idx>(unsigned)rank-1) + if (idx > (unsigned)rank - 1) return FAIL; /*------------------------------------------------------------------------- - * two references are created: one to the DS, saved in "DIMENSION_LIST" - * and one to the dataset, saved in "REFERENCE_LIST" - *------------------------------------------------------------------------- - */ + * two references are created: one to the DS, saved in "DIMENSION_LIST" + * and one to the dataset, saved in "REFERENCE_LIST" + *------------------------------------------------------------------------- + */ /* create a reference for the >>DS<< dataset */ if (H5Rcreate(&ref_to_ds, dsid, ".", H5R_OBJECT, (hid_t)-1) < 0) return FAIL; @@ -231,57 +225,56 @@ herr_t H5DSattach_scale(hid_t did, return FAIL; /* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ - if ((has_dimlist = H5LT_find_attribute(did,DIMENSION_LIST)) < 0) + if ((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0) return FAIL; /*------------------------------------------------------------------------- - * it does not exist. we create the attribute and its reference data - *------------------------------------------------------------------------- - */ - if (has_dimlist == 0) - { + * it does not exist. we create the attribute and its reference data + *------------------------------------------------------------------------- + */ + if (has_dimlist == 0) { - dims[0] = (hsize_t)rank; + dims[0] = (hsize_t)rank; /* space for the attribute */ - if((sid = H5Screate_simple(1, dims, NULL)) < 0) + if ((sid = H5Screate_simple(1, dims, NULL)) < 0) return FAIL; /* create the type for the attribute "DIMENSION_LIST" */ - if((tid = H5Tvlen_create(H5T_STD_REF_OBJ)) < 0) + if ((tid = H5Tvlen_create(H5T_STD_REF_OBJ)) < 0) goto out; /* create the attribute */ - if((aid = H5Acreate2(did, DIMENSION_LIST, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((aid = H5Acreate2(did, DIMENSION_LIST, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; /* allocate and initialize the VL */ buf = (hvl_t *)HDmalloc((size_t)rank * sizeof(hvl_t)); - if(buf == NULL) + if (buf == NULL) goto out; - for(i = 0; i < rank; i++) { + for (i = 0; i < rank; i++) { buf[i].len = 0; - buf[i].p = NULL; + buf[i].p = NULL; } /* store the REF information in the index of the dataset that has the DS */ - buf[idx].len = 1; - buf[idx].p = HDmalloc( 1 * sizeof(hobj_ref_t)); + buf[idx].len = 1; + buf[idx].p = HDmalloc(1 * sizeof(hobj_ref_t)); ((hobj_ref_t *)buf[idx].p)[0] = ref_to_ds; /* write the attribute with the reference */ - if(H5Awrite(aid, tid, buf) < 0) + if (H5Awrite(aid, tid, buf) < 0) goto out; /* close */ - if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) + if (H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) goto out; - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; - if(H5Tclose(tid) < 0) + if (H5Tclose(tid) < 0) goto out; - if(H5Aclose(aid) < 0) + if (H5Aclose(aid) < 0) goto out; HDfree(buf); @@ -289,212 +282,211 @@ herr_t H5DSattach_scale(hid_t did, } /*------------------------------------------------------------------------- - * the attribute already exists, open it, extend the buffer, - * and insert the new reference - *------------------------------------------------------------------------- - */ - else if(has_dimlist == 1) - { - if((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0) + * the attribute already exists, open it, extend the buffer, + * and insert the new reference + *------------------------------------------------------------------------- + */ + else if (has_dimlist == 1) { + if ((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0) goto out; - if((tid = H5Aget_type(aid)) < 0) + if ((tid = H5Aget_type(aid)) < 0) goto out; - if((sid = H5Aget_space(aid)) < 0) + if ((sid = H5Aget_space(aid)) < 0) goto out; /* allocate and initialize the VL */ buf = (hvl_t *)HDmalloc((size_t)rank * sizeof(hvl_t)); - if(buf == NULL) + if (buf == NULL) goto out; /* read */ - if(H5Aread(aid, tid, buf) < 0) + if (H5Aread(aid, tid, buf) < 0) goto out; /* check to avoid inserting duplicates. it is not FAIL, just do nothing */ /* iterate all the REFs in this dimension IDX */ - for(i = 0; i < (int)buf[idx].len; i++) { + for (i = 0; i < (int)buf[idx].len; i++) { /* get the reference */ ref_j = ((hobj_ref_t *)buf[idx].p)[i]; /* get the scale id for this REF */ - if((dsid_j = H5Rdereference(did,H5R_OBJECT,&ref_j)) < 0) + if ((dsid_j = H5Rdereference(did, H5R_OBJECT, &ref_j)) < 0) goto out; /* get info for DS in the parameter list */ - if(H5Oget_info(dsid, &oi1) < 0) + if (H5Oget_info(dsid, &oi1) < 0) goto out; /* get info for this DS */ - if(H5Oget_info(dsid_j, &oi2) < 0) + if (H5Oget_info(dsid_j, &oi2) < 0) goto out; /* same object, so this DS scale is already in this DIM IDX */ - if(oi1.fileno == oi2.fileno && oi1.addr == oi2.addr) + if (oi1.fileno == oi2.fileno && oi1.addr == oi2.addr) found_ds = 1; /* close the dereferenced dataset */ - if(H5Dclose(dsid_j) < 0) + if (H5Dclose(dsid_j) < 0) goto out; } /* end for */ - if(found_ds == 0) { + if (found_ds == 0) { /* we are adding one more DS to this dimension */ - if(buf[idx].len > 0) { + if (buf[idx].len > 0) { buf[idx].len++; - len = buf[idx].len; - buf[idx].p = HDrealloc(buf[idx].p, len * sizeof(hobj_ref_t)); + len = buf[idx].len; + buf[idx].p = HDrealloc(buf[idx].p, len * sizeof(hobj_ref_t)); ((hobj_ref_t *)buf[idx].p)[len - 1] = ref_to_ds; } /* end if */ else { /* store the REF information in the index of the dataset that has the DS */ - buf[idx].len = 1; - buf[idx].p = HDmalloc(sizeof(hobj_ref_t)); + buf[idx].len = 1; + buf[idx].p = HDmalloc(sizeof(hobj_ref_t)); ((hobj_ref_t *)buf[idx].p)[0] = ref_to_ds; } /* end else */ - } /* end if */ + } /* end if */ /* write the attribute with the new references */ - if(H5Awrite(aid, tid, buf) < 0) + if (H5Awrite(aid, tid, buf) < 0) goto out; /* close */ - if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) + if (H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) goto out; - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; - if(H5Tclose(tid) < 0) + if (H5Tclose(tid) < 0) goto out; - if(H5Aclose(aid) < 0) + if (H5Aclose(aid) < 0) goto out; HDfree(buf); buf = NULL; } /* has_dimlist */ /*------------------------------------------------------------------------- - * save DS info on the >>DS<< dataset - *------------------------------------------------------------------------- - */ + * save DS info on the >>DS<< dataset + *------------------------------------------------------------------------- + */ /* try to find the attribute "REFERENCE_LIST" on the >>DS<< dataset */ - if((has_reflist = H5LT_find_attribute(dsid, REFERENCE_LIST)) < 0) + if ((has_reflist = H5LT_find_attribute(dsid, REFERENCE_LIST)) < 0) goto out; /*------------------------------------------------------------------------- - * it does not exist. we create the attribute and its reference data - *------------------------------------------------------------------------- - */ - if(has_reflist == 0) { + * it does not exist. we create the attribute and its reference data + *------------------------------------------------------------------------- + */ + if (has_reflist == 0) { dims[0] = 1; /* space for the attribute */ - if((sid = H5Screate_simple(1,dims,NULL)) < 0) + if ((sid = H5Screate_simple(1, dims, NULL)) < 0) goto out; /* create the compound datatype for the attribute "REFERENCE_LIST" */ - if((tid = H5Tcreate(H5T_COMPOUND, sizeof(ds_list_t))) < 0) + if ((tid = H5Tcreate(H5T_COMPOUND, sizeof(ds_list_t))) < 0) goto out; /* insert reference field */ - if(H5Tinsert(tid, "dataset", HOFFSET(ds_list_t,ref), H5T_STD_REF_OBJ) < 0) + if (H5Tinsert(tid, "dataset", HOFFSET(ds_list_t, ref), H5T_STD_REF_OBJ) < 0) goto out; /* insert dimension idx of the dataset field */ - if(H5Tinsert(tid, "dimension", HOFFSET(ds_list_t, dim_idx), H5T_NATIVE_INT) < 0) + if (H5Tinsert(tid, "dimension", HOFFSET(ds_list_t, dim_idx), H5T_NATIVE_INT) < 0) goto out; /* create the attribute */ - if((aid = H5Acreate2(dsid, REFERENCE_LIST, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((aid = H5Acreate2(dsid, REFERENCE_LIST, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; /* store the IDX information */ dsl.dim_idx = idx; /* write the attribute with the reference */ - if(H5Awrite(aid, tid, &dsl) < 0) + if (H5Awrite(aid, tid, &dsl) < 0) goto out; /* close */ - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; - if(H5Tclose(tid) < 0) + if (H5Tclose(tid) < 0) goto out; - if(H5Aclose(aid) < 0) + if (H5Aclose(aid) < 0) goto out; } /* end if */ /*------------------------------------------------------------------------- - * the "REFERENCE_LIST" array already exists, open it and extend it - *------------------------------------------------------------------------- - */ - else if(has_reflist == 1) { - if((aid = H5Aopen(dsid, REFERENCE_LIST, H5P_DEFAULT)) < 0) + * the "REFERENCE_LIST" array already exists, open it and extend it + *------------------------------------------------------------------------- + */ + else if (has_reflist == 1) { + if ((aid = H5Aopen(dsid, REFERENCE_LIST, H5P_DEFAULT)) < 0) goto out; - if((tid = H5Aget_type(aid)) < 0) + if ((tid = H5Aget_type(aid)) < 0) goto out; /* get native type to read attribute REFERENCE_LIST */ - if((ntid = H5DS_get_REFLIST_type()) < 0) + if ((ntid = H5DS_get_REFLIST_type()) < 0) goto out; /* get and save the old reference(s) */ - if((sid = H5Aget_space(aid)) < 0) + if ((sid = H5Aget_space(aid)) < 0) goto out; - if((nelmts = H5Sget_simple_extent_npoints(sid)) < 0) + if ((nelmts = H5Sget_simple_extent_npoints(sid)) < 0) goto out; nelmts++; - dsbuf = (ds_list_t*) HDmalloc((size_t)nelmts * sizeof(ds_list_t)); - if(dsbuf == NULL) + dsbuf = (ds_list_t *)HDmalloc((size_t)nelmts * sizeof(ds_list_t)); + if (dsbuf == NULL) goto out; - if(H5Aread(aid, ntid, dsbuf) < 0) + if (H5Aread(aid, ntid, dsbuf) < 0) goto out; /* close */ - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; - if(H5Aclose(aid) < 0) + if (H5Aclose(aid) < 0) goto out; /*------------------------------------------------------------------------- - * create a new attribute - *------------------------------------------------------------------------- - */ + * create a new attribute + *------------------------------------------------------------------------- + */ /* the attribute must be deleted, in order to the new one can reflect the changes*/ - if(H5Adelete(dsid, REFERENCE_LIST) < 0) + if (H5Adelete(dsid, REFERENCE_LIST) < 0) goto out; /* store the IDX information (index of the dataset that has the DS) */ - dsl.dim_idx = idx; + dsl.dim_idx = idx; dsbuf[nelmts - 1] = dsl; /* create a new data space for the new references array */ dims[0] = (hsize_t)nelmts; - if((sid = H5Screate_simple(1, dims, NULL)) < 0) + if ((sid = H5Screate_simple(1, dims, NULL)) < 0) goto out; /* create the attribute again with the changes of space */ - if((aid = H5Acreate2(dsid, REFERENCE_LIST, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((aid = H5Acreate2(dsid, REFERENCE_LIST, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; /* write the attribute with the new references */ - if(H5Awrite(aid, ntid, dsbuf) < 0) + if (H5Awrite(aid, ntid, dsbuf) < 0) goto out; /* close */ - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; - if(H5Tclose(tid) < 0) + if (H5Tclose(tid) < 0) goto out; - if(H5Aclose(aid) < 0) + if (H5Aclose(aid) < 0) goto out; if (H5Tclose(ntid) < 0) goto out; @@ -504,15 +496,15 @@ herr_t H5DSattach_scale(hid_t did, } /* has_reflist */ /*------------------------------------------------------------------------- - * write the standard attributes for a Dimension Scale dataset - *------------------------------------------------------------------------- - */ + * write the standard attributes for a Dimension Scale dataset + *------------------------------------------------------------------------- + */ - if((is_ds=H5DSis_scale(dsid)) < 0) + if ((is_ds = H5DSis_scale(dsid)) < 0) return FAIL; - if(is_ds == 0) { - if (H5LT_set_attribute_string(dsid,"CLASS",DIMENSION_SCALE_CLASS) < 0) + if (is_ds == 0) { + if (H5LT_set_attribute_string(dsid, "CLASS", DIMENSION_SCALE_CLASS) < 0) return FAIL; } @@ -520,54 +512,55 @@ herr_t H5DSattach_scale(hid_t did, /* error zone */ out: - if(buf) + if (buf) HDfree(buf); - if(dsbuf) + if (dsbuf) HDfree(dsbuf); - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Sclose(sid); H5Aclose(aid); H5Tclose(ntid); H5Tclose(tid); - } H5E_END_TRY; + } + H5E_END_TRY; return FAIL; } /*------------------------------------------------------------------------- -* Function: H5DSdetach_scale -* -* Purpose: If possible, deletes association of Dimension Scale DSID with -* dimension IDX of Dataset DID. This deletes the entries in the -* DIMENSION_LIST and REFERENCE_LIST attributes. -* -* Return: -* Success: SUCCEED -* Failure: FAIL -* -* Fails if: Bad arguments -* The dataset DID or DSID do not exist. -* The DSID is not a Dimension Scale -* DSID is not attached to DID. -* Note that a scale may be associated with more than dimension of the same dataset. -* If so, the detach operation only deletes one of the associations, for DID. -* -* Programmer: pvn@ncsa.uiuc.edu -* -* Date: December 20, 2004 -* -* Comments: -* -* Modifications: Function didn't delete DIMENSION_LIST attribute, when -* all dimension scales were detached from a dataset; added. -* 2010/05/13 EIP -* -*------------------------------------------------------------------------- -*/ - -herr_t H5DSdetach_scale(hid_t did, - hid_t dsid, - unsigned int idx) + * Function: H5DSdetach_scale + * + * Purpose: If possible, deletes association of Dimension Scale DSID with + * dimension IDX of Dataset DID. This deletes the entries in the + * DIMENSION_LIST and REFERENCE_LIST attributes. + * + * Return: + * Success: SUCCEED + * Failure: FAIL + * + * Fails if: Bad arguments + * The dataset DID or DSID do not exist. + * The DSID is not a Dimension Scale + * DSID is not attached to DID. + * Note that a scale may be associated with more than dimension of the same dataset. + * If so, the detach operation only deletes one of the associations, for DID. + * + * Programmer: pvn@ncsa.uiuc.edu + * + * Date: December 20, 2004 + * + * Comments: + * + * Modifications: Function didn't delete DIMENSION_LIST attribute, when + * all dimension scales were detached from a dataset; added. + * 2010/05/13 EIP + * + *------------------------------------------------------------------------- + */ + +herr_t +H5DSdetach_scale(hid_t did, hid_t dsid, unsigned int idx) { int has_dimlist; int has_reflist; @@ -575,14 +568,14 @@ herr_t H5DSdetach_scale(hid_t did, hid_t dsid_j; /* DS dataset ID in DIMENSION_LIST */ hid_t did_i; /* dataset ID in REFERENCE_LIST */ hid_t sid; /* space ID */ - hid_t tid = -1; /* attribute type ID */ + hid_t tid = -1; /* attribute type ID */ hid_t ntid = -1; /* attribute native type ID */ - hid_t aid = -1; /* attribute ID */ + hid_t aid = -1; /* attribute ID */ int rank; /* rank of dataset */ - ds_list_t *dsbuf = NULL; /* array of attribute data in the DS pointing to the dataset */ + ds_list_t *dsbuf = NULL; /* array of attribute data in the DS pointing to the dataset */ hsize_t dims[1]; /* dimension of the "REFERENCE_LIST" array */ hobj_ref_t ref; /* reference to the DS */ - hvl_t *buf = NULL; /* VL buffer to store in the attribute */ + hvl_t * buf = NULL; /* VL buffer to store in the attribute */ int i; size_t j; hssize_t ii; @@ -592,41 +585,40 @@ herr_t H5DSdetach_scale(hid_t did, htri_t is_scale; /*------------------------------------------------------------------------- - * parameter checking - *------------------------------------------------------------------------- - */ + * parameter checking + *------------------------------------------------------------------------- + */ /* check for valid types of identifiers */ - if(H5I_DATASET!=H5Iget_type(did) || H5I_DATASET!=H5Iget_type(dsid)) + if (H5I_DATASET != H5Iget_type(did) || H5I_DATASET != H5Iget_type(dsid)) return FAIL; - if((is_scale = H5DSis_scale(did)) < 0) + if ((is_scale = H5DSis_scale(did)) < 0) return FAIL; /* the dataset cannot be a DS dataset */ - if( is_scale == 1) + if (is_scale == 1) return FAIL; /* get info for the dataset in the parameter list */ - if(H5Oget_info(did, &did_oi) < 0) + if (H5Oget_info(did, &did_oi) < 0) return FAIL; /* get info for the scale in the parameter list */ - if(H5Oget_info(dsid, &dsid_oi) < 0) + if (H5Oget_info(dsid, &dsid_oi) < 0) return FAIL; /* same object, not valid */ - if(did_oi.fileno == dsid_oi.fileno && did_oi.addr == dsid_oi.addr) + if (did_oi.fileno == dsid_oi.fileno && did_oi.addr == dsid_oi.addr) return FAIL; - /*------------------------------------------------------------------------- - * Find "DIMENSION_LIST" - *------------------------------------------------------------------------- - */ + * Find "DIMENSION_LIST" + *------------------------------------------------------------------------- + */ /* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ - if ((has_dimlist = H5LT_find_attribute(did,DIMENSION_LIST)) < 0) + if ((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0) return FAIL; if (has_dimlist == 0) @@ -637,7 +629,7 @@ herr_t H5DSdetach_scale(hid_t did, return FAIL; /* get rank */ - if ((rank=H5Sget_simple_extent_ndims(sid)) < 0) + if ((rank = H5Sget_simple_extent_ndims(sid)) < 0) goto out; /* close dataset space */ @@ -645,58 +637,56 @@ herr_t H5DSdetach_scale(hid_t did, return FAIL; /* parameter range checking */ - if (idx>(unsigned)rank-1) + if (idx > (unsigned)rank - 1) return FAIL; /*------------------------------------------------------------------------- - * find "REFERENCE_LIST" - *------------------------------------------------------------------------- - */ + * find "REFERENCE_LIST" + *------------------------------------------------------------------------- + */ /* try to find the attribute "REFERENCE_LIST" on the >>DS<< dataset */ - if((has_reflist = H5LT_find_attribute(dsid, REFERENCE_LIST)) < 0) + if ((has_reflist = H5LT_find_attribute(dsid, REFERENCE_LIST)) < 0) return FAIL; - if(has_reflist == 0) + if (has_reflist == 0) return FAIL; /*------------------------------------------------------------------------- - * open "DIMENSION_LIST", and delete the reference - *------------------------------------------------------------------------- - */ + * open "DIMENSION_LIST", and delete the reference + *------------------------------------------------------------------------- + */ - if((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0) + if ((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0) return FAIL; - if((tid = H5Aget_type(aid)) < 0) + if ((tid = H5Aget_type(aid)) < 0) goto out; - if((sid = H5Aget_space(aid)) < 0) + if ((sid = H5Aget_space(aid)) < 0) goto out; /* allocate and initialize the VL */ buf = (hvl_t *)HDmalloc((size_t)rank * sizeof(hvl_t)); - if(buf == NULL) + if (buf == NULL) goto out; /* read */ - if(H5Aread(aid, tid, buf) < 0) + if (H5Aread(aid, tid, buf) < 0) goto out; /* reset */ - if ( buf[idx].len > 0 ) - { - for (j=0; j<buf[idx].len; j++) - { + if (buf[idx].len > 0) { + for (j = 0; j < buf[idx].len; j++) { /* get the reference */ ref = ((hobj_ref_t *)buf[idx].p)[j]; /* get the DS id */ - if ((dsid_j = H5Rdereference(did,H5R_OBJECT,&ref)) < 0) + if ((dsid_j = H5Rdereference(did, H5R_OBJECT, &ref)) < 0) goto out; /* get info for this DS */ - if(H5Oget_info(dsid_j, &tmp_oi) < 0) + if (H5Oget_info(dsid_j, &tmp_oi) < 0) goto out; /* Close the dereferenced dataset */ @@ -704,125 +694,123 @@ herr_t H5DSdetach_scale(hid_t did, goto out; /* same object, reset */ - if(dsid_oi.fileno == tmp_oi.fileno && dsid_oi.addr == tmp_oi.addr) - { - /* If there are more than one reference in the VL element + if (dsid_oi.fileno == tmp_oi.fileno && dsid_oi.addr == tmp_oi.addr) { + /* If there are more than one reference in the VL element and the reference we found is not the last one, copy the last one to replace the found one since the order - of the references doesn't matter according to the spec; - reduce the size of the VL element by 1; - if the length of the element becomes 0, free the pointer + of the references doesn't matter according to the spec; + reduce the size of the VL element by 1; + if the length of the element becomes 0, free the pointer and reset to NULL */ size_t len = buf[idx].len; - if(j < len - 1) - ((hobj_ref_t *)buf[idx].p)[j] = ((hobj_ref_t *)buf[idx].p)[len-1]; + if (j < len - 1) + ((hobj_ref_t *)buf[idx].p)[j] = ((hobj_ref_t *)buf[idx].p)[len - 1]; len = --buf[idx].len; - if(len == 0) { - HDfree(buf[idx].p); + if (len == 0) { + HDfree(buf[idx].p); buf[idx].p = NULL; } - /* Since a reference to a dim. scale can be inserted only once, + /* Since a reference to a dim. scale can be inserted only once, we do not need to continue the search if it is found */ found_ds = 1; break; } } /* j */ - } /* if */ + } /* if */ /* the scale must be present to continue */ - if(found_ds == 0) + if (found_ds == 0) goto out; /* Write the attribute, but check first, if we have any scales left, - because if not, we should delete the attribute according to the spec */ - for(i = 0; i < rank; i++) { - if(buf[i].len > 0) { + because if not, we should delete the attribute according to the spec */ + for (i = 0; i < rank; i++) { + if (buf[i].len > 0) { have_ds = 1; - break; + break; } } - if(have_ds) { - if(H5Awrite(aid, tid, buf) < 0) - goto out; + if (have_ds) { + if (H5Awrite(aid, tid, buf) < 0) + goto out; } else { - if(H5Adelete(did, DIMENSION_LIST) < 0) + if (H5Adelete(did, DIMENSION_LIST) < 0) goto out; } /* close */ - if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) + if (H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) goto out; - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; - if(H5Tclose(tid) < 0) + if (H5Tclose(tid) < 0) goto out; - if(H5Aclose(aid) < 0) + if (H5Aclose(aid) < 0) goto out; HDfree(buf); buf = NULL; - /*------------------------------------------------------------------------- - * the "REFERENCE_LIST" array exists, update - *------------------------------------------------------------------------- - */ + * the "REFERENCE_LIST" array exists, update + *------------------------------------------------------------------------- + */ - if((aid = H5Aopen(dsid, REFERENCE_LIST, H5P_DEFAULT)) < 0) + if ((aid = H5Aopen(dsid, REFERENCE_LIST, H5P_DEFAULT)) < 0) goto out; - if((tid = H5Aget_type(aid)) < 0) + if ((tid = H5Aget_type(aid)) < 0) goto out; /* get native type to read attribute REFERENCE_LIST */ - if((ntid = H5DS_get_REFLIST_type()) < 0) + if ((ntid = H5DS_get_REFLIST_type()) < 0) goto out; /* get and save the old reference(s) */ - if((sid = H5Aget_space(aid)) < 0) + if ((sid = H5Aget_space(aid)) < 0) goto out; - if((nelmts = H5Sget_simple_extent_npoints(sid)) < 0) + if ((nelmts = H5Sget_simple_extent_npoints(sid)) < 0) goto out; - dsbuf = (ds_list_t*) HDmalloc((size_t)nelmts * sizeof(ds_list_t)); - if(dsbuf == NULL) + dsbuf = (ds_list_t *)HDmalloc((size_t)nelmts * sizeof(ds_list_t)); + if (dsbuf == NULL) goto out; - if(H5Aread(aid, ntid, dsbuf) < 0) + if (H5Aread(aid, ntid, dsbuf) < 0) goto out; - for(ii=0; ii<nelmts; ii++) { + for (ii = 0; ii < nelmts; ii++) { /* First check if we have the same dimension index */ - if(idx == dsbuf[ii].dim_idx) { + if (idx == dsbuf[ii].dim_idx) { /* get the reference to the dataset */ ref = dsbuf[ii].ref; /* get the dataset id */ - if ((did_i = H5Rdereference(did,H5R_OBJECT,&ref)) < 0) + if ((did_i = H5Rdereference(did, H5R_OBJECT, &ref)) < 0) goto out; /* get info for this dataset */ - if(H5Oget_info(did_i, &tmp_oi) < 0) + if (H5Oget_info(did_i, &tmp_oi) < 0) goto out; /* close the dereferenced dataset */ - if(H5Dclose(did_i) < 0) + if (H5Dclose(did_i) < 0) goto out; /* same object, reset. we want to detach only for this DIM */ - if(did_oi.fileno == tmp_oi.fileno && did_oi.addr == tmp_oi.addr) { + if (did_oi.fileno == tmp_oi.fileno && did_oi.addr == tmp_oi.addr) { /* copy the last one to replace the one which is found */ - dsbuf[ii] = dsbuf[nelmts-1]; + dsbuf[ii] = dsbuf[nelmts - 1]; nelmts--; - found_dset=1; + found_dset = 1; break; } /* if */ - } /* if we have the same dimension index */ - } /* ii */ + } /* if we have the same dimension index */ + } /* ii */ /* close space and attribute */ if (H5Sclose(sid) < 0) @@ -831,44 +819,43 @@ herr_t H5DSdetach_scale(hid_t did, goto out; /*------------------------------------------------------------------------- - * check if we found the pointed dataset - *------------------------------------------------------------------------- - */ + * check if we found the pointed dataset + *------------------------------------------------------------------------- + */ /* the pointed dataset must exist */ if (found_dset == 0) goto out; /*------------------------------------------------------------------------- - * create a new attribute - *------------------------------------------------------------------------- - */ + * create a new attribute + *------------------------------------------------------------------------- + */ /* the attribute must be deleted, in order to the new one can reflect the changes*/ if (H5Adelete(dsid, REFERENCE_LIST) < 0) goto out; /* don't do anything for an empty array */ - if(nelmts) - { + if (nelmts) { /* create a new data space for the new references array */ - dims[0] = (hsize_t)nelmts; + dims[0] = (hsize_t)nelmts; - if((sid = H5Screate_simple(1, dims, NULL)) < 0) + if ((sid = H5Screate_simple(1, dims, NULL)) < 0) goto out; /* create the attribute again with the changes of space */ - if((aid = H5Acreate2(dsid, REFERENCE_LIST, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((aid = H5Acreate2(dsid, REFERENCE_LIST, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; /* write the new attribute with the new references */ - if(H5Awrite(aid, ntid, dsbuf) < 0) + if (H5Awrite(aid, ntid, dsbuf) < 0) goto out; /* close space and attribute */ - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; - if(H5Aclose(aid) < 0) + if (H5Aclose(aid) < 0) goto out; } /* nelmts */ @@ -885,103 +872,103 @@ herr_t H5DSdetach_scale(hid_t did, /* error zone */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Sclose(sid); H5Aclose(aid); H5Tclose(ntid); H5Tclose(tid); - if(dsbuf) { + if (dsbuf) { HDfree(dsbuf); dsbuf = NULL; } - if(buf) { + if (buf) { /* Failure occured before H5Dvlen_reclaim was called; free the pointers allocated when we read data in */ - for(i = 0; i < rank; i++) { - if(buf[i].p) + for (i = 0; i < rank; i++) { + if (buf[i].p) HDfree(buf[i].p); } HDfree(buf); buf = NULL; } - } H5E_END_TRY; + } + H5E_END_TRY; return FAIL; - } /*------------------------------------------------------------------------- -* Function: H5DSis_attached -* -* Purpose: Report if dimension scale DSID is currently attached to -* dimension IDX of dataset DID by checking if DID has a pointer in the REFERENCE_LIST -* attribute and DSID (scale ) has a pointer in the DIMENSION_LIST attribute -* -* Return: -* 1: both the DS and the dataset pointers match -* 0: one of them or both do not match -* FAIL (-1): error -* -* Fails if: Bad arguments -* If DSID is not a Dimension Scale -* If DID is a Dimension Scale (A Dimension Scale cannot have scales) -* -* Programmer: pvn@ncsa.uiuc.edu -* -* Date: February 18, 2005 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -htri_t H5DSis_attached(hid_t did, - hid_t dsid, - unsigned int idx) + * Function: H5DSis_attached + * + * Purpose: Report if dimension scale DSID is currently attached to + * dimension IDX of dataset DID by checking if DID has a pointer in the REFERENCE_LIST + * attribute and DSID (scale ) has a pointer in the DIMENSION_LIST attribute + * + * Return: + * 1: both the DS and the dataset pointers match + * 0: one of them or both do not match + * FAIL (-1): error + * + * Fails if: Bad arguments + * If DSID is not a Dimension Scale + * If DID is a Dimension Scale (A Dimension Scale cannot have scales) + * + * Programmer: pvn@ncsa.uiuc.edu + * + * Date: February 18, 2005 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +htri_t +H5DSis_attached(hid_t did, hid_t dsid, unsigned int idx) { int has_dimlist; int has_reflist; hssize_t nelmts; hid_t sid; /* space ID */ - hid_t tid = -1; /* attribute type ID */ + hid_t tid = -1; /* attribute type ID */ hid_t ntid = -1; /* attribute native type ID */ - hid_t aid = -1; /* attribute ID */ + hid_t aid = -1; /* attribute ID */ int rank; /* rank of dataset */ - ds_list_t *dsbuf = NULL; /* array of attribute data in the DS pointing to the dataset */ + ds_list_t *dsbuf = NULL; /* array of attribute data in the DS pointing to the dataset */ hobj_ref_t ref; /* reference to the DS */ - hvl_t *buf = NULL; /* VL buffer to store in the attribute */ + hvl_t * buf = NULL; /* VL buffer to store in the attribute */ hid_t dsid_j; /* DS dataset ID in DIMENSION_LIST */ hid_t did_i; /* dataset ID in REFERENCE_LIST */ H5O_info_t oi1, oi2, oi3, oi4; H5I_type_t it1, it2; int i; - int found_dset=0, found_ds=0; + int found_dset = 0, found_ds = 0; htri_t is_scale; /*------------------------------------------------------------------------- - * parameter checking - *------------------------------------------------------------------------- - */ + * parameter checking + *------------------------------------------------------------------------- + */ if ((is_scale = H5DSis_scale(did)) < 0) return FAIL; /* the dataset cannot be a DS dataset */ - if ( is_scale == 1) + if (is_scale == 1) return FAIL; /* get info for the dataset in the parameter list */ - if(H5Oget_info(did, &oi1) < 0) + if (H5Oget_info(did, &oi1) < 0) return FAIL; /* get info for the scale in the parameter list */ - if(H5Oget_info(dsid, &oi2) < 0) + if (H5Oget_info(dsid, &oi2) < 0) return FAIL; /* same object, not valid */ - if(oi1.fileno == oi2.fileno && oi1.addr == oi2.addr) + if (oi1.fileno == oi2.fileno && oi1.addr == oi2.addr) return FAIL; /* get ID type */ @@ -990,20 +977,20 @@ htri_t H5DSis_attached(hid_t did, if ((it2 = H5Iget_type(dsid)) < 0) return FAIL; - if (H5I_DATASET!=it1 || H5I_DATASET!=it2) + if (H5I_DATASET != it1 || H5I_DATASET != it2) return FAIL; /*------------------------------------------------------------------------- - * get space - *------------------------------------------------------------------------- - */ + * get space + *------------------------------------------------------------------------- + */ /* get dataset space */ if ((sid = H5Dget_space(did)) < 0) return FAIL; /* get rank */ - if ((rank=H5Sget_simple_extent_ndims(sid)) < 0) + if ((rank = H5Sget_simple_extent_ndims(sid)) < 0) goto out; /* close dataset space */ @@ -1011,69 +998,65 @@ htri_t H5DSis_attached(hid_t did, goto out; /* parameter range checking */ - if(idx > ((unsigned)rank - 1)) + if (idx > ((unsigned)rank - 1)) return FAIL; /* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ - if((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0) + if ((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0) return FAIL; /*------------------------------------------------------------------------- - * open "DIMENSION_LIST" - *------------------------------------------------------------------------- - */ + * open "DIMENSION_LIST" + *------------------------------------------------------------------------- + */ - if(has_dimlist == 1) - { - if((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0) + if (has_dimlist == 1) { + if ((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0) goto out; - if((tid = H5Aget_type(aid)) < 0) + if ((tid = H5Aget_type(aid)) < 0) goto out; - if((sid = H5Aget_space(aid)) < 0) + if ((sid = H5Aget_space(aid)) < 0) goto out; /* allocate and initialize the VL */ - buf = (hvl_t*)HDmalloc((size_t)rank * sizeof(hvl_t)); - if(buf == NULL) + buf = (hvl_t *)HDmalloc((size_t)rank * sizeof(hvl_t)); + if (buf == NULL) goto out; /* read */ - if (H5Aread(aid,tid,buf) < 0) + if (H5Aread(aid, tid, buf) < 0) goto out; /* iterate all the REFs in this dimension IDX */ - for (i=0; i<(int)buf[idx].len; i++) - { + for (i = 0; i < (int)buf[idx].len; i++) { /* get the reference */ ref = ((hobj_ref_t *)buf[idx].p)[i]; /* get the scale id for this REF */ - if ((dsid_j = H5Rdereference(did,H5R_OBJECT,&ref)) < 0) + if ((dsid_j = H5Rdereference(did, H5R_OBJECT, &ref)) < 0) goto out; /* get info for DS in the parameter list */ - if(H5Oget_info(dsid, &oi1) < 0) + if (H5Oget_info(dsid, &oi1) < 0) goto out; /* get info for this DS */ - if(H5Oget_info(dsid_j, &oi2) < 0) + if (H5Oget_info(dsid_j, &oi2) < 0) goto out; /* same object */ - if(oi1.fileno == oi2.fileno && oi1.addr == oi2.addr) + if (oi1.fileno == oi2.fileno && oi1.addr == oi2.addr) found_ds = 1; /* close the dereferenced dataset */ if (H5Dclose(dsid_j) < 0) goto out; - } - /* close */ - if (H5Dvlen_reclaim(tid,sid,H5P_DEFAULT,buf) < 0) + if (H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) goto out; if (H5Sclose(sid) < 0) goto out; @@ -1086,81 +1069,77 @@ htri_t H5DSis_attached(hid_t did, } /* has_dimlist */ /*------------------------------------------------------------------------- - * info on the >>DS<< dataset - *------------------------------------------------------------------------- - */ + * info on the >>DS<< dataset + *------------------------------------------------------------------------- + */ /* try to find the attribute "REFERENCE_LIST" on the >>DS<< dataset */ - if((has_reflist = H5LT_find_attribute(dsid, REFERENCE_LIST)) < 0) + if ((has_reflist = H5LT_find_attribute(dsid, REFERENCE_LIST)) < 0) goto out; /*------------------------------------------------------------------------- - * open "REFERENCE_LIST" - *------------------------------------------------------------------------- - */ + * open "REFERENCE_LIST" + *------------------------------------------------------------------------- + */ - if(has_reflist == 1) - { - if((aid = H5Aopen(dsid, REFERENCE_LIST, H5P_DEFAULT)) < 0) + if (has_reflist == 1) { + if ((aid = H5Aopen(dsid, REFERENCE_LIST, H5P_DEFAULT)) < 0) goto out; - if((tid = H5Aget_type(aid)) < 0) + if ((tid = H5Aget_type(aid)) < 0) goto out; /* get native type to read REFERENCE_LIST attribute */ - if((ntid = H5DS_get_REFLIST_type()) < 0) + if ((ntid = H5DS_get_REFLIST_type()) < 0) goto out; /* get and save the old reference(s) */ - if((sid = H5Aget_space(aid)) < 0) + if ((sid = H5Aget_space(aid)) < 0) goto out; - if((nelmts = H5Sget_simple_extent_npoints(sid)) < 0) + if ((nelmts = H5Sget_simple_extent_npoints(sid)) < 0) goto out; - dsbuf = (ds_list_t*) HDmalloc((size_t)nelmts * sizeof(ds_list_t)); + dsbuf = (ds_list_t *)HDmalloc((size_t)nelmts * sizeof(ds_list_t)); if (dsbuf == NULL) goto out; - if (H5Aread(aid,ntid,dsbuf) < 0) + if (H5Aread(aid, ntid, dsbuf) < 0) goto out; /*------------------------------------------------------------------------- - * iterate - *------------------------------------------------------------------------- - */ + * iterate + *------------------------------------------------------------------------- + */ - for(i=0; i<nelmts; i++) - { + for (i = 0; i < nelmts; i++) { /* get the reference */ ref = dsbuf[i].ref; /* the reference was not deleted */ - if (ref) - { + if (ref) { /* get the dataset id */ - if ((did_i = H5Rdereference(did,H5R_OBJECT,&ref)) < 0) + if ((did_i = H5Rdereference(did, H5R_OBJECT, &ref)) < 0) goto out; /* get info for dataset in the parameter list */ - if(H5Oget_info(did, &oi3) < 0) + if (H5Oget_info(did, &oi3) < 0) goto out; /* get info for this dataset */ - if(H5Oget_info(did_i, &oi4) < 0) + if (H5Oget_info(did_i, &oi4) < 0) goto out; /* same object */ - if(oi3.fileno == oi4.fileno && oi3.addr == oi4.addr && idx==dsbuf[i].dim_idx) - found_dset=1; + if (oi3.fileno == oi4.fileno && oi3.addr == oi4.addr && idx == dsbuf[i].dim_idx) + found_dset = 1; /* close the dereferenced dataset */ if (H5Dclose(did_i) < 0) goto out; } /* if */ - } /* i */ - + } /* i */ /* close */ if (H5Sclose(sid) < 0) @@ -1183,18 +1162,20 @@ htri_t H5DSis_attached(hid_t did, /* error zone */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Sclose(sid); H5Aclose(aid); H5Tclose(tid); H5Tclose(ntid); - } H5E_END_TRY; + } + H5E_END_TRY; if (buf) { HDfree(buf); buf = NULL; } - if(dsbuf) { + if (dsbuf) { HDfree(dsbuf); dsbuf = NULL; } @@ -1202,88 +1183,84 @@ out: } /*------------------------------------------------------------------------- -* Function: H5DSiterate_scales -* -* Purpose: H5DSiterate_scales iterates over the scales attached to dimension DIM -* of dataset DID. For each scale in the list, the visitor_data and some -* additional information, specified below, are passed to the visitor function. -* The iteration begins with the IDX object in the group and the next element -* to be processed by the operator is returned in IDX. If IDX is NULL, then the -* iterator starts at zero. -* -* Parameters: -* -* hid_t DID; IN: the dataset -* unsigned int DIM; IN: the dimension of the dataset -* int *DS_IDX; IN/OUT: on input the dimension scale index to start iterating, -* on output the next index to visit. If NULL, start at -* the first position. -* H5DS_iterate_t VISITOR; IN: the visitor function -* void *VISITOR_DATA; IN: arbitrary data to pass to the visitor function. -* -* Iterate over all scales of DIM, calling an application callback -* with the item, key and any operator data. -* -* The operator callback receives a pointer to the item , -* and the pointer to the operator data passed -* in to H5SL_iterate ('op_data'). The return values from an operator are: -* A. Zero causes the iterator to continue, returning zero when all -* nodes of that type have been processed. -* B. Positive causes the iterator to immediately return that positive -* value, indicating short-circuit success. -* C. Negative causes the iterator to immediately return that value, -* indicating failure. -* -* Programmer: pvn@ncsa.uiuc.edu -* -* Date: January 31, 2005 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5DSiterate_scales(hid_t did, - unsigned int dim, - int *ds_idx, - H5DS_iterate_t visitor, - void *visitor_data ) + * Function: H5DSiterate_scales + * + * Purpose: H5DSiterate_scales iterates over the scales attached to dimension DIM + * of dataset DID. For each scale in the list, the visitor_data and some + * additional information, specified below, are passed to the visitor function. + * The iteration begins with the IDX object in the group and the next element + * to be processed by the operator is returned in IDX. If IDX is NULL, then the + * iterator starts at zero. + * + * Parameters: + * + * hid_t DID; IN: the dataset + * unsigned int DIM; IN: the dimension of the dataset + * int *DS_IDX; IN/OUT: on input the dimension scale index to start iterating, + * on output the next index to visit. If NULL, start at + * the first position. + * H5DS_iterate_t VISITOR; IN: the visitor function + * void *VISITOR_DATA; IN: arbitrary data to pass to the visitor function. + * + * Iterate over all scales of DIM, calling an application callback + * with the item, key and any operator data. + * + * The operator callback receives a pointer to the item , + * and the pointer to the operator data passed + * in to H5SL_iterate ('op_data'). The return values from an operator are: + * A. Zero causes the iterator to continue, returning zero when all + * nodes of that type have been processed. + * B. Positive causes the iterator to immediately return that positive + * value, indicating short-circuit success. + * C. Negative causes the iterator to immediately return that value, + * indicating failure. + * + * Programmer: pvn@ncsa.uiuc.edu + * + * Date: January 31, 2005 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5DSiterate_scales(hid_t did, unsigned int dim, int *ds_idx, H5DS_iterate_t visitor, void *visitor_data) { - hid_t scale_id; - int rank; - hobj_ref_t ref; /* reference to the DS */ - hid_t sid; /* space ID */ - hid_t tid = -1; /* attribute type ID */ - hid_t aid = -1; /* attribute ID */ - hvl_t *buf = NULL; /* VL buffer to store in the attribute */ - H5I_type_t it; /* ID type */ - herr_t ret_value=0; - int j_idx; - int nscales; - int has_dimlist; - int i; + hid_t scale_id; + int rank; + hobj_ref_t ref; /* reference to the DS */ + hid_t sid; /* space ID */ + hid_t tid = -1; /* attribute type ID */ + hid_t aid = -1; /* attribute ID */ + hvl_t * buf = NULL; /* VL buffer to store in the attribute */ + H5I_type_t it; /* ID type */ + herr_t ret_value = 0; + int j_idx; + int nscales; + int has_dimlist; + int i; /*------------------------------------------------------------------------- - * parameter checking - *------------------------------------------------------------------------- - */ + * parameter checking + *------------------------------------------------------------------------- + */ /* get ID type */ if ((it = H5Iget_type(did)) < 0) return FAIL; - if (H5I_DATASET!=it) + if (H5I_DATASET != it) return FAIL; /* get the number of scales assotiated with this DIM */ - if ((nscales = H5DSget_num_scales(did,dim)) < 0) + if ((nscales = H5DSget_num_scales(did, dim)) < 0) return FAIL; /* parameter range checking */ - if (ds_idx!=NULL) - { - if (*ds_idx>=nscales) + if (ds_idx != NULL) { + if (*ds_idx >= nscales) return FAIL; } @@ -1292,70 +1269,67 @@ herr_t H5DSiterate_scales(hid_t did, return FAIL; /* get rank */ - if ((rank=H5Sget_simple_extent_ndims(sid)) < 0) + if ((rank = H5Sget_simple_extent_ndims(sid)) < 0) goto out; /* close dataset space */ - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; - if ( dim >= (unsigned)rank ) + if (dim >= (unsigned)rank) return FAIL; /* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ - if((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0) + if ((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0) return FAIL; - if(has_dimlist == 0) + if (has_dimlist == 0) return SUCCEED; - else if(has_dimlist == 1) - { - if((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0) + else if (has_dimlist == 1) { + if ((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0) goto out; - if((tid = H5Aget_type(aid)) < 0) + if ((tid = H5Aget_type(aid)) < 0) goto out; - if((sid = H5Aget_space(aid)) < 0) + if ((sid = H5Aget_space(aid)) < 0) goto out; /* allocate and initialize the VL */ - buf = (hvl_t*)HDmalloc((size_t)rank * sizeof(hvl_t)); + buf = (hvl_t *)HDmalloc((size_t)rank * sizeof(hvl_t)); - if(buf == NULL) + if (buf == NULL) goto out; /* read */ - if(H5Aread(aid, tid, buf) < 0) + if (H5Aread(aid, tid, buf) < 0) goto out; - if ( buf[dim].len > 0 ) - { - if (ds_idx!=NULL) + if (buf[dim].len > 0) { + if (ds_idx != NULL) j_idx = *ds_idx; else - j_idx=0; + j_idx = 0; /* iterate */ - for(i=j_idx; i<nscales; i++) - { + for (i = j_idx; i < nscales; i++) { /* get the reference */ - ref = ((hobj_ref_t *)buf[dim].p)[ i ]; + ref = ((hobj_ref_t *)buf[dim].p)[i]; /* disable error reporting, the ID might refer to a deleted dataset */ - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { /* get the DS id */ - if ((scale_id = H5Rdereference(did,H5R_OBJECT,&ref)) < 0) + if ((scale_id = H5Rdereference(did, H5R_OBJECT, &ref)) < 0) goto out; - } H5E_END_TRY; + } + H5E_END_TRY; /* set the return IDX OUT value at current scale index */ - if (ds_idx!=NULL) - { + if (ds_idx != NULL) { *ds_idx = i; } - if((ret_value=(visitor)(did,dim,scale_id,visitor_data))!=0) - { + if ((ret_value = (visitor)(did, dim, scale_id, visitor_data)) != 0) { /* break */ /* close the DS id */ @@ -1370,10 +1344,10 @@ herr_t H5DSiterate_scales(hid_t did, goto out; } /* i */ - } /* if */ + } /* if */ /* close */ - if (H5Dvlen_reclaim(tid,sid,H5P_DEFAULT,buf) < 0) + if (H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) goto out; if (H5Sclose(sid) < 0) goto out; @@ -1389,55 +1363,58 @@ herr_t H5DSiterate_scales(hid_t did, return ret_value; out: - H5E_BEGIN_TRY { - if(buf) { - H5Dvlen_reclaim(tid,sid,H5P_DEFAULT,buf); + H5E_BEGIN_TRY + { + if (buf) { + H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf); HDfree(buf); } H5Sclose(sid); H5Aclose(aid); H5Tclose(tid); - } H5E_END_TRY; + } + H5E_END_TRY; return FAIL; } /*------------------------------------------------------------------------- -* Function: H5DSset_label -* -* Purpose: Set label for the dimension IDX of dataset DID to the value LABEL -* -* Return: Success: SUCCEED, Failure: FAIL -* -* Programmer: pvn@ncsa.uiuc.edu -* -* Date: January 11, 2005 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) + * Function: H5DSset_label + * + * Purpose: Set label for the dimension IDX of dataset DID to the value LABEL + * + * Return: Success: SUCCEED, Failure: FAIL + * + * Programmer: pvn@ncsa.uiuc.edu + * + * Date: January 11, 2005 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5DSset_label(hid_t did, unsigned int idx, const char *label) { - int has_labels; - hid_t sid = -1; /* space ID */ - hid_t tid = -1; /* attribute type ID */ - hid_t aid = -1; /* attribute ID */ - int rank; /* rank of dataset */ - hsize_t dims[1]; /* dimensions of dataset */ - H5I_type_t it; /* ID type */ - unsigned int i; - union { /* union is needed to eliminate compiler warnings about */ - char ** buf; /* discarding the 'const' qualifier in the free */ - char const ** const_buf; /* buf calls */ + int has_labels; + hid_t sid = -1; /* space ID */ + hid_t tid = -1; /* attribute type ID */ + hid_t aid = -1; /* attribute ID */ + int rank; /* rank of dataset */ + hsize_t dims[1]; /* dimensions of dataset */ + H5I_type_t it; /* ID type */ + unsigned int i; + union { /* union is needed to eliminate compiler warnings about */ + char ** buf; /* discarding the 'const' qualifier in the free */ + char const **const_buf; /* buf calls */ } u; /*------------------------------------------------------------------------- - * parameter checking - *------------------------------------------------------------------------- - */ + * parameter checking + *------------------------------------------------------------------------- + */ /* get ID type */ if ((it = H5Iget_type(did)) < 0) return FAIL; @@ -1445,10 +1422,10 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) if (H5I_DATASET != it) return FAIL; - if (label == NULL) + if (label == NULL) return FAIL; - /* get dataset space */ + /* get dataset space */ if ((sid = H5Dget_space(did)) < 0) return FAIL; @@ -1460,25 +1437,24 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) if (H5Sclose(sid) < 0) goto out; - if ( idx >= (unsigned)rank ) + if (idx >= (unsigned)rank) return FAIL; /*------------------------------------------------------------------------- - * attribute "DIMENSION_LABELS" - *------------------------------------------------------------------------- - */ + * attribute "DIMENSION_LABELS" + *------------------------------------------------------------------------- + */ /* try to find the attribute "DIMENSION_LABELS" on the >>data<< dataset */ if ((has_labels = H5LT_find_attribute(did, DIMENSION_LABELS)) < 0) return FAIL; /*------------------------------------------------------------------------- - * make the attribute and insert label - *------------------------------------------------------------------------- - */ + * make the attribute and insert label + *------------------------------------------------------------------------- + */ - if (has_labels == 0) - { + if (has_labels == 0) { dims[0] = (hsize_t)rank; /* space for the attribute */ @@ -1496,13 +1472,13 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) goto out; /* allocate and initialize */ - u.const_buf = (char const **) HDmalloc((size_t) rank * sizeof(char *)); + u.const_buf = (char const **)HDmalloc((size_t)rank * sizeof(char *)); if (u.const_buf == NULL) goto out; - for (i = 0; i < (unsigned int) rank; i++) - u.const_buf[i] = NULL; + for (i = 0; i < (unsigned int)rank; i++) + u.const_buf[i] = NULL; /* store the label information in the required index */ u.const_buf[idx] = label; @@ -1518,21 +1494,19 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) goto out; if (H5Aclose(aid) < 0) goto out; - if (u.const_buf) - { + if (u.const_buf) { HDfree(u.const_buf); u.const_buf = NULL; } } /*------------------------------------------------------------------------- - * just insert label - *------------------------------------------------------------------------- - */ + * just insert label + *------------------------------------------------------------------------- + */ + + else { - else - { - if ((aid = H5Aopen(did, DIMENSION_LABELS, H5P_DEFAULT)) < 0) goto out; @@ -1540,8 +1514,8 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) goto out; /* allocate and initialize */ - u.buf = (char **) HDmalloc((size_t) rank * sizeof(char *)); - + u.buf = (char **)HDmalloc((size_t)rank * sizeof(char *)); + if (u.buf == NULL) goto out; @@ -1564,8 +1538,7 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) u.buf[idx] = NULL; /* free all the ptr's from the H5Aread() */ - for (i = 0; i < (unsigned int) rank; i++) - { + for (i = 0; i < (unsigned int)rank; i++) { if (u.buf[i]) HDfree(u.buf[i]); } @@ -1575,8 +1548,7 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) goto out; if (H5Aclose(aid) < 0) goto out; - if (u.buf) - { + if (u.buf) { HDfree(u.buf); u.buf = NULL; } @@ -1587,13 +1559,11 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) /* error zone */ out: - if (u.buf) - { - if (u.buf[idx]) /* check if we errored during H5Awrite */ + if (u.buf) { + if (u.buf[idx]) /* check if we errored during H5Awrite */ u.buf[idx] = NULL; /* don't free label */ /* free all the ptr's from the H5Aread() */ - for (i = 0; i < (unsigned int) rank; i++) - { + for (i = 0; i < (unsigned int)rank; i++) { if (u.buf[i]) HDfree(u.buf[i]); } @@ -1604,50 +1574,52 @@ out: H5Sclose(sid); H5Aclose(aid); H5Tclose(tid); - }H5E_END_TRY; + } + H5E_END_TRY; return FAIL; } /*------------------------------------------------------------------------- -* Function: H5DSget_label -* -* Purpose: Read the label LABEL for dimension IDX of dataset DID -* Up to 'size' characters are stored in 'label' followed by a '\0' string -* terminator. If the label is longer than 'size'-1, -* the string terminator is stored in the last position of the buffer to -* properly terminate the string. -* -* Return: 0 if no label found, size of label if found, Failure: FAIL -* -* Programmer: pvn@ncsa.uiuc.edu -* -* Date: January 11, 2005 -* -* Comments: -* -* Modifications: -* JIRA HDFFV-7673: Added a check to see if the label name exists, -* if not then returns zero. July 30, 2011. MSB -* -*------------------------------------------------------------------------- -*/ -ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) + * Function: H5DSget_label + * + * Purpose: Read the label LABEL for dimension IDX of dataset DID + * Up to 'size' characters are stored in 'label' followed by a '\0' string + * terminator. If the label is longer than 'size'-1, + * the string terminator is stored in the last position of the buffer to + * properly terminate the string. + * + * Return: 0 if no label found, size of label if found, Failure: FAIL + * + * Programmer: pvn@ncsa.uiuc.edu + * + * Date: January 11, 2005 + * + * Comments: + * + * Modifications: + * JIRA HDFFV-7673: Added a check to see if the label name exists, + * if not then returns zero. July 30, 2011. MSB + * + *------------------------------------------------------------------------- + */ +ssize_t +H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) { int has_labels; - hid_t sid = -1; /* space ID */ - hid_t tid = -1; /* attribute type ID */ - hid_t aid = -1; /* attribute ID */ - int rank; /* rank of dataset */ - char **buf = NULL; /* buffer to store in the attribute */ - H5I_type_t it; /* ID type */ + hid_t sid = -1; /* space ID */ + hid_t tid = -1; /* attribute type ID */ + hid_t aid = -1; /* attribute ID */ + int rank; /* rank of dataset */ + char ** buf = NULL; /* buffer to store in the attribute */ + H5I_type_t it; /* ID type */ size_t nbytes = 0; size_t copy_len; int i; /*------------------------------------------------------------------------- - * parameter checking - *------------------------------------------------------------------------- - */ + * parameter checking + *------------------------------------------------------------------------- + */ /* get ID type */ if ((it = H5Iget_type(did)) < 0) return FAIL; @@ -1655,7 +1627,7 @@ ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) if (H5I_DATASET != it) return FAIL; - /* get dataset space */ + /* get dataset space */ if ((sid = H5Dget_space(did)) < 0) return FAIL; @@ -1667,41 +1639,39 @@ ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) if (H5Sclose(sid) < 0) goto out; - if ( idx >= (unsigned)rank ) + if (idx >= (unsigned)rank) return FAIL; /*------------------------------------------------------------------------- - * attribute "DIMENSION_LABELS" - *------------------------------------------------------------------------- - */ + * attribute "DIMENSION_LABELS" + *------------------------------------------------------------------------- + */ /* try to find the attribute "DIMENSION_LABELS" on the >>data<< dataset */ if ((has_labels = H5LT_find_attribute(did, DIMENSION_LABELS)) < 0) return FAIL; /* return 0 and NULL for label if no label found */ - if (has_labels == 0) - { + if (has_labels == 0) { if (label) label[0] = 0; return 0; } /*------------------------------------------------------------------------- - * open the attribute and read label - *------------------------------------------------------------------------- - */ + * open the attribute and read label + *------------------------------------------------------------------------- + */ - assert (has_labels == 1); + assert(has_labels == 1); if ((aid = H5Aopen(did, DIMENSION_LABELS, H5P_DEFAULT)) < 0) goto out; - if ((tid = H5Aget_type(aid)) < 0) goto out; /* allocate and initialize */ - buf = (char **) HDmalloc((size_t) rank * sizeof(char *)); + buf = (char **)HDmalloc((size_t)rank * sizeof(char *)); if (buf == NULL) goto out; @@ -1711,29 +1681,25 @@ ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) goto out; /* do only if the label name exists for the dimension */ - if (buf[idx] != NULL) - { + if (buf[idx] != NULL) { /* get the real string length */ - nbytes = strlen(buf[idx]); + nbytes = HDstrlen(buf[idx]); - /* compute the string length which will fit into the user's buffer */ - copy_len = MIN(size-1, nbytes); + /* compute the string length which will fit into the user's buffer */ + copy_len = MIN(size - 1, nbytes); - /* copy all/some of the name */ - if (label) - { - memcpy(label, buf[idx], copy_len); - - /* terminate the string */ - label[copy_len] = '\0'; - } + /* copy all/some of the name */ + if (label) { + HDmemcpy(label, buf[idx], copy_len); + /* terminate the string */ + label[copy_len] = '\0'; + } } /* free all the ptr's from the H5Aread() */ - for (i = 0; i < rank; i++) - { + for (i = 0; i < rank; i++) { if (buf[i]) - HDfree(buf[i]); + HDfree(buf[i]); } /* close */ @@ -1741,21 +1707,18 @@ ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) goto out; if (H5Aclose(aid) < 0) goto out; - if (buf) - { + if (buf) { HDfree(buf); buf = NULL; } - return (ssize_t) nbytes; + return (ssize_t)nbytes; /* error zone */ out: - if (buf) - { + if (buf) { /* free all the ptr's from the H5Aread() */ - for (i = 0; i < rank; i++) - { + for (i = 0; i < rank; i++) { if (buf[i]) HDfree(buf[i]); } @@ -1766,37 +1729,37 @@ out: H5Sclose(sid); H5Aclose(aid); H5Tclose(tid); - }H5E_END_TRY; + } + H5E_END_TRY; return FAIL; } /*------------------------------------------------------------------------- -* Function: H5DSget_scale_name -* -* Purpose: Read the name of dataset scale DID into buffer NAME -* Up to 'size' characters are stored in 'name' followed by a '\0' string -* terminator. If the name is longer than 'size'-1, -* the string terminator is stored in the last position of the buffer to -* properly terminate the string. -* -* Return: size of name if found, zero if not found, Failure: FAIL -* -* Programmer: pvn@ncsa.uiuc.edu -* -* Date: January 04, 2005 -* -* Comments: -* -* Modifications: -* The size of the name returned should not include the NULL termination -* in its value so as to be consistent with other HDF5 APIs. -* -*------------------------------------------------------------------------- -*/ - -ssize_t H5DSget_scale_name(hid_t did, - char *name, - size_t size) + * Function: H5DSget_scale_name + * + * Purpose: Read the name of dataset scale DID into buffer NAME + * Up to 'size' characters are stored in 'name' followed by a '\0' string + * terminator. If the name is longer than 'size'-1, + * the string terminator is stored in the last position of the buffer to + * properly terminate the string. + * + * Return: size of name if found, zero if not found, Failure: FAIL + * + * Programmer: pvn@ncsa.uiuc.edu + * + * Date: January 04, 2005 + * + * Comments: + * + * Modifications: + * The size of the name returned should not include the NULL termination + * in its value so as to be consistent with other HDF5 APIs. + * + *------------------------------------------------------------------------- + */ + +ssize_t +H5DSget_scale_name(hid_t did, char *name, size_t size) { hid_t aid; /* attribute ID */ hid_t tid = -1; /* attribute type ID */ @@ -1805,26 +1768,26 @@ ssize_t H5DSget_scale_name(hid_t did, size_t nbytes; size_t copy_len; int has_name; - char *buf=NULL; + char * buf = NULL; /*------------------------------------------------------------------------- - * parameter checking - *------------------------------------------------------------------------- - */ + * parameter checking + *------------------------------------------------------------------------- + */ /* get ID type */ if ((it = H5Iget_type(did)) < 0) return FAIL; - if (H5I_DATASET!=it) + if (H5I_DATASET != it) return FAIL; - if ((H5DSis_scale(did))<=0) + if ((H5DSis_scale(did)) <= 0) return FAIL; /*------------------------------------------------------------------------- - * check if the DS has a name - *------------------------------------------------------------------------- - */ + * check if the DS has a name + *------------------------------------------------------------------------- + */ /* try to find the attribute "NAME" on the >>DS<< dataset */ if ((has_name = H5LT_find_attribute(did, "NAME")) < 0) @@ -1834,43 +1797,43 @@ ssize_t H5DSget_scale_name(hid_t did, return 0; /*------------------------------------------------------------------------- - * open the attribute - *------------------------------------------------------------------------- - */ + * open the attribute + *------------------------------------------------------------------------- + */ - if((aid = H5Aopen(did, "NAME", H5P_DEFAULT)) < 0) + if ((aid = H5Aopen(did, "NAME", H5P_DEFAULT)) < 0) return FAIL; /* get space */ - if((sid = H5Aget_space(aid)) < 0) + if ((sid = H5Aget_space(aid)) < 0) goto out; /* get type */ - if((tid = H5Aget_type(aid)) < 0) + if ((tid = H5Aget_type(aid)) < 0) goto out; /* get the size */ - if((nbytes = H5Tget_size(tid)) == 0) + if ((nbytes = H5Tget_size(tid)) == 0) goto out; /* allocate a temporary buffer */ - buf = (char*)HDmalloc(nbytes * sizeof(char)); + buf = (char *)HDmalloc(nbytes * sizeof(char)); if (buf == NULL) goto out; /* read */ - if (H5Aread(aid,tid,buf) < 0) + if (H5Aread(aid, tid, buf) < 0) goto out; /* compute the string length which will fit into the user's buffer */ - copy_len = MIN(size-1, nbytes); + copy_len = MIN(size - 1, nbytes); /* copy all/some of the name */ if (name) { - memcpy(name, buf, copy_len); + HDmemcpy(name, buf, copy_len); /* terminate the string */ - name[copy_len]='\0'; + name[copy_len] = '\0'; } /* close */ @@ -1883,225 +1846,226 @@ ssize_t H5DSget_scale_name(hid_t did, if (buf) HDfree(buf); - return (ssize_t) MAX(0,nbytes-1); + return (ssize_t)(nbytes - 1); /* error zone */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Aclose(aid); H5Tclose(tid); H5Sclose(sid); - } H5E_END_TRY; + } + H5E_END_TRY; if (buf) HDfree(buf); return FAIL; } /*------------------------------------------------------------------------- -* Function: H5DSis_scale -* -* Purpose: check if the dataset DID is a dimension scale -* -* Return: 1, is, 0, not, FAIL, error -* -* Programmer: pvn@ncsa.uiuc.edu -* -* Date: January 04, 2005 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -htri_t H5DSis_scale(hid_t did) + * Function: H5DSis_scale + * + * Purpose: check if the dataset DID is a dimension scale + * + * Return: 1, is, 0, not, FAIL, error + * + * Programmer: pvn@ncsa.uiuc.edu + * + * Date: January 04, 2005 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +htri_t +H5DSis_scale(hid_t did) { - hid_t tid = -1; /* attribute type ID */ - hid_t aid = -1; /* attribute ID */ - herr_t has_class; /* has the "CLASS" attribute */ - htri_t is_ds; /* boolean return value */ + hid_t tid = -1; /* attribute type ID */ + hid_t aid = -1; /* attribute ID */ + herr_t has_class; /* has the "CLASS" attribute */ + htri_t is_ds; /* boolean return value */ H5I_type_t it; /* ID type */ - char *buf; /* Name of attribute */ + char * buf; /* Name of attribute */ hsize_t storage_size; /* Size of storage for attribute */ /*------------------------------------------------------------------------- - * parameter checking - *------------------------------------------------------------------------- - */ + * parameter checking + *------------------------------------------------------------------------- + */ /* get ID type */ if ((it = H5Iget_type(did)) < 0) return FAIL; - if(H5I_DATASET != it) + if (H5I_DATASET != it) return FAIL; /* try to find the attribute "CLASS" on the dataset */ - if((has_class = H5LT_find_attribute(did, "CLASS")) < 0) + if ((has_class = H5LT_find_attribute(did, "CLASS")) < 0) return FAIL; - if(has_class == 0) + if (has_class == 0) is_ds = 0; - else - { - if((aid = H5Aopen(did, "CLASS", H5P_DEFAULT)) < 0) + else { + if ((aid = H5Aopen(did, "CLASS", H5P_DEFAULT)) < 0) goto out; - if((tid = H5Aget_type(aid)) < 0) + if ((tid = H5Aget_type(aid)) < 0) goto out; - /* check to make sure attribute is a string */ - if(H5T_STRING != H5Tget_class(tid)) - goto out; + /* check to make sure attribute is a string */ + if (H5T_STRING != H5Tget_class(tid)) + goto out; - /* check to make sure string is null-terminated */ - if(H5T_STR_NULLTERM != H5Tget_strpad(tid)) - goto out; + /* check to make sure string is null-terminated */ + if (H5T_STR_NULLTERM != H5Tget_strpad(tid)) + goto out; - /* allocate buffer large enough to hold string */ - if((storage_size = H5Aget_storage_size(aid)) == 0) - goto out; + /* allocate buffer large enough to hold string */ + if ((storage_size = H5Aget_storage_size(aid)) == 0) + goto out; - buf = (char*)HDmalloc( (size_t)storage_size * sizeof(char) + 1); - if(buf == NULL) - goto out; + buf = (char *)HDmalloc((size_t)storage_size * sizeof(char) + 1); + if (buf == NULL) + goto out; - /* Read the attribute */ - if(H5Aread(aid, tid, buf) < 0) - goto out; + /* Read the attribute */ + if (H5Aread(aid, tid, buf) < 0) + goto out; - /* compare strings */ - if(HDstrncmp(buf, DIMENSION_SCALE_CLASS, MIN(HDstrlen(DIMENSION_SCALE_CLASS),HDstrlen(buf)))==0) + /* compare strings */ + if (HDstrncmp(buf, DIMENSION_SCALE_CLASS, MIN(HDstrlen(DIMENSION_SCALE_CLASS), HDstrlen(buf))) == 0) is_ds = 1; else is_ds = 0; - HDfree(buf); + HDfree(buf); - if(H5Tclose(tid) < 0) + if (H5Tclose(tid) < 0) goto out; if (H5Aclose(aid) < 0) goto out; - - } return is_ds; /* error zone */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Aclose(aid); H5Tclose(tid); - } H5E_END_TRY; + } + H5E_END_TRY; return FAIL; - } /*------------------------------------------------------------------------- -* Function: H5DSget_num_scales -* -* Purpose: get the number of scales linked to the IDX dimension of dataset DID -* -* Return: -* Success: number of scales -* Failure: FAIL -* -* Programmer: pvn@ncsa.uiuc.edu -* -* Date: January 13, 2005 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -int H5DSget_num_scales(hid_t did, - unsigned int idx) + * Function: H5DSget_num_scales + * + * Purpose: get the number of scales linked to the IDX dimension of dataset DID + * + * Return: + * Success: number of scales + * Failure: FAIL + * + * Programmer: pvn@ncsa.uiuc.edu + * + * Date: January 13, 2005 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +int +H5DSget_num_scales(hid_t did, unsigned int idx) { int has_dimlist; - hid_t sid; /* space ID */ - hid_t tid = -1; /* attribute type ID */ - hid_t aid = -1; /* attribute ID */ - int rank; /* rank of dataset */ - hvl_t *buf = NULL; /* VL buffer to store in the attribute */ - H5I_type_t it; /* ID type */ + hid_t sid; /* space ID */ + hid_t tid = -1; /* attribute type ID */ + hid_t aid = -1; /* attribute ID */ + int rank; /* rank of dataset */ + hvl_t * buf = NULL; /* VL buffer to store in the attribute */ + H5I_type_t it; /* ID type */ int nscales; /*------------------------------------------------------------------------- - * parameter checking - *------------------------------------------------------------------------- - */ + * parameter checking + *------------------------------------------------------------------------- + */ /* get ID type */ - if((it = H5Iget_type(did)) < 0) + if ((it = H5Iget_type(did)) < 0) return FAIL; - if(H5I_DATASET != it) + if (H5I_DATASET != it) return FAIL; /*------------------------------------------------------------------------- - * the attribute "DIMENSION_LIST" on the >>data<< dataset must exist - *------------------------------------------------------------------------- - */ + * the attribute "DIMENSION_LIST" on the >>data<< dataset must exist + *------------------------------------------------------------------------- + */ /* get dataset space */ - if((sid = H5Dget_space(did)) < 0) + if ((sid = H5Dget_space(did)) < 0) return FAIL; /* get rank */ - if((rank = H5Sget_simple_extent_ndims(sid)) < 0) + if ((rank = H5Sget_simple_extent_ndims(sid)) < 0) goto out; /* close dataset space */ - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; /* dimemsion index IDX range checking */ - if(idx >= (unsigned int )rank) + if (idx >= (unsigned int)rank) return FAIL; /* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ - if((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0) + if ((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0) return FAIL; /* it does not exist */ - if(has_dimlist == 0) + if (has_dimlist == 0) return 0; /*------------------------------------------------------------------------- - * the attribute exists, open it - *------------------------------------------------------------------------- - */ + * the attribute exists, open it + *------------------------------------------------------------------------- + */ else { - if((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0) + if ((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0) goto out; - if((tid = H5Aget_type(aid)) < 0) + if ((tid = H5Aget_type(aid)) < 0) goto out; - if((sid = H5Aget_space(aid)) < 0) + if ((sid = H5Aget_space(aid)) < 0) goto out; /* allocate and initialize the VL */ buf = (hvl_t *)HDmalloc((size_t)rank * sizeof(hvl_t)); - if(buf == NULL) + if (buf == NULL) goto out; /* read */ - if(H5Aread(aid, tid, buf) < 0) + if (H5Aread(aid, tid, buf) < 0) goto out; nscales = (int)buf[idx].len; /* close */ - if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) + if (H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) goto out; - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; - if(H5Tclose(tid) < 0) + if (H5Tclose(tid) < 0) goto out; - if(H5Aclose(aid) < 0) + if (H5Aclose(aid) < 0) goto out; HDfree(buf); buf = NULL; @@ -2111,84 +2075,85 @@ int H5DSget_num_scales(hid_t did, /* error zone */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Sclose(sid); H5Aclose(aid); H5Tclose(tid); - } H5E_END_TRY; + } + H5E_END_TRY; - if(buf) + if (buf) HDfree(buf); return FAIL; } /*------------------------------------------------------------------------- -* Function: H5DS_is_reserved -* -* Purpose: Verify that a dataset's CLASS is either an image, palette or table -* -* Return: true, false, fail -* -* Programmer: pvn@ncsa.uiuc.edu -* -* Date: March 19, 2005 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -static -herr_t H5DS_is_reserved(hid_t did) + * Function: H5DS_is_reserved + * + * Purpose: Verify that a dataset's CLASS is either an image, palette or table + * + * Return: true, false, fail + * + * Programmer: pvn@ncsa.uiuc.edu + * + * Date: March 19, 2005 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +static herr_t +H5DS_is_reserved(hid_t did) { - int has_class; - hid_t tid = -1; - hid_t aid = -1; - char *buf; /* Name of attribute */ + int has_class; + hid_t tid = -1; + hid_t aid = -1; + char * buf; /* Name of attribute */ hsize_t storage_size; /* Size of storage for attribute */ - herr_t ret; + herr_t ret; /* try to find the attribute "CLASS" on the dataset */ - if((has_class = H5LT_find_attribute(did, "CLASS")) < 0) + if ((has_class = H5LT_find_attribute(did, "CLASS")) < 0) return -1; - if(has_class == 0) + if (has_class == 0) return 0; - assert(has_class == 1); - if((aid = H5Aopen(did, "CLASS", H5P_DEFAULT)) < 0) + assert(has_class == 1); + if ((aid = H5Aopen(did, "CLASS", H5P_DEFAULT)) < 0) goto out; - if((tid = H5Aget_type(aid)) < 0) + if ((tid = H5Aget_type(aid)) < 0) goto out; /* check to make sure attribute is a string */ - if(H5T_STRING != H5Tget_class(tid)) - goto out; + if (H5T_STRING != H5Tget_class(tid)) + goto out; /* check to make sure string is null-terminated */ - if(H5T_STR_NULLTERM != H5Tget_strpad(tid)) - goto out; + if (H5T_STR_NULLTERM != H5Tget_strpad(tid)) + goto out; /* allocate buffer large enough to hold string */ - if((storage_size = H5Aget_storage_size(aid)) == 0) - goto out; + if ((storage_size = H5Aget_storage_size(aid)) == 0) + goto out; - buf = (char*)HDmalloc( (size_t)storage_size * sizeof(char) + 1); - if(buf == NULL) - goto out; + buf = (char *)HDmalloc((size_t)storage_size * sizeof(char) + 1); + if (buf == NULL) + goto out; /* Read the attribute */ - if(H5Aread(aid, tid, buf) < 0) - goto out; - + if (H5Aread(aid, tid, buf) < 0) + goto out; - if(HDstrncmp(buf, IMAGE_CLASS, MIN(HDstrlen(IMAGE_CLASS),HDstrlen(buf))) == 0 || - HDstrncmp(buf, PALETTE_CLASS, MIN(HDstrlen(PALETTE_CLASS),HDstrlen(buf))) == 0 || - HDstrncmp(buf, TABLE_CLASS, MIN(HDstrlen(TABLE_CLASS),HDstrlen(buf))) == 0 ) + if (HDstrncmp(buf, IMAGE_CLASS, MIN(HDstrlen(IMAGE_CLASS), HDstrlen(buf))) == 0 || + HDstrncmp(buf, PALETTE_CLASS, MIN(HDstrlen(PALETTE_CLASS), HDstrlen(buf))) == 0 || + HDstrncmp(buf, TABLE_CLASS, MIN(HDstrlen(TABLE_CLASS), HDstrlen(buf))) == 0) ret = 1; else ret = 0; @@ -2201,7 +2166,6 @@ herr_t H5DS_is_reserved(hid_t did) if (H5Aclose(aid) < 0) goto out; - return ret; /* error zone */ @@ -2210,52 +2174,51 @@ out: { H5Tclose(tid); H5Aclose(aid); - } H5E_END_TRY; + } + H5E_END_TRY; return FAIL; } /*------------------------------------------------------------------------- -* Function: H5DS_get_REFLIST_type -* -* Purpose: This is a helper function to return a native type for -* the REFERENCE_LIST attribute. -* -* Return: Type identifier on success and negative on failure -* -* Programmer: epourmal@hdfgroup.org -* -* Date: May 22, 2010 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -static -hid_t H5DS_get_REFLIST_type(void) + * Function: H5DS_get_REFLIST_type + * + * Purpose: This is a helper function to return a native type for + * the REFERENCE_LIST attribute. + * + * Return: Type identifier on success and negative on failure + * + * Programmer: epourmal@hdfgroup.org + * + * Date: May 22, 2010 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +static hid_t +H5DS_get_REFLIST_type(void) { - hid_t ntid_t = -1; - + hid_t ntid_t = -1; + /* Build native type that corresponds to compound datatype used to store ds_list_t structure in the REFERENCE_LIST attribute */ - if((ntid_t = H5Tcreate(H5T_COMPOUND, sizeof(ds_list_t))) < 0) + if ((ntid_t = H5Tcreate(H5T_COMPOUND, sizeof(ds_list_t))) < 0) goto out; - if(H5Tinsert(ntid_t, "dataset", HOFFSET(ds_list_t,ref), H5T_STD_REF_OBJ) < 0) + if (H5Tinsert(ntid_t, "dataset", HOFFSET(ds_list_t, ref), H5T_STD_REF_OBJ) < 0) goto out; - if(H5Tinsert(ntid_t, "dimension", HOFFSET(ds_list_t, dim_idx), H5T_NATIVE_INT) < 0) + if (H5Tinsert(ntid_t, "dimension", HOFFSET(ds_list_t, dim_idx), H5T_NATIVE_INT) < 0) goto out; return ntid_t; out: - H5E_BEGIN_TRY { - H5Tclose(ntid_t); - } H5E_END_TRY; + H5E_BEGIN_TRY { H5Tclose(ntid_t); } + H5E_END_TRY; return FAIL; -} - +} diff --git a/hl/src/H5DSprivate.h b/hl/src/H5DSprivate.h index 9d20d48..42dd6bf 100644 --- a/hl/src/H5DSprivate.h +++ b/hl/src/H5DSprivate.h @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -20,21 +20,15 @@ /* public LT prototypes */ #include "H5DSpublic.h" - - - /* attribute type of a DS dataset */ typedef struct ds_list_t { - hobj_ref_t ref; /* object reference */ - unsigned int dim_idx; /* dimension index of the dataset */ + hobj_ref_t ref; /* object reference */ + unsigned int dim_idx; /* dimension index of the dataset */ } ds_list_t; - /*------------------------------------------------------------------------- * private functions *------------------------------------------------------------------------- */ - #endif - diff --git a/hl/src/H5DSpublic.h b/hl/src/H5DSpublic.h index 615122c..ca7ad3b 100644 --- a/hl/src/H5DSpublic.h +++ b/hl/src/H5DSpublic.h @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -14,61 +14,37 @@ #ifndef _H5DSpublic_H #define _H5DSpublic_H - - #define DIMENSION_SCALE_CLASS "DIMENSION_SCALE" #define DIMENSION_LIST "DIMENSION_LIST" #define REFERENCE_LIST "REFERENCE_LIST" #define DIMENSION_LABELS "DIMENSION_LABELS" - -typedef herr_t (*H5DS_iterate_t)(hid_t dset, unsigned dim, hid_t scale, void *visitor_data); - +typedef herr_t (*H5DS_iterate_t)(hid_t dset, unsigned dim, hid_t scale, void *visitor_data); #ifdef __cplusplus extern "C" { #endif -H5_HLDLL herr_t H5DSattach_scale( hid_t did, - hid_t dsid, - unsigned int idx); - -H5_HLDLL herr_t H5DSdetach_scale( hid_t did, - hid_t dsid, - unsigned int idx); - -H5_HLDLL herr_t H5DSset_scale( hid_t dsid, - const char *dimname); +H5_HLDLL herr_t H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx); -H5_HLDLL int H5DSget_num_scales( hid_t did, - unsigned int dim); +H5_HLDLL herr_t H5DSdetach_scale(hid_t did, hid_t dsid, unsigned int idx); -H5_HLDLL herr_t H5DSset_label( hid_t did, - unsigned int idx, - const char *label); +H5_HLDLL herr_t H5DSset_scale(hid_t dsid, const char *dimname); -H5_HLDLL ssize_t H5DSget_label( hid_t did, - unsigned int idx, - char *label, - size_t size); +H5_HLDLL int H5DSget_num_scales(hid_t did, unsigned int dim); -H5_HLDLL ssize_t H5DSget_scale_name( hid_t did, - char *name, - size_t size); +H5_HLDLL herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label); -H5_HLDLL htri_t H5DSis_scale( hid_t did); +H5_HLDLL ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size); -H5_HLDLL herr_t H5DSiterate_scales( hid_t did, - unsigned int dim, - int *idx, - H5DS_iterate_t visitor, - void *visitor_data); +H5_HLDLL ssize_t H5DSget_scale_name(hid_t did, char *name, size_t size); -H5_HLDLL htri_t H5DSis_attached( hid_t did, - hid_t dsid, - unsigned int idx); +H5_HLDLL htri_t H5DSis_scale(hid_t did); +H5_HLDLL herr_t H5DSiterate_scales(hid_t did, unsigned int dim, int *idx, H5DS_iterate_t visitor, + void *visitor_data); +H5_HLDLL htri_t H5DSis_attached(hid_t did, hid_t dsid, unsigned int idx); #ifdef __cplusplus } diff --git a/hl/src/H5HLprivate2.h b/hl/src/H5HLprivate2.h index 45591e8..1202f00 100644 --- a/hl/src/H5HLprivate2.h +++ b/hl/src/H5HLprivate2.h @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -24,4 +24,3 @@ #include "H5private.h" #endif /* _H5HLprivate2_H */ - diff --git a/hl/src/H5IM.c b/hl/src/H5IM.c index f76f029..21fba50 100644 --- a/hl/src/H5IM.c +++ b/hl/src/H5IM.c @@ -1,15 +1,15 @@ /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * -* Copyright by The HDF Group. * -* Copyright by the Board of Trustees of the University of Illinois. * -* All rights reserved. * -* * -* This file is part of HDF5. The full HDF5 copyright notice, including * -* terms governing use, modification, and redistribution, is contained in * + * Copyright by The HDF Group. * + * Copyright by the Board of Trustees of the University of Illinois. * + * All rights reserved. * + * * + * This file is part of HDF5. The full HDF5 copyright notice, including * + * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * -* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ + * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ #include "H5IMprivate.h" #include "H5LTprivate.h" @@ -17,34 +17,32 @@ #include <stdlib.h> /*------------------------------------------------------------------------- -* Function: H5IMmake_image_8bit -* -* Purpose: Creates and writes an image an 8 bit image -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu -* -* Date: June 13, 2001 -* -* Comments: -* based on HDF5 Image and Palette Specification -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5IMmake_image_8bit( hid_t loc_id, - const char *dset_name, - hsize_t width, - hsize_t height, - const unsigned char *buf ) + * Function: H5IMmake_image_8bit + * + * Purpose: Creates and writes an image an 8 bit image + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu + * + * Date: June 13, 2001 + * + * Comments: + * based on HDF5 Image and Palette Specification + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5IMmake_image_8bit(hid_t loc_id, const char *dset_name, hsize_t width, hsize_t height, + const unsigned char *buf) { - hsize_t dims[IMAGE8_RANK]; + hsize_t dims[IMAGE8_RANK]; /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) return -1; /* Initialize the image dimensions */ @@ -52,283 +50,267 @@ herr_t H5IMmake_image_8bit( hid_t loc_id, dims[1] = width; /* Make the dataset */ - if ( H5LTmake_dataset( loc_id, dset_name, IMAGE8_RANK, dims, H5T_NATIVE_UCHAR, buf ) < 0) + if (H5LTmake_dataset(loc_id, dset_name, IMAGE8_RANK, dims, H5T_NATIVE_UCHAR, buf) < 0) return -1; /* Attach the CLASS attribute */ - if ( H5LTset_attribute_string( loc_id, dset_name, "CLASS", IMAGE_CLASS ) < 0) + if (H5LTset_attribute_string(loc_id, dset_name, "CLASS", IMAGE_CLASS) < 0) return -1; /* Attach the VERSION attribute */ - if ( H5LTset_attribute_string( loc_id, dset_name, "IMAGE_VERSION", IMAGE_VERSION ) < 0) + if (H5LTset_attribute_string(loc_id, dset_name, "IMAGE_VERSION", IMAGE_VERSION) < 0) return -1; /* Attach the IMAGE_SUBCLASS attribute */ - if ( H5LTset_attribute_string( loc_id, dset_name, "IMAGE_SUBCLASS", "IMAGE_INDEXED" ) < 0) + if (H5LTset_attribute_string(loc_id, dset_name, "IMAGE_SUBCLASS", "IMAGE_INDEXED") < 0) return -1; return 0; } /*------------------------------------------------------------------------- -* Function: H5IMmake_image_24bit -* -* Purpose: -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu -* -* Date: June 13, 2001 -* -* Comments: -* based on HDF5 Image and Palette Specification -* -* Interlace Mode Dimensions in the Dataspace -* INTERLACE_PIXEL [height][width][pixel components] -* INTERLACE_PLANE [pixel components][height][width] -* -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5IMmake_image_24bit( hid_t loc_id, - const char *dset_name, - hsize_t width, - hsize_t height, - const char *interlace, - const unsigned char *buf ) + * Function: H5IMmake_image_24bit + * + * Purpose: + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu + * + * Date: June 13, 2001 + * + * Comments: + * based on HDF5 Image and Palette Specification + * + * Interlace Mode Dimensions in the Dataspace + * INTERLACE_PIXEL [height][width][pixel components] + * INTERLACE_PLANE [pixel components][height][width] + * + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5IMmake_image_24bit(hid_t loc_id, const char *dset_name, hsize_t width, hsize_t height, + const char *interlace, const unsigned char *buf) { - hsize_t dims[IMAGE24_RANK]; + hsize_t dims[IMAGE24_RANK]; /* check the arguments */ - if (interlace == NULL) + if (interlace == NULL) return -1; - if (dset_name == NULL) + if (dset_name == NULL) return -1; - /* Initialize the image dimensions */ - if ( HDstrncmp( interlace, "INTERLACE_PIXEL",15 ) == 0 ) - { + if (HDstrncmp(interlace, "INTERLACE_PIXEL", 15) == 0) { /* Number of color planes is defined as the third dimension */ dims[0] = height; dims[1] = width; dims[2] = IMAGE24_RANK; } + else if (HDstrncmp(interlace, "INTERLACE_PLANE", 15) == 0) { + /* Number of color planes is defined as the first dimension */ + dims[0] = IMAGE24_RANK; + dims[1] = height; + dims[2] = width; + } else - if ( HDstrncmp( interlace, "INTERLACE_PLANE",15 ) == 0 ) - { - /* Number of color planes is defined as the first dimension */ - dims[0] = IMAGE24_RANK; - dims[1] = height; - dims[2] = width; - } - else return -1; - - /* Make the dataset */ - if ( H5LTmake_dataset( loc_id, dset_name, IMAGE24_RANK, dims, H5T_NATIVE_UCHAR, buf ) < 0) - return -1; + return -1; - /* Attach the CLASS attribute */ - if ( H5LTset_attribute_string( loc_id, dset_name, "CLASS", IMAGE_CLASS ) < 0) - return -1; + /* Make the dataset */ + if (H5LTmake_dataset(loc_id, dset_name, IMAGE24_RANK, dims, H5T_NATIVE_UCHAR, buf) < 0) + return -1; - /* Attach the VERSION attribute */ - if ( H5LTset_attribute_string( loc_id, dset_name, "IMAGE_VERSION", IMAGE_VERSION ) < 0) - return -1; + /* Attach the CLASS attribute */ + if (H5LTset_attribute_string(loc_id, dset_name, "CLASS", IMAGE_CLASS) < 0) + return -1; - /* Attach the IMAGE_SUBCLASS attribute */ - if ( H5LTset_attribute_string( loc_id, dset_name, "IMAGE_SUBCLASS", "IMAGE_TRUECOLOR" ) < 0) - return -1; + /* Attach the VERSION attribute */ + if (H5LTset_attribute_string(loc_id, dset_name, "IMAGE_VERSION", IMAGE_VERSION) < 0) + return -1; - /* Attach the INTERLACE_MODE attribute. This attributes is only for true color images */ - if ( H5LTset_attribute_string( loc_id, dset_name, "INTERLACE_MODE", interlace ) < 0) - return -1; + /* Attach the IMAGE_SUBCLASS attribute */ + if (H5LTset_attribute_string(loc_id, dset_name, "IMAGE_SUBCLASS", "IMAGE_TRUECOLOR") < 0) + return -1; - return 0; + /* Attach the INTERLACE_MODE attribute. This attributes is only for true color images */ + if (H5LTset_attribute_string(loc_id, dset_name, "INTERLACE_MODE", interlace) < 0) + return -1; + return 0; } - - /*------------------------------------------------------------------------- -* Function: find_palette -* -* Purpose: operator function used by H5LT_find_palette -* -* Return: -* -* Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu -* -* Date: May 28, 2001 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -static herr_t find_palette(hid_t loc_id, - const char *name, - const H5A_info_t *ainfo, - void *op_data) + * Function: find_palette + * + * Purpose: operator function used by H5LT_find_palette + * + * Return: + * + * Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu + * + * Date: May 28, 2001 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +static herr_t +find_palette(hid_t loc_id, const char *name, const H5A_info_t *ainfo, void *op_data) { int ret = H5_ITER_CONT; /* check the arguments */ - if (name == NULL) + if (name == NULL) return -1; /* Shut compiler up */ - loc_id = loc_id; ainfo = ainfo; op_data = op_data; + loc_id = loc_id; + ainfo = ainfo; + op_data = op_data; /* Define a positive value for return value if the attribute was found. This will - * cause the iterator to immediately return that positive value, - * indicating short-circuit success - */ - if(HDstrncmp(name, "PALETTE",7) == 0) + * cause the iterator to immediately return that positive value, + * indicating short-circuit success + */ + if (HDstrncmp(name, "PALETTE", 7) == 0) ret = H5_ITER_STOP; return ret; } - /*------------------------------------------------------------------------- -* Function: H5IM_find_palette -* -* Purpose: Private function. Find the attribute "PALETTE" in the image dataset -* -* Return: Success: 1, Failure: 0 -* -* Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu -* -* Date: May 11, 2001 -* -* Comments: -* The function uses H5Aiterate2 with the operator function find_palette -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5IM_find_palette( hid_t loc_id ) + * Function: H5IM_find_palette + * + * Purpose: Private function. Find the attribute "PALETTE" in the image dataset + * + * Return: Success: 1, Failure: 0 + * + * Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu + * + * Date: May 11, 2001 + * + * Comments: + * The function uses H5Aiterate2 with the operator function find_palette + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5IM_find_palette(hid_t loc_id) { return H5Aiterate2(loc_id, H5_INDEX_NAME, H5_ITER_INC, NULL, find_palette, NULL); } - /*------------------------------------------------------------------------- -* Function: H5IMget_image_info -* -* Purpose: Gets information about an image dataset (dimensions, interlace mode -* and number of associated palettes). -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu -* -* Date: July 25, 2001 -* -* Comments: -* based on HDF5 Image and Palette Specification -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5IMget_image_info( hid_t loc_id, - const char *dset_name, - hsize_t *width, - hsize_t *height, - hsize_t *planes, - char *interlace, - hssize_t *npals ) + * Function: H5IMget_image_info + * + * Purpose: Gets information about an image dataset (dimensions, interlace mode + * and number of associated palettes). + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu + * + * Date: July 25, 2001 + * + * Comments: + * based on HDF5 Image and Palette Specification + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5IMget_image_info(hid_t loc_id, const char *dset_name, hsize_t *width, hsize_t *height, hsize_t *planes, + char *interlace, hssize_t *npals) { - hid_t did; - hid_t sid; + hid_t did = -1; + hid_t sid = -1; hsize_t dims[IMAGE24_RANK]; - hid_t aid; - hid_t asid; - hid_t atid; + hid_t aid = -1; + hid_t asid = -1; + hid_t atid = -1; H5T_class_t aclass; int has_pal; int has_attr; /* check the arguments */ - if (dset_name == NULL) - return -1; - if (interlace == NULL) - return -1; + if (dset_name == NULL) + return -1; + if (interlace == NULL) + return -1; /*assume initially we have no palettes attached*/ *npals = 0; /* Open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) return -1; /* Try to find the attribute "INTERLACE_MODE" on the >>image<< dataset */ - has_attr = H5LT_find_attribute(did, "INTERLACE_MODE"); + if ((has_attr = H5LT_find_attribute(did, "INTERLACE_MODE")) < 0) + goto out; /* It exists, get it */ - if(has_attr == 1) - { + if (has_attr == 1) { - if((aid = H5Aopen(did, "INTERLACE_MODE", H5P_DEFAULT)) < 0) + if ((aid = H5Aopen(did, "INTERLACE_MODE", H5P_DEFAULT)) < 0) goto out; - if((atid = H5Aget_type(aid)) < 0) + if ((atid = H5Aget_type(aid)) < 0) goto out; - if(H5Aread(aid, atid, interlace) < 0) + if (H5Aread(aid, atid, interlace) < 0) goto out; - if(H5Tclose(atid) < 0) + if (H5Tclose(atid) < 0) goto out; - if(H5Aclose(aid) < 0) + if (H5Aclose(aid) < 0) goto out; } /* Get the dataspace handle */ - if ( (sid = H5Dget_space( did )) < 0) + if ((sid = H5Dget_space(did)) < 0) goto out; /* Get dimensions */ - if ( H5Sget_simple_extent_dims( sid, dims, NULL) < 0) + if (H5Sget_simple_extent_dims(sid, dims, NULL) < 0) goto out; /* Initialize the image dimensions */ - if ( has_attr == 1 ) - /* This is a 24 bit image */ + if (has_attr == 1) + /* This is a 24 bit image */ { - if ( HDstrncmp( interlace, "INTERLACE_PIXEL", 15 ) == 0 ) - { + if (HDstrncmp(interlace, "INTERLACE_PIXEL", 15) == 0) { /* Number of color planes is defined as the third dimension */ *height = dims[0]; *width = dims[1]; *planes = dims[2]; } + else if (HDstrncmp(interlace, "INTERLACE_PLANE", 15) == 0) { + /* Number of color planes is defined as the first dimension */ + *planes = dims[0]; + *height = dims[1]; + *width = dims[2]; + } else - if ( HDstrncmp( interlace, "INTERLACE_PLANE", 15 ) == 0 ) - { - /* Number of color planes is defined as the first dimension */ - *planes = dims[0]; - *height = dims[1]; - *width = dims[2]; - } - else return -1; + return -1; } else - /* This is a 8 bit image */ + /* This is a 8 bit image */ { *height = dims[0]; *width = dims[1]; @@ -336,375 +318,357 @@ herr_t H5IMget_image_info( hid_t loc_id, } /* Close */ - if ( H5Sclose( sid ) < 0) + if (H5Sclose(sid) < 0) goto out; - /* Get number of palettes */ - /* Try to find the attribute "PALETTE" on the >>image<< dataset */ has_pal = H5IM_find_palette(did); - if(has_pal == 1) - { + if (has_pal == 1) { - if((aid = H5Aopen(did, "PALETTE", H5P_DEFAULT)) < 0) + if ((aid = H5Aopen(did, "PALETTE", H5P_DEFAULT)) < 0) goto out; - if((atid = H5Aget_type(aid)) < 0) + if ((atid = H5Aget_type(aid)) < 0) goto out; - if((aclass = H5Tget_class(atid)) < 0) + if ((aclass = H5Tget_class(atid)) < 0) goto out; /* Check if it is really a reference */ - if(aclass == H5T_REFERENCE) - { + if (aclass == H5T_REFERENCE) { /* Get the reference(s) */ - if ( (asid = H5Aget_space( aid )) < 0) + if ((asid = H5Aget_space(aid)) < 0) goto out; - *npals = H5Sget_simple_extent_npoints( asid ); + *npals = H5Sget_simple_extent_npoints(asid); - if ( H5Sclose( asid ) < 0) + if (H5Sclose(asid) < 0) goto out; } /* H5T_REFERENCE */ - if ( H5Tclose( atid ) < 0) + if (H5Tclose(atid) < 0) goto out; /* Close the attribute. */ - if ( H5Aclose( aid ) < 0) + if (H5Aclose(aid) < 0) goto out; - } /* End access to the dataset and release resources used by it. */ - if ( H5Dclose( did ) < 0) + if (H5Dclose(did) < 0) goto out; return 0; out: - H5Dclose( did ); - H5Aclose( aid ); - H5Sclose( asid ); - H5Tclose( atid ); + if (did > 0) + H5Dclose(did); + if (aid > 0) + H5Aclose(aid); + if (asid > 0) + H5Sclose(asid); + if (atid > 0) + H5Tclose(atid); return -1; - } - /*------------------------------------------------------------------------- -* Function: H5IMread_image -* -* Purpose: Reads image data from disk. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu -* -* Date: June 13, 2001 -* -* Comments: -* based on HDF5 Image and Palette Specification -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5IMread_image( hid_t loc_id, - const char *dset_name, - unsigned char *buf ) + * Function: H5IMread_image + * + * Purpose: Reads image data from disk. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu + * + * Date: June 13, 2001 + * + * Comments: + * based on HDF5 Image and Palette Specification + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5IMread_image(hid_t loc_id, const char *dset_name, unsigned char *buf) { - hid_t did; + hid_t did; /* check the arguments */ - if (dset_name == NULL) - return -1; + if (dset_name == NULL) + return -1; /* Open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) return -1; /* Read */ - if ( H5Dread( did, H5T_NATIVE_UCHAR, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf ) < 0) + if (H5Dread(did, H5T_NATIVE_UCHAR, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) goto out; /* End access to the dataset and release resources used by it. */ - if ( H5Dclose( did ) ) + if (H5Dclose(did)) return -1; return 0; out: - H5Dclose( did ); + H5Dclose(did); return -1; - } - /*------------------------------------------------------------------------- -* Function: H5IMmake_palette -* -* Purpose: Creates and writes a palette. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu -* -* Date: May 01, 2001 -* -* Comments: -* based on HDF5 Image and Palette Specification -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5IMmake_palette( hid_t loc_id, - const char *pal_name, - const hsize_t *pal_dims, - const unsigned char *pal_data ) + * Function: H5IMmake_palette + * + * Purpose: Creates and writes a palette. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu + * + * Date: May 01, 2001 + * + * Comments: + * based on HDF5 Image and Palette Specification + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5IMmake_palette(hid_t loc_id, const char *pal_name, const hsize_t *pal_dims, const unsigned char *pal_data) { int has_pal; /* check the arguments */ - if (pal_name == NULL) - return -1; + if (pal_name == NULL) + return -1; /* Check if the dataset already exists */ - has_pal = H5LTfind_dataset( loc_id, pal_name ); + has_pal = H5LTfind_dataset(loc_id, pal_name); /* It exists. Return */ - if ( has_pal == 1 ) + if (has_pal == 1) return 0; /* Make the palette dataset. */ - if ( H5LTmake_dataset( loc_id, pal_name, 2, pal_dims, H5T_NATIVE_UCHAR, pal_data ) < 0 ) + if (H5LTmake_dataset(loc_id, pal_name, 2, pal_dims, H5T_NATIVE_UCHAR, pal_data) < 0) return -1; /* Attach the attribute "CLASS" to the >>palette<< dataset*/ - if ( H5LTset_attribute_string( loc_id, pal_name, "CLASS", PALETTE_CLASS ) < 0) + if (H5LTset_attribute_string(loc_id, pal_name, "CLASS", PALETTE_CLASS) < 0) return -1; /* Attach the attribute "PAL_VERSION" to the >>palette<< dataset*/ - if ( H5LTset_attribute_string( loc_id, pal_name, "PAL_VERSION", "1.2" ) < 0) + if (H5LTset_attribute_string(loc_id, pal_name, "PAL_VERSION", "1.2") < 0) return -1; return 0; - } - /*------------------------------------------------------------------------- -* Function: H5IMlink_palette -* -* Purpose: This function attaches a palette to an existing image dataset -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu -* -* Date: May 01, 2001 -* -* Comments: -* based on HDF5 Image and Palette Specification -* -* An image (dataset) within an HDF5 file may optionally specify an array of -* palettes to be viewed with. The dataset will have an attribute -* which contains an array of object reference pointers which refer to palettes in the file. -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5IMlink_palette( hid_t loc_id, - const char *image_name, - const char *pal_name ) + * Function: H5IMlink_palette + * + * Purpose: This function attaches a palette to an existing image dataset + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu + * + * Date: May 01, 2001 + * + * Comments: + * based on HDF5 Image and Palette Specification + * + * An image (dataset) within an HDF5 file may optionally specify an array of + * palettes to be viewed with. The dataset will have an attribute + * which contains an array of object reference pointers which refer to palettes in the file. + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5IMlink_palette(hid_t loc_id, const char *image_name, const char *pal_name) { hid_t did; - hid_t atid=-1; - hid_t aid=-1; - hid_t asid=-1; - hobj_ref_t ref; /* write a new reference */ - hobj_ref_t *refbuf; /* buffer to read references */ + hid_t atid = -1; + hid_t aid = -1; + hid_t asid = -1; + hobj_ref_t ref; /* write a new reference */ + hobj_ref_t *refbuf; /* buffer to read references */ hssize_t n_refs; hsize_t dim_ref; int ok_pal; - /* check the arguments */ - if (image_name == NULL) - return -1; - if (pal_name == NULL) - return -1; + if (image_name == NULL) + return -1; + if (pal_name == NULL) + return -1; /* The image dataset may or may not have the attribute "PALETTE" - * First we try to open to see if it is already there; if not, it is created. - * If it exists, the array of references is extended to hold the reference - * to the new palette - */ + * First we try to open to see if it is already there; if not, it is created. + * If it exists, the array of references is extended to hold the reference + * to the new palette + */ /* First we get the image id */ - if((did = H5Dopen2(loc_id, image_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, image_name, H5P_DEFAULT)) < 0) return -1; /* Try to find the attribute "PALETTE" on the >>image<< dataset */ - ok_pal = H5LT_find_attribute( did, "PALETTE" ); + ok_pal = H5LT_find_attribute(did, "PALETTE"); /*------------------------------------------------------------------------- - * It does not exist. We create the attribute and one reference - *------------------------------------------------------------------------- - */ - if(ok_pal == 0 ) - { - if((asid = H5Screate(H5S_SCALAR)) < 0) + * It does not exist. We create the attribute and one reference + *------------------------------------------------------------------------- + */ + if (ok_pal == 0) { + if ((asid = H5Screate(H5S_SCALAR)) < 0) goto out; /* Create the attribute type for the reference */ - if((atid = H5Tcopy(H5T_STD_REF_OBJ)) < 0) + if ((atid = H5Tcopy(H5T_STD_REF_OBJ)) < 0) goto out; /* Create the attribute "PALETTE" to be attached to the image*/ - if((aid = H5Acreate2(did, "PALETTE", atid, asid, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((aid = H5Acreate2(did, "PALETTE", atid, asid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; /* Create a reference. The reference is created on the local id. */ - if(H5Rcreate(&ref, loc_id, pal_name, H5R_OBJECT, (hid_t)-1) < 0) + if (H5Rcreate(&ref, loc_id, pal_name, H5R_OBJECT, (hid_t)-1) < 0) goto out; /* Write the attribute with the reference */ - if(H5Awrite(aid, atid, &ref) < 0) + if (H5Awrite(aid, atid, &ref) < 0) goto out; /* close */ - if(H5Sclose(asid) < 0) + if (H5Sclose(asid) < 0) goto out; - if(H5Tclose(atid) < 0) + if (H5Tclose(atid) < 0) goto out; - if(H5Aclose(aid) < 0) + if (H5Aclose(aid) < 0) goto out; - } /*------------------------------------------------------------------------- - * The attribute already exists, open it - *------------------------------------------------------------------------- - */ - else if(ok_pal == 1) - { - if((aid = H5Aopen(did, "PALETTE", H5P_DEFAULT)) < 0) + * The attribute already exists, open it + *------------------------------------------------------------------------- + */ + else if (ok_pal == 1) { + if ((aid = H5Aopen(did, "PALETTE", H5P_DEFAULT)) < 0) goto out; - if((atid = H5Aget_type(aid)) < 0) + if ((atid = H5Aget_type(aid)) < 0) goto out; - if(H5Tget_class(atid) < 0) + if (H5Tget_class(atid) < 0) goto out; /* Get and save the old reference(s) */ - if((asid = H5Aget_space(aid)) < 0) + if ((asid = H5Aget_space(aid)) < 0) goto out; n_refs = H5Sget_simple_extent_npoints(asid); dim_ref = (hsize_t)n_refs + 1; - refbuf = (hobj_ref_t*)HDmalloc( sizeof(hobj_ref_t) * (size_t)dim_ref ); + refbuf = (hobj_ref_t *)HDmalloc(sizeof(hobj_ref_t) * (size_t)dim_ref); - if ( H5Aread( aid, atid, refbuf ) < 0) + if (H5Aread(aid, atid, refbuf) < 0) goto out; /* The attribute must be deleted, in order to the new one can reflect the changes*/ - if(H5Adelete(did, "PALETTE") < 0) + if (H5Adelete(did, "PALETTE") < 0) goto out; /* Create a new reference for this palette. */ - if ( H5Rcreate( &ref, loc_id, pal_name, H5R_OBJECT, (hid_t)-1 ) < 0) + if (H5Rcreate(&ref, loc_id, pal_name, H5R_OBJECT, (hid_t)-1) < 0) goto out; refbuf[n_refs] = ref; /* Create the data space for the new references */ - if(H5Sclose(asid) < 0) + if (H5Sclose(asid) < 0) goto out; - if((asid = H5Screate_simple(1, &dim_ref, NULL)) < 0) + if ((asid = H5Screate_simple(1, &dim_ref, NULL)) < 0) goto out; /* Create the attribute again with the changes of space */ - if(H5Aclose(aid) < 0) + if (H5Aclose(aid) < 0) goto out; - if((aid = H5Acreate2(did, "PALETTE", atid, asid, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((aid = H5Acreate2(did, "PALETTE", atid, asid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; /* Write the attribute with the new references */ - if(H5Awrite(aid, atid, refbuf) < 0) + if (H5Awrite(aid, atid, refbuf) < 0) goto out; /* close */ - if(H5Sclose(asid) < 0) + if (H5Sclose(asid) < 0) goto out; - if(H5Tclose(atid) < 0) + if (H5Tclose(atid) < 0) goto out; - if(H5Aclose(aid) < 0) + if (H5Aclose(aid) < 0) goto out; - HDfree( refbuf ); + HDfree(refbuf); } /* ok_pal == 1 */ /* Close the image dataset. */ - if ( H5Dclose( did ) < 0) + if (H5Dclose(did) < 0) return -1; return 0; out: - H5Dclose( did ); - H5Sclose( asid ); - H5Tclose( atid ); - H5Aclose( aid ); + H5Dclose(did); + H5Sclose(asid); + H5Tclose(atid); + H5Aclose(aid); return -1; } - - /*------------------------------------------------------------------------- -* Function: H5IMunlink_palette -* -* Purpose: This function dettaches a palette from an existing image dataset -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu -* -* Date: September 10, 2001 -* -* Comments: -* based on HDF5 Image and Palette Specification -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5IMunlink_palette( hid_t loc_id, - const char *image_name, - const char *pal_name ) + * Function: H5IMunlink_palette + * + * Purpose: This function dettaches a palette from an existing image dataset + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu + * + * Date: September 10, 2001 + * + * Comments: + * based on HDF5 Image and Palette Specification + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5IMunlink_palette(hid_t loc_id, const char *image_name, const char *pal_name) { hid_t did; hid_t atid; @@ -713,98 +677,94 @@ herr_t H5IMunlink_palette( hid_t loc_id, int ok_pal, has_pal; /* check the arguments */ - if(image_name == NULL) - return -1; - if(pal_name == NULL) - return -1; + if (image_name == NULL) + return -1; + if (pal_name == NULL) + return -1; /* Try to find the palette dataset */ - has_pal = H5LTfind_dataset( loc_id, pal_name ); + has_pal = H5LTfind_dataset(loc_id, pal_name); /* It does not exist. Return */ - if ( has_pal == 0 ) + if (has_pal == 0) return -1; /* The image dataset may or not have the attribute "PALETTE" - * First we try to open to see if it is already there; if not, it is created. - * If it exists, the array of references is extended to hold the reference - * to the new palette - */ + * First we try to open to see if it is already there; if not, it is created. + * If it exists, the array of references is extended to hold the reference + * to the new palette + */ /* First we get the image id */ - if((did = H5Dopen2(loc_id, image_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, image_name, H5P_DEFAULT)) < 0) return -1; /* Try to find the attribute "PALETTE" on the >>image<< dataset */ ok_pal = H5LT_find_attribute(did, "PALETTE"); /* It does not exist. Nothing to do */ - if(ok_pal == 0) + if (ok_pal == 0) return -1; /* The attribute exists, open it */ - else if(ok_pal == 1) - { - if((aid = H5Aopen(did, "PALETTE", H5P_DEFAULT)) < 0) + else if (ok_pal == 1) { + if ((aid = H5Aopen(did, "PALETTE", H5P_DEFAULT)) < 0) goto out; - if((atid = H5Aget_type(aid)) < 0) + if ((atid = H5Aget_type(aid)) < 0) goto out; - if((aclass = H5Tget_class(atid)) < 0) + if ((aclass = H5Tget_class(atid)) < 0) goto out; /* Check if it is really a reference */ - if(aclass == H5T_REFERENCE) - { + if (aclass == H5T_REFERENCE) { /* Delete the attribute */ - if(H5Adelete(did, "PALETTE") < 0) + if (H5Adelete(did, "PALETTE") < 0) goto out; - } /* H5T_REFERENCE */ + } /* H5T_REFERENCE */ - if(H5Tclose(atid) < 0) + if (H5Tclose(atid) < 0) goto out; /* Close the attribute. */ - if(H5Aclose(aid) < 0) + if (H5Aclose(aid) < 0) goto out; } /* ok_pal */ /* Close the image dataset. */ - if(H5Dclose(did) < 0) + if (H5Dclose(did) < 0) return -1; return 0; out: - H5Dclose( did ); + H5Dclose(did); return -1; } - /*------------------------------------------------------------------------- -* Function: H5IMget_npalettes -* -* Purpose: Gets the number of palettes associated to an image -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu -* -* Date: July 22, 2001 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5IMget_npalettes( hid_t loc_id, - const char *image_name, - hssize_t *npals ) + * Function: H5IMget_npalettes + * + * Purpose: Gets the number of palettes associated to an image + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu + * + * Date: July 22, 2001 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5IMget_npalettes(hid_t loc_id, const char *image_name, hssize_t *npals) { hid_t did; hid_t atid; @@ -814,495 +774,469 @@ herr_t H5IMget_npalettes( hid_t loc_id, int has_pal; /* check the arguments */ - if(image_name == NULL) - return -1; + if (image_name == NULL) + return -1; /*assume initially we have no palettes attached*/ *npals = 0; /* Open the dataset. */ - if((did = H5Dopen2(loc_id, image_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, image_name, H5P_DEFAULT)) < 0) return -1; /* Try to find the attribute "PALETTE" on the >>image<< dataset */ has_pal = H5IM_find_palette(did); - if(has_pal == 1 ) - { + if (has_pal == 1) { - if((aid = H5Aopen(did, "PALETTE", H5P_DEFAULT)) < 0) + if ((aid = H5Aopen(did, "PALETTE", H5P_DEFAULT)) < 0) goto out; - if((atid = H5Aget_type(aid)) < 0) + if ((atid = H5Aget_type(aid)) < 0) goto out; - if((aclass = H5Tget_class(atid)) < 0) + if ((aclass = H5Tget_class(atid)) < 0) goto out; /* Check if it is really a reference */ - if(aclass == H5T_REFERENCE) - { - if((asid = H5Aget_space(aid)) < 0) + if (aclass == H5T_REFERENCE) { + if ((asid = H5Aget_space(aid)) < 0) goto out; - *npals = H5Sget_simple_extent_npoints( asid ); + *npals = H5Sget_simple_extent_npoints(asid); - if ( H5Sclose( asid ) < 0) + if (H5Sclose(asid) < 0) goto out; } /* H5T_REFERENCE */ - if ( H5Tclose( atid ) < 0) + if (H5Tclose(atid) < 0) goto out; /* Close the attribute. */ - if ( H5Aclose( aid ) < 0) + if (H5Aclose(aid) < 0) goto out; - } /* Close the image dataset. */ - if ( H5Dclose( did ) < 0) + if (H5Dclose(did) < 0) return -1; return 0; out: - H5Dclose( did ); + H5Dclose(did); return -1; - } - /*------------------------------------------------------------------------- -* Function: H5IMget_palette_info -* -* Purpose: Get palette information -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu -* -* Date: July 22, 2001 -* -* Comments: -* based on HDF5 Image and Palette Specification -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5IMget_palette_info( hid_t loc_id, - const char *image_name, - int pal_number, - hsize_t *pal_dims ) + * Function: H5IMget_palette_info + * + * Purpose: Get palette information + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu + * + * Date: July 22, 2001 + * + * Comments: + * based on HDF5 Image and Palette Specification + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5IMget_palette_info(hid_t loc_id, const char *image_name, int pal_number, hsize_t *pal_dims) { - hid_t did; - int has_pal; - hid_t atid=-1; - hid_t aid; - hid_t asid=-1; - hssize_t n_refs; - hsize_t dim_ref; - hobj_ref_t *refbuf; /* buffer to read references */ - hid_t pal_id; - hid_t pal_space_id; - hsize_t pal_maxdims[2]; + hid_t did; + int has_pal; + hid_t atid = -1; + hid_t aid; + hid_t asid = -1; + hssize_t n_refs; + hsize_t dim_ref; + hobj_ref_t *refbuf; /* buffer to read references */ + hid_t pal_id; + hid_t pal_space_id; + hsize_t pal_maxdims[2]; /* check the arguments */ - if (image_name == NULL) - return -1; + if (image_name == NULL) + return -1; /* Open the dataset. */ - if((did = H5Dopen2(loc_id, image_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, image_name, H5P_DEFAULT)) < 0) return -1; /* Try to find the attribute "PALETTE" on the >>image<< dataset */ has_pal = H5IM_find_palette(did); - if(has_pal == 1) - { - if((aid = H5Aopen(did, "PALETTE", H5P_DEFAULT)) < 0) + if (has_pal == 1) { + if ((aid = H5Aopen(did, "PALETTE", H5P_DEFAULT)) < 0) goto out; - if((atid = H5Aget_type(aid)) < 0) + if ((atid = H5Aget_type(aid)) < 0) goto out; - if(H5Tget_class(atid) < 0) + if (H5Tget_class(atid) < 0) goto out; /* Get the reference(s) */ - if((asid = H5Aget_space(aid)) < 0) + if ((asid = H5Aget_space(aid)) < 0) goto out; n_refs = H5Sget_simple_extent_npoints(asid); dim_ref = (hsize_t)n_refs; - refbuf = (hobj_ref_t*)HDmalloc( sizeof(hobj_ref_t) * (size_t)dim_ref ); + refbuf = (hobj_ref_t *)HDmalloc(sizeof(hobj_ref_t) * (size_t)dim_ref); - if ( H5Aread( aid, atid, refbuf ) < 0) + if (H5Aread(aid, atid, refbuf) < 0) goto out; /* Get the actual palette */ - if ( (pal_id = H5Rdereference( did, H5R_OBJECT, &refbuf[pal_number] )) < 0) + if ((pal_id = H5Rdereference(did, H5R_OBJECT, &refbuf[pal_number])) < 0) goto out; - if ( (pal_space_id = H5Dget_space( pal_id )) < 0) + if ((pal_space_id = H5Dget_space(pal_id)) < 0) goto out; - if ( H5Sget_simple_extent_ndims( pal_space_id ) < 0) + if (H5Sget_simple_extent_ndims(pal_space_id) < 0) goto out; - if ( H5Sget_simple_extent_dims( pal_space_id, pal_dims, pal_maxdims ) < 0) + if (H5Sget_simple_extent_dims(pal_space_id, pal_dims, pal_maxdims) < 0) goto out; /* close */ - if (H5Dclose(pal_id)<0) + if (H5Dclose(pal_id) < 0) goto out; - if ( H5Sclose( pal_space_id ) < 0) + if (H5Sclose(pal_space_id) < 0) goto out; - if ( H5Sclose( asid ) < 0) + if (H5Sclose(asid) < 0) goto out; - if ( H5Tclose( atid ) < 0) + if (H5Tclose(atid) < 0) goto out; - if ( H5Aclose( aid ) < 0) + if (H5Aclose(aid) < 0) goto out; - HDfree( refbuf ); - - + HDfree(refbuf); } /* Close the image dataset. */ - if ( H5Dclose( did ) < 0) + if (H5Dclose(did) < 0) return -1; return 0; out: - H5Dclose( did ); - H5Sclose( asid ); - H5Tclose( atid ); - H5Aclose( aid ); + H5Dclose(did); + H5Sclose(asid); + H5Tclose(atid); + H5Aclose(aid); return -1; - } - /*------------------------------------------------------------------------- -* Function: H5IMget_palette -* -* Purpose: Read palette -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu -* -* Date: August 30, 2001 -* -* Comments: -* based on HDF5 Image and Palette Specification -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5IMget_palette( hid_t loc_id, - const char *image_name, - int pal_number, - unsigned char *pal_data ) + * Function: H5IMget_palette + * + * Purpose: Read palette + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu + * + * Date: August 30, 2001 + * + * Comments: + * based on HDF5 Image and Palette Specification + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5IMget_palette(hid_t loc_id, const char *image_name, int pal_number, unsigned char *pal_data) { - hid_t did; - int has_pal; - hid_t atid=-1; - hid_t aid; - hid_t asid=-1; - hssize_t n_refs; - hsize_t dim_ref; - hobj_ref_t *refbuf; /* buffer to read references */ - hid_t pal_id; + hid_t did; + int has_pal; + hid_t atid = -1; + hid_t aid; + hid_t asid = -1; + hssize_t n_refs; + hsize_t dim_ref; + hobj_ref_t *refbuf; /* buffer to read references */ + hid_t pal_id; /* check the arguments */ - if (image_name == NULL) - return -1; - if (pal_data == NULL) - return -1; - + if (image_name == NULL) + return -1; + if (pal_data == NULL) + return -1; /* Open the dataset. */ - if((did = H5Dopen2(loc_id, image_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, image_name, H5P_DEFAULT)) < 0) return -1; /* Try to find the attribute "PALETTE" on the >>image<< dataset */ has_pal = H5IM_find_palette(did); - if(has_pal == 1 ) - { - if((aid = H5Aopen(did, "PALETTE", H5P_DEFAULT)) < 0) + if (has_pal == 1) { + if ((aid = H5Aopen(did, "PALETTE", H5P_DEFAULT)) < 0) goto out; - if((atid = H5Aget_type(aid)) < 0) + if ((atid = H5Aget_type(aid)) < 0) goto out; - if(H5Tget_class(atid) < 0) + if (H5Tget_class(atid) < 0) goto out; /* Get the reference(s) */ - if((asid = H5Aget_space(aid)) < 0) + if ((asid = H5Aget_space(aid)) < 0) goto out; n_refs = H5Sget_simple_extent_npoints(asid); dim_ref = (hsize_t)n_refs; - refbuf = (hobj_ref_t*)HDmalloc( sizeof(hobj_ref_t) * (size_t)dim_ref ); + refbuf = (hobj_ref_t *)HDmalloc(sizeof(hobj_ref_t) * (size_t)dim_ref); - if ( H5Aread( aid, atid, refbuf ) < 0) + if (H5Aread(aid, atid, refbuf) < 0) goto out; /* Get the palette id */ - if ( (pal_id = H5Rdereference( did, H5R_OBJECT, &refbuf[pal_number] )) < 0) + if ((pal_id = H5Rdereference(did, H5R_OBJECT, &refbuf[pal_number])) < 0) goto out; /* Read the palette dataset */ - if ( H5Dread( pal_id, H5Dget_type(pal_id), H5S_ALL, H5S_ALL, H5P_DEFAULT, pal_data ) < 0) + if (H5Dread(pal_id, H5Dget_type(pal_id), H5S_ALL, H5S_ALL, H5P_DEFAULT, pal_data) < 0) goto out; /* close */ - if (H5Dclose(pal_id)<0) + if (H5Dclose(pal_id) < 0) goto out; - if ( H5Sclose( asid ) < 0) + if (H5Sclose(asid) < 0) goto out; - if ( H5Tclose( atid ) < 0) + if (H5Tclose(atid) < 0) goto out; - if ( H5Aclose( aid ) < 0) + if (H5Aclose(aid) < 0) goto out; - HDfree( refbuf ); + HDfree(refbuf); } /* Close the image dataset. */ - if ( H5Dclose( did ) < 0) + if (H5Dclose(did) < 0) return -1; return 0; out: - H5Dclose( did ); - H5Sclose( asid ); - H5Tclose( atid ); - H5Aclose( aid ); + H5Dclose(did); + H5Sclose(asid); + H5Tclose(atid); + H5Aclose(aid); return -1; - } /*------------------------------------------------------------------------- -* Function: H5IMis_image -* -* Purpose: -* -* Return: true, false, fail -* -* Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu -* -* Date: August 30, 2001 -* -* Comments: -* based on HDF5 Image and Palette Specification -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5IMis_image( hid_t loc_id, - const char *dset_name ) + * Function: H5IMis_image + * + * Purpose: + * + * Return: true, false, fail + * + * Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu + * + * Date: August 30, 2001 + * + * Comments: + * based on HDF5 Image and Palette Specification + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5IMis_image(hid_t loc_id, const char *dset_name) { - hid_t did; - int has_class; - hid_t atid; - hid_t aid = -1; - char* attr_data; /* Name of attribute */ - hsize_t storage_size; /* Size of storage for attribute */ - herr_t ret; + hid_t did; + int has_class; + hid_t atid; + hid_t aid = -1; + char * attr_data; /* Name of attribute */ + hsize_t storage_size; /* Size of storage for attribute */ + herr_t ret; /* check the arguments */ - if (dset_name == NULL) - return -1; + if (dset_name == NULL) + return -1; /* Assume initially fail condition */ ret = -1; /* Open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) return -1; /* Try to find the attribute "CLASS" on the dataset */ has_class = H5LT_find_attribute(did, "CLASS"); - if(has_class == 0) - { + if (has_class == 0) { H5Dclose(did); return 0; } - else if(has_class == 1) - { + else if (has_class == 1) { - if((aid = H5Aopen(did, "CLASS", H5P_DEFAULT)) < 0) + if ((aid = H5Aopen(did, "CLASS", H5P_DEFAULT)) < 0) goto out; - if((atid = H5Aget_type(aid)) < 0) + if ((atid = H5Aget_type(aid)) < 0) goto out; - /* check to make sure attribute is a string */ - if(H5T_STRING != H5Tget_class(atid)) - goto out; + /* check to make sure attribute is a string */ + if (H5T_STRING != H5Tget_class(atid)) + goto out; - /* check to make sure string is null-terminated */ - if(H5T_STR_NULLTERM != H5Tget_strpad(atid)) - goto out; + /* check to make sure string is null-terminated */ + if (H5T_STR_NULLTERM != H5Tget_strpad(atid)) + goto out; - /* allocate buffer large enough to hold string */ - if((storage_size = H5Aget_storage_size(aid)) == 0) - goto out; + /* allocate buffer large enough to hold string */ + if ((storage_size = H5Aget_storage_size(aid)) == 0) + goto out; - attr_data = (char*)HDmalloc( (size_t)storage_size * sizeof(char) + 1); - if(attr_data == NULL) - goto out; + attr_data = (char *)HDmalloc((size_t)storage_size * sizeof(char) + 1); + if (attr_data == NULL) + goto out; - if(H5Aread(aid, atid, attr_data) < 0) + if (H5Aread(aid, atid, attr_data) < 0) goto out; - if(HDstrncmp(attr_data, IMAGE_CLASS, MIN(HDstrlen(IMAGE_CLASS),HDstrlen(attr_data))) == 0) + if (HDstrncmp(attr_data, IMAGE_CLASS, MIN(HDstrlen(IMAGE_CLASS), HDstrlen(attr_data))) == 0) ret = 1; else ret = 0; - HDfree(attr_data); + HDfree(attr_data); - if ( H5Tclose( atid ) < 0) + if (H5Tclose(atid) < 0) goto out; - if ( H5Aclose( aid ) < 0) + if (H5Aclose(aid) < 0) goto out; - } /* Close the dataset. */ - if ( H5Dclose( did ) < 0) + if (H5Dclose(did) < 0) return -1; return ret; out: - H5Dclose( did ); + H5Dclose(did); return -1; - } /*------------------------------------------------------------------------- -* Function: H5IMis_palette -* -* Purpose: -* -* Return: true, false, fail -* -* Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu -* -* Date: August 30, 2001 -* -* Comments: -* based on HDF5 Image and Palette Specification -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5IMis_palette( hid_t loc_id, - const char *dset_name ) + * Function: H5IMis_palette + * + * Purpose: + * + * Return: true, false, fail + * + * Programmer: Pedro Vicente Nunes, pvn@ncsa.uiuc.edu + * + * Date: August 30, 2001 + * + * Comments: + * based on HDF5 Image and Palette Specification + * + * Modifications: + * + *------------------------------------------------------------------------- + */ + +herr_t +H5IMis_palette(hid_t loc_id, const char *dset_name) { - hid_t did; - int has_class; - hid_t atid; - hid_t aid = -1; - char* attr_data; /* Name of attribute */ - hsize_t storage_size; /* Size of storage for attribute */ - herr_t ret; + hid_t did; + int has_class; + hid_t atid; + hid_t aid = -1; + char * attr_data; /* Name of attribute */ + hsize_t storage_size; /* Size of storage for attribute */ + herr_t ret; /* check the arguments */ - if (dset_name == NULL) - return -1; + if (dset_name == NULL) + return -1; /* Assume initially fail condition */ ret = -1; /* Open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) return -1; /* Try to find the attribute "CLASS" on the dataset */ has_class = H5LT_find_attribute(did, "CLASS"); - if(has_class == 0) - { - H5Dclose( did ); + if (has_class == 0) { + H5Dclose(did); return 0; } - else if(has_class == 1) - { + else if (has_class == 1) { - if((aid = H5Aopen(did, "CLASS", H5P_DEFAULT)) < 0) + if ((aid = H5Aopen(did, "CLASS", H5P_DEFAULT)) < 0) goto out; - if((atid = H5Aget_type(aid)) < 0) + if ((atid = H5Aget_type(aid)) < 0) goto out; - /* check to make sure attribute is a string */ - if(H5T_STRING != H5Tget_class(atid)) - goto out; + /* check to make sure attribute is a string */ + if (H5T_STRING != H5Tget_class(atid)) + goto out; - /* check to make sure string is null-terminated */ - if(H5T_STR_NULLTERM != H5Tget_strpad(atid)) - goto out; + /* check to make sure string is null-terminated */ + if (H5T_STR_NULLTERM != H5Tget_strpad(atid)) + goto out; - /* allocate buffer large enough to hold string */ - if((storage_size = H5Aget_storage_size(aid)) == 0) - goto out; + /* allocate buffer large enough to hold string */ + if ((storage_size = H5Aget_storage_size(aid)) == 0) + goto out; - attr_data = (char*)HDmalloc( (size_t)storage_size * sizeof(char) + 1); - if(attr_data == NULL) - goto out; + attr_data = (char *)HDmalloc((size_t)storage_size * sizeof(char) + 1); + if (attr_data == NULL) + goto out; - if(H5Aread(aid, atid, attr_data) < 0) + if (H5Aread(aid, atid, attr_data) < 0) goto out; - if(HDstrncmp(attr_data, PALETTE_CLASS, MIN(HDstrlen(PALETTE_CLASS),HDstrlen(attr_data))) == 0) + if (HDstrncmp(attr_data, PALETTE_CLASS, MIN(HDstrlen(PALETTE_CLASS), HDstrlen(attr_data))) == 0) ret = 1; else ret = 0; - HDfree(attr_data); + HDfree(attr_data); - if ( H5Tclose( atid ) < 0) + if (H5Tclose(atid) < 0) goto out; - if ( H5Aclose( aid ) < 0) + if (H5Aclose(aid) < 0) goto out; - } /* Close the dataset. */ - if ( H5Dclose( did ) < 0) + if (H5Dclose(did) < 0) return -1; return ret; out: - H5Dclose( did ); + H5Dclose(did); return -1; - } - diff --git a/hl/src/H5IMprivate.h b/hl/src/H5IMprivate.h index 6776c9d..8803a4c 100644 --- a/hl/src/H5IMprivate.h +++ b/hl/src/H5IMprivate.h @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -20,20 +20,16 @@ /* public IM prototypes */ #include "H5IMpublic.h" - #define IMAGE_CLASS "IMAGE" #define PALETTE_CLASS "PALETTE" #define IMAGE_VERSION "1.2" -#define IMAGE8_RANK 2 -#define IMAGE24_RANK 3 - +#define IMAGE8_RANK 2 +#define IMAGE24_RANK 3 /*------------------------------------------------------------------------- * Private functions *------------------------------------------------------------------------- */ -H5_HLDLL herr_t H5IM_find_palette(hid_t loc_id ); - +H5_HLDLL herr_t H5IM_find_palette(hid_t loc_id); #endif - diff --git a/hl/src/H5IMpublic.h b/hl/src/H5IMpublic.h index a95e439..fae4902 100644 --- a/hl/src/H5IMpublic.h +++ b/hl/src/H5IMpublic.h @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -14,69 +14,38 @@ #ifndef _H5IMpublic_H #define _H5IMpublic_H - #ifdef __cplusplus extern "C" { #endif +H5_HLDLL herr_t H5IMmake_image_8bit(hid_t loc_id, const char *dset_name, hsize_t width, hsize_t height, + const unsigned char *buffer); + +H5_HLDLL herr_t H5IMmake_image_24bit(hid_t loc_id, const char *dset_name, hsize_t width, hsize_t height, + const char *interlace, const unsigned char *buffer); + +H5_HLDLL herr_t H5IMget_image_info(hid_t loc_id, const char *dset_name, hsize_t *width, hsize_t *height, + hsize_t *planes, char *interlace, hssize_t *npals); + +H5_HLDLL herr_t H5IMread_image(hid_t loc_id, const char *dset_name, unsigned char *buffer); + +H5_HLDLL herr_t H5IMmake_palette(hid_t loc_id, const char *pal_name, const hsize_t *pal_dims, + const unsigned char *pal_data); + +H5_HLDLL herr_t H5IMlink_palette(hid_t loc_id, const char *image_name, const char *pal_name); + +H5_HLDLL herr_t H5IMunlink_palette(hid_t loc_id, const char *image_name, const char *pal_name); + +H5_HLDLL herr_t H5IMget_npalettes(hid_t loc_id, const char *image_name, hssize_t *npals); + +H5_HLDLL herr_t H5IMget_palette_info(hid_t loc_id, const char *image_name, int pal_number, hsize_t *pal_dims); + +H5_HLDLL herr_t H5IMget_palette(hid_t loc_id, const char *image_name, int pal_number, + unsigned char *pal_data); + +H5_HLDLL herr_t H5IMis_image(hid_t loc_id, const char *dset_name); -H5_HLDLL herr_t H5IMmake_image_8bit( hid_t loc_id, - const char *dset_name, - hsize_t width, - hsize_t height, - const unsigned char *buffer ); - -H5_HLDLL herr_t H5IMmake_image_24bit( hid_t loc_id, - const char *dset_name, - hsize_t width, - hsize_t height, - const char *interlace, - const unsigned char *buffer ); - -H5_HLDLL herr_t H5IMget_image_info( hid_t loc_id, - const char *dset_name, - hsize_t *width, - hsize_t *height, - hsize_t *planes, - char *interlace, - hssize_t *npals ); - -H5_HLDLL herr_t H5IMread_image( hid_t loc_id, - const char *dset_name, - unsigned char *buffer ); - -H5_HLDLL herr_t H5IMmake_palette( hid_t loc_id, - const char *pal_name, - const hsize_t *pal_dims, - const unsigned char *pal_data ); - -H5_HLDLL herr_t H5IMlink_palette( hid_t loc_id, - const char *image_name, - const char *pal_name ); - -H5_HLDLL herr_t H5IMunlink_palette( hid_t loc_id, - const char *image_name, - const char *pal_name ); - -H5_HLDLL herr_t H5IMget_npalettes( hid_t loc_id, - const char *image_name, - hssize_t *npals ); - -H5_HLDLL herr_t H5IMget_palette_info( hid_t loc_id, - const char *image_name, - int pal_number, - hsize_t *pal_dims ); - -H5_HLDLL herr_t H5IMget_palette( hid_t loc_id, - const char *image_name, - int pal_number, - unsigned char *pal_data ); - -H5_HLDLL herr_t H5IMis_image( hid_t loc_id, - const char *dset_name ); - -H5_HLDLL herr_t H5IMis_palette( hid_t loc_id, - const char *dset_name ); +H5_HLDLL herr_t H5IMis_palette(hid_t loc_id, const char *dset_name); #ifdef __cplusplus } diff --git a/hl/src/H5LT.c b/hl/src/H5LT.c index a9db3b4..81c547e 100644 --- a/hl/src/H5LT.c +++ b/hl/src/H5LT.c @@ -1,48 +1,41 @@ /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * -* Copyright by The HDF Group. * -* Copyright by the Board of Trustees of the University of Illinois. * -* All rights reserved. * -* * -* This file is part of HDF5. The full HDF5 copyright notice, including * -* terms governing use, modification, and redistribution, is contained in * + * Copyright by The HDF Group. * + * Copyright by the Board of Trustees of the University of Illinois. * + * All rights reserved. * + * * + * This file is part of HDF5. The full HDF5 copyright notice, including * + * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * -* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ - -#include <string.h> -#include <stdlib.h> -#include <assert.h> -#include <stdio.h> + * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ #include "H5LTprivate.h" -#include "H5private.h" /* For Lex and Yacc */ -#define COL 3 -#define LIMIT 512 -#define INCREMENT 1024 -#define TMP_LEN 256 -#define MAX(a,b) (((a)>(b)) ? (a) : (b)) -size_t input_len; -char *myinput; -size_t indent = 0; - - -/* File Image operations - - A file image is a representation of an HDF5 file in a memory - buffer. In order to perform operations on an image in a similar way +#define COL 3 +#define LIMIT 512 +#define INCREMENT 1024 +#define TMP_LEN 256 +#define MAX(a, b) (((a) > (b)) ? (a) : (b)) +size_t input_len; +char * myinput; +size_t indent = 0; + +/* File Image operations + + A file image is a representation of an HDF5 file in a memory + buffer. In order to perform operations on an image in a similar way to a file, the application buffer is copied to a FAPL buffer, which - in turn is copied to a VFD buffer. Buffer copying can decrease - performance, especially when using large file images. A solution to - this issue is to simulate the copying of the application buffer, - when actually the same buffer is used for the FAPL and the VFD. - This is implemented by using callbacks that simulate the standard - functions for memory management (additional callbacks are used for - the management of associated data structures). From the application - standpoint, a file handle can be obtained from a file image by using + in turn is copied to a VFD buffer. Buffer copying can decrease + performance, especially when using large file images. A solution to + this issue is to simulate the copying of the application buffer, + when actually the same buffer is used for the FAPL and the VFD. + This is implemented by using callbacks that simulate the standard + functions for memory management (additional callbacks are used for + the management of associated data structures). From the application + standpoint, a file handle can be obtained from a file image by using the API routine H5LTopen_file_image(). This function takes a flag argument that indicates the HDF5 library how to handle the given image; several flag values can be combined by using the bitwise OR operator. @@ -62,180 +55,178 @@ size_t indent = 0; well. The application is responsible to release the image buffer. */ -/* Data structure to pass application data to callbacks. */ +/* Data structure to pass application data to callbacks. */ typedef struct { - void *app_image_ptr; /* Pointer to application buffer */ - size_t app_image_size; /* Size of application buffer */ - void *fapl_image_ptr; /* Pointer to FAPL buffer */ - size_t fapl_image_size; /* Size of FAPL buffer */ - int fapl_ref_count; /* Reference counter for FAPL buffer */ - void *vfd_image_ptr; /* Pointer to VFD buffer */ - size_t vfd_image_size; /* Size of VFD buffer */ - int vfd_ref_count; /* Reference counter for VFD buffer */ - unsigned flags; /* Flags indicate how the file image will */ - /* be open */ - int ref_count; /* Reference counter on udata struct */ + void * app_image_ptr; /* Pointer to application buffer */ + size_t app_image_size; /* Size of application buffer */ + void * fapl_image_ptr; /* Pointer to FAPL buffer */ + size_t fapl_image_size; /* Size of FAPL buffer */ + int fapl_ref_count; /* Reference counter for FAPL buffer */ + void * vfd_image_ptr; /* Pointer to VFD buffer */ + size_t vfd_image_size; /* Size of VFD buffer */ + int vfd_ref_count; /* Reference counter for VFD buffer */ + unsigned flags; /* Flags indicate how the file image will */ + /* be open */ + int ref_count; /* Reference counter on udata struct */ } H5LT_file_image_ud_t; /* callbacks prototypes for file image ops */ -static void *image_malloc(size_t size, H5FD_file_image_op_t file_image_op, void *udata); -static void *image_memcpy(void *dest, const void *src, size_t size, H5FD_file_image_op_t file_image_op, void *udata); -static void *image_realloc(void *ptr, size_t size, H5FD_file_image_op_t file_image_op, void *udata); +static void * image_malloc(size_t size, H5FD_file_image_op_t file_image_op, void *udata); +static void * image_memcpy(void *dest, const void *src, size_t size, H5FD_file_image_op_t file_image_op, + void *udata); +static void * image_realloc(void *ptr, size_t size, H5FD_file_image_op_t file_image_op, void *udata); static herr_t image_free(void *ptr, H5FD_file_image_op_t file_image_op, void *udata); -static void *udata_copy(void *udata); +static void * udata_copy(void *udata); static herr_t udata_free(void *udata); /* Definition of callbacks for file image operations. */ - -/*------------------------------------------------------------------------- -* Function: image_malloc -* -* Purpose: Simulates malloc() function to avoid copying file images. -* The application buffer is set to the buffer on only one FAPL. -* Then the FAPL buffer can be copied to other FAPL buffers or -* to only one VFD buffer. -* -* Return: Address of "allocated" buffer, if successful. Otherwise, it returns -* NULL. -* -* Programmer: Christian Chilan -* -* Date: October 3, 2011 -* -*------------------------------------------------------------------------- -*/ +/*------------------------------------------------------------------------- + * Function: image_malloc + * + * Purpose: Simulates malloc() function to avoid copying file images. + * The application buffer is set to the buffer on only one FAPL. + * Then the FAPL buffer can be copied to other FAPL buffers or + * to only one VFD buffer. + * + * Return: Address of "allocated" buffer, if successful. Otherwise, it returns + * NULL. + * + * Programmer: Christian Chilan + * + * Date: October 3, 2011 + * + *------------------------------------------------------------------------- + */ static void * image_malloc(size_t size, H5FD_file_image_op_t file_image_op, void *_udata) { - H5LT_file_image_ud_t *udata = (H5LT_file_image_ud_t *)_udata; - void * return_value = NULL; - + H5LT_file_image_ud_t *udata = (H5LT_file_image_ud_t *)_udata; + void * return_value = NULL; + /* callback is only used if the application buffer is not actually copied */ - if (!(udata->flags & H5LT_FILE_IMAGE_DONT_COPY)) + if (!(udata->flags & H5LT_FILE_IMAGE_DONT_COPY)) goto out; - switch ( file_image_op ) { + switch (file_image_op) { /* the app buffer is "copied" to only one FAPL. Afterwards, FAPLs can be "copied" */ case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_SET: - if (udata->app_image_ptr == NULL) + if (udata->app_image_ptr == NULL) goto out; - if (udata->app_image_size != size) + if (udata->app_image_size != size) goto out; - if (udata->fapl_image_ptr != NULL) + if (udata->fapl_image_ptr != NULL) goto out; - if (udata->fapl_image_size != 0) + if (udata->fapl_image_size != 0) goto out; - if (udata->fapl_ref_count != 0) + if (udata->fapl_ref_count != 0) goto out; - udata->fapl_image_ptr = udata->app_image_ptr; + udata->fapl_image_ptr = udata->app_image_ptr; udata->fapl_image_size = udata->app_image_size; - return_value = udata->fapl_image_ptr; + return_value = udata->fapl_image_ptr; udata->fapl_ref_count++; - break; + break; - case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_COPY: - if (udata->fapl_image_ptr == NULL) + case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_COPY: + if (udata->fapl_image_ptr == NULL) goto out; - if (udata->fapl_image_size != size) + if (udata->fapl_image_size != size) goto out; - if (udata->fapl_ref_count == 0) + if (udata->fapl_ref_count == 0) goto out; return_value = udata->fapl_image_ptr; udata->fapl_ref_count++; - break; + break; case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_GET: goto out; case H5FD_FILE_IMAGE_OP_FILE_OPEN: /* FAPL buffer is "copied" to only one VFD buffer */ - if (udata->vfd_image_ptr != NULL) + if (udata->vfd_image_ptr != NULL) goto out; - if (udata->vfd_image_size != 0) + if (udata->vfd_image_size != 0) goto out; - if (udata->vfd_ref_count != 0) + if (udata->vfd_ref_count != 0) goto out; - if (udata->fapl_image_ptr == NULL) + if (udata->fapl_image_ptr == NULL) goto out; - if (udata->fapl_image_size != size) + if (udata->fapl_image_size != size) goto out; - if (udata->fapl_ref_count == 0) + if (udata->fapl_ref_count == 0) goto out; - udata->vfd_image_ptr = udata->fapl_image_ptr; - udata->vfd_image_size = size; + udata->vfd_image_ptr = udata->fapl_image_ptr; + udata->vfd_image_size = size; udata->vfd_ref_count++; return_value = udata->vfd_image_ptr; break; - /* added unused labels to shut the compiler up */ - case H5FD_FILE_IMAGE_OP_NO_OP: - case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_CLOSE: - case H5FD_FILE_IMAGE_OP_FILE_RESIZE: - case H5FD_FILE_IMAGE_OP_FILE_CLOSE: + /* added unused labels to shut the compiler up */ + case H5FD_FILE_IMAGE_OP_NO_OP: + case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_CLOSE: + case H5FD_FILE_IMAGE_OP_FILE_RESIZE: + case H5FD_FILE_IMAGE_OP_FILE_CLOSE: default: goto out; } /* end switch */ - return(return_value); + return (return_value); out: return NULL; } /* end image_malloc() */ - -/*------------------------------------------------------------------------- -* Function: image_memcpy -* -* Purpose: Simulates memcpy() function to avoid copying file images. -* The image buffer can be set to only one FAPL buffer, and -* "copied" to only one VFD buffer. The FAPL buffer can be -* "copied" to other FAPLs buffers. -* -* Return: The address of the destination buffer, if successful. Otherwise, it -* returns NULL. -* -* Programmer: Christian Chilan -* -* Date: October 3, 2011 -* -*------------------------------------------------------------------------- -*/ +/*------------------------------------------------------------------------- + * Function: image_memcpy + * + * Purpose: Simulates memcpy() function to avoid copying file images. + * The image buffer can be set to only one FAPL buffer, and + * "copied" to only one VFD buffer. The FAPL buffer can be + * "copied" to other FAPLs buffers. + * + * Return: The address of the destination buffer, if successful. Otherwise, it + * returns NULL. + * + * Programmer: Christian Chilan + * + * Date: October 3, 2011 + * + *------------------------------------------------------------------------- + */ static void * -image_memcpy(void *dest, const void *src, size_t size, H5FD_file_image_op_t file_image_op, - void *_udata) +image_memcpy(void *dest, const void *src, size_t size, H5FD_file_image_op_t file_image_op, void *_udata) { H5LT_file_image_ud_t *udata = (H5LT_file_image_ud_t *)_udata; /* callback is only used if the application buffer is not actually copied */ - if (!(udata->flags & H5LT_FILE_IMAGE_DONT_COPY)) + if (!(udata->flags & H5LT_FILE_IMAGE_DONT_COPY)) goto out; - switch(file_image_op) { + switch (file_image_op) { case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_SET: - if (dest != udata->fapl_image_ptr) + if (dest != udata->fapl_image_ptr) goto out; - if (src != udata->app_image_ptr) + if (src != udata->app_image_ptr) goto out; - if (size != udata->fapl_image_size) + if (size != udata->fapl_image_size) goto out; - if (size != udata->app_image_size) + if (size != udata->app_image_size) goto out; - if (udata->fapl_ref_count == 0) + if (udata->fapl_ref_count == 0) goto out; break; case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_COPY: - if (dest != udata->fapl_image_ptr) + if (dest != udata->fapl_image_ptr) goto out; - if (src != udata->fapl_image_ptr) + if (src != udata->fapl_image_ptr) goto out; - if (size != udata->fapl_image_size) + if (size != udata->fapl_image_size) goto out; - if (udata->fapl_ref_count < 2) + if (udata->fapl_ref_count < 2) goto out; break; @@ -243,700 +234,659 @@ image_memcpy(void *dest, const void *src, size_t size, H5FD_file_image_op_t file goto out; case H5FD_FILE_IMAGE_OP_FILE_OPEN: - if (dest != udata->vfd_image_ptr) + if (dest != udata->vfd_image_ptr) goto out; - if (src != udata->fapl_image_ptr) + if (src != udata->fapl_image_ptr) goto out; - if (size != udata->vfd_image_size) + if (size != udata->vfd_image_size) goto out; - if (size != udata->fapl_image_size) + if (size != udata->fapl_image_size) goto out; - if (udata->fapl_ref_count == 0) + if (udata->fapl_ref_count == 0) goto out; - if (udata->vfd_ref_count != 1) + if (udata->vfd_ref_count != 1) goto out; break; - /* added unused labels to shut the compiler up */ - case H5FD_FILE_IMAGE_OP_NO_OP: - case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_CLOSE: - case H5FD_FILE_IMAGE_OP_FILE_RESIZE: - case H5FD_FILE_IMAGE_OP_FILE_CLOSE: + /* added unused labels to shut the compiler up */ + case H5FD_FILE_IMAGE_OP_NO_OP: + case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_CLOSE: + case H5FD_FILE_IMAGE_OP_FILE_RESIZE: + case H5FD_FILE_IMAGE_OP_FILE_CLOSE: default: goto out; } /* end switch */ - return(dest); + return (dest); out: return NULL; } /* end image_memcpy() */ - -/*------------------------------------------------------------------------- -* Function: image_realloc -* -* Purpose: Reallocates the shared application image buffer and updates data -* structures that manage buffer "copying". -* -* Return: Address of reallocated buffer, if successful. Otherwise, it returns -* NULL. -* -* Programmer: Christian Chilan -* -* Date: October 3, 2011 -* -*------------------------------------------------------------------------- -*/ +/*------------------------------------------------------------------------- + * Function: image_realloc + * + * Purpose: Reallocates the shared application image buffer and updates data + * structures that manage buffer "copying". + * + * Return: Address of reallocated buffer, if successful. Otherwise, it returns + * NULL. + * + * Programmer: Christian Chilan + * + * Date: October 3, 2011 + * + *------------------------------------------------------------------------- + */ static void * image_realloc(void *ptr, size_t size, H5FD_file_image_op_t file_image_op, void *_udata) { - H5LT_file_image_ud_t *udata = (H5LT_file_image_ud_t *)_udata; - void * return_value = NULL; + H5LT_file_image_ud_t *udata = (H5LT_file_image_ud_t *)_udata; + void * return_value = NULL; /* callback is only used if the application buffer is not actually copied */ - if (!(udata->flags & H5LT_FILE_IMAGE_DONT_COPY)) + if (!(udata->flags & H5LT_FILE_IMAGE_DONT_COPY)) goto out; - /* realloc() is not allowed when the HDF5 library won't release the image + /* realloc() is not allowed when the HDF5 library won't release the image buffer because reallocation may change the address of the buffer. The new address cannot be communicated to the application to release it. */ - if (udata->flags & H5LT_FILE_IMAGE_DONT_RELEASE) - goto out; + if (udata->flags & H5LT_FILE_IMAGE_DONT_RELEASE) + goto out; /* realloc() is not allowed if the image is open in read-only mode */ - if (!(udata->flags & H5LT_FILE_IMAGE_OPEN_RW)) - goto out; + if (!(udata->flags & H5LT_FILE_IMAGE_OPEN_RW)) + goto out; if (file_image_op == H5FD_FILE_IMAGE_OP_FILE_RESIZE) { - if (udata->vfd_image_ptr != ptr) - goto out; + if (udata->vfd_image_ptr != ptr) + goto out; - if (udata->vfd_ref_count != 1) + if (udata->vfd_ref_count != 1) goto out; if (NULL == (udata->vfd_image_ptr = HDrealloc(ptr, size))) - goto out; - + goto out; + udata->vfd_image_size = size; - return_value = udata->vfd_image_ptr; + return_value = udata->vfd_image_ptr; } /* end if */ else goto out; - return(return_value); + return (return_value); out: return NULL; } /* end image_realloc() */ - /*------------------------------------------------------------------------- -* Function: image_free -* -* Purpose: Simulates deallocation of FAPL and VFD buffers by decreasing -* reference counters. Shared application buffer is actually -* deallocated if there are no outstanding references. -* -* Return: SUCCEED or FAIL -* -* Programmer: Christian Chilan -* -* Date: October 3, 2011 -* -*------------------------------------------------------------------------- -*/ + * Function: image_free + * + * Purpose: Simulates deallocation of FAPL and VFD buffers by decreasing + * reference counters. Shared application buffer is actually + * deallocated if there are no outstanding references. + * + * Return: SUCCEED or FAIL + * + * Programmer: Christian Chilan + * + * Date: October 3, 2011 + * + *------------------------------------------------------------------------- + */ static herr_t image_free(void *ptr, H5FD_file_image_op_t file_image_op, void *_udata) { H5LT_file_image_ud_t *udata = (H5LT_file_image_ud_t *)_udata; /* callback is only used if the application buffer is not actually copied */ - if (!(udata->flags & H5LT_FILE_IMAGE_DONT_COPY)) + if (!(udata->flags & H5LT_FILE_IMAGE_DONT_COPY)) goto out; - switch(file_image_op) { + switch (file_image_op) { case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_CLOSE: - if (udata->fapl_image_ptr != ptr) + if (udata->fapl_image_ptr != ptr) goto out; - if (udata->fapl_ref_count == 0) + if (udata->fapl_ref_count == 0) goto out; udata->fapl_ref_count--; - /* release the shared buffer only if indicated by the respective flag and there are no outstanding references */ + /* release the shared buffer only if indicated by the respective flag and there are no outstanding + * references */ if (udata->fapl_ref_count == 0 && udata->vfd_ref_count == 0 && - !(udata->flags & H5LT_FILE_IMAGE_DONT_RELEASE)) { + !(udata->flags & H5LT_FILE_IMAGE_DONT_RELEASE)) { HDfree(udata->fapl_image_ptr); - udata->app_image_ptr = NULL; + udata->app_image_ptr = NULL; udata->fapl_image_ptr = NULL; - udata->vfd_image_ptr = NULL; + udata->vfd_image_ptr = NULL; } /* end if */ break; case H5FD_FILE_IMAGE_OP_FILE_CLOSE: - if (udata->vfd_image_ptr != ptr) + if (udata->vfd_image_ptr != ptr) goto out; - if (udata->vfd_ref_count != 1) + if (udata->vfd_ref_count != 1) goto out; udata->vfd_ref_count--; - /* release the shared buffer only if indicated by the respective flag and there are no outstanding references */ + /* release the shared buffer only if indicated by the respective flag and there are no outstanding + * references */ if (udata->fapl_ref_count == 0 && udata->vfd_ref_count == 0 && - !(udata->flags & H5LT_FILE_IMAGE_DONT_RELEASE)) { + !(udata->flags & H5LT_FILE_IMAGE_DONT_RELEASE)) { HDfree(udata->vfd_image_ptr); - udata->app_image_ptr = NULL; + udata->app_image_ptr = NULL; udata->fapl_image_ptr = NULL; - udata->vfd_image_ptr = NULL; + udata->vfd_image_ptr = NULL; } /* end if */ break; - /* added unused labels to keep the compiler quite */ - case H5FD_FILE_IMAGE_OP_NO_OP: - case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_SET: - case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_COPY: - case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_GET: - case H5FD_FILE_IMAGE_OP_FILE_OPEN: - case H5FD_FILE_IMAGE_OP_FILE_RESIZE: - default: + /* added unused labels to keep the compiler quite */ + case H5FD_FILE_IMAGE_OP_NO_OP: + case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_SET: + case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_COPY: + case H5FD_FILE_IMAGE_OP_PROPERTY_LIST_GET: + case H5FD_FILE_IMAGE_OP_FILE_OPEN: + case H5FD_FILE_IMAGE_OP_FILE_RESIZE: + default: goto out; } /* end switch */ - return(SUCCEED); + return (SUCCEED); out: - return(FAIL); + return (FAIL); } /* end image_free() */ - -/*------------------------------------------------------------------------- -* Function: udata_copy -* -* Purpose: Simulates the copying of the user data structure utilized in the -* management of the "copying" of file images. -* -* Return: Address of "newly allocated" structure, if successful. Otherwise, it -* returns NULL. -* -* Programmer: Christian Chilan -* -* Date: October 3, 2011 -* -*------------------------------------------------------------------------- -*/ +/*------------------------------------------------------------------------- + * Function: udata_copy + * + * Purpose: Simulates the copying of the user data structure utilized in the + * management of the "copying" of file images. + * + * Return: Address of "newly allocated" structure, if successful. Otherwise, it + * returns NULL. + * + * Programmer: Christian Chilan + * + * Date: October 3, 2011 + * + *------------------------------------------------------------------------- + */ static void * udata_copy(void *_udata) { H5LT_file_image_ud_t *udata = (H5LT_file_image_ud_t *)_udata; /* callback is only used if the application buffer is not actually copied */ - if (!(udata->flags & H5LT_FILE_IMAGE_DONT_COPY)) + if (!(udata->flags & H5LT_FILE_IMAGE_DONT_COPY)) goto out; - if (udata->ref_count == 0) + if (udata->ref_count == 0) goto out; udata->ref_count++; - return(udata); + return (udata); out: return NULL; } /* end udata_copy */ - /*------------------------------------------------------------------------- -* Function: udata_free -* -* Purpose: Simulates deallocation of the user data structure utilized in the -* management of the "copying" of file images. The data structure is -* actually deallocated when there are no outstanding references. -* -* Return: SUCCEED or FAIL -* -* Programmer: Christian Chilan -* -* Date: October 3, 2011 -* -*------------------------------------------------------------------------- -*/ + * Function: udata_free + * + * Purpose: Simulates deallocation of the user data structure utilized in the + * management of the "copying" of file images. The data structure is + * actually deallocated when there are no outstanding references. + * + * Return: SUCCEED or FAIL + * + * Programmer: Christian Chilan + * + * Date: October 3, 2011 + * + *------------------------------------------------------------------------- + */ static herr_t udata_free(void *_udata) { H5LT_file_image_ud_t *udata = (H5LT_file_image_ud_t *)_udata; /* callback is only used if the application buffer is not actually copied */ - if (!(udata->flags & H5LT_FILE_IMAGE_DONT_COPY)) + if (!(udata->flags & H5LT_FILE_IMAGE_DONT_COPY)) goto out; - if (udata->ref_count == 0) + if (udata->ref_count == 0) goto out; udata->ref_count--; /* checks that there are no references outstanding before deallocating udata */ - if (udata->ref_count == 0 && udata->fapl_ref_count == 0 && - udata->vfd_ref_count == 0) + if (udata->ref_count == 0 && udata->fapl_ref_count == 0 && udata->vfd_ref_count == 0) HDfree(udata); - return(SUCCEED); + return (SUCCEED); -out: - return(FAIL); +out: + return (FAIL); } /* end udata_free */ /* End of callbacks definitions for file image operations */ /*------------------------------------------------------------------------- -* -* internal functions -* -*------------------------------------------------------------------------- -*/ -static herr_t H5LT_get_attribute_mem(hid_t loc_id, - const char *obj_name, - const char *attr_name, - hid_t mem_type_id, - void *data); - -/*------------------------------------------------------------------------- -* Function: H5LT_make_dataset -* -* Purpose: Creates and writes a dataset of a type tid -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Quincey Koziol, koziol@hdfgroup.org -* -* Date: October 10, 2007 -* -*------------------------------------------------------------------------- -*/ + * + * internal functions + * + *------------------------------------------------------------------------- + */ +static herr_t H5LT_get_attribute_mem(hid_t loc_id, const char *obj_name, const char *attr_name, + hid_t mem_type_id, void *data); + +/*------------------------------------------------------------------------- + * Function: H5LT_make_dataset + * + * Purpose: Creates and writes a dataset of a type tid + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Quincey Koziol + * + * Date: October 10, 2007 + * + *------------------------------------------------------------------------- + */ static herr_t -H5LT_make_dataset_numerical( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - hid_t tid, - const void *data ) +H5LT_make_dataset_numerical(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, hid_t tid, + const void *data) { - hid_t did = -1, sid = -1; + hid_t did = -1, sid = -1; /* check the arguments */ - if (dset_name == NULL) - return -1; + if (dset_name == NULL) + return -1; /* Create the data space for the dataset. */ - if((sid = H5Screate_simple(rank, dims, NULL)) < 0) + if ((sid = H5Screate_simple(rank, dims, NULL)) < 0) return -1; /* Create the dataset. */ - if((did = H5Dcreate2(loc_id, dset_name, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((did = H5Dcreate2(loc_id, dset_name, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; /* Write the dataset only if there is data to write */ - if(data) - if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, data) < 0) + if (data) + if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, data) < 0) goto out; /* End access to the dataset and release resources used by it. */ - if(H5Dclose(did) < 0) + if (H5Dclose(did) < 0) return -1; /* Terminate access to the data space. */ - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) return -1; return 0; out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Dclose(did); H5Sclose(sid); - } H5E_END_TRY; + } + H5E_END_TRY; return -1; } /*------------------------------------------------------------------------- -* -* Public functions -* -*------------------------------------------------------------------------- -*/ - -/*------------------------------------------------------------------------- -* Function: H5LTmake_dataset -* -* Purpose: Creates and writes a dataset of a type tid -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: March 19, 2001 -* -* Comments: -* -* Modifications: -* -* -*------------------------------------------------------------------------- -*/ + * + * Public functions + * + *------------------------------------------------------------------------- + */ + +/*------------------------------------------------------------------------- + * Function: H5LTmake_dataset + * + * Purpose: Creates and writes a dataset of a type tid + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: March 19, 2001 + * + * Comments: + * + * Modifications: + * + * + *------------------------------------------------------------------------- + */ -herr_t H5LTmake_dataset( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - hid_t tid, - const void *data ) +herr_t +H5LTmake_dataset(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, hid_t tid, + const void *data) { - return(H5LT_make_dataset_numerical(loc_id, dset_name, rank, dims, tid, data)); + return (H5LT_make_dataset_numerical(loc_id, dset_name, rank, dims, tid, data)); } /*------------------------------------------------------------------------- -* Function: H5LTmake_dataset_char -* -* Purpose: Creates and writes a dataset of H5T_NATIVE_CHAR type -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 14, 2001 -* -* Comments: -* -* Modifications: -* -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTmake_dataset_char + * + * Purpose: Creates and writes a dataset of H5T_NATIVE_CHAR type + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 14, 2001 + * + * Comments: + * + * Modifications: + * + * + *------------------------------------------------------------------------- + */ -herr_t H5LTmake_dataset_char( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - const char *data ) +herr_t +H5LTmake_dataset_char(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, const char *data) { - return(H5LT_make_dataset_numerical(loc_id, dset_name, rank, dims, H5T_NATIVE_CHAR, data)); + return (H5LT_make_dataset_numerical(loc_id, dset_name, rank, dims, H5T_NATIVE_CHAR, data)); } - /*------------------------------------------------------------------------- -* Function: H5LTmake_dataset_short -* -* Purpose: Creates and writes a dataset of H5T_NATIVE_SHORT type -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 14, 2001 -* -* Comments: -* -* Modifications: -* -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTmake_dataset_short + * + * Purpose: Creates and writes a dataset of H5T_NATIVE_SHORT type + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 14, 2001 + * + * Comments: + * + * Modifications: + * + * + *------------------------------------------------------------------------- + */ - -herr_t H5LTmake_dataset_short( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - const short *data ) +herr_t +H5LTmake_dataset_short(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, const short *data) { - return(H5LT_make_dataset_numerical(loc_id, dset_name, rank, dims, H5T_NATIVE_SHORT, data)); + return (H5LT_make_dataset_numerical(loc_id, dset_name, rank, dims, H5T_NATIVE_SHORT, data)); } /*------------------------------------------------------------------------- -* Function: H5LTmake_dataset_int -* -* Purpose: Creates and writes a dataset of H5T_NATIVE_INT type -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 14, 2001 -* -* Comments: -* -* Modifications: -* -* -*------------------------------------------------------------------------- -*/ - + * Function: H5LTmake_dataset_int + * + * Purpose: Creates and writes a dataset of H5T_NATIVE_INT type + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 14, 2001 + * + * Comments: + * + * Modifications: + * + * + *------------------------------------------------------------------------- + */ -herr_t H5LTmake_dataset_int( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - const int *data ) +herr_t +H5LTmake_dataset_int(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, const int *data) { - return(H5LT_make_dataset_numerical(loc_id, dset_name, rank, dims, H5T_NATIVE_INT, data)); + return (H5LT_make_dataset_numerical(loc_id, dset_name, rank, dims, H5T_NATIVE_INT, data)); } - - /*------------------------------------------------------------------------- -* Function: H5LTmake_dataset_long -* -* Purpose: Creates and writes a dataset of H5T_NATIVE_LONG type -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 14, 2001 -* -* Comments: -* -* Modifications: -* -* -*------------------------------------------------------------------------- -*/ - + * Function: H5LTmake_dataset_long + * + * Purpose: Creates and writes a dataset of H5T_NATIVE_LONG type + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 14, 2001 + * + * Comments: + * + * Modifications: + * + * + *------------------------------------------------------------------------- + */ -herr_t H5LTmake_dataset_long( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - const long *data ) +herr_t +H5LTmake_dataset_long(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, const long *data) { - return(H5LT_make_dataset_numerical(loc_id, dset_name, rank, dims, H5T_NATIVE_LONG, data)); + return (H5LT_make_dataset_numerical(loc_id, dset_name, rank, dims, H5T_NATIVE_LONG, data)); } /*------------------------------------------------------------------------- -* Function: H5LTmake_dataset_float -* -* Purpose: Creates and writes a dataset of H5T_NATIVE_FLOAT type -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 14, 2001 -* -* Comments: -* -* Modifications: -* -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTmake_dataset_float + * + * Purpose: Creates and writes a dataset of H5T_NATIVE_FLOAT type + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 14, 2001 + * + * Comments: + * + * Modifications: + * + * + *------------------------------------------------------------------------- + */ - -herr_t H5LTmake_dataset_float( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - const float *data ) +herr_t +H5LTmake_dataset_float(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, const float *data) { - return(H5LT_make_dataset_numerical(loc_id, dset_name, rank, dims, H5T_NATIVE_FLOAT, data)); + return (H5LT_make_dataset_numerical(loc_id, dset_name, rank, dims, H5T_NATIVE_FLOAT, data)); } - - /*------------------------------------------------------------------------- -* Function: H5LTmake_dataset_double -* -* Purpose: Creates and writes a dataset of H5T_NATIVE_DOUBLE type -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 14, 2001 -* -* Comments: -* -* Modifications: -* -* -*------------------------------------------------------------------------- -*/ - + * Function: H5LTmake_dataset_double + * + * Purpose: Creates and writes a dataset of H5T_NATIVE_DOUBLE type + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 14, 2001 + * + * Comments: + * + * Modifications: + * + * + *------------------------------------------------------------------------- + */ -herr_t H5LTmake_dataset_double( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - const double *data ) +herr_t +H5LTmake_dataset_double(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, + const double *data) { - return(H5LT_make_dataset_numerical(loc_id, dset_name, rank, dims, H5T_NATIVE_DOUBLE, data)); + return (H5LT_make_dataset_numerical(loc_id, dset_name, rank, dims, H5T_NATIVE_DOUBLE, data)); } - /*------------------------------------------------------------------------- -* Function: H5LTmake_dataset_string -* -* Purpose: Creates and writes a dataset of H5T_C_S1 type -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: October 05, 2004 -* -* Comments: -* -* Modifications: -* -* -*------------------------------------------------------------------------- -*/ - + * Function: H5LTmake_dataset_string + * + * Purpose: Creates and writes a dataset of H5T_C_S1 type + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: October 05, 2004 + * + * Comments: + * + * Modifications: + * + * + *------------------------------------------------------------------------- + */ -herr_t H5LTmake_dataset_string(hid_t loc_id, - const char *dset_name, - const char *buf ) +herr_t +H5LTmake_dataset_string(hid_t loc_id, const char *dset_name, const char *buf) { - hid_t did = -1; - hid_t sid = -1; - hid_t tid = -1; - size_t size; + hid_t did = -1; + hid_t sid = -1; + hid_t tid = -1; + size_t size; /* check the arguments */ - if (dset_name == NULL) - return -1; + if (dset_name == NULL) + return -1; /* create a string data type */ - if((tid = H5Tcopy(H5T_C_S1)) < 0 ) + if ((tid = H5Tcopy(H5T_C_S1)) < 0) goto out; size = HDstrlen(buf) + 1; /* extra null term */ - if(H5Tset_size(tid, size) < 0) + if (H5Tset_size(tid, size) < 0) goto out; - if(H5Tset_strpad(tid, H5T_STR_NULLTERM) < 0) + if (H5Tset_strpad(tid, H5T_STR_NULLTERM) < 0) goto out; /* Create the data space for the dataset. */ - if((sid = H5Screate(H5S_SCALAR)) < 0) + if ((sid = H5Screate(H5S_SCALAR)) < 0) goto out; /* Create the dataset. */ - if((did = H5Dcreate2(loc_id, dset_name, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((did = H5Dcreate2(loc_id, dset_name, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; /* Write the dataset only if there is data to write */ - if(buf) - if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) + if (buf) + if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) goto out; /* close*/ - if(H5Dclose(did) < 0) + if (H5Dclose(did) < 0) return -1; - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) return -1; - if(H5Tclose(tid) < 0) + if (H5Tclose(tid) < 0) goto out; return 0; out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Dclose(did); H5Tclose(tid); H5Sclose(sid); - } H5E_END_TRY; + } + H5E_END_TRY; return -1; } - -/*------------------------------------------------------------------------- -* Function: H5LTopen_file_image -* -* Purpose: Open a user supplied file image using the core file driver. -* -* Return: File identifier, Failure: -1 -* -* Programmer: Christian Chilan -* -* Date: October 3, 2011 -* -*------------------------------------------------------------------------- -*/ -hid_t H5LTopen_file_image(void *buf_ptr, size_t buf_size, unsigned flags) -{ - hid_t fapl, file_id; /* HDF5 identifiers */ - unsigned file_open_flags;/* Flags for image open */ - char file_name[64]; /* Filename buffer */ - size_t alloc_incr; /* Buffer allocation increment */ - size_t min_incr = 65536; /* Minimum buffer increment */ - double buf_prcnt = 0.1f; /* Percentage of buffer size to set - as increment */ - static long file_name_counter; - H5FD_file_image_callbacks_t callbacks = {&image_malloc, &image_memcpy, - &image_realloc, &image_free, - &udata_copy, &udata_free, - (void *)NULL}; +/*------------------------------------------------------------------------- + * Function: H5LTopen_file_image + * + * Purpose: Open a user supplied file image using the core file driver. + * + * Return: File identifier, Failure: -1 + * + * Programmer: Christian Chilan + * + * Date: October 3, 2011 + * + *------------------------------------------------------------------------- + */ +hid_t +H5LTopen_file_image(void *buf_ptr, size_t buf_size, unsigned flags) +{ + hid_t fapl = -1, file_id = -1; /* HDF5 identifiers */ + unsigned file_open_flags; /* Flags for image open */ + char file_name[64]; /* Filename buffer */ + size_t alloc_incr; /* Buffer allocation increment */ + size_t min_incr = 65536; /* Minimum buffer increment */ + double buf_prcnt = 0.1f; /* Percentage of buffer size to set + as increment */ + static long file_name_counter; + H5FD_file_image_callbacks_t callbacks = {&image_malloc, &image_memcpy, &image_realloc, &image_free, + &udata_copy, &udata_free, (void *)NULL}; /* check arguments */ - if (buf_ptr == NULL) + if (buf_ptr == NULL) goto out; - if (buf_size == 0) + if (buf_size == 0) goto out; if (flags & (unsigned)~(H5LT_FILE_IMAGE_ALL)) goto out; /* Create FAPL to transmit file image */ - if ((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) + if ((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) goto out; /* set allocation increment to a percentage of the supplied buffer size, or * a pre-defined minimum increment value, whichever is larger */ - if ((buf_prcnt * buf_size) > min_incr) - alloc_incr = (size_t)(buf_prcnt * buf_size); + if ((size_t)(buf_prcnt * (double)buf_size) > min_incr) + alloc_incr = (size_t)(buf_prcnt * (double)buf_size); else alloc_incr = min_incr; /* Configure FAPL to use the core file driver */ - if (H5Pset_fapl_core(fapl, alloc_incr, FALSE) < 0) + if (H5Pset_fapl_core(fapl, alloc_incr, FALSE) < 0) goto out; /* Set callbacks for file image ops ONLY if the file image is NOT copied */ if (flags & H5LT_FILE_IMAGE_DONT_COPY) { - H5LT_file_image_ud_t *udata; /* Pointer to udata structure */ + H5LT_file_image_ud_t *udata; /* Pointer to udata structure */ /* Allocate buffer to communicate user data to callbacks */ if (NULL == (udata = (H5LT_file_image_ud_t *)HDmalloc(sizeof(H5LT_file_image_ud_t)))) goto out; /* Initialize udata with info about app buffer containing file image and flags */ - udata->app_image_ptr = buf_ptr; - udata->app_image_size = buf_size; - udata->fapl_image_ptr = NULL; + udata->app_image_ptr = buf_ptr; + udata->app_image_size = buf_size; + udata->fapl_image_ptr = NULL; udata->fapl_image_size = 0; - udata->fapl_ref_count = 0; - udata->vfd_image_ptr = NULL; - udata->vfd_image_size = 0; - udata->vfd_ref_count = 0; - udata->flags = flags; - udata->ref_count = 1; /* corresponding to the first FAPL */ + udata->fapl_ref_count = 0; + udata->vfd_image_ptr = NULL; + udata->vfd_image_size = 0; + udata->vfd_ref_count = 0; + udata->flags = flags; + udata->ref_count = 1; /* corresponding to the first FAPL */ /* copy address of udata into callbacks */ callbacks.udata = (void *)udata; /* Set file image callbacks */ - if (H5Pset_file_image_callbacks(fapl, &callbacks) < 0) { + if (H5Pset_file_image_callbacks(fapl, &callbacks) < 0) { HDfree(udata); goto out; } /* end if */ - } /* end if */ + } /* end if */ /* Assign file image in user buffer to FAPL */ - if (H5Pset_file_image(fapl, buf_ptr, buf_size) < 0) + if (H5Pset_file_image(fapl, buf_ptr, buf_size) < 0) goto out; - /* set file open flags */ + /* set file open flags */ if (flags & H5LT_FILE_IMAGE_OPEN_RW) file_open_flags = H5F_ACC_RDWR; else @@ -944,59 +894,57 @@ hid_t H5LTopen_file_image(void *buf_ptr, size_t buf_size, unsigned flags) /* define a unique file name */ HDsnprintf(file_name, (sizeof(file_name) - 1), "file_image_%ld", file_name_counter++); - - /* Assign file image in FAPL to the core file driver */ - if ((file_id = H5Fopen(file_name, file_open_flags, fapl)) < 0) + + /* Assign file image in FAPL to the core file driver */ + if ((file_id = H5Fopen(file_name, file_open_flags, fapl)) < 0) goto out; /* Close FAPL */ - if (H5Pclose(fapl) < 0) + if (H5Pclose(fapl) < 0) goto out; - /* Return file identifier */ - return file_id; + /* Return file identifier */ + return file_id; out: - H5E_BEGIN_TRY { - H5Pclose(fapl); - } H5E_END_TRY; + H5E_BEGIN_TRY { H5Pclose(fapl); } + H5E_END_TRY; return -1; } /* end H5LTopen_file_image() */ - /*------------------------------------------------------------------------- -* Function: H5LT_read_dataset -* -* Purpose: Reads a dataset from disk. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Quincey Koziol, koziol@hdfgroup.org -* -* Date: October 8, 2007 -* -*------------------------------------------------------------------------- -*/ + * Function: H5LT_read_dataset + * + * Purpose: Reads a dataset from disk. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Quincey Koziol + * + * Date: October 8, 2007 + * + *------------------------------------------------------------------------- + */ static herr_t H5LT_read_dataset_numerical(hid_t loc_id, const char *dset_name, hid_t tid, void *data) { - hid_t did; + hid_t did; /* check the arguments */ - if (dset_name == NULL) - return -1; + if (dset_name == NULL) + return -1; /* Open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) return -1; /* Read */ - if(H5Dread(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, data) < 0) + if (H5Dread(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, data) < 0) goto out; /* End access to the dataset and release resources used by it. */ - if(H5Dclose(did)) + if (H5Dclose(did)) return -1; return 0; @@ -1007,508 +955,493 @@ out: } /*------------------------------------------------------------------------- -* Function: H5LTread_dataset -* -* Purpose: Reads a dataset from disk. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: June 13, 2001 -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTread_dataset + * + * Purpose: Reads a dataset from disk. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: June 13, 2001 + * + *------------------------------------------------------------------------- + */ -herr_t H5LTread_dataset(hid_t loc_id, - const char *dset_name, - hid_t tid, - void *data) +herr_t +H5LTread_dataset(hid_t loc_id, const char *dset_name, hid_t tid, void *data) { - return(H5LT_read_dataset_numerical(loc_id, dset_name, tid, data)); + return (H5LT_read_dataset_numerical(loc_id, dset_name, tid, data)); } - /*------------------------------------------------------------------------- -* Function: H5LTread_dataset_char -* -* Purpose: Reads a dataset from disk. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 5, 2001 -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTread_dataset_char + * + * Purpose: Reads a dataset from disk. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: November 5, 2001 + * + *------------------------------------------------------------------------- + */ -herr_t H5LTread_dataset_char( hid_t loc_id, - const char *dset_name, - char *data ) +herr_t +H5LTread_dataset_char(hid_t loc_id, const char *dset_name, char *data) { - return(H5LT_read_dataset_numerical(loc_id, dset_name, H5T_NATIVE_CHAR, data)); + return (H5LT_read_dataset_numerical(loc_id, dset_name, H5T_NATIVE_CHAR, data)); } /*------------------------------------------------------------------------- -* Function: H5LTread_dataset_short -* -* Purpose: Reads a dataset from disk. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 5, 2001 -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTread_dataset_short + * + * Purpose: Reads a dataset from disk. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: November 5, 2001 + * + *------------------------------------------------------------------------- + */ -herr_t H5LTread_dataset_short( hid_t loc_id, - const char *dset_name, - short *data ) +herr_t +H5LTread_dataset_short(hid_t loc_id, const char *dset_name, short *data) { - return(H5LT_read_dataset_numerical(loc_id, dset_name, H5T_NATIVE_SHORT, data)); + return (H5LT_read_dataset_numerical(loc_id, dset_name, H5T_NATIVE_SHORT, data)); } /*------------------------------------------------------------------------- -* Function: H5LTread_dataset_int -* -* Purpose: Reads a dataset from disk. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 5, 2001 -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTread_dataset_int + * + * Purpose: Reads a dataset from disk. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: November 5, 2001 + * + *------------------------------------------------------------------------- + */ -herr_t H5LTread_dataset_int( hid_t loc_id, - const char *dset_name, - int *data ) +herr_t +H5LTread_dataset_int(hid_t loc_id, const char *dset_name, int *data) { - return(H5LT_read_dataset_numerical(loc_id, dset_name, H5T_NATIVE_INT, data)); + return (H5LT_read_dataset_numerical(loc_id, dset_name, H5T_NATIVE_INT, data)); } /*------------------------------------------------------------------------- -* Function: H5LTread_dataset_long -* -* Purpose: Reads a dataset from disk. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 5, 2001 -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTread_dataset_long + * + * Purpose: Reads a dataset from disk. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: November 5, 2001 + * + *------------------------------------------------------------------------- + */ -herr_t H5LTread_dataset_long( hid_t loc_id, - const char *dset_name, - long *data ) +herr_t +H5LTread_dataset_long(hid_t loc_id, const char *dset_name, long *data) { - return(H5LT_read_dataset_numerical(loc_id, dset_name, H5T_NATIVE_LONG, data)); + return (H5LT_read_dataset_numerical(loc_id, dset_name, H5T_NATIVE_LONG, data)); } /*------------------------------------------------------------------------- -* Function: H5LTread_dataset_float -* -* Purpose: Reads a dataset from disk. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 5, 2001 -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTread_dataset_float + * + * Purpose: Reads a dataset from disk. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: November 5, 2001 + * + *------------------------------------------------------------------------- + */ -herr_t H5LTread_dataset_float( hid_t loc_id, - const char *dset_name, - float *data ) +herr_t +H5LTread_dataset_float(hid_t loc_id, const char *dset_name, float *data) { - return(H5LT_read_dataset_numerical(loc_id, dset_name, H5T_NATIVE_FLOAT, data)); + return (H5LT_read_dataset_numerical(loc_id, dset_name, H5T_NATIVE_FLOAT, data)); } - /*------------------------------------------------------------------------- -* Function: H5LTread_dataset_double -* -* Purpose: Reads a dataset from disk. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 5, 2001 -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTread_dataset_double + * + * Purpose: Reads a dataset from disk. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: November 5, 2001 + * + *------------------------------------------------------------------------- + */ -herr_t H5LTread_dataset_double( hid_t loc_id, - const char *dset_name, - double *data ) +herr_t +H5LTread_dataset_double(hid_t loc_id, const char *dset_name, double *data) { - return(H5LT_read_dataset_numerical(loc_id, dset_name, H5T_NATIVE_DOUBLE, data)); + return (H5LT_read_dataset_numerical(loc_id, dset_name, H5T_NATIVE_DOUBLE, data)); } - /*------------------------------------------------------------------------- -* Function: H5LTread_dataset_string -* -* Purpose: Reads a dataset -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: October 05, 2004 -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTread_dataset_string + * + * Purpose: Reads a dataset + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: October 05, 2004 + * + *------------------------------------------------------------------------- + */ -herr_t H5LTread_dataset_string( hid_t loc_id, - const char *dset_name, - char *buf ) +herr_t +H5LTread_dataset_string(hid_t loc_id, const char *dset_name, char *buf) { - hid_t did = -1; - hid_t tid = -1; + hid_t did = -1; + hid_t tid = -1; /* check the arguments */ - if (dset_name == NULL) - return -1; + if (dset_name == NULL) + return -1; /* Open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) return -1; - if((tid = H5Dget_type(did)) < 0) + if ((tid = H5Dget_type(did)) < 0) goto out; /* Read */ - if(H5Dread(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) + if (H5Dread(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) goto out; /* close */ - if(H5Dclose(did)) + if (H5Dclose(did)) goto out; - if(H5Tclose(tid)) + if (H5Tclose(tid)) return -1; return 0; out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Dclose(did); H5Tclose(tid); - } H5E_END_TRY; + } + H5E_END_TRY; return -1; } - /*------------------------------------------------------------------------- -* Function: H5LTget_dataset_ndims -* -* Purpose: Gets the dimensionality of a dataset. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 4, 2001 -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTget_dataset_ndims + * + * Purpose: Gets the dimensionality of a dataset. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 4, 2001 + * + *------------------------------------------------------------------------- + */ -herr_t H5LTget_dataset_ndims( hid_t loc_id, - const char *dset_name, - int *rank ) +herr_t +H5LTget_dataset_ndims(hid_t loc_id, const char *dset_name, int *rank) { - hid_t did = -1; - hid_t sid = -1; + hid_t did = -1; + hid_t sid = -1; /* check the arguments */ - if (dset_name == NULL) - return -1; + if (dset_name == NULL) + return -1; /* Open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) return -1; /* Get the dataspace handle */ - if((sid = H5Dget_space(did)) < 0) + if ((sid = H5Dget_space(did)) < 0) goto out; /* Get rank */ - if((*rank = H5Sget_simple_extent_ndims(sid)) < 0) + if ((*rank = H5Sget_simple_extent_ndims(sid)) < 0) goto out; /* Terminate access to the dataspace */ - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; /* End access to the dataset */ - if(H5Dclose(did)) + if (H5Dclose(did)) return -1; return 0; out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Dclose(did); H5Sclose(sid); - } H5E_END_TRY; + } + H5E_END_TRY; return -1; } - /*------------------------------------------------------------------------- -* Function: H5LTget_dataset_info -* -* Purpose: Gets information about a dataset. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 4, 2001 -* Modified: February 28, 2006: checked for NULL parameters -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTget_dataset_info + * + * Purpose: Gets information about a dataset. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 4, 2001 + * Modified: February 28, 2006: checked for NULL parameters + * + *------------------------------------------------------------------------- + */ -herr_t H5LTget_dataset_info( hid_t loc_id, - const char *dset_name, - hsize_t *dims, - H5T_class_t *type_class, - size_t *type_size ) +herr_t +H5LTget_dataset_info(hid_t loc_id, const char *dset_name, hsize_t *dims, H5T_class_t *type_class, + size_t *type_size) { - hid_t did = -1; - hid_t tid = -1; - hid_t sid = -1; + hid_t did = -1; + hid_t tid = -1; + hid_t sid = -1; /* check the arguments */ - if (dset_name == NULL) - return -1; + if (dset_name == NULL) + return -1; /* open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) return -1; /* get an identifier for the datatype. */ tid = H5Dget_type(did); /* get the class. */ - if(type_class != NULL) + if (type_class != NULL) *type_class = H5Tget_class(tid); /* get the size. */ - if(type_size!=NULL) + if (type_size != NULL) *type_size = H5Tget_size(tid); - if(dims != NULL) { + if (dims != NULL) { /* get the dataspace handle */ - if((sid = H5Dget_space(did)) < 0) + if ((sid = H5Dget_space(did)) < 0) goto out; /* get dimensions */ - if(H5Sget_simple_extent_dims(sid, dims, NULL) < 0) + if (H5Sget_simple_extent_dims(sid, dims, NULL) < 0) goto out; /* terminate access to the dataspace */ - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; } /* end if */ /* release the datatype. */ - if(H5Tclose(tid)) + if (H5Tclose(tid)) return -1; /* end access to the dataset */ - if(H5Dclose(did)) + if (H5Dclose(did)) return -1; return 0; out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Tclose(tid); H5Sclose(sid); H5Dclose(did); - } H5E_END_TRY; + } + H5E_END_TRY; return -1; - } /*------------------------------------------------------------------------- -* Function: find_dataset -* -* Purpose: operator function used by H5LTfind_dataset -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: June 21, 2001 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ + * Function: find_dataset + * + * Purpose: operator function used by H5LTfind_dataset + * + * Programmer: Pedro Vicente + * + * Date: June 21, 2001 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ static herr_t find_dataset(hid_t loc_id, const char *name, const H5L_info_t *linfo, void *op_data) { /* Define a default zero value for return. This will cause the iterator to continue if - * the dataset is not found yet. - */ + * the dataset is not found yet. + */ int ret = 0; /* check the arguments */ - if (name == NULL) - return ret; - + if (name == NULL) + return ret; + /* Shut the compiler up */ loc_id = loc_id; - linfo = linfo; + linfo = linfo; /* Define a positive value for return value if the dataset was found. This will - * cause the iterator to immediately return that positive value, - * indicating short-circuit success - */ - if(HDstrncmp(name, (char *)op_data, HDstrlen((char *)op_data)) == 0) + * cause the iterator to immediately return that positive value, + * indicating short-circuit success + */ + if (HDstrncmp(name, (char *)op_data, HDstrlen((char *)op_data)) == 0) ret = 1; return ret; } - /*------------------------------------------------------------------------- -* Function: H5LTfind_dataset -* -* Purpose: Inquires if a dataset named dset_name exists attached -* to the object loc_id. -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: July 15, 2001 -* -* Return: -* Success: The return value of the first operator that -* returns non-zero, or zero if all members were -* processed with no operator returning non-zero. -* -* Failure: Negative if something goes wrong within the -* library, or the negative value returned by one -* of the operators. -* -*------------------------------------------------------------------------- -*/ - + * Function: H5LTfind_dataset + * + * Purpose: Inquires if a dataset named dset_name exists attached + * to the object loc_id. + * + * Programmer: Pedro Vicente + * + * Date: July 15, 2001 + * + * Return: + * Success: The return value of the first operator that + * returns non-zero, or zero if all members were + * processed with no operator returning non-zero. + * + * Failure: Negative if something goes wrong within the + * library, or the negative value returned by one + * of the operators. + * + *------------------------------------------------------------------------- + */ + +H5_GCC_DIAG_OFF("cast-qual") herr_t -H5LTfind_dataset( hid_t loc_id, const char *dset_name ) +H5LTfind_dataset(hid_t loc_id, const char *dset_name) { return H5Literate(loc_id, H5_INDEX_NAME, H5_ITER_INC, 0, find_dataset, (void *)dset_name); } +H5_GCC_DIAG_ON("cast-qual") + +/*------------------------------------------------------------------------- + * + * Set attribute functions + * + *------------------------------------------------------------------------- + */ + +/*------------------------------------------------------------------------- + * Function: H5LTset_attribute_string + * + * Purpose: Creates and writes a string attribute named attr_name and attaches + * it to the object specified by the name obj_name. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: July 23, 2001 + * + * Comments: If the attribute already exists, it is overwritten + * + * Modifications: + * + *------------------------------------------------------------------------- + */ - -/*------------------------------------------------------------------------- -* -* Set attribute functions -* -*------------------------------------------------------------------------- -*/ - - -/*------------------------------------------------------------------------- -* Function: H5LTset_attribute_string -* -* Purpose: Creates and writes a string attribute named attr_name and attaches -* it to the object specified by the name obj_name. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: July 23, 2001 -* -* Comments: If the attribute already exists, it is overwritten -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - -herr_t H5LTset_attribute_string( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const char *attr_data ) +herr_t +H5LTset_attribute_string(hid_t loc_id, const char *obj_name, const char *attr_name, const char *attr_data) { - hid_t attr_type; - hid_t attr_space_id; - hid_t attr_id; - hid_t obj_id; - int has_attr; - size_t attr_size; + hid_t attr_type; + hid_t attr_space_id; + hid_t attr_id; + hid_t obj_id; + int has_attr; + size_t attr_size; /* check the arguments */ - if (obj_name == NULL) - return -1; - if (attr_name == NULL) - return -1; - if (attr_data == NULL) - return -1; + if (obj_name == NULL) + return -1; + if (attr_name == NULL) + return -1; + if (attr_data == NULL) + return -1; /* Open the object */ if ((obj_id = H5Oopen(loc_id, obj_name, H5P_DEFAULT)) < 0) return -1; /* Create the attribute */ - if ( (attr_type = H5Tcopy( H5T_C_S1 )) < 0 ) + if ((attr_type = H5Tcopy(H5T_C_S1)) < 0) goto out; - attr_size = HDstrlen( attr_data ) + 1; /* extra null term */ + attr_size = HDstrlen(attr_data) + 1; /* extra null term */ - if ( H5Tset_size( attr_type, (size_t)attr_size) < 0 ) + if (H5Tset_size(attr_type, (size_t)attr_size) < 0) goto out; - if ( H5Tset_strpad( attr_type, H5T_STR_NULLTERM ) < 0 ) + if (H5Tset_strpad(attr_type, H5T_STR_NULLTERM) < 0) goto out; - if ( (attr_space_id = H5Screate( H5S_SCALAR )) < 0 ) + if ((attr_space_id = H5Screate(H5S_SCALAR)) < 0) goto out; /* Verify if the attribute already exists */ has_attr = H5LT_find_attribute(obj_id, attr_name); /* The attribute already exists, delete it */ - if(has_attr == 1) - if(H5Adelete(obj_id, attr_name) < 0) + if (has_attr == 1) + if (H5Adelete(obj_id, attr_name) < 0) goto out; /* Create and write the attribute */ - if((attr_id = H5Acreate2(obj_id, attr_name, attr_type, attr_space_id, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((attr_id = H5Acreate2(obj_id, attr_name, attr_type, attr_space_id, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; - if(H5Awrite(attr_id, attr_type, attr_data) < 0) + if (H5Awrite(attr_id, attr_type, attr_data) < 0) goto out; - if(H5Aclose(attr_id) < 0) + if (H5Aclose(attr_id) < 0) goto out; - if(H5Sclose(attr_space_id) < 0) + if (H5Sclose(attr_space_id) < 0) goto out; - if(H5Tclose(attr_type) < 0) + if (H5Tclose(attr_type) < 0) goto out; /* Close the object */ - if(H5Oclose(obj_id) < 0) + if (H5Oclose(obj_id) < 0) return -1; return 0; @@ -1519,79 +1452,71 @@ out: return -1; } - - - - /*------------------------------------------------------------------------- -* Function: H5LT_set_attribute_numerical -* -* Purpose: Private function used by H5LTset_attribute_int and H5LTset_attribute_float -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: July 25, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ - + * Function: H5LT_set_attribute_numerical + * + * Purpose: Private function used by H5LTset_attribute_int and H5LTset_attribute_float + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: July 25, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ -herr_t H5LT_set_attribute_numerical( hid_t loc_id, - const char *obj_name, - const char *attr_name, - size_t size, - hid_t tid, - const void *data ) +herr_t +H5LT_set_attribute_numerical(hid_t loc_id, const char *obj_name, const char *attr_name, size_t size, + hid_t tid, const void *data) { - hid_t obj_id, sid, attr_id; - hsize_t dim_size=size; - int has_attr; + hid_t obj_id, sid, attr_id; + hsize_t dim_size = size; + int has_attr; /* check the arguments */ - if (obj_name == NULL) - return -1; - if (attr_name == NULL) - return -1; + if (obj_name == NULL) + return -1; + if (attr_name == NULL) + return -1; /* Open the object */ if ((obj_id = H5Oopen(loc_id, obj_name, H5P_DEFAULT)) < 0) return -1; /* Create the data space for the attribute. */ - if ( (sid = H5Screate_simple( 1, &dim_size, NULL )) < 0 ) + if ((sid = H5Screate_simple(1, &dim_size, NULL)) < 0) goto out; /* Verify if the attribute already exists */ has_attr = H5LT_find_attribute(obj_id, attr_name); /* The attribute already exists, delete it */ - if(has_attr == 1) - if(H5Adelete(obj_id, attr_name) < 0) + if (has_attr == 1) + if (H5Adelete(obj_id, attr_name) < 0) goto out; /* Create the attribute. */ - if((attr_id = H5Acreate2(obj_id, attr_name, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((attr_id = H5Acreate2(obj_id, attr_name, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; /* Write the attribute data. */ - if(H5Awrite(attr_id, tid, data) < 0) + if (H5Awrite(attr_id, tid, data) < 0) goto out; /* Close the attribute. */ - if(H5Aclose(attr_id) < 0) + if (H5Aclose(attr_id) < 0) goto out; /* Close the dataspace. */ - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; /* Close the object */ - if(H5Oclose(obj_id) < 0) + if (H5Oclose(obj_id) < 0) return -1; return 0; @@ -1601,557 +1526,495 @@ out: return -1; } - /*------------------------------------------------------------------------- -* Function: H5LTset_attribute_char -* -* Purpose: Create and write an attribute. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 7, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTset_attribute_char + * + * Purpose: Create and write an attribute. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: November 7, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ -herr_t H5LTset_attribute_char( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const char *data, - size_t size ) +herr_t +H5LTset_attribute_char(hid_t loc_id, const char *obj_name, const char *attr_name, const char *data, + size_t size) { - if ( H5LT_set_attribute_numerical( loc_id, obj_name, attr_name, size, - H5T_NATIVE_CHAR, data ) < 0 ) + if (H5LT_set_attribute_numerical(loc_id, obj_name, attr_name, size, H5T_NATIVE_CHAR, data) < 0) return -1; return 0; } /*------------------------------------------------------------------------- -* Function: H5LTset_attribute_uchar -* -* Purpose: Create and write an attribute. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: March 8, 2004 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTset_attribute_uchar + * + * Purpose: Create and write an attribute. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: March 8, 2004 + * + * Comments: + * + *------------------------------------------------------------------------- + */ -herr_t H5LTset_attribute_uchar( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const unsigned char *data, - size_t size ) +herr_t +H5LTset_attribute_uchar(hid_t loc_id, const char *obj_name, const char *attr_name, const unsigned char *data, + size_t size) { - if ( H5LT_set_attribute_numerical( loc_id, obj_name, attr_name, size, - H5T_NATIVE_UCHAR, data ) < 0 ) + if (H5LT_set_attribute_numerical(loc_id, obj_name, attr_name, size, H5T_NATIVE_UCHAR, data) < 0) return -1; return 0; - } /*------------------------------------------------------------------------- -* Function: H5LTset_attribute_short -* -* Purpose: Create and write an attribute. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 7, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTset_attribute_short + * + * Purpose: Create and write an attribute. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: November 7, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ -herr_t H5LTset_attribute_short( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const short *data, - size_t size ) +herr_t +H5LTset_attribute_short(hid_t loc_id, const char *obj_name, const char *attr_name, const short *data, + size_t size) { - if ( H5LT_set_attribute_numerical( loc_id, obj_name, attr_name, size, - H5T_NATIVE_SHORT, data ) < 0 ) + if (H5LT_set_attribute_numerical(loc_id, obj_name, attr_name, size, H5T_NATIVE_SHORT, data) < 0) return -1; return 0; - } /*------------------------------------------------------------------------- -* Function: H5LTset_attribute_ushort -* -* Purpose: Create and write an attribute. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: March 8, 2004 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTset_attribute_ushort + * + * Purpose: Create and write an attribute. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: March 8, 2004 + * + * Comments: + * + *------------------------------------------------------------------------- + */ -herr_t H5LTset_attribute_ushort( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const unsigned short *data, - size_t size ) +herr_t +H5LTset_attribute_ushort(hid_t loc_id, const char *obj_name, const char *attr_name, + const unsigned short *data, size_t size) { - if ( H5LT_set_attribute_numerical( loc_id, obj_name, attr_name, size, - H5T_NATIVE_USHORT, data ) < 0 ) + if (H5LT_set_attribute_numerical(loc_id, obj_name, attr_name, size, H5T_NATIVE_USHORT, data) < 0) return -1; return 0; - } /*------------------------------------------------------------------------- -* Function: H5LTset_attribute_int -* -* Purpose: Create and write an attribute. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 7, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTset_attribute_int + * + * Purpose: Create and write an attribute. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: November 7, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ -herr_t H5LTset_attribute_int( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const int *data, - size_t size ) +herr_t +H5LTset_attribute_int(hid_t loc_id, const char *obj_name, const char *attr_name, const int *data, size_t size) { - if ( H5LT_set_attribute_numerical( loc_id, obj_name, attr_name, size, - H5T_NATIVE_INT, data ) < 0 ) + if (H5LT_set_attribute_numerical(loc_id, obj_name, attr_name, size, H5T_NATIVE_INT, data) < 0) return -1; return 0; - } /*------------------------------------------------------------------------- -* Function: H5LTset_attribute_uint -* -* Purpose: Create and write an attribute. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: March 8, 2004 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTset_attribute_uint + * + * Purpose: Create and write an attribute. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: March 8, 2004 + * + * Comments: + * + *------------------------------------------------------------------------- + */ -herr_t H5LTset_attribute_uint( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const unsigned int *data, - size_t size ) +herr_t +H5LTset_attribute_uint(hid_t loc_id, const char *obj_name, const char *attr_name, const unsigned int *data, + size_t size) { - if ( H5LT_set_attribute_numerical( loc_id, obj_name, attr_name, size, - H5T_NATIVE_UINT, data ) < 0 ) + if (H5LT_set_attribute_numerical(loc_id, obj_name, attr_name, size, H5T_NATIVE_UINT, data) < 0) return -1; return 0; - } - /*------------------------------------------------------------------------- -* Function: H5LTset_attribute_long -* -* Purpose: Create and write an attribute. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 7, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTset_attribute_long + * + * Purpose: Create and write an attribute. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: November 7, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ -herr_t H5LTset_attribute_long( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const long *data, - size_t size ) +herr_t +H5LTset_attribute_long(hid_t loc_id, const char *obj_name, const char *attr_name, const long *data, + size_t size) { - if ( H5LT_set_attribute_numerical( loc_id, obj_name, attr_name, size, - H5T_NATIVE_LONG, data ) < 0 ) + if (H5LT_set_attribute_numerical(loc_id, obj_name, attr_name, size, H5T_NATIVE_LONG, data) < 0) return -1; return 0; - } /*------------------------------------------------------------------------- -* Function: H5LTset_attribute_long_long -* -* Purpose: Create and write an attribute. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Elena Pourmal, epourmal@ncsa.uiuc.edu -* -* Date: June 17, 2005 -* -* Comments: This function was added to support attributes of type long long -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTset_attribute_long_long + * + * Purpose: Create and write an attribute. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Elena Pourmal + * + * Date: June 17, 2005 + * + * Comments: This function was added to support attributes of type long long + * + *------------------------------------------------------------------------- + */ -herr_t H5LTset_attribute_long_long( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const long long *data, - size_t size ) +herr_t +H5LTset_attribute_long_long(hid_t loc_id, const char *obj_name, const char *attr_name, const long long *data, + size_t size) { - if ( H5LT_set_attribute_numerical( loc_id, obj_name, attr_name, size, - H5T_NATIVE_LLONG, data ) < 0 ) + if (H5LT_set_attribute_numerical(loc_id, obj_name, attr_name, size, H5T_NATIVE_LLONG, data) < 0) return -1; return 0; - } - /*------------------------------------------------------------------------- -* Function: H5LTset_attribute_ulong -* -* Purpose: Create and write an attribute. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: March 8, 2004 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTset_attribute_ulong + * + * Purpose: Create and write an attribute. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: March 8, 2004 + * + * Comments: + * + *------------------------------------------------------------------------- + */ -herr_t H5LTset_attribute_ulong( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const unsigned long *data, - size_t size ) +herr_t +H5LTset_attribute_ulong(hid_t loc_id, const char *obj_name, const char *attr_name, const unsigned long *data, + size_t size) { - if ( H5LT_set_attribute_numerical( loc_id, obj_name, attr_name, size, - H5T_NATIVE_ULONG, data ) < 0 ) + if (H5LT_set_attribute_numerical(loc_id, obj_name, attr_name, size, H5T_NATIVE_ULONG, data) < 0) return -1; return 0; - } - /*------------------------------------------------------------------------- -* Function: H5LTset_attribute_float -* -* Purpose: Create and write an attribute. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: July 25, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ - + * Function: H5LTset_attribute_float + * + * Purpose: Create and write an attribute. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: July 25, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ -herr_t H5LTset_attribute_float( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const float *data, - size_t size ) +herr_t +H5LTset_attribute_float(hid_t loc_id, const char *obj_name, const char *attr_name, const float *data, + size_t size) { - if ( H5LT_set_attribute_numerical( loc_id, obj_name, attr_name, size, - H5T_NATIVE_FLOAT, data ) < 0 ) + if (H5LT_set_attribute_numerical(loc_id, obj_name, attr_name, size, H5T_NATIVE_FLOAT, data) < 0) return -1; return 0; - } - /*------------------------------------------------------------------------- -* Function: H5LTset_attribute_double -* -* Purpose: Create and write an attribute. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 7, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTset_attribute_double + * + * Purpose: Create and write an attribute. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: November 7, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ -herr_t H5LTset_attribute_double( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const double *data, - size_t size ) +herr_t +H5LTset_attribute_double(hid_t loc_id, const char *obj_name, const char *attr_name, const double *data, + size_t size) { - if ( H5LT_set_attribute_numerical( loc_id, obj_name, attr_name, size, - H5T_NATIVE_DOUBLE, data ) < 0 ) + if (H5LT_set_attribute_numerical(loc_id, obj_name, attr_name, size, H5T_NATIVE_DOUBLE, data) < 0) return -1; return 0; - } - - /*------------------------------------------------------------------------- -* Function: find_attr -* -* Purpose: operator function used by H5LT_find_attribute -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: June 21, 2001 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ + * Function: find_attr + * + * Purpose: operator function used by H5LT_find_attribute + * + * Programmer: Pedro Vicente + * + * Date: June 21, 2001 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ static herr_t -find_attr(hid_t loc_id, const char *name, const H5A_info_t *ainfo, - void *op_data) +find_attr(hid_t loc_id, const char *name, const H5A_info_t *ainfo, void *op_data) { int ret = H5_ITER_CONT; /* check the arguments */ - if (name == NULL) - return H5_ITER_CONT; + if (name == NULL) + return H5_ITER_CONT; /* Shut compiler up */ - loc_id = loc_id; ainfo = ainfo; + loc_id = loc_id; + ainfo = ainfo; /* Define a positive value for return value if the attribute was found. This will - * cause the iterator to immediately return that positive value, - * indicating short-circuit success - */ + * cause the iterator to immediately return that positive value, + * indicating short-circuit success + */ - if(HDstrncmp(name, (char *)op_data, MAX(HDstrlen((char *)op_data),HDstrlen(name))) == 0) + if (HDstrncmp(name, (char *)op_data, MAX(HDstrlen((char *)op_data), HDstrlen(name))) == 0) ret = H5_ITER_STOP; return ret; } - /*------------------------------------------------------------------------- -* Function: H5LTfind_attribute -* -* Purpose: Inquires if an attribute named attr_name exists attached to -* the object loc_id. -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: May 17, 2006 -* -* Comments: -* Calls the private version of the function -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTfind_attribute + * + * Purpose: Inquires if an attribute named attr_name exists attached to + * the object loc_id. + * + * Programmer: Pedro Vicente + * + * Date: May 17, 2006 + * + * Comments: + * Calls the private version of the function + * + *------------------------------------------------------------------------- + */ -herr_t H5LTfind_attribute( hid_t loc_id, const char* attr_name ) +herr_t +H5LTfind_attribute(hid_t loc_id, const char *attr_name) { - return H5LT_find_attribute(loc_id,attr_name); + return H5LT_find_attribute(loc_id, attr_name); } - - /*------------------------------------------------------------------------- -* Function: H5LT_find_attribute -* -* Purpose: Inquires if an attribute named attr_name exists attached to the object loc_id. -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: June 21, 2001 -* -* Comments: -* The function uses H5Aiterate2 with the operator function find_attr -* -* Return: -* Success: The return value of the first operator that -* returns non-zero, or zero if all members were -* processed with no operator returning non-zero. -* -* Failure: Negative if something goes wrong within the -* library, or the negative value returned by one -* of the operators. -* -*------------------------------------------------------------------------- -*/ - + * Function: H5LT_find_attribute + * + * Purpose: Inquires if an attribute named attr_name exists attached to the object loc_id. + * + * Programmer: Pedro Vicente + * + * Date: June 21, 2001 + * + * Comments: + * The function uses H5Aiterate2 with the operator function find_attr + * + * Return: + * Success: The return value of the first operator that + * returns non-zero, or zero if all members were + * processed with no operator returning non-zero. + * + * Failure: Negative if something goes wrong within the + * library, or the negative value returned by one + * of the operators. + * + *------------------------------------------------------------------------- + */ + +H5_GCC_DIAG_OFF("cast-qual") herr_t -H5LT_find_attribute( hid_t loc_id, const char* attr_name ) +H5LT_find_attribute(hid_t loc_id, const char *attr_name) { return H5Aiterate2(loc_id, H5_INDEX_NAME, H5_ITER_INC, NULL, find_attr, (void *)attr_name); } +H5_GCC_DIAG_ON("cast-qual") + +/*------------------------------------------------------------------------- + * Function: H5LTget_attribute_ndims + * + * Purpose: Gets the dimensionality of an attribute. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 4, 2001 + * + *------------------------------------------------------------------------- + */ - - -/*------------------------------------------------------------------------- -* Function: H5LTget_attribute_ndims -* -* Purpose: Gets the dimensionality of an attribute. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 4, 2001 -* -*------------------------------------------------------------------------- -*/ - -herr_t H5LTget_attribute_ndims( hid_t loc_id, - const char *obj_name, - const char *attr_name, - int *rank ) +herr_t +H5LTget_attribute_ndims(hid_t loc_id, const char *obj_name, const char *attr_name, int *rank) { - hid_t attr_id; - hid_t sid; - hid_t obj_id; + hid_t attr_id; + hid_t sid; + hid_t obj_id; /* check the arguments */ - if (obj_name == NULL) - return -1; - if (attr_name == NULL) - return -1; + if (obj_name == NULL) + return -1; + if (attr_name == NULL) + return -1; /* Open the object */ - if((obj_id = H5Oopen(loc_id, obj_name, H5P_DEFAULT)) < 0) + if ((obj_id = H5Oopen(loc_id, obj_name, H5P_DEFAULT)) < 0) return -1; /* Open the attribute. */ - if((attr_id = H5Aopen(obj_id, attr_name, H5P_DEFAULT)) < 0) - { + if ((attr_id = H5Aopen(obj_id, attr_name, H5P_DEFAULT)) < 0) { H5Oclose(obj_id); return -1; } /* Get the dataspace handle */ - if((sid = H5Aget_space(attr_id)) < 0) + if ((sid = H5Aget_space(attr_id)) < 0) goto out; /* Get rank */ - if((*rank = H5Sget_simple_extent_ndims(sid)) < 0) + if ((*rank = H5Sget_simple_extent_ndims(sid)) < 0) goto out; /* Terminate access to the attribute */ - if ( H5Sclose( sid ) < 0 ) + if (H5Sclose(sid) < 0) goto out; /* End access to the attribute */ - if ( H5Aclose( attr_id ) ) - goto out;; + if (H5Aclose(attr_id)) + goto out; + ; /* Close the object */ - if(H5Oclose(obj_id) < 0 ) + if (H5Oclose(obj_id) < 0) return -1; return 0; out: - H5Aclose( attr_id ); + H5Aclose(attr_id); H5Oclose(obj_id); return -1; - } - /*------------------------------------------------------------------------- -* Function: H5LTget_attribute_info -* -* Purpose: Gets information about an attribute. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 4, 2001 -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTget_attribute_info + * + * Purpose: Gets information about an attribute. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 4, 2001 + * + *------------------------------------------------------------------------- + */ -herr_t H5LTget_attribute_info( hid_t loc_id, - const char *obj_name, - const char *attr_name, - hsize_t *dims, - H5T_class_t *type_class, - size_t *type_size ) +herr_t +H5LTget_attribute_info(hid_t loc_id, const char *obj_name, const char *attr_name, hsize_t *dims, + H5T_class_t *type_class, size_t *type_size) { - hid_t attr_id; - hid_t tid; - hid_t sid; - hid_t obj_id; + hid_t attr_id; + hid_t tid; + hid_t sid; + hid_t obj_id; /* check the arguments */ - if (obj_name == NULL) - return -1; - if (attr_name == NULL) - return -1; + if (obj_name == NULL) + return -1; + if (attr_name == NULL) + return -1; /* Open the object */ - if((obj_id = H5Oopen(loc_id, obj_name, H5P_DEFAULT)) < 0) + if ((obj_id = H5Oopen(loc_id, obj_name, H5P_DEFAULT)) < 0) return -1; /* Open the attribute. */ - if((attr_id = H5Aopen(obj_id, attr_name, H5P_DEFAULT)) < 0) - { + if ((attr_id = H5Aopen(obj_id, attr_name, H5P_DEFAULT)) < 0) { H5Oclose(obj_id); return -1; } @@ -2163,30 +2026,30 @@ herr_t H5LTget_attribute_info( hid_t loc_id, *type_class = H5Tget_class(tid); /* Get the size. */ - *type_size = H5Tget_size( tid ); + *type_size = H5Tget_size(tid); /* Get the dataspace handle */ - if ( (sid = H5Aget_space( attr_id )) < 0 ) + if ((sid = H5Aget_space(attr_id)) < 0) goto out; /* Get dimensions */ - if ( H5Sget_simple_extent_dims( sid, dims, NULL) < 0 ) + if (H5Sget_simple_extent_dims(sid, dims, NULL) < 0) goto out; /* Terminate access to the dataspace */ - if ( H5Sclose( sid ) < 0 ) + if (H5Sclose(sid) < 0) goto out; /* Release the datatype. */ - if ( H5Tclose( tid ) ) + if (H5Tclose(tid)) goto out; /* End access to the attribute */ - if ( H5Aclose( attr_id ) ) + if (H5Aclose(attr_id)) goto out; /* Close the object */ - if(H5Oclose(obj_id) < 0 ) + if (H5Oclose(obj_id) < 0) return -1; return 0; @@ -2196,46 +2059,46 @@ out: H5Aclose(attr_id); H5Oclose(obj_id); return -1; - } /*------------------------------------------------------------------------- -* Function: H5LTtext_to_dtype -* -* Purpose: Convert DDL description to HDF5 data type. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Raymond Lu, slu@ncsa.uiuc.edu -* -* Date: October 6, 2004 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -hid_t H5LTtext_to_dtype(const char *text, H5LT_lang_t lang_type) -{ - hid_t type_id; + * Function: H5LTtext_to_dtype + * + * Purpose: Convert DDL description to HDF5 data type. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Raymond Lu + * + * Date: October 6, 2004 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +hid_t +H5LTtext_to_dtype(const char *text, H5LT_lang_t lang_type) +{ + hid_t type_id; /* check the arguments */ - if (text == NULL) - return -1; + if (text == NULL) + return -1; - if(lang_type <= H5LT_LANG_ERR || lang_type >= H5LT_NO_LANG) + if (lang_type <= H5LT_LANG_ERR || lang_type >= H5LT_NO_LANG) goto out; - if(lang_type != H5LT_DDL) { + if (lang_type != H5LT_DDL) { HDfprintf(stderr, "only DDL is supported for now.\n"); goto out; } input_len = HDstrlen(text); - myinput = HDstrdup(text); + myinput = HDstrdup(text); - if((type_id = H5LTyyparse()) < 0) { + if ((type_id = H5LTyyparse()) < 0) { HDfree(myinput); goto out; } @@ -2250,57 +2113,60 @@ out: } /*------------------------------------------------------------------------- -* Function: realloc_and_append -* -* Purpose: Expand the buffer and append a string to it. -* -* Return: void -* -* Programmer: Raymond Lu, songyulu@hdfgroup.org -* -* Date: 29 September 2011 -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -static char* + * Function: realloc_and_append + * + * Purpose: Expand the buffer and append a string to it. + * + * Return: void + * + * Programmer: Raymond Lu + * + * Date: 29 September 2011 + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +static char * realloc_and_append(hbool_t _no_user_buf, size_t *len, char *buf, char *str_to_add) { size_t size_str_to_add, size_str; - if(_no_user_buf) { + if (_no_user_buf) { /* If the buffer isn't big enough, reallocate it. Otherwise, go to do strcat. */ - if(str_to_add && ((ssize_t)(*len - (HDstrlen(buf) + HDstrlen(str_to_add) + 1)) < LIMIT)) { + if (str_to_add && ((ssize_t)(*len - (HDstrlen(buf) + HDstrlen(str_to_add) + 1)) < LIMIT)) { *len += ((HDstrlen(buf) + HDstrlen(str_to_add) + 1) / INCREMENT + 1) * INCREMENT; - buf = (char*)HDrealloc(buf, *len); - } else if(!str_to_add && ((ssize_t)(*len - HDstrlen(buf) - 1) < LIMIT)) { + buf = (char *)HDrealloc(buf, *len); + } + else if (!str_to_add && ((ssize_t)(*len - HDstrlen(buf) - 1) < LIMIT)) { *len += INCREMENT; - buf = (char*)HDrealloc(buf, *len); + buf = (char *)HDrealloc(buf, *len); } } - if(!buf) - goto out; - - if(str_to_add) { - /* find the size of the buffer to add */ - size_str_to_add = HDstrlen(str_to_add); - /* find the size of the current buffer */ - size_str = HDstrlen(buf); - - /* Check to make sure the appended string does not - * extend past the allocated buffer; if it does then truncate the string - */ - if(size_str < *len - 1) { - if( size_str + size_str_to_add < *len - 1) { - HDstrncat(buf, str_to_add, size_str_to_add); - } else { - HDstrncat(buf, str_to_add, (*len - 1) - size_str); - } - } else { - buf[*len-1] = '\0'; /* buffer is full, null terminate */ - } + if (!buf) + goto out; + + if (str_to_add) { + /* find the size of the buffer to add */ + size_str_to_add = HDstrlen(str_to_add); + /* find the size of the current buffer */ + size_str = HDstrlen(buf); + + /* Check to make sure the appended string does not + * extend past the allocated buffer; if it does then truncate the string + */ + if (size_str < *len - 1) { + if (size_str + size_str_to_add < *len - 1) { + HDstrncat(buf, str_to_add, size_str_to_add); + } + else { + HDstrncat(buf, str_to_add, (*len - 1) - size_str); + } + } + else { + buf[*len - 1] = '\0'; /* buffer is full, null terminate */ + } } return buf; @@ -2310,32 +2176,33 @@ out: } /*------------------------------------------------------------------------- -* Function: indentation -* -* Purpose: Print spaces for indentation -* -* Return: void -* -* Programmer: Raymond Lu, slu@ncsa.uiuc.edu -* -* Date: December 6, 2005 -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -static char* -indentation(size_t x, char* str, hbool_t no_u_buf, size_t *s_len) -{ - char tmp_str[TMP_LEN]; + * Function: indentation + * + * Purpose: Print spaces for indentation + * + * Return: void + * + * Programmer: Raymond Lu + * + * Date: December 6, 2005 + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +static char * +indentation(size_t x, char *str, hbool_t no_u_buf, size_t *s_len) +{ + char tmp_str[TMP_LEN]; if (x < 80) { HDmemset(tmp_str, ' ', x); - tmp_str[x]='\0'; - } else + tmp_str[x] = '\0'; + } + else HDsnprintf(tmp_str, TMP_LEN, "error: the indentation exceeds the number of cols."); - if(!(str = realloc_and_append(no_u_buf, s_len, str, tmp_str))) + if (!(str = realloc_and_append(no_u_buf, s_len, str, tmp_str))) goto out; return str; @@ -2345,101 +2212,102 @@ out: } /*------------------------------------------------------------------------- -* Function: print_enum -* -* Purpose: prints the enum data -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Raymond Lu -* -* Modifications: -* -*-----------------------------------------------------------------------*/ -static char* -print_enum(hid_t type, char* str, size_t *str_len, hbool_t no_ubuf, size_t indt) + * Function: print_enum + * + * Purpose: prints the enum data + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Raymond Lu + * + * Modifications: + * + *-----------------------------------------------------------------------*/ +static char * +print_enum(hid_t type, char *str, size_t *str_len, hbool_t no_ubuf, size_t indt) { - char **name = NULL; /*member names */ - unsigned char *value = NULL; /*value array */ - unsigned char *copy = NULL; /*a pointer to value array */ - int nmembs; /*number of members */ - char tmp_str[TMP_LEN]; - int nchars; /*number of output characters */ - hid_t super = -1; /*enum base integer type */ - hid_t native = -1; /*native integer data type */ - size_t super_size; /*enum base type size */ - size_t dst_size; /*destination value type size */ - int i; + char ** name = NULL; /*member names */ + unsigned char *value = NULL; /*value array */ + unsigned char *copy = NULL; /*a pointer to value array */ + int nmembs; /*number of members */ + char tmp_str[TMP_LEN]; + int nchars; /*number of output characters */ + hid_t super = -1; /*enum base integer type */ + hid_t native = -1; /*native integer data type */ + size_t super_size; /*enum base type size */ + size_t dst_size; /*destination value type size */ + int i; - if((nmembs = H5Tget_nmembers(type))<=0) + if ((nmembs = H5Tget_nmembers(type)) <= 0) goto out; - if((super = H5Tget_super(type)) < 0) + if ((super = H5Tget_super(type)) < 0) goto out; /* Use buffer of INT or UNSIGNED INT to print enum values because - * we don't expect these values to be so big that INT or UNSIGNED - * INT can't hold. - */ + * we don't expect these values to be so big that INT or UNSIGNED + * INT can't hold. + */ if (H5T_SGN_NONE == H5Tget_sign(super)) { native = H5T_NATIVE_UINT; - } else { + } + else { native = H5T_NATIVE_INT; } super_size = H5Tget_size(super); - dst_size = H5Tget_size(native); + dst_size = H5Tget_size(native); /* Get the names and raw values of all members */ - name = (char**)HDcalloc((size_t)nmembs, sizeof(char *)); - value = (unsigned char*)HDcalloc((size_t)nmembs, MAX(dst_size, super_size)); + name = (char **)HDcalloc((size_t)nmembs, sizeof(char *)); + value = (unsigned char *)HDcalloc((size_t)nmembs, MAX(dst_size, super_size)); for (i = 0; i < nmembs; i++) { - if((name[i] = H5Tget_member_name(type, (unsigned)i))==NULL) + if ((name[i] = H5Tget_member_name(type, (unsigned)i)) == NULL) goto out; - if(H5Tget_member_value(type, (unsigned)i, value + (size_t)i * super_size) < 0) + if (H5Tget_member_value(type, (unsigned)i, value + (size_t)i * super_size) < 0) goto out; } /* Convert values to native data type */ if (native > 0) { - if(H5Tconvert(super, native, (size_t)nmembs, value, NULL, H5P_DEFAULT) < 0) + if (H5Tconvert(super, native, (size_t)nmembs, value, NULL, H5P_DEFAULT) < 0) goto out; } /* - * Sort members by increasing value - * ***not implemented yet*** - */ + * Sort members by increasing value + * ***not implemented yet*** + */ /* Print members */ for (i = 0; i < nmembs; i++) { - if(!(str = indentation(indt + COL, str, no_ubuf, str_len))) + if (!(str = indentation(indt + COL, str, no_ubuf, str_len))) goto out; nchars = HDsnprintf(tmp_str, TMP_LEN, "\"%s\"", name[i]); - if(!(str = realloc_and_append(no_ubuf, str_len, str, tmp_str))) + if (!(str = realloc_and_append(no_ubuf, str_len, str, tmp_str))) goto out; HDsnprintf(tmp_str, TMP_LEN, "%*s ", MAX(0, 16 - nchars), ""); - if(!(str = realloc_and_append(no_ubuf, str_len, str, tmp_str))) + if (!(str = realloc_and_append(no_ubuf, str_len, str, tmp_str))) goto out; /*On SGI Altix(cobalt), wrong values were printed out with "value+i*dst_size" *strangely, unless use another pointer "copy".*/ copy = value + (size_t)i * dst_size; if (H5T_SGN_NONE == H5Tget_sign(native)) - HDsnprintf(tmp_str, TMP_LEN, "%u", *((unsigned int*)((void *)copy))); + HDsnprintf(tmp_str, TMP_LEN, "%u", *((unsigned int *)((void *)copy))); else - HDsnprintf(tmp_str, TMP_LEN, "%d", *((int*)((void *)copy))); - if(!(str = realloc_and_append(no_ubuf, str_len, str, tmp_str))) + HDsnprintf(tmp_str, TMP_LEN, "%d", *((int *)((void *)copy))); + if (!(str = realloc_and_append(no_ubuf, str_len, str, tmp_str))) goto out; HDsnprintf(tmp_str, TMP_LEN, ";\n"); - if(!(str = realloc_and_append(no_ubuf, str_len, str, tmp_str))) + if (!(str = realloc_and_append(no_ubuf, str_len, str, tmp_str))) goto out; } /* Release resources */ - for(i = 0; i < nmembs; i++) + for (i = 0; i < nmembs; i++) H5free_memory(name[i]); HDfree(name); @@ -2450,67 +2318,69 @@ print_enum(hid_t type, char* str, size_t *str_len, hbool_t no_ubuf, size_t indt) out: - if(0 == nmembs) { + if (0 == nmembs) { HDsnprintf(tmp_str, TMP_LEN, "\n%*s <empty>", (int)(indt + 4), ""); str = realloc_and_append(no_ubuf, str_len, str, tmp_str); } /* end if */ /* Release resources */ - if(name) { - for(i = 0; i < nmembs; i++) - if(name[i]) + if (name) { + for (i = 0; i < nmembs; i++) + if (name[i]) HDfree(name[i]); HDfree(name); } /* end if */ - if(value) + if (value) HDfree(value); - if(super >= 0) + if (super >= 0) H5Tclose(super); return NULL; } /*------------------------------------------------------------------------- -* Function: H5LTdtype_to_text -* -* Purpose: Convert HDF5 data type to DDL description. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Raymond Lu, slu@ncsa.uiuc.edu -* -* Date: December 6, 2005 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -herr_t H5LTdtype_to_text(hid_t dtype, char *str, H5LT_lang_t lang_type, size_t *len) + * Function: H5LTdtype_to_text + * + * Purpose: Convert HDF5 data type to DDL description. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Raymond Lu + * + * Date: December 6, 2005 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +herr_t +H5LTdtype_to_text(hid_t dtype, char *str, H5LT_lang_t lang_type, size_t *len) { - size_t str_len = INCREMENT; - char *text_str; - herr_t ret = SUCCEED; + size_t str_len = INCREMENT; + char * text_str; + herr_t ret = SUCCEED; - if(lang_type <= H5LT_LANG_ERR || lang_type >= H5LT_NO_LANG) + if (lang_type <= H5LT_LANG_ERR || lang_type >= H5LT_NO_LANG) goto out; - if(len && !str) { - text_str = (char*)HDcalloc(str_len, sizeof(char)); - text_str[0]='\0'; - if(!(text_str = H5LT_dtype_to_text(dtype, text_str, lang_type, &str_len, 1))) + if (len && !str) { + text_str = (char *)HDcalloc(str_len, sizeof(char)); + text_str[0] = '\0'; + if (!(text_str = H5LT_dtype_to_text(dtype, text_str, lang_type, &str_len, 1))) goto out; *len = HDstrlen(text_str) + 1; - if(text_str) + if (text_str) HDfree(text_str); text_str = NULL; - } else if(len && str) { - if(!(H5LT_dtype_to_text(dtype, str, lang_type, len, 0))) + } + else if (len && str) { + if (!(H5LT_dtype_to_text(dtype, str, lang_type, len, 0))) goto out; - str[*len-1] = '\0'; + str[*len - 1] = '\0'; } return ret; @@ -2520,38 +2390,38 @@ out: } /*------------------------------------------------------------------------- -* Function: H5LT_dtype_to_text -* -* Purpose: Private function to convert HDF5 data type to DDL description. -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Raymond Lu, slu@ncsa.uiuc.edu -* -* Date: December 20, 2005 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -char* H5LT_dtype_to_text(hid_t dtype, char *dt_str, H5LT_lang_t lang, size_t *slen, - hbool_t no_user_buf) + * Function: H5LT_dtype_to_text + * + * Purpose: Private function to convert HDF5 data type to DDL description. + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Raymond Lu + * + * Date: December 20, 2005 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +char * +H5LT_dtype_to_text(hid_t dtype, char *dt_str, H5LT_lang_t lang, size_t *slen, hbool_t no_user_buf) { H5T_class_t tcls; char tmp_str[TMP_LEN]; int i; - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, NULL))) + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, NULL))) goto out; - - if(lang != H5LT_DDL) { + + if (lang != H5LT_DDL) { HDsnprintf(dt_str, *slen, "only DDL is supported for now"); goto out; } - if((tcls = H5Tget_class(dtype)) < 0) + if ((tcls = H5Tget_class(dtype)) < 0) goto out; switch (tcls) { @@ -2559,57 +2429,83 @@ char* H5LT_dtype_to_text(hid_t dtype, char *dt_str, H5LT_lang_t lang, size_t *sl case H5T_BITFIELD: if (H5Tequal(dtype, H5T_STD_I8BE)) { HDsnprintf(dt_str, *slen, "H5T_STD_I8BE"); - } else if (H5Tequal(dtype, H5T_STD_I8LE)) { + } + else if (H5Tequal(dtype, H5T_STD_I8LE)) { HDsnprintf(dt_str, *slen, "H5T_STD_I8LE"); - } else if (H5Tequal(dtype, H5T_STD_I16BE)) { + } + else if (H5Tequal(dtype, H5T_STD_I16BE)) { HDsnprintf(dt_str, *slen, "H5T_STD_I16BE"); - } else if (H5Tequal(dtype, H5T_STD_I16LE)) { + } + else if (H5Tequal(dtype, H5T_STD_I16LE)) { HDsnprintf(dt_str, *slen, "H5T_STD_I16LE"); - } else if (H5Tequal(dtype, H5T_STD_I32BE)) { + } + else if (H5Tequal(dtype, H5T_STD_I32BE)) { HDsnprintf(dt_str, *slen, "H5T_STD_I32BE"); - } else if (H5Tequal(dtype, H5T_STD_I32LE)) { + } + else if (H5Tequal(dtype, H5T_STD_I32LE)) { HDsnprintf(dt_str, *slen, "H5T_STD_I32LE"); - } else if (H5Tequal(dtype, H5T_STD_I64BE)) { + } + else if (H5Tequal(dtype, H5T_STD_I64BE)) { HDsnprintf(dt_str, *slen, "H5T_STD_I64BE"); - } else if (H5Tequal(dtype, H5T_STD_I64LE)) { + } + else if (H5Tequal(dtype, H5T_STD_I64LE)) { HDsnprintf(dt_str, *slen, "H5T_STD_I64LE"); - } else if (H5Tequal(dtype, H5T_STD_U8BE)) { + } + else if (H5Tequal(dtype, H5T_STD_U8BE)) { HDsnprintf(dt_str, *slen, "H5T_STD_U8BE"); - } else if (H5Tequal(dtype, H5T_STD_U8LE)) { + } + else if (H5Tequal(dtype, H5T_STD_U8LE)) { HDsnprintf(dt_str, *slen, "H5T_STD_U8LE"); - } else if (H5Tequal(dtype, H5T_STD_U16BE)) { + } + else if (H5Tequal(dtype, H5T_STD_U16BE)) { HDsnprintf(dt_str, *slen, "H5T_STD_U16BE"); - } else if (H5Tequal(dtype, H5T_STD_U16LE)) { + } + else if (H5Tequal(dtype, H5T_STD_U16LE)) { HDsnprintf(dt_str, *slen, "H5T_STD_U16LE"); - } else if (H5Tequal(dtype, H5T_STD_U32BE)) { + } + else if (H5Tequal(dtype, H5T_STD_U32BE)) { HDsnprintf(dt_str, *slen, "H5T_STD_U32BE"); - } else if (H5Tequal(dtype, H5T_STD_U32LE)) { + } + else if (H5Tequal(dtype, H5T_STD_U32LE)) { HDsnprintf(dt_str, *slen, "H5T_STD_U32LE"); - } else if (H5Tequal(dtype, H5T_STD_U64BE)) { + } + else if (H5Tequal(dtype, H5T_STD_U64BE)) { HDsnprintf(dt_str, *slen, "H5T_STD_U64BE"); - } else if (H5Tequal(dtype, H5T_STD_U64LE)) { + } + else if (H5Tequal(dtype, H5T_STD_U64LE)) { HDsnprintf(dt_str, *slen, "H5T_STD_U64LE"); - } else if (H5Tequal(dtype, H5T_NATIVE_SCHAR)) { + } + else if (H5Tequal(dtype, H5T_NATIVE_SCHAR)) { HDsnprintf(dt_str, *slen, "H5T_NATIVE_SCHAR"); - } else if (H5Tequal(dtype, H5T_NATIVE_UCHAR)) { + } + else if (H5Tequal(dtype, H5T_NATIVE_UCHAR)) { HDsnprintf(dt_str, *slen, "H5T_NATIVE_UCHAR"); - } else if (H5Tequal(dtype, H5T_NATIVE_SHORT)) { + } + else if (H5Tequal(dtype, H5T_NATIVE_SHORT)) { HDsnprintf(dt_str, *slen, "H5T_NATIVE_SHORT"); - } else if (H5Tequal(dtype, H5T_NATIVE_USHORT)) { + } + else if (H5Tequal(dtype, H5T_NATIVE_USHORT)) { HDsnprintf(dt_str, *slen, "H5T_NATIVE_USHORT"); - } else if (H5Tequal(dtype, H5T_NATIVE_INT)) { + } + else if (H5Tequal(dtype, H5T_NATIVE_INT)) { HDsnprintf(dt_str, *slen, "H5T_NATIVE_INT"); - } else if (H5Tequal(dtype, H5T_NATIVE_UINT)) { + } + else if (H5Tequal(dtype, H5T_NATIVE_UINT)) { HDsnprintf(dt_str, *slen, "H5T_NATIVE_UINT"); - } else if (H5Tequal(dtype, H5T_NATIVE_LONG)) { + } + else if (H5Tequal(dtype, H5T_NATIVE_LONG)) { HDsnprintf(dt_str, *slen, "H5T_NATIVE_LONG"); - } else if (H5Tequal(dtype, H5T_NATIVE_ULONG)) { + } + else if (H5Tequal(dtype, H5T_NATIVE_ULONG)) { HDsnprintf(dt_str, *slen, "H5T_NATIVE_ULONG"); - } else if (H5Tequal(dtype, H5T_NATIVE_LLONG)) { + } + else if (H5Tequal(dtype, H5T_NATIVE_LLONG)) { HDsnprintf(dt_str, *slen, "H5T_NATIVE_LLONG"); - } else if (H5Tequal(dtype, H5T_NATIVE_ULLONG)) { + } + else if (H5Tequal(dtype, H5T_NATIVE_ULLONG)) { HDsnprintf(dt_str, *slen, "H5T_NATIVE_ULLONG"); - } else { + } + else { HDsnprintf(dt_str, *slen, "undefined integer"); } @@ -2617,439 +2513,445 @@ char* H5LT_dtype_to_text(hid_t dtype, char *dt_str, H5LT_lang_t lang, size_t *sl case H5T_FLOAT: if (H5Tequal(dtype, H5T_IEEE_F32BE)) { HDsnprintf(dt_str, *slen, "H5T_IEEE_F32BE"); - } else if (H5Tequal(dtype, H5T_IEEE_F32LE)) { + } + else if (H5Tequal(dtype, H5T_IEEE_F32LE)) { HDsnprintf(dt_str, *slen, "H5T_IEEE_F32LE"); - } else if (H5Tequal(dtype, H5T_IEEE_F64BE)) { + } + else if (H5Tequal(dtype, H5T_IEEE_F64BE)) { HDsnprintf(dt_str, *slen, "H5T_IEEE_F64BE"); - } else if (H5Tequal(dtype, H5T_IEEE_F64LE)) { + } + else if (H5Tequal(dtype, H5T_IEEE_F64LE)) { HDsnprintf(dt_str, *slen, "H5T_IEEE_F64LE"); - } else if (H5Tequal(dtype, H5T_NATIVE_FLOAT)) { + } + else if (H5Tequal(dtype, H5T_NATIVE_FLOAT)) { HDsnprintf(dt_str, *slen, "H5T_NATIVE_FLOAT"); - } else if (H5Tequal(dtype, H5T_NATIVE_DOUBLE)) { + } + else if (H5Tequal(dtype, H5T_NATIVE_DOUBLE)) { HDsnprintf(dt_str, *slen, "H5T_NATIVE_DOUBLE"); -#if H5_SIZEOF_LONG_DOUBLE !=0 - } else if (H5Tequal(dtype, H5T_NATIVE_LDOUBLE)) { +#if H5_SIZEOF_LONG_DOUBLE != 0 + } + else if (H5Tequal(dtype, H5T_NATIVE_LDOUBLE)) { HDsnprintf(dt_str, *slen, "H5T_NATIVE_LDOUBLE"); #endif - } else { + } + else { HDsnprintf(dt_str, *slen, "undefined float"); } break; - case H5T_STRING: - { - /* Make a copy of type in memory in case when DTYPE is on disk, the size - * will be bigger than in memory. This makes it easier to compare - * types in memory. */ - hid_t str_type; - H5T_order_t order; - hid_t tmp_type; - size_t size; - H5T_str_t str_pad; - H5T_cset_t cset; - htri_t is_vlstr; - - if((tmp_type = H5Tcopy(dtype)) < 0) - goto out; - if((size = H5Tget_size(tmp_type))==0) - goto out; - if((str_pad = H5Tget_strpad(tmp_type)) < 0) - goto out; - if((cset = H5Tget_cset(tmp_type)) < 0) - goto out; - if((is_vlstr = H5Tis_variable_str(tmp_type)) < 0) - goto out; + case H5T_STRING: { + /* Make a copy of type in memory in case when DTYPE is on disk, the size + * will be bigger than in memory. This makes it easier to compare + * types in memory. */ + hid_t str_type; + H5T_order_t order; + hid_t tmp_type; + size_t size; + H5T_str_t str_pad; + H5T_cset_t cset; + htri_t is_vlstr; + + if ((tmp_type = H5Tcopy(dtype)) < 0) + goto out; + if ((size = H5Tget_size(tmp_type)) == 0) + goto out; + if ((str_pad = H5Tget_strpad(tmp_type)) < 0) + goto out; + if ((cset = H5Tget_cset(tmp_type)) < 0) + goto out; + if ((is_vlstr = H5Tis_variable_str(tmp_type)) < 0) + goto out; - /* Print lead-in */ - HDsnprintf(dt_str, *slen, "H5T_STRING {\n"); - indent += COL; + /* Print lead-in */ + HDsnprintf(dt_str, *slen, "H5T_STRING {\n"); + indent += COL; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) - goto out; + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + goto out; - if(is_vlstr) - HDsnprintf(tmp_str, TMP_LEN, "STRSIZE H5T_VARIABLE;\n"); - else - HDsnprintf(tmp_str, TMP_LEN, "STRSIZE %d;\n", (int)size); + if (is_vlstr) + HDsnprintf(tmp_str, TMP_LEN, "STRSIZE H5T_VARIABLE;\n"); + else + HDsnprintf(tmp_str, TMP_LEN, "STRSIZE %d;\n", (int)size); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) - goto out; + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + goto out; - if (str_pad == H5T_STR_NULLTERM) - HDsnprintf(tmp_str, TMP_LEN, "STRPAD H5T_STR_NULLTERM;\n"); - else if (str_pad == H5T_STR_NULLPAD) - HDsnprintf(tmp_str, TMP_LEN, "STRPAD H5T_STR_NULLPAD;\n"); - else if (str_pad == H5T_STR_SPACEPAD) - HDsnprintf(tmp_str, TMP_LEN, "STRPAD H5T_STR_SPACEPAD;\n"); - else - HDsnprintf(tmp_str, TMP_LEN, "STRPAD H5T_STR_ERROR;\n"); + if (str_pad == H5T_STR_NULLTERM) + HDsnprintf(tmp_str, TMP_LEN, "STRPAD H5T_STR_NULLTERM;\n"); + else if (str_pad == H5T_STR_NULLPAD) + HDsnprintf(tmp_str, TMP_LEN, "STRPAD H5T_STR_NULLPAD;\n"); + else if (str_pad == H5T_STR_SPACEPAD) + HDsnprintf(tmp_str, TMP_LEN, "STRPAD H5T_STR_SPACEPAD;\n"); + else + HDsnprintf(tmp_str, TMP_LEN, "STRPAD H5T_STR_ERROR;\n"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) - goto out; + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + goto out; - if (cset == H5T_CSET_ASCII) - HDsnprintf(tmp_str, TMP_LEN, "CSET H5T_CSET_ASCII;\n"); - else if (cset == H5T_CSET_UTF8) - HDsnprintf(tmp_str, TMP_LEN, "CSET H5T_CSET_UTF8;\n"); - else - HDsnprintf(tmp_str, TMP_LEN, "CSET unknown;\n"); + if (cset == H5T_CSET_ASCII) + HDsnprintf(tmp_str, TMP_LEN, "CSET H5T_CSET_ASCII;\n"); + else if (cset == H5T_CSET_UTF8) + HDsnprintf(tmp_str, TMP_LEN, "CSET H5T_CSET_UTF8;\n"); + else + HDsnprintf(tmp_str, TMP_LEN, "CSET unknown;\n"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; - /* Reproduce a C type string */ - if((str_type = H5Tcopy(H5T_C_S1)) < 0) - goto out; - if(is_vlstr) { - if(H5Tset_size(str_type, H5T_VARIABLE) < 0) - goto out; - } else { - if(H5Tset_size(str_type, size) < 0) - goto out; - } - if(H5Tset_cset(str_type, cset) < 0) + /* Reproduce a C type string */ + if ((str_type = H5Tcopy(H5T_C_S1)) < 0) + goto out; + if (is_vlstr) { + if (H5Tset_size(str_type, H5T_VARIABLE) < 0) goto out; - if(H5Tset_strpad(str_type, str_pad) < 0) + } + else { + if (H5Tset_size(str_type, size) < 0) goto out; + } + if (H5Tset_cset(str_type, cset) < 0) + goto out; + if (H5Tset_strpad(str_type, str_pad) < 0) + goto out; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) - goto out; + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + goto out; - /* Check C variable-length string first. Are the two types equal? */ - if (H5Tequal(tmp_type, str_type)) { - HDsnprintf(tmp_str, TMP_LEN, "CTYPE H5T_C_S1;\n"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; - goto next; - } + /* Check C variable-length string first. Are the two types equal? */ + if (H5Tequal(tmp_type, str_type)) { + HDsnprintf(tmp_str, TMP_LEN, "CTYPE H5T_C_S1;\n"); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; + goto next; + } - /* Change the endianness and see if they're equal. */ - if((order = H5Tget_order(tmp_type)) < 0) + /* Change the endianness and see if they're equal. */ + if ((order = H5Tget_order(tmp_type)) < 0) + goto out; + if (order == H5T_ORDER_LE) { + if (H5Tset_order(str_type, H5T_ORDER_LE) < 0) goto out; - if(order==H5T_ORDER_LE) { - if(H5Tset_order(str_type, H5T_ORDER_LE) < 0) - goto out; - } else if(order==H5T_ORDER_BE) { - if(H5Tset_order(str_type, H5T_ORDER_BE) < 0) - goto out; - } - - if (H5Tequal(tmp_type, str_type)) { - HDsnprintf(tmp_str, TMP_LEN, "CTYPE H5T_C_S1;\n"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; - goto next; - } - - /* If not equal to C variable-length string, check Fortran type. - * Actually H5Tequal can't tell difference between H5T_C_S1 and H5T_FORTRAN_S1!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! */ - if(H5Tclose(str_type) < 0) + } + else if (order == H5T_ORDER_BE) { + if (H5Tset_order(str_type, H5T_ORDER_BE) < 0) goto out; - if((str_type = H5Tcopy(H5T_FORTRAN_S1)) < 0) + } + + if (H5Tequal(tmp_type, str_type)) { + HDsnprintf(tmp_str, TMP_LEN, "CTYPE H5T_C_S1;\n"); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) goto out; - if(H5Tset_cset(str_type, cset) < 0) + goto next; + } + + /* If not equal to C variable-length string, check Fortran type. + * Actually H5Tequal can't tell difference between H5T_C_S1 and + * H5T_FORTRAN_S1!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! */ + if (H5Tclose(str_type) < 0) + goto out; + if ((str_type = H5Tcopy(H5T_FORTRAN_S1)) < 0) + goto out; + if (H5Tset_cset(str_type, cset) < 0) + goto out; + if (H5Tset_size(str_type, size) < 0) + goto out; + if (H5Tset_strpad(str_type, str_pad) < 0) + goto out; + + /* Are the two types equal? */ + if (H5Tequal(tmp_type, str_type)) { + HDsnprintf(tmp_str, TMP_LEN, "CTYPE H5T_FORTRAN_S1;\n"); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) goto out; - if(H5Tset_size(str_type, size) < 0) + goto next; + } + + /* Change the endianness and see if they're equal. */ + if ((order = H5Tget_order(tmp_type)) < 0) + goto out; + if (order == H5T_ORDER_LE) { + if (H5Tset_order(str_type, H5T_ORDER_LE) < 0) goto out; - if(H5Tset_strpad(str_type, str_pad) < 0) + } + else if (order == H5T_ORDER_BE) { + if (H5Tset_order(str_type, H5T_ORDER_BE) < 0) goto out; + } - /* Are the two types equal? */ - if (H5Tequal(tmp_type, str_type)) { - HDsnprintf(tmp_str, TMP_LEN, "CTYPE H5T_FORTRAN_S1;\n"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; - goto next; - } - - /* Change the endianness and see if they're equal. */ - if((order = H5Tget_order(tmp_type)) < 0) - goto out; - if(order==H5T_ORDER_LE) { - if(H5Tset_order(str_type, H5T_ORDER_LE) < 0) - goto out; - } else if(order==H5T_ORDER_BE) { - if(H5Tset_order(str_type, H5T_ORDER_BE) < 0) - goto out; - } - - /* Are the two types equal? */ - if (H5Tequal(tmp_type, str_type)) { - HDsnprintf(tmp_str, TMP_LEN, "CTYPE H5T_FORTRAN_S1;\n"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; - goto next; - } - - /* Type doesn't match any of above. */ - HDsnprintf(tmp_str, TMP_LEN, "CTYPE unknown_one_character_type;\n"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + /* Are the two types equal? */ + if (H5Tequal(tmp_type, str_type)) { + HDsnprintf(tmp_str, TMP_LEN, "CTYPE H5T_FORTRAN_S1;\n"); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) goto out; + goto next; + } + + /* Type doesn't match any of above. */ + HDsnprintf(tmp_str, TMP_LEN, "CTYPE unknown_one_character_type;\n"); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; next: - H5Tclose(str_type); - H5Tclose(tmp_type); + H5Tclose(str_type); + H5Tclose(tmp_type); - /* Print closing */ - indent -= COL; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) - goto out; - HDsnprintf(tmp_str, TMP_LEN, "}"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; + /* Print closing */ + indent -= COL; + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + goto out; + HDsnprintf(tmp_str, TMP_LEN, "}"); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; - break; - } - case H5T_OPAQUE: - { + break; + } + case H5T_OPAQUE: { char *tag = NULL; /* Print lead-in */ HDsnprintf(dt_str, *slen, "H5T_OPAQUE {\n"); indent += COL; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) goto out; HDsnprintf(tmp_str, TMP_LEN, "OPQ_SIZE %lu;\n", (unsigned long)H5Tget_size(dtype)); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) goto out; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) goto out; tag = H5Tget_tag(dtype); - if(tag) { + if (tag) { HDsnprintf(tmp_str, TMP_LEN, "OPQ_TAG \"%s\";\n", tag); - if(tag) + if (tag) H5free_memory(tag); tag = NULL; - } else + } + else HDsnprintf(tmp_str, TMP_LEN, "OPQ_TAG \"\";\n"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) goto out; /* Print closing */ indent -= COL; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) goto out; HDsnprintf(tmp_str, TMP_LEN, "}"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) goto out; break; - } - case H5T_ENUM: - { - hid_t super; - size_t super_len; - char* stmp = NULL; - - /* Print lead-in */ - HDsnprintf(dt_str, *slen, "H5T_ENUM {\n"); - indent += COL; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) - goto out; + } + case H5T_ENUM: { + hid_t super; + size_t super_len; + char * stmp = NULL; - if((super = H5Tget_super(dtype)) < 0) - goto out; - if(H5LTdtype_to_text(super, NULL, lang, &super_len) < 0) - goto out; - stmp = (char*)HDcalloc(super_len, sizeof(char)); - if(H5LTdtype_to_text(super, stmp, lang, &super_len) < 0) - goto out; - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, stmp))) - goto out; + /* Print lead-in */ + HDsnprintf(dt_str, *slen, "H5T_ENUM {\n"); + indent += COL; + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + goto out; - if(stmp) - HDfree(stmp); - stmp = NULL; + if ((super = H5Tget_super(dtype)) < 0) + goto out; + if (H5LTdtype_to_text(super, NULL, lang, &super_len) < 0) + goto out; + stmp = (char *)HDcalloc(super_len, sizeof(char)); + if (H5LTdtype_to_text(super, stmp, lang, &super_len) < 0) + goto out; + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, stmp))) + goto out; - HDsnprintf(tmp_str, TMP_LEN, ";\n"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; - H5Tclose(super); + if (stmp) + HDfree(stmp); + stmp = NULL; - if(!(dt_str = print_enum(dtype, dt_str, slen, no_user_buf, indent))) - goto out; + HDsnprintf(tmp_str, TMP_LEN, ";\n"); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; + H5Tclose(super); - /* Print closing */ - indent -= COL; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) - goto out; - HDsnprintf(tmp_str, TMP_LEN, "}"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; + if (!(dt_str = print_enum(dtype, dt_str, slen, no_user_buf, indent))) + goto out; - break; - } - case H5T_VLEN: - { - hid_t super; - size_t super_len; - char* stmp = NULL; - - /* Print lead-in */ - HDsnprintf(dt_str, *slen, "H5T_VLEN {\n"); - indent += COL; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) - goto out; + /* Print closing */ + indent -= COL; + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + goto out; + HDsnprintf(tmp_str, TMP_LEN, "}"); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; - if((super = H5Tget_super(dtype)) < 0) - goto out; - if(H5LTdtype_to_text(super, NULL, lang, &super_len) < 0) - goto out; - stmp = (char*)HDcalloc(super_len, sizeof(char)); - if(H5LTdtype_to_text(super, stmp, lang, &super_len) < 0) - goto out; - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, stmp))) - goto out; + break; + } + case H5T_VLEN: { + hid_t super; + size_t super_len; + char * stmp = NULL; - if(stmp) - HDfree(stmp); - stmp = NULL; - HDsnprintf(tmp_str, TMP_LEN, "\n"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; - H5Tclose(super); + /* Print lead-in */ + HDsnprintf(dt_str, *slen, "H5T_VLEN {\n"); + indent += COL; + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + goto out; - /* Print closing */ - indent -= COL; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) - goto out; - HDsnprintf(tmp_str, TMP_LEN, "}"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; + if ((super = H5Tget_super(dtype)) < 0) + goto out; + if (H5LTdtype_to_text(super, NULL, lang, &super_len) < 0) + goto out; + stmp = (char *)HDcalloc(super_len, sizeof(char)); + if (H5LTdtype_to_text(super, stmp, lang, &super_len) < 0) + goto out; + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, stmp))) + goto out; - break; - } - case H5T_ARRAY: - { - hid_t super; - size_t super_len; - char* stmp = NULL; - hsize_t dims[H5S_MAX_RANK]; - int ndims; - - /* Print lead-in */ - HDsnprintf(dt_str, *slen, "H5T_ARRAY {\n"); - indent += COL; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + if (stmp) + HDfree(stmp); + stmp = NULL; + HDsnprintf(tmp_str, TMP_LEN, "\n"); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; + H5Tclose(super); + + /* Print closing */ + indent -= COL; + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + goto out; + HDsnprintf(tmp_str, TMP_LEN, "}"); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; + + break; + } + case H5T_ARRAY: { + hid_t super; + size_t super_len; + char * stmp = NULL; + hsize_t dims[H5S_MAX_RANK]; + int ndims; + + /* Print lead-in */ + HDsnprintf(dt_str, *slen, "H5T_ARRAY {\n"); + indent += COL; + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + goto out; + + /* Get array information */ + if ((ndims = H5Tget_array_ndims(dtype)) < 0) + goto out; + if (H5Tget_array_dims2(dtype, dims) < 0) + goto out; + + /* Print array dimensions */ + for (i = 0; i < ndims; i++) { + HDsnprintf(tmp_str, TMP_LEN, "[%d]", (int)dims[i]); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) goto out; + } + HDsnprintf(tmp_str, TMP_LEN, " "); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; - /* Get array information */ - if((ndims = H5Tget_array_ndims(dtype)) < 0) + if ((super = H5Tget_super(dtype)) < 0) + goto out; + if (H5LTdtype_to_text(super, NULL, lang, &super_len) < 0) + goto out; + stmp = (char *)HDcalloc(super_len, sizeof(char)); + if (H5LTdtype_to_text(super, stmp, lang, &super_len) < 0) + goto out; + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, stmp))) + goto out; + if (stmp) + HDfree(stmp); + stmp = NULL; + HDsnprintf(tmp_str, TMP_LEN, "\n"); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; + H5Tclose(super); + + /* Print closing */ + indent -= COL; + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + goto out; + HDsnprintf(tmp_str, TMP_LEN, "}"); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; + + break; + } + case H5T_COMPOUND: { + char * mname = NULL; + hid_t mtype; + size_t moffset; + H5T_class_t mclass; + size_t mlen; + char * mtmp = NULL; + int nmembs; + + if ((nmembs = H5Tget_nmembers(dtype)) < 0) + goto out; + + HDsnprintf(dt_str, *slen, "H5T_COMPOUND {\n"); + indent += COL; + + for (i = 0; i < nmembs; i++) { + if ((mname = H5Tget_member_name(dtype, (unsigned)i)) == NULL) goto out; - if(H5Tget_array_dims2(dtype, dims) < 0) + if ((mtype = H5Tget_member_type(dtype, (unsigned)i)) < 0) + goto out; + moffset = H5Tget_member_offset(dtype, (unsigned)i); + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) goto out; - /* Print array dimensions */ - for (i = 0; i < ndims; i++) { - HDsnprintf(tmp_str, TMP_LEN, "[%d]", (int) dims[i]); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; - } - HDsnprintf(tmp_str, TMP_LEN, " "); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; - - if((super = H5Tget_super(dtype)) < 0) + if ((mclass = H5Tget_class(mtype)) < 0) goto out; - if(H5LTdtype_to_text(super, NULL, lang, &super_len) < 0) + if (H5T_COMPOUND == mclass) + indent += COL; + + if (H5LTdtype_to_text(mtype, NULL, lang, &mlen) < 0) goto out; - stmp = (char*)HDcalloc(super_len, sizeof(char)); - if(H5LTdtype_to_text(super, stmp, lang, &super_len) < 0) + mtmp = (char *)HDcalloc(mlen, sizeof(char)); + if (H5LTdtype_to_text(mtype, mtmp, lang, &mlen) < 0) goto out; - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, stmp))) - goto out; - if(stmp) - HDfree(stmp); - stmp = NULL; - HDsnprintf(tmp_str, TMP_LEN, "\n"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; - H5Tclose(super); - - /* Print closing */ - indent -= COL; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, mtmp))) goto out; - HDsnprintf(tmp_str, TMP_LEN, "}"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; + if (mtmp) + HDfree(mtmp); + mtmp = NULL; - break; - } - case H5T_COMPOUND: - { - char *mname = NULL; - hid_t mtype; - size_t moffset; - H5T_class_t mclass; - size_t mlen; - char* mtmp = NULL; - int nmembs; - - if((nmembs = H5Tget_nmembers(dtype)) < 0) - goto out; + if (H5T_COMPOUND == mclass) + indent -= COL; - HDsnprintf(dt_str, *slen, "H5T_COMPOUND {\n"); - indent += COL; - - for (i = 0; i < nmembs; i++) { - if((mname = H5Tget_member_name(dtype, (unsigned)i))==NULL) - goto out; - if((mtype = H5Tget_member_type(dtype, (unsigned)i)) < 0) - goto out; - moffset = H5Tget_member_offset(dtype, (unsigned)i); - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) - goto out; - - if((mclass = H5Tget_class(mtype)) < 0) - goto out; - if (H5T_COMPOUND == mclass) - indent += COL; - - if(H5LTdtype_to_text(mtype, NULL, lang, &mlen) < 0) - goto out; - mtmp = (char*)HDcalloc(mlen, sizeof(char)); - if(H5LTdtype_to_text(mtype, mtmp, lang, &mlen) < 0) - goto out; - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, mtmp))) - goto out; - if(mtmp) - HDfree(mtmp); - mtmp = NULL; - - if (H5T_COMPOUND == mclass) - indent -= COL; - - HDsnprintf(tmp_str, TMP_LEN, " \"%s\"", mname); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; - if(mname) - H5free_memory(mname); - mname = NULL; - - HDsnprintf(tmp_str, TMP_LEN, " : %lu;\n", (unsigned long)moffset); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; - } - - /* Print closing */ - indent -= COL; - if(!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + HDsnprintf(tmp_str, TMP_LEN, " \"%s\"", mname); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) goto out; - HDsnprintf(tmp_str, TMP_LEN, "}"); - if(!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) - goto out; + if (mname) + H5free_memory(mname); + mname = NULL; - break; + HDsnprintf(tmp_str, TMP_LEN, " : %lu;\n", (unsigned long)moffset); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; } + + /* Print closing */ + indent -= COL; + if (!(dt_str = indentation(indent + COL, dt_str, no_user_buf, slen))) + goto out; + HDsnprintf(tmp_str, TMP_LEN, "}"); + if (!(dt_str = realloc_and_append(no_user_buf, slen, dt_str, tmp_str))) + goto out; + + break; + } case H5T_TIME: HDsnprintf(dt_str, *slen, "H5T_TIME: not yet implemented"); break; @@ -3057,15 +2959,15 @@ next: HDsnprintf(dt_str, *slen, "H5T_NO_CLASS"); break; case H5T_REFERENCE: - if (H5Tequal(dtype, H5T_STD_REF_DSETREG) == TRUE) { - HDsnprintf(dt_str, *slen, " H5T_REFERENCE { H5T_STD_REF_DSETREG }"); - } - else { - HDsnprintf(dt_str, *slen, " H5T_REFERENCE { H5T_STD_REF_OBJECT }"); - } - break; + if (H5Tequal(dtype, H5T_STD_REF_DSETREG) == TRUE) { + HDsnprintf(dt_str, *slen, " H5T_REFERENCE { H5T_STD_REF_DSETREG }"); + } + else { + HDsnprintf(dt_str, *slen, " H5T_REFERENCE { H5T_STD_REF_OBJECT }"); + } + break; case H5T_NCLASSES: - break; + break; default: HDsnprintf(dt_str, *slen, "unknown data type"); } @@ -3077,747 +2979,701 @@ out: } /*------------------------------------------------------------------------- -* -* Get attribute functions -* -*------------------------------------------------------------------------- -*/ - + * + * Get attribute functions + * + *------------------------------------------------------------------------- + */ + +/*------------------------------------------------------------------------- + * Function: H5LTget_attribute_string + * + * Purpose: Reads an attribute named attr_name + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 19, 2002 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ -/*------------------------------------------------------------------------- -* Function: H5LTget_attribute_string -* -* Purpose: Reads an attribute named attr_name -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 19, 2002 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - - -herr_t H5LTget_attribute_string( hid_t loc_id, - const char *obj_name, - const char *attr_name, - char *data ) +herr_t +H5LTget_attribute_string(hid_t loc_id, const char *obj_name, const char *attr_name, char *data) { /* identifiers */ - hid_t obj_id; + hid_t obj_id; /* check the arguments */ - if (obj_name == NULL) - return -1; - if (attr_name == NULL) - return -1; + if (obj_name == NULL) + return -1; + if (attr_name == NULL) + return -1; /* Open the object */ - if ((obj_id = H5Oopen( loc_id, obj_name, H5P_DEFAULT)) < 0) + if ((obj_id = H5Oopen(loc_id, obj_name, H5P_DEFAULT)) < 0) return -1; /* Get the attribute */ - if ( H5LT_get_attribute_disk( obj_id, attr_name, data ) < 0 ) - { - H5Oclose(obj_id); - return -1; + if (H5LT_get_attribute_disk(obj_id, attr_name, data) < 0) { + H5Oclose(obj_id); + return -1; } /* Close the object */ - if(H5Oclose(obj_id) < 0) + if (H5Oclose(obj_id) < 0) return -1; return 0; - } /*------------------------------------------------------------------------- -* Function: H5LTget_attribute_char -* -* Purpose: Reads an attribute named attr_name -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 19, 2002 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -herr_t H5LTget_attribute_char( hid_t loc_id, - const char *obj_name, - const char *attr_name, - char *data ) + * Function: H5LTget_attribute_char + * + * Purpose: Reads an attribute named attr_name + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 19, 2002 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +herr_t +H5LTget_attribute_char(hid_t loc_id, const char *obj_name, const char *attr_name, char *data) { /* Get the attribute */ - if(H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_CHAR, data) < 0) + if (H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_CHAR, data) < 0) return -1; return 0; } /*------------------------------------------------------------------------- -* Function: H5LTget_attribute_uchar -* -* Purpose: Reads an attribute named attr_name -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: March 8, 2004 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -herr_t H5LTget_attribute_uchar( hid_t loc_id, - const char *obj_name, - const char *attr_name, - unsigned char *data ) + * Function: H5LTget_attribute_uchar + * + * Purpose: Reads an attribute named attr_name + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: March 8, 2004 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +herr_t +H5LTget_attribute_uchar(hid_t loc_id, const char *obj_name, const char *attr_name, unsigned char *data) { /* Get the attribute */ - if(H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_UCHAR, data) < 0) + if (H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_UCHAR, data) < 0) return -1; return 0; } - - /*------------------------------------------------------------------------- -* Function: H5LTget_attribute_short -* -* Purpose: Reads an attribute named attr_name -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 19, 2002 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -herr_t H5LTget_attribute_short( hid_t loc_id, - const char *obj_name, - const char *attr_name, - short *data ) + * Function: H5LTget_attribute_short + * + * Purpose: Reads an attribute named attr_name + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 19, 2002 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +herr_t +H5LTget_attribute_short(hid_t loc_id, const char *obj_name, const char *attr_name, short *data) { /* Get the attribute */ - if(H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_SHORT, data) < 0) + if (H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_SHORT, data) < 0) return -1; return 0; } /*------------------------------------------------------------------------- -* Function: H5LTget_attribute_ushort -* -* Purpose: Reads an attribute named attr_name -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: March 8, 2004 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -herr_t H5LTget_attribute_ushort( hid_t loc_id, - const char *obj_name, - const char *attr_name, - unsigned short *data ) + * Function: H5LTget_attribute_ushort + * + * Purpose: Reads an attribute named attr_name + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: March 8, 2004 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +herr_t +H5LTget_attribute_ushort(hid_t loc_id, const char *obj_name, const char *attr_name, unsigned short *data) { /* Get the attribute */ - if(H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_USHORT, data) < 0) + if (H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_USHORT, data) < 0) return -1; return 0; } - - /*------------------------------------------------------------------------- -* Function: H5LTget_attribute_int -* -* Purpose: Reads an attribute named attr_name -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 19, 2002 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -herr_t H5LTget_attribute_int( hid_t loc_id, - const char *obj_name, - const char *attr_name, - int *data ) + * Function: H5LTget_attribute_int + * + * Purpose: Reads an attribute named attr_name + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 19, 2002 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +herr_t +H5LTget_attribute_int(hid_t loc_id, const char *obj_name, const char *attr_name, int *data) { /* Get the attribute */ - if(H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_INT, data) < 0) + if (H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_INT, data) < 0) return -1; return 0; } /*------------------------------------------------------------------------- -* Function: H5LTget_attribute_uint -* -* Purpose: Reads an attribute named attr_name -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: March 8, 2004 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -herr_t H5LTget_attribute_uint( hid_t loc_id, - const char *obj_name, - const char *attr_name, - unsigned int *data ) + * Function: H5LTget_attribute_uint + * + * Purpose: Reads an attribute named attr_name + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: March 8, 2004 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +herr_t +H5LTget_attribute_uint(hid_t loc_id, const char *obj_name, const char *attr_name, unsigned int *data) { /* Get the attribute */ - if(H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_UINT, data) < 0) + if (H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_UINT, data) < 0) return -1; return 0; } - - /*------------------------------------------------------------------------- -* Function: H5LTget_attribute_long -* -* Purpose: Reads an attribute named attr_name -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 19, 2002 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -herr_t H5LTget_attribute_long( hid_t loc_id, - const char *obj_name, - const char *attr_name, - long *data ) + * Function: H5LTget_attribute_long + * + * Purpose: Reads an attribute named attr_name + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 19, 2002 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +herr_t +H5LTget_attribute_long(hid_t loc_id, const char *obj_name, const char *attr_name, long *data) { /* Get the attribute */ - if(H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_LONG, data) < 0) + if (H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_LONG, data) < 0) return -1; return 0; } /*------------------------------------------------------------------------- -* Function: H5LTget_attribute_long_long -* -* Purpose: Reads an attribute named attr_name -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Elena Pourmal, epourmal@ncsa.uiuc.edu -* -* Date: June 17, 2005 -* -* Comments: This funstion was added to suuport INTEGER*8 Fortran types -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -herr_t H5LTget_attribute_long_long( hid_t loc_id, - const char *obj_name, - const char *attr_name, - long long *data ) + * Function: H5LTget_attribute_long_long + * + * Purpose: Reads an attribute named attr_name + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Elena Pourmal + * + * Date: June 17, 2005 + * + * Comments: This function was added to support INTEGER*8 Fortran types + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +herr_t +H5LTget_attribute_long_long(hid_t loc_id, const char *obj_name, const char *attr_name, long long *data) { /* Get the attribute */ - if(H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_LLONG, data) < 0) + if (H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_LLONG, data) < 0) return -1; return 0; } - /*------------------------------------------------------------------------- -* Function: H5LTget_attribute_ulong -* -* Purpose: Reads an attribute named attr_name -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: March 8, 2004 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -herr_t H5LTget_attribute_ulong( hid_t loc_id, - const char *obj_name, - const char *attr_name, - unsigned long *data ) + * Function: H5LTget_attribute_ulong + * + * Purpose: Reads an attribute named attr_name + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: March 8, 2004 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +herr_t +H5LTget_attribute_ulong(hid_t loc_id, const char *obj_name, const char *attr_name, unsigned long *data) { /* Get the attribute */ - if(H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_ULONG, data) < 0) + if (H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_ULONG, data) < 0) return -1; return 0; } - /*------------------------------------------------------------------------- -* Function: H5LTget_attribute_float -* -* Purpose: Reads an attribute named attr_name -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 19, 2002 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - + * Function: H5LTget_attribute_float + * + * Purpose: Reads an attribute named attr_name + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 19, 2002 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ -herr_t H5LTget_attribute_float( hid_t loc_id, - const char *obj_name, - const char *attr_name, - float *data ) +herr_t +H5LTget_attribute_float(hid_t loc_id, const char *obj_name, const char *attr_name, float *data) { /* Get the attribute */ - if(H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_FLOAT, data) < 0) + if (H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_FLOAT, data) < 0) return -1; return 0; } - /*------------------------------------------------------------------------- -* Function: H5LTget_attribute_double -* -* Purpose: Reads an attribute named attr_name -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 19, 2002 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - + * Function: H5LTget_attribute_double + * + * Purpose: Reads an attribute named attr_name + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 19, 2002 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ -herr_t H5LTget_attribute_double( hid_t loc_id, - const char *obj_name, - const char *attr_name, - double *data ) +herr_t +H5LTget_attribute_double(hid_t loc_id, const char *obj_name, const char *attr_name, double *data) { /* Get the attribute */ - if(H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_DOUBLE, data) < 0) + if (H5LT_get_attribute_mem(loc_id, obj_name, attr_name, H5T_NATIVE_DOUBLE, data) < 0) return -1; return 0; } - /*------------------------------------------------------------------------- -* Function: H5LTget_attribute -* -* Purpose: Reads an attribute named attr_name with the memory type mem_type_id -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 19, 2002 -* -* Comments: Private function -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ + * Function: H5LTget_attribute + * + * Purpose: Reads an attribute named attr_name with the memory type mem_type_id + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 19, 2002 + * + * Comments: Private function + * + * Modifications: + * + *------------------------------------------------------------------------- + */ - -herr_t H5LTget_attribute( hid_t loc_id, - const char *obj_name, - const char *attr_name, - hid_t mem_type_id, - void *data ) +herr_t +H5LTget_attribute(hid_t loc_id, const char *obj_name, const char *attr_name, hid_t mem_type_id, void *data) { /* Get the attribute */ - if(H5LT_get_attribute_mem(loc_id, obj_name, attr_name, mem_type_id, data) < 0) + if (H5LT_get_attribute_mem(loc_id, obj_name, attr_name, mem_type_id, data) < 0) return -1; return 0; } - -/*------------------------------------------------------------------------- -* private functions -*------------------------------------------------------------------------- -*/ - - /*------------------------------------------------------------------------- -* Function: H5LT_get_attribute_mem -* -* Purpose: Reads an attribute named attr_name with the memory type mem_type_id -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 19, 2002 -* -* Comments: Private function -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ - + * private functions + *------------------------------------------------------------------------- + */ + +/*------------------------------------------------------------------------- + * Function: H5LT_get_attribute_mem + * + * Purpose: Reads an attribute named attr_name with the memory type mem_type_id + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 19, 2002 + * + * Comments: Private function + * + * Modifications: + * + *------------------------------------------------------------------------- + */ -static herr_t H5LT_get_attribute_mem(hid_t loc_id, - const char *obj_name, - const char *attr_name, - hid_t mem_type_id, - void *data) +static herr_t +H5LT_get_attribute_mem(hid_t loc_id, const char *obj_name, const char *attr_name, hid_t mem_type_id, + void *data) { /* identifiers */ - hid_t obj_id = -1; + hid_t obj_id = -1; hid_t attr_id = -1; /* check the arguments */ - if (obj_name == NULL) - return -1; - if (attr_name == NULL) - return -1; + if (obj_name == NULL) + return -1; + if (attr_name == NULL) + return -1; /* Open the object */ - if((obj_id = H5Oopen(loc_id, obj_name, H5P_DEFAULT)) < 0) + if ((obj_id = H5Oopen(loc_id, obj_name, H5P_DEFAULT)) < 0) goto out; - if((attr_id = H5Aopen(obj_id, attr_name, H5P_DEFAULT)) < 0) + if ((attr_id = H5Aopen(obj_id, attr_name, H5P_DEFAULT)) < 0) goto out; - if(H5Aread(attr_id, mem_type_id, data) < 0) + if (H5Aread(attr_id, mem_type_id, data) < 0) goto out; - if(H5Aclose(attr_id) < 0) + if (H5Aclose(attr_id) < 0) goto out; attr_id = -1; /* Close the object */ - if(H5Oclose(obj_id) < 0) + if (H5Oclose(obj_id) < 0) goto out; obj_id = -1; return 0; out: - if(obj_id > 0) + if (obj_id > 0) H5Oclose(obj_id); - if(attr_id > 0) + if (attr_id > 0) H5Aclose(attr_id); return -1; } /*------------------------------------------------------------------------- -* Function: H5LT_get_attribute_disk -* -* Purpose: Reads an attribute named attr_name with the datatype stored on disk -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: September 19, 2002 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ + * Function: H5LT_get_attribute_disk + * + * Purpose: Reads an attribute named attr_name with the datatype stored on disk + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente + * + * Date: September 19, 2002 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ -herr_t H5LT_get_attribute_disk( hid_t loc_id, - const char *attr_name, - void *attr_out ) +herr_t +H5LT_get_attribute_disk(hid_t loc_id, const char *attr_name, void *attr_out) { /* identifiers */ hid_t attr_id; hid_t attr_type; - if(( attr_id = H5Aopen(loc_id, attr_name, H5P_DEFAULT)) < 0) + if ((attr_id = H5Aopen(loc_id, attr_name, H5P_DEFAULT)) < 0) return -1; - if((attr_type = H5Aget_type(attr_id)) < 0) + if ((attr_type = H5Aget_type(attr_id)) < 0) goto out; - if(H5Aread(attr_id, attr_type, attr_out) < 0) + if (H5Aread(attr_id, attr_type, attr_out) < 0) goto out; - if(H5Tclose(attr_type) < 0) + if (H5Tclose(attr_type) < 0) goto out; - if ( H5Aclose( attr_id ) < 0 ) - return -1;; + if (H5Aclose(attr_id) < 0) + return -1; + ; return 0; out: - H5Tclose( attr_type ); - H5Aclose( attr_id ); + H5Tclose(attr_type); + H5Aclose(attr_id); return -1; } - -/*------------------------------------------------------------------------- -* Function: H5LT_set_attribute_string -* -* Purpose: creates and writes an attribute named NAME to the dataset DSET_ID -* -* Return: FAIL on error, SUCCESS on success -* -* Programmer: pvn@ncsa.uiuc.edu -* -* Date: January 04, 2005 -* -* Comments: -* -* Modifications: -* -*------------------------------------------------------------------------- -*/ -herr_t H5LT_set_attribute_string(hid_t dset_id, - const char *name, - const char *buf ) +/*------------------------------------------------------------------------- + * Function: H5LT_set_attribute_string + * + * Purpose: creates and writes an attribute named NAME to the dataset DSET_ID + * + * Return: FAIL on error, SUCCESS on success + * + * Programmer: Pedro Vicente + * + * Date: January 04, 2005 + * + * Comments: + * + * Modifications: + * + *------------------------------------------------------------------------- + */ +herr_t +H5LT_set_attribute_string(hid_t dset_id, const char *name, const char *buf) { - hid_t tid; - hid_t sid = -1; - hid_t aid = -1; - int has_attr; - size_t size; + hid_t tid; + hid_t sid = -1; + hid_t aid = -1; + int has_attr; + size_t size; /* verify if the attribute already exists */ - has_attr = H5LT_find_attribute(dset_id,name); + has_attr = H5LT_find_attribute(dset_id, name); /* the attribute already exists, delete it */ - if(has_attr == 1) - if(H5Adelete(dset_id, name) < 0) + if (has_attr == 1) + if (H5Adelete(dset_id, name) < 0) return FAIL; /*------------------------------------------------------------------------- - * create the attribute type - *------------------------------------------------------------------------- - */ - if((tid = H5Tcopy(H5T_C_S1)) < 0) + * create the attribute type + *------------------------------------------------------------------------- + */ + if ((tid = H5Tcopy(H5T_C_S1)) < 0) return FAIL; size = HDstrlen(buf) + 1; /* extra null term */ - if(H5Tset_size(tid,(size_t)size) < 0) + if (H5Tset_size(tid, (size_t)size) < 0) goto out; - if(H5Tset_strpad(tid, H5T_STR_NULLTERM) < 0) + if (H5Tset_strpad(tid, H5T_STR_NULLTERM) < 0) goto out; - if((sid = H5Screate(H5S_SCALAR)) < 0) + if ((sid = H5Screate(H5S_SCALAR)) < 0) goto out; - /*------------------------------------------------------------------------- - * create and write the attribute - *------------------------------------------------------------------------- - */ - if((aid = H5Acreate2(dset_id, name, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) + * create and write the attribute + *------------------------------------------------------------------------- + */ + if ((aid = H5Acreate2(dset_id, name, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; - if(H5Awrite(aid, tid, buf) < 0) + if (H5Awrite(aid, tid, buf) < 0) goto out; - if(H5Aclose(aid) < 0) + if (H5Aclose(aid) < 0) goto out; - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; - if(H5Tclose(tid) < 0) + if (H5Tclose(tid) < 0) goto out; return SUCCEED; /* error zone */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Aclose(aid); H5Tclose(tid); H5Sclose(sid); - } H5E_END_TRY; + } + H5E_END_TRY; return FAIL; - } htri_t H5LTpath_valid(hid_t loc_id, const char *path, hbool_t check_object_valid) - { - char *tmp_path = NULL; /* Temporary copy of the path */ - char *curr_name; /* Pointer to current component of path name */ - char *delimit; /* Pointer to path delimiter during traversal */ - H5I_type_t obj_type; - htri_t link_exists, obj_exists; - size_t path_length; - htri_t ret_value; - - /* Initialize */ - ret_value = FALSE; - - /* check the arguments */ - if (path == NULL) { - ret_value = FAIL; - goto done; - } - - /* Find the type of loc_id */ - if((obj_type = H5Iget_type(loc_id)) == H5I_BADID) { - ret_value = FAIL; - goto done; - } - - /* Find the length of the path */ - path_length = HDstrlen(path); - - /* Check if the identifier is the object itself, i.e. path is '.' */ - if(HDstrncmp(path, ".", path_length) == 0) { - if(check_object_valid) { - obj_exists = H5Oexists_by_name(loc_id, path, H5P_DEFAULT); - ret_value = obj_exists; - goto done; - } else { - ret_value = TRUE; /* Since the object is the identifier itself, - * we can only check if loc_id is a valid type */ - goto done; - } - } - - /* Duplicate the path to use */ - if(NULL == (tmp_path = HDstrdup(path))) { - ret_value = FAIL; - goto done; - } - - curr_name = tmp_path; - - /* check if absolute pathname */ - if(HDstrncmp(path, "/", 1) == 0) curr_name++; - - /* check if relative path name starts with "./" */ - if(HDstrncmp(path, "./", 2) == 0) curr_name += 2; - - while((delimit=HDstrchr(curr_name,'/'))!=NULL) { - /* Change the delimiter to terminate the string */ - *delimit='\0'; - - obj_exists = FALSE; - if((link_exists = H5Lexists(loc_id, tmp_path, H5P_DEFAULT)) < 0) { - ret_value = FAIL; - goto done; - } - - /* If target link does not exist then no reason to - * continue checking the path */ - if(link_exists != TRUE) { - ret_value = FALSE; - goto done; - } - - /* Determine if link resolves to an actual object */ - if((obj_exists = H5Oexists_by_name(loc_id, tmp_path, H5P_DEFAULT)) < 0) { - ret_value = FAIL; - goto done; - } - - if(obj_exists != TRUE) - break; - - /* Change the delimiter back to '/' */ - *delimit='/'; - - /* Advance the pointer in the path to the start of the next component */ - curr_name = delimit + 1; - - } /* end while */ - - /* Should be pointing to the last component in the path name now... */ - - /* Check if link does not exist */ - if((link_exists = H5Lexists(loc_id, tmp_path, H5P_DEFAULT)) < 0) { - ret_value = FAIL; - } else { - ret_value = link_exists; - /* Determine if link resolves to an actual object for check_object_valid TRUE */ - if(check_object_valid == TRUE && link_exists == TRUE) { - if((obj_exists = H5Oexists_by_name(loc_id, tmp_path, H5P_DEFAULT)) < 0) { - ret_value = FAIL; - } else { - ret_value = obj_exists; - } - } - } +{ + char * tmp_path = NULL; /* Temporary copy of the path */ + char * curr_name; /* Pointer to current component of path name */ + char * delimit; /* Pointer to path delimiter during traversal */ + H5I_type_t obj_type; + htri_t link_exists, obj_exists; + size_t path_length; + htri_t ret_value; + + /* Initialize */ + ret_value = FALSE; + + /* check the arguments */ + if (path == NULL) { + ret_value = FAIL; + goto done; + } + + /* Find the type of loc_id */ + if ((obj_type = H5Iget_type(loc_id)) == H5I_BADID) { + ret_value = FAIL; + goto done; + } + + /* Find the length of the path */ + path_length = HDstrlen(path); + + /* Check if the identifier is the object itself, i.e. path is '.' */ + if (HDstrncmp(path, ".", path_length) == 0) { + if (check_object_valid) { + obj_exists = H5Oexists_by_name(loc_id, path, H5P_DEFAULT); + ret_value = obj_exists; + goto done; + } + else { + ret_value = TRUE; /* Since the object is the identifier itself, + * we can only check if loc_id is a valid type */ + goto done; + } + } + + /* Duplicate the path to use */ + if (NULL == (tmp_path = HDstrdup(path))) { + ret_value = FAIL; + goto done; + } + + curr_name = tmp_path; + + /* check if absolute pathname */ + if (HDstrncmp(path, "/", 1) == 0) + curr_name++; + + /* check if relative path name starts with "./" */ + if (HDstrncmp(path, "./", 2) == 0) + curr_name += 2; + + while ((delimit = HDstrchr(curr_name, '/')) != NULL) { + /* Change the delimiter to terminate the string */ + *delimit = '\0'; + + obj_exists = FALSE; + if ((link_exists = H5Lexists(loc_id, tmp_path, H5P_DEFAULT)) < 0) { + ret_value = FAIL; + goto done; + } + + /* If target link does not exist then no reason to + * continue checking the path */ + if (link_exists != TRUE) { + ret_value = FALSE; + goto done; + } + + /* Determine if link resolves to an actual object */ + if ((obj_exists = H5Oexists_by_name(loc_id, tmp_path, H5P_DEFAULT)) < 0) { + ret_value = FAIL; + goto done; + } + + if (obj_exists != TRUE) + break; + + /* Change the delimiter back to '/' */ + *delimit = '/'; + + /* Advance the pointer in the path to the start of the next component */ + curr_name = delimit + 1; + + } /* end while */ + + /* Should be pointing to the last component in the path name now... */ + + /* Check if link does not exist */ + if ((link_exists = H5Lexists(loc_id, tmp_path, H5P_DEFAULT)) < 0) { + ret_value = FAIL; + } + else { + ret_value = link_exists; + /* Determine if link resolves to an actual object for check_object_valid TRUE */ + if (check_object_valid == TRUE && link_exists == TRUE) { + if ((obj_exists = H5Oexists_by_name(loc_id, tmp_path, H5P_DEFAULT)) < 0) { + ret_value = FAIL; + } + else { + ret_value = obj_exists; + } + } + } done: - if(tmp_path != NULL) - HDfree(tmp_path); + if (tmp_path != NULL) + HDfree(tmp_path); - return ret_value; - } + return ret_value; +} diff --git a/hl/src/H5LTanalyze.c b/hl/src/H5LTanalyze.c index e49795a..e35f20b 100644 --- a/hl/src/H5LTanalyze.c +++ b/hl/src/H5LTanalyze.c @@ -1,25 +1,34 @@ -#if __GNUC__ >= 4 && __GNUC_MINOR__ >=2 +#if defined (__GNUC__) +#if ((__GNUC__ * 100) + __GNUC_MINOR__) >= 402 #pragma GCC diagnostic ignored "-Wconversion" #pragma GCC diagnostic ignored "-Wimplicit-function-declaration" #pragma GCC diagnostic ignored "-Wlarger-than=" #pragma GCC diagnostic ignored "-Wmissing-prototypes" #pragma GCC diagnostic ignored "-Wnested-externs" #pragma GCC diagnostic ignored "-Wold-style-definition" +#pragma GCC diagnostic ignored "-Wredundant-decls" #pragma GCC diagnostic ignored "-Wsign-compare" #pragma GCC diagnostic ignored "-Wsign-conversion" +#pragma GCC diagnostic ignored "-Wstrict-overflow" #pragma GCC diagnostic ignored "-Wstrict-prototypes" +#pragma GCC diagnostic ignored "-Wsuggest-attribute=const" +#pragma GCC diagnostic ignored "-Wsuggest-attribute=pure" #pragma GCC diagnostic ignored "-Wswitch-default" #pragma GCC diagnostic ignored "-Wunused-function" #pragma GCC diagnostic ignored "-Wunused-macros" #pragma GCC diagnostic ignored "-Wunused-parameter" +#endif +#if ((__GNUC__ * 100) + __GNUC_MINOR__) >= 600 +#pragma GCC diagnostic ignored "-Wnull-dereference" +#endif #elif defined __SUNPRO_CC #pragma disable_warn #elif defined _MSC_VER #pragma warning(push, 1) #endif -#line 2 "H5LTanalyze.c" +#line 2 "hl/src/H5LTanalyze.c" -#line 4 "H5LTanalyze.c" +#line 4 "hl/src/H5LTanalyze.c" #define YY_INT_ALIGNED short int @@ -47,7 +56,7 @@ #define FLEX_SCANNER #define YY_FLEX_MAJOR_VERSION 2 #define YY_FLEX_MINOR_VERSION 5 -#define YY_FLEX_SUBMINOR_VERSION 37 +#define YY_FLEX_SUBMINOR_VERSION 35 #if YY_FLEX_SUBMINOR_VERSION > 0 #define FLEX_BETA #endif @@ -85,6 +94,7 @@ typedef int16_t flex_int16_t; typedef uint16_t flex_uint16_t; typedef int32_t flex_int32_t; typedef uint32_t flex_uint32_t; +typedef uint64_t flex_uint64_t; #else typedef signed char flex_int8_t; typedef short int flex_int16_t; @@ -92,6 +102,7 @@ typedef int flex_int32_t; typedef unsigned char flex_uint8_t; typedef unsigned short int flex_uint16_t; typedef unsigned int flex_uint32_t; +#endif /* ! C99 */ /* Limits of integral types. */ #ifndef INT8_MIN @@ -122,8 +133,6 @@ typedef unsigned int flex_uint32_t; #define UINT32_MAX (4294967295U) #endif -#endif /* ! C99 */ - #endif /* ! FLEXINT_H */ #ifdef __cplusplus @@ -394,7 +403,7 @@ static void yy_fatal_error (yyconst char msg[] ); */ #define YY_DO_BEFORE_ACTION \ (yytext_ptr) = yy_bp; \ - H5LTyyleng = (size_t) (yy_cp - yy_bp); \ + H5LTyyleng = (yy_size_t) (yy_cp - yy_bp); \ (yy_hold_char) = *yy_cp; \ *yy_cp = '\0'; \ (yy_c_buf_p) = yy_cp; @@ -863,7 +872,7 @@ goto find_rule; \ #define YY_MORE_ADJ 0 #define YY_RESTORE_YY_MORE_OFFSET char *H5LTyytext; -#line 1 "H5LTanalyze.l" +#line 1 "hl/src/H5LTanalyze.l" /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * Copyright by the Board of Trustees of the University of Illinois. * @@ -872,11 +881,16 @@ char *H5LTyytext; * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#line 15 "H5LTanalyze.l" +/* NOTE! + * + * If you make any changes to H5LTanalyze.l, please run bin/genparser to + * recreate the output files. + */ +#line 21 "hl/src/H5LTanalyze.l" #include <stdlib.h> #include <string.h> #include <hdf5.h> @@ -930,7 +944,7 @@ extern hbool_t is_opq_tag; hbool_t first_quote = 1; -#line 915 "H5LTanalyze.c" +#line 920 "hl/src/H5LTanalyze.c" #define INITIAL 0 #define TAG_STRING 1 @@ -1012,7 +1026,7 @@ static int input (void ); /* This used to be an fputs(), but since the string might contain NUL's, * we now use fwrite(). */ -#define ECHO do { if (fwrite( H5LTyytext, H5LTyyleng, 1, H5LTyyout )) {} } while (0) +#define ECHO fwrite( H5LTyytext, H5LTyyleng, 1, H5LTyyout ) #endif /* Gets input and stuffs it into "buf". number of characters read, or YY_NULL, @@ -1023,7 +1037,7 @@ static int input (void ); if ( YY_CURRENT_BUFFER_LVALUE->yy_is_interactive ) \ { \ int c = '*'; \ - size_t n; \ + yy_size_t n; \ for ( n = 0; n < max_size && \ (c = getc( H5LTyyin )) != EOF && c != '\n'; ++n ) \ buf[n] = (char) c; \ @@ -1105,10 +1119,10 @@ YY_DECL register char *yy_cp, *yy_bp; register int yy_act; -#line 71 "H5LTanalyze.l" +#line 77 "hl/src/H5LTanalyze.l" -#line 1093 "H5LTanalyze.c" +#line 1098 "hl/src/H5LTanalyze.c" if ( !(yy_init) ) { @@ -1178,6 +1192,7 @@ yy_match: yy_find_action: yy_current_state = *--(yy_state_ptr); (yy_lp) = yy_accept[yy_current_state]; +goto find_rule; /* Shut up GCC warning -Wall */ find_rule: /* we branch to this label when backing up */ for ( ; ; ) /* until we find what rule we matched */ { @@ -1202,293 +1217,293 @@ do_action: /* This label is used only to access EOF actions. */ { /* beginning of action switch */ case 1: YY_RULE_SETUP -#line 73 "H5LTanalyze.l" +#line 79 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_I8BE_TOKEN);} YY_BREAK case 2: YY_RULE_SETUP -#line 74 "H5LTanalyze.l" +#line 80 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_I8LE_TOKEN);} YY_BREAK case 3: YY_RULE_SETUP -#line 75 "H5LTanalyze.l" +#line 81 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_I16BE_TOKEN);} YY_BREAK case 4: YY_RULE_SETUP -#line 76 "H5LTanalyze.l" +#line 82 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_I16LE_TOKEN);} YY_BREAK case 5: YY_RULE_SETUP -#line 77 "H5LTanalyze.l" +#line 83 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_I32BE_TOKEN);} YY_BREAK case 6: YY_RULE_SETUP -#line 78 "H5LTanalyze.l" +#line 84 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_I32LE_TOKEN);} YY_BREAK case 7: YY_RULE_SETUP -#line 79 "H5LTanalyze.l" +#line 85 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_I64BE_TOKEN);} YY_BREAK case 8: YY_RULE_SETUP -#line 80 "H5LTanalyze.l" +#line 86 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_I64LE_TOKEN);} YY_BREAK case 9: YY_RULE_SETUP -#line 82 "H5LTanalyze.l" +#line 88 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_U8BE_TOKEN);} YY_BREAK case 10: YY_RULE_SETUP -#line 83 "H5LTanalyze.l" +#line 89 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_U8LE_TOKEN);} YY_BREAK case 11: YY_RULE_SETUP -#line 84 "H5LTanalyze.l" +#line 90 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_U16BE_TOKEN);} YY_BREAK case 12: YY_RULE_SETUP -#line 85 "H5LTanalyze.l" +#line 91 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_U16LE_TOKEN);} YY_BREAK case 13: YY_RULE_SETUP -#line 86 "H5LTanalyze.l" +#line 92 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_U32BE_TOKEN);} YY_BREAK case 14: YY_RULE_SETUP -#line 87 "H5LTanalyze.l" +#line 93 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_U32LE_TOKEN);} YY_BREAK case 15: YY_RULE_SETUP -#line 88 "H5LTanalyze.l" +#line 94 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_U64BE_TOKEN);} YY_BREAK case 16: YY_RULE_SETUP -#line 89 "H5LTanalyze.l" +#line 95 "hl/src/H5LTanalyze.l" {return hid(H5T_STD_U64LE_TOKEN);} YY_BREAK case 17: YY_RULE_SETUP -#line 91 "H5LTanalyze.l" +#line 97 "hl/src/H5LTanalyze.l" {return hid(H5T_NATIVE_CHAR_TOKEN);} YY_BREAK case 18: YY_RULE_SETUP -#line 92 "H5LTanalyze.l" +#line 98 "hl/src/H5LTanalyze.l" {return hid(H5T_NATIVE_SCHAR_TOKEN);} YY_BREAK case 19: YY_RULE_SETUP -#line 93 "H5LTanalyze.l" +#line 99 "hl/src/H5LTanalyze.l" {return hid(H5T_NATIVE_UCHAR_TOKEN);} YY_BREAK case 20: YY_RULE_SETUP -#line 94 "H5LTanalyze.l" +#line 100 "hl/src/H5LTanalyze.l" {return hid(H5T_NATIVE_SHORT_TOKEN);} YY_BREAK case 21: YY_RULE_SETUP -#line 95 "H5LTanalyze.l" +#line 101 "hl/src/H5LTanalyze.l" {return hid(H5T_NATIVE_USHORT_TOKEN);} YY_BREAK case 22: YY_RULE_SETUP -#line 96 "H5LTanalyze.l" +#line 102 "hl/src/H5LTanalyze.l" {return hid(H5T_NATIVE_INT_TOKEN);} YY_BREAK case 23: YY_RULE_SETUP -#line 97 "H5LTanalyze.l" +#line 103 "hl/src/H5LTanalyze.l" {return hid(H5T_NATIVE_UINT_TOKEN);} YY_BREAK case 24: YY_RULE_SETUP -#line 98 "H5LTanalyze.l" +#line 104 "hl/src/H5LTanalyze.l" {return hid(H5T_NATIVE_LONG_TOKEN);} YY_BREAK case 25: YY_RULE_SETUP -#line 99 "H5LTanalyze.l" +#line 105 "hl/src/H5LTanalyze.l" {return hid(H5T_NATIVE_ULONG_TOKEN);} YY_BREAK case 26: YY_RULE_SETUP -#line 100 "H5LTanalyze.l" +#line 106 "hl/src/H5LTanalyze.l" {return hid(H5T_NATIVE_LLONG_TOKEN);} YY_BREAK case 27: YY_RULE_SETUP -#line 101 "H5LTanalyze.l" +#line 107 "hl/src/H5LTanalyze.l" {return hid(H5T_NATIVE_ULLONG_TOKEN);} YY_BREAK case 28: YY_RULE_SETUP -#line 103 "H5LTanalyze.l" +#line 109 "hl/src/H5LTanalyze.l" {return hid(H5T_IEEE_F32BE_TOKEN);} YY_BREAK case 29: YY_RULE_SETUP -#line 104 "H5LTanalyze.l" +#line 110 "hl/src/H5LTanalyze.l" {return hid(H5T_IEEE_F32LE_TOKEN);} YY_BREAK case 30: YY_RULE_SETUP -#line 105 "H5LTanalyze.l" +#line 111 "hl/src/H5LTanalyze.l" {return hid(H5T_IEEE_F64BE_TOKEN);} YY_BREAK case 31: YY_RULE_SETUP -#line 106 "H5LTanalyze.l" +#line 112 "hl/src/H5LTanalyze.l" {return hid(H5T_IEEE_F64LE_TOKEN);} YY_BREAK case 32: YY_RULE_SETUP -#line 107 "H5LTanalyze.l" +#line 113 "hl/src/H5LTanalyze.l" {return hid(H5T_NATIVE_FLOAT_TOKEN);} YY_BREAK case 33: YY_RULE_SETUP -#line 108 "H5LTanalyze.l" +#line 114 "hl/src/H5LTanalyze.l" {return hid(H5T_NATIVE_DOUBLE_TOKEN);} YY_BREAK case 34: YY_RULE_SETUP -#line 109 "H5LTanalyze.l" +#line 115 "hl/src/H5LTanalyze.l" {return hid(H5T_NATIVE_LDOUBLE_TOKEN);} YY_BREAK case 35: YY_RULE_SETUP -#line 111 "H5LTanalyze.l" +#line 117 "hl/src/H5LTanalyze.l" {return token(H5T_STRING_TOKEN);} YY_BREAK case 36: YY_RULE_SETUP -#line 112 "H5LTanalyze.l" +#line 118 "hl/src/H5LTanalyze.l" {return token(STRSIZE_TOKEN);} YY_BREAK case 37: YY_RULE_SETUP -#line 113 "H5LTanalyze.l" +#line 119 "hl/src/H5LTanalyze.l" {return token(STRPAD_TOKEN);} YY_BREAK case 38: YY_RULE_SETUP -#line 114 "H5LTanalyze.l" +#line 120 "hl/src/H5LTanalyze.l" {return token(CSET_TOKEN);} YY_BREAK case 39: YY_RULE_SETUP -#line 115 "H5LTanalyze.l" +#line 121 "hl/src/H5LTanalyze.l" {return token(CTYPE_TOKEN);} YY_BREAK case 40: YY_RULE_SETUP -#line 116 "H5LTanalyze.l" -{return token(H5T_STR_NULLTERM_TOKEN);} +#line 122 "hl/src/H5LTanalyze.l" +{return token(H5T_STR_NULLTERM_TOKEN);} YY_BREAK case 41: YY_RULE_SETUP -#line 117 "H5LTanalyze.l" -{return token(H5T_STR_NULLPAD_TOKEN);} +#line 123 "hl/src/H5LTanalyze.l" +{return token(H5T_STR_NULLPAD_TOKEN);} YY_BREAK case 42: YY_RULE_SETUP -#line 118 "H5LTanalyze.l" -{return token(H5T_STR_SPACEPAD_TOKEN);} +#line 124 "hl/src/H5LTanalyze.l" +{return token(H5T_STR_SPACEPAD_TOKEN);} YY_BREAK case 43: YY_RULE_SETUP -#line 119 "H5LTanalyze.l" +#line 125 "hl/src/H5LTanalyze.l" {return token(H5T_CSET_ASCII_TOKEN);} YY_BREAK case 44: YY_RULE_SETUP -#line 120 "H5LTanalyze.l" +#line 126 "hl/src/H5LTanalyze.l" {return token(H5T_CSET_UTF8_TOKEN);} YY_BREAK case 45: YY_RULE_SETUP -#line 121 "H5LTanalyze.l" +#line 127 "hl/src/H5LTanalyze.l" {return token(H5T_C_S1_TOKEN);} YY_BREAK case 46: YY_RULE_SETUP -#line 122 "H5LTanalyze.l" +#line 128 "hl/src/H5LTanalyze.l" {return token(H5T_FORTRAN_S1_TOKEN);} YY_BREAK case 47: YY_RULE_SETUP -#line 123 "H5LTanalyze.l" +#line 129 "hl/src/H5LTanalyze.l" {return token(H5T_VARIABLE_TOKEN);} YY_BREAK case 48: YY_RULE_SETUP -#line 125 "H5LTanalyze.l" +#line 131 "hl/src/H5LTanalyze.l" {return token(H5T_COMPOUND_TOKEN);} YY_BREAK case 49: YY_RULE_SETUP -#line 126 "H5LTanalyze.l" +#line 132 "hl/src/H5LTanalyze.l" {return token(H5T_ENUM_TOKEN);} YY_BREAK case 50: YY_RULE_SETUP -#line 127 "H5LTanalyze.l" +#line 133 "hl/src/H5LTanalyze.l" {return token(H5T_ARRAY_TOKEN);} YY_BREAK case 51: YY_RULE_SETUP -#line 128 "H5LTanalyze.l" +#line 134 "hl/src/H5LTanalyze.l" {return token(H5T_VLEN_TOKEN);} YY_BREAK case 52: YY_RULE_SETUP -#line 130 "H5LTanalyze.l" +#line 136 "hl/src/H5LTanalyze.l" {return token(H5T_OPAQUE_TOKEN);} YY_BREAK case 53: YY_RULE_SETUP -#line 131 "H5LTanalyze.l" +#line 137 "hl/src/H5LTanalyze.l" {return token(OPQ_SIZE_TOKEN);} YY_BREAK case 54: YY_RULE_SETUP -#line 132 "H5LTanalyze.l" +#line 138 "hl/src/H5LTanalyze.l" {return token(OPQ_TAG_TOKEN);} YY_BREAK case 55: YY_RULE_SETUP -#line 134 "H5LTanalyze.l" -{ - if( is_str_size || (is_enum && is_enum_memb) || +#line 140 "hl/src/H5LTanalyze.l" +{ + if( is_str_size || (is_enum && is_enum_memb) || is_opq_size || (asindex>-1 && arr_stack[asindex].is_dim) || (csindex>-1 && cmpd_stack[csindex].is_field) ) { H5LTyylval.ival = atoi(H5LTyytext); - return NUMBER; + return NUMBER; } else REJECT; } YY_BREAK case 56: YY_RULE_SETUP -#line 144 "H5LTanalyze.l" +#line 150 "hl/src/H5LTanalyze.l" { /*if it's first quote, and is a compound field name or an enum symbol*/ - if((is_opq_tag || is_enum || (csindex>-1 && cmpd_stack[csindex].is_field)) + if((is_opq_tag || is_enum || (csindex>-1 && cmpd_stack[csindex].is_field)) && first_quote) { first_quote = 0; BEGIN TAG_STRING; @@ -1500,7 +1515,7 @@ YY_RULE_SETUP case 57: /* rule 57 can match eol */ YY_RULE_SETUP -#line 154 "H5LTanalyze.l" +#line 160 "hl/src/H5LTanalyze.l" { #ifdef H5_HAVE_WIN32_API H5LTyylval.sval = _strdup(H5LTyytext); @@ -1513,52 +1528,52 @@ YY_RULE_SETUP YY_BREAK case 58: YY_RULE_SETUP -#line 164 "H5LTanalyze.l" +#line 170 "hl/src/H5LTanalyze.l" {return token('{');} YY_BREAK case 59: YY_RULE_SETUP -#line 165 "H5LTanalyze.l" +#line 171 "hl/src/H5LTanalyze.l" {return token('}');} YY_BREAK case 60: YY_RULE_SETUP -#line 166 "H5LTanalyze.l" +#line 172 "hl/src/H5LTanalyze.l" {return token('[');} YY_BREAK case 61: YY_RULE_SETUP -#line 167 "H5LTanalyze.l" +#line 173 "hl/src/H5LTanalyze.l" {return token(']');} YY_BREAK case 62: YY_RULE_SETUP -#line 168 "H5LTanalyze.l" +#line 174 "hl/src/H5LTanalyze.l" {return token(':');} YY_BREAK case 63: YY_RULE_SETUP -#line 169 "H5LTanalyze.l" +#line 175 "hl/src/H5LTanalyze.l" {return token(';');} YY_BREAK case 64: /* rule 64 can match eol */ YY_RULE_SETUP -#line 170 "H5LTanalyze.l" +#line 176 "hl/src/H5LTanalyze.l" ; YY_BREAK case 65: /* rule 65 can match eol */ YY_RULE_SETUP -#line 171 "H5LTanalyze.l" +#line 177 "hl/src/H5LTanalyze.l" { return 0; } YY_BREAK case 66: YY_RULE_SETUP -#line 173 "H5LTanalyze.l" +#line 179 "hl/src/H5LTanalyze.l" ECHO; YY_BREAK -#line 1543 "H5LTanalyze.c" +#line 1549 "hl/src/H5LTanalyze.c" case YY_STATE_EOF(INITIAL): case YY_STATE_EOF(TAG_STRING): yyterminate(); @@ -1851,7 +1866,7 @@ static int yy_get_next_buffer (void) if ( ! yy_is_jam ) *(yy_state_ptr)++ = yy_current_state; - return yy_is_jam ? 0 : yy_current_state; + return yy_is_jam ? 0 : yy_current_state; } static void yyunput (int c, register char * yy_bp ) @@ -1939,7 +1954,7 @@ static int yy_get_next_buffer (void) case EOB_ACT_END_OF_FILE: { if ( H5LTyywrap( ) ) - return EOF; + return 0; if ( ! (yy_did_buffer_switch_on_eof) ) YY_NEW_FILE; @@ -2075,6 +2090,10 @@ static void H5LTyy_load_buffer_state (void) H5LTyyfree((void *) b ); } +#ifndef __cplusplus +extern int isatty (int ); +#endif /* __cplusplus */ + /* Initializes or reinitializes a buffer. * This function is sometimes called more than once on the same buffer, * such as during a H5LTyyrestart() or at EOF. @@ -2279,8 +2298,8 @@ YY_BUFFER_STATE H5LTyy_scan_string (yyconst char * yystr ) /** Setup the input buffer state to scan the given bytes. The next call to H5LTyylex() will * scan from a @e copy of @a bytes. - * @param yybytes the byte buffer to scan - * @param _yybytes_len the number of bytes in the buffer pointed to by @a bytes. + * @param bytes the byte buffer to scan + * @param len the number of bytes in the buffer pointed to by @a bytes. * * @return the newly allocated buffer state object. */ @@ -2288,8 +2307,7 @@ YY_BUFFER_STATE H5LTyy_scan_bytes (yyconst char * yybytes, yy_size_t _yybytes_ { YY_BUFFER_STATE b; char *buf; - yy_size_t n; - int i; + yy_size_t n, i; /* Get memory for full buffer, including space for trailing EOB's. */ n = _yybytes_len + 2; @@ -2527,14 +2545,14 @@ void H5LTyyfree (void * ptr ) #define YYTABLES_NAME "yytables" -#line 173 "H5LTanalyze.l" +#line 179 "hl/src/H5LTanalyze.l" int my_yyinput(char *buf, int max_size) { int ret; - - memcpy(buf, myinput, input_len); + + memcpy(buf, myinput, input_len); ret = (int)input_len; return ret; } diff --git a/hl/src/H5LTanalyze.l b/hl/src/H5LTanalyze.l index 0470d9f..49fc039 100644 --- a/hl/src/H5LTanalyze.l +++ b/hl/src/H5LTanalyze.l @@ -6,11 +6,17 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ +/* NOTE! + * + * If you make any changes to H5LTanalyze.l, please run bin/genparser to + * recreate the output files. + */ + %{ #include <stdlib.h> #include <string.h> @@ -113,9 +119,9 @@ STRSIZE {return token(STRSIZE_TOKEN);} STRPAD {return token(STRPAD_TOKEN);} CSET {return token(CSET_TOKEN);} CTYPE {return token(CTYPE_TOKEN);} -H5T_STR_NULLTERM {return token(H5T_STR_NULLTERM_TOKEN);} -H5T_STR_NULLPAD {return token(H5T_STR_NULLPAD_TOKEN);} -H5T_STR_SPACEPAD {return token(H5T_STR_SPACEPAD_TOKEN);} +H5T_STR_NULLTERM {return token(H5T_STR_NULLTERM_TOKEN);} +H5T_STR_NULLPAD {return token(H5T_STR_NULLPAD_TOKEN);} +H5T_STR_SPACEPAD {return token(H5T_STR_SPACEPAD_TOKEN);} H5T_CSET_ASCII {return token(H5T_CSET_ASCII_TOKEN);} H5T_CSET_UTF8 {return token(H5T_CSET_UTF8_TOKEN);} H5T_C_S1 {return token(H5T_C_S1_TOKEN);} @@ -131,19 +137,19 @@ H5T_OPAQUE {return token(H5T_OPAQUE_TOKEN);} OPQ_SIZE {return token(OPQ_SIZE_TOKEN);} OPQ_TAG {return token(OPQ_TAG_TOKEN);} -[0-9]+ { - if( is_str_size || (is_enum && is_enum_memb) || +[0-9]+ { + if( is_str_size || (is_enum && is_enum_memb) || is_opq_size || (asindex>-1 && arr_stack[asindex].is_dim) || (csindex>-1 && cmpd_stack[csindex].is_field) ) { H5LTyylval.ival = atoi(yytext); - return NUMBER; + return NUMBER; } else REJECT; } "\"" { /*if it's first quote, and is a compound field name or an enum symbol*/ - if((is_opq_tag || is_enum || (csindex>-1 && cmpd_stack[csindex].is_field)) + if((is_opq_tag || is_enum || (csindex>-1 && cmpd_stack[csindex].is_field)) && first_quote) { first_quote = 0; BEGIN TAG_STRING; @@ -160,7 +166,7 @@ OPQ_TAG {return token(OPQ_TAG_TOKEN);} BEGIN INITIAL; return STRING; } - + "{" {return token('{');} "}" {return token('}');} "[" {return token('[');} @@ -174,8 +180,8 @@ OPQ_TAG {return token(OPQ_TAG_TOKEN);} int my_yyinput(char *buf, int max_size) { int ret; - - memcpy(buf, myinput, input_len); + + memcpy(buf, myinput, input_len); ret = (int)input_len; return ret; } diff --git a/hl/src/H5LTparse.c b/hl/src/H5LTparse.c index 16a0bcf..80de0a2 100644 --- a/hl/src/H5LTparse.c +++ b/hl/src/H5LTparse.c @@ -1,38 +1,48 @@ -#if __GNUC__ >= 4 && __GNUC_MINOR__ >=2 +#if defined (__GNUC__) +#if ((__GNUC__ * 100) + __GNUC_MINOR__) >= 402 #pragma GCC diagnostic ignored "-Wconversion" #pragma GCC diagnostic ignored "-Wimplicit-function-declaration" #pragma GCC diagnostic ignored "-Wlarger-than=" #pragma GCC diagnostic ignored "-Wmissing-prototypes" #pragma GCC diagnostic ignored "-Wnested-externs" #pragma GCC diagnostic ignored "-Wold-style-definition" +#pragma GCC diagnostic ignored "-Wredundant-decls" #pragma GCC diagnostic ignored "-Wsign-compare" #pragma GCC diagnostic ignored "-Wsign-conversion" +#pragma GCC diagnostic ignored "-Wstrict-overflow" #pragma GCC diagnostic ignored "-Wstrict-prototypes" +#pragma GCC diagnostic ignored "-Wsuggest-attribute=const" +#pragma GCC diagnostic ignored "-Wsuggest-attribute=pure" #pragma GCC diagnostic ignored "-Wswitch-default" #pragma GCC diagnostic ignored "-Wunused-function" #pragma GCC diagnostic ignored "-Wunused-macros" #pragma GCC diagnostic ignored "-Wunused-parameter" +#endif +#if ((__GNUC__ * 100) + __GNUC_MINOR__) >= 600 +#pragma GCC diagnostic ignored "-Wnull-dereference" +#endif #elif defined __SUNPRO_CC #pragma disable_warn #elif defined _MSC_VER #pragma warning(push, 1) #endif -/* A Bison parser, made by GNU Bison 2.7. */ +/* A Bison parser, made by GNU Bison 3.7.2. */ /* Bison implementation for Yacc-like parsers in C - - Copyright (C) 1984, 1989-1990, 2000-2012 Free Software Foundation, Inc. - + + Copyright (C) 1984, 1989-1990, 2000-2015, 2018-2020 Free Software Foundation, + Inc. + This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. - + This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. - + You should have received a copy of the GNU General Public License along with this program. If not, see <http://www.gnu.org/licenses/>. */ @@ -45,13 +55,17 @@ special exception, which will cause the skeleton and the resulting Bison output files to be licensed under the GNU General Public License without this special exception. - + This special exception was added by the Free Software Foundation in version 2.2 of Bison. */ /* C LALR(1) parser skeleton written by Richard Stallman, by simplifying the original so-called "semantic" parser. */ +/* DO NOT RELY ON FEATURES THAT ARE NOT DOCUMENTED in the manual, + especially those whose name start with YY_ or yy_. They are + private implementation details that can be changed or removed. */ + /* All symbols defined below should begin with yy or YY, to avoid infringing on user name space. This should be done even for local variables, as they might otherwise be expanded by user macros. @@ -63,7 +77,7 @@ #define YYBISON 1 /* Bison version. */ -#define YYBISON_VERSION "2.7" +#define YYBISON_VERSION "3.7.2" /* Skeleton name. */ #define YYSKELETON_NAME "yacc.c" @@ -82,14 +96,13 @@ #define yyparse H5LTyyparse #define yylex H5LTyylex #define yyerror H5LTyyerror -#define yylval H5LTyylval -#define yychar H5LTyychar #define yydebug H5LTyydebug #define yynerrs H5LTyynerrs +#define yylval H5LTyylval +#define yychar H5LTyychar -/* Copy the first part of user declarations. */ -/* Line 371 of yacc.c */ -#line 14 "H5LTparse.y" +/* First part of user prologue. */ +#line 20 "hl/src/H5LTparse.y" #include <stdio.h> #include <string.h> @@ -142,174 +155,225 @@ hbool_t is_opq_size = 0; /*flag to lexer for opaque type size*/ hbool_t is_opq_tag = 0; /*flag to lexer for opaque type tag*/ -/* Line 371 of yacc.c */ -#line 128 "H5LTparse.c" +#line 131 "hl/src/H5LTparse.c" -# ifndef YY_NULL -# if defined __cplusplus && 201103L <= __cplusplus -# define YY_NULL nullptr +# ifndef YY_CAST +# ifdef __cplusplus +# define YY_CAST(Type, Val) static_cast<Type> (Val) +# define YY_REINTERPRET_CAST(Type, Val) reinterpret_cast<Type> (Val) # else -# define YY_NULL 0 +# define YY_CAST(Type, Val) ((Type) (Val)) +# define YY_REINTERPRET_CAST(Type, Val) ((Type) (Val)) +# endif +# endif +# ifndef YY_NULLPTR +# if defined __cplusplus +# if 201103L <= __cplusplus +# define YY_NULLPTR nullptr +# else +# define YY_NULLPTR 0 +# endif +# else +# define YY_NULLPTR ((void*)0) # endif # endif -/* Enabling verbose error messages. */ -#ifdef YYERROR_VERBOSE -# undef YYERROR_VERBOSE -# define YYERROR_VERBOSE 1 -#else -# define YYERROR_VERBOSE 0 -#endif - -/* In a future release of Bison, this section will be replaced - by #include "H5LTparse.h". */ -#ifndef YY_H5LTYY_H5LTPARSE_H_INCLUDED -# define YY_H5LTYY_H5LTPARSE_H_INCLUDED -/* Enabling traces. */ -#ifndef YYDEBUG -# define YYDEBUG 0 -#endif -#if YYDEBUG -extern int H5LTyydebug; -#endif - -/* Tokens. */ -#ifndef YYTOKENTYPE -# define YYTOKENTYPE - /* Put the tokens into the symbol table, so that GDB and other debuggers - know about them. */ - enum yytokentype { - H5T_STD_I8BE_TOKEN = 258, - H5T_STD_I8LE_TOKEN = 259, - H5T_STD_I16BE_TOKEN = 260, - H5T_STD_I16LE_TOKEN = 261, - H5T_STD_I32BE_TOKEN = 262, - H5T_STD_I32LE_TOKEN = 263, - H5T_STD_I64BE_TOKEN = 264, - H5T_STD_I64LE_TOKEN = 265, - H5T_STD_U8BE_TOKEN = 266, - H5T_STD_U8LE_TOKEN = 267, - H5T_STD_U16BE_TOKEN = 268, - H5T_STD_U16LE_TOKEN = 269, - H5T_STD_U32BE_TOKEN = 270, - H5T_STD_U32LE_TOKEN = 271, - H5T_STD_U64BE_TOKEN = 272, - H5T_STD_U64LE_TOKEN = 273, - H5T_NATIVE_CHAR_TOKEN = 274, - H5T_NATIVE_SCHAR_TOKEN = 275, - H5T_NATIVE_UCHAR_TOKEN = 276, - H5T_NATIVE_SHORT_TOKEN = 277, - H5T_NATIVE_USHORT_TOKEN = 278, - H5T_NATIVE_INT_TOKEN = 279, - H5T_NATIVE_UINT_TOKEN = 280, - H5T_NATIVE_LONG_TOKEN = 281, - H5T_NATIVE_ULONG_TOKEN = 282, - H5T_NATIVE_LLONG_TOKEN = 283, - H5T_NATIVE_ULLONG_TOKEN = 284, - H5T_IEEE_F32BE_TOKEN = 285, - H5T_IEEE_F32LE_TOKEN = 286, - H5T_IEEE_F64BE_TOKEN = 287, - H5T_IEEE_F64LE_TOKEN = 288, - H5T_NATIVE_FLOAT_TOKEN = 289, - H5T_NATIVE_DOUBLE_TOKEN = 290, - H5T_NATIVE_LDOUBLE_TOKEN = 291, - H5T_STRING_TOKEN = 292, - STRSIZE_TOKEN = 293, - STRPAD_TOKEN = 294, - CSET_TOKEN = 295, - CTYPE_TOKEN = 296, - H5T_VARIABLE_TOKEN = 297, - H5T_STR_NULLTERM_TOKEN = 298, - H5T_STR_NULLPAD_TOKEN = 299, - H5T_STR_SPACEPAD_TOKEN = 300, - H5T_CSET_ASCII_TOKEN = 301, - H5T_CSET_UTF8_TOKEN = 302, - H5T_C_S1_TOKEN = 303, - H5T_FORTRAN_S1_TOKEN = 304, - H5T_OPAQUE_TOKEN = 305, - OPQ_SIZE_TOKEN = 306, - OPQ_TAG_TOKEN = 307, - H5T_COMPOUND_TOKEN = 308, - H5T_ENUM_TOKEN = 309, - H5T_ARRAY_TOKEN = 310, - H5T_VLEN_TOKEN = 311, - STRING = 312, - NUMBER = 313 - }; -#endif - - -#if ! defined YYSTYPE && ! defined YYSTYPE_IS_DECLARED -typedef union YYSTYPE +#include "H5LTparse.h" +/* Symbol kind. */ +enum yysymbol_kind_t { -/* Line 387 of yacc.c */ -#line 66 "H5LTparse.y" - - int ival; /*for integer token*/ - char *sval; /*for name string*/ - hid_t hid; /*for hid_t token*/ + YYSYMBOL_YYEMPTY = -2, + YYSYMBOL_YYEOF = 0, /* "end of file" */ + YYSYMBOL_YYerror = 1, /* error */ + YYSYMBOL_YYUNDEF = 2, /* "invalid token" */ + YYSYMBOL_H5T_STD_I8BE_TOKEN = 3, /* H5T_STD_I8BE_TOKEN */ + YYSYMBOL_H5T_STD_I8LE_TOKEN = 4, /* H5T_STD_I8LE_TOKEN */ + YYSYMBOL_H5T_STD_I16BE_TOKEN = 5, /* H5T_STD_I16BE_TOKEN */ + YYSYMBOL_H5T_STD_I16LE_TOKEN = 6, /* H5T_STD_I16LE_TOKEN */ + YYSYMBOL_H5T_STD_I32BE_TOKEN = 7, /* H5T_STD_I32BE_TOKEN */ + YYSYMBOL_H5T_STD_I32LE_TOKEN = 8, /* H5T_STD_I32LE_TOKEN */ + YYSYMBOL_H5T_STD_I64BE_TOKEN = 9, /* H5T_STD_I64BE_TOKEN */ + YYSYMBOL_H5T_STD_I64LE_TOKEN = 10, /* H5T_STD_I64LE_TOKEN */ + YYSYMBOL_H5T_STD_U8BE_TOKEN = 11, /* H5T_STD_U8BE_TOKEN */ + YYSYMBOL_H5T_STD_U8LE_TOKEN = 12, /* H5T_STD_U8LE_TOKEN */ + YYSYMBOL_H5T_STD_U16BE_TOKEN = 13, /* H5T_STD_U16BE_TOKEN */ + YYSYMBOL_H5T_STD_U16LE_TOKEN = 14, /* H5T_STD_U16LE_TOKEN */ + YYSYMBOL_H5T_STD_U32BE_TOKEN = 15, /* H5T_STD_U32BE_TOKEN */ + YYSYMBOL_H5T_STD_U32LE_TOKEN = 16, /* H5T_STD_U32LE_TOKEN */ + YYSYMBOL_H5T_STD_U64BE_TOKEN = 17, /* H5T_STD_U64BE_TOKEN */ + YYSYMBOL_H5T_STD_U64LE_TOKEN = 18, /* H5T_STD_U64LE_TOKEN */ + YYSYMBOL_H5T_NATIVE_CHAR_TOKEN = 19, /* H5T_NATIVE_CHAR_TOKEN */ + YYSYMBOL_H5T_NATIVE_SCHAR_TOKEN = 20, /* H5T_NATIVE_SCHAR_TOKEN */ + YYSYMBOL_H5T_NATIVE_UCHAR_TOKEN = 21, /* H5T_NATIVE_UCHAR_TOKEN */ + YYSYMBOL_H5T_NATIVE_SHORT_TOKEN = 22, /* H5T_NATIVE_SHORT_TOKEN */ + YYSYMBOL_H5T_NATIVE_USHORT_TOKEN = 23, /* H5T_NATIVE_USHORT_TOKEN */ + YYSYMBOL_H5T_NATIVE_INT_TOKEN = 24, /* H5T_NATIVE_INT_TOKEN */ + YYSYMBOL_H5T_NATIVE_UINT_TOKEN = 25, /* H5T_NATIVE_UINT_TOKEN */ + YYSYMBOL_H5T_NATIVE_LONG_TOKEN = 26, /* H5T_NATIVE_LONG_TOKEN */ + YYSYMBOL_H5T_NATIVE_ULONG_TOKEN = 27, /* H5T_NATIVE_ULONG_TOKEN */ + YYSYMBOL_H5T_NATIVE_LLONG_TOKEN = 28, /* H5T_NATIVE_LLONG_TOKEN */ + YYSYMBOL_H5T_NATIVE_ULLONG_TOKEN = 29, /* H5T_NATIVE_ULLONG_TOKEN */ + YYSYMBOL_H5T_IEEE_F32BE_TOKEN = 30, /* H5T_IEEE_F32BE_TOKEN */ + YYSYMBOL_H5T_IEEE_F32LE_TOKEN = 31, /* H5T_IEEE_F32LE_TOKEN */ + YYSYMBOL_H5T_IEEE_F64BE_TOKEN = 32, /* H5T_IEEE_F64BE_TOKEN */ + YYSYMBOL_H5T_IEEE_F64LE_TOKEN = 33, /* H5T_IEEE_F64LE_TOKEN */ + YYSYMBOL_H5T_NATIVE_FLOAT_TOKEN = 34, /* H5T_NATIVE_FLOAT_TOKEN */ + YYSYMBOL_H5T_NATIVE_DOUBLE_TOKEN = 35, /* H5T_NATIVE_DOUBLE_TOKEN */ + YYSYMBOL_H5T_NATIVE_LDOUBLE_TOKEN = 36, /* H5T_NATIVE_LDOUBLE_TOKEN */ + YYSYMBOL_H5T_STRING_TOKEN = 37, /* H5T_STRING_TOKEN */ + YYSYMBOL_STRSIZE_TOKEN = 38, /* STRSIZE_TOKEN */ + YYSYMBOL_STRPAD_TOKEN = 39, /* STRPAD_TOKEN */ + YYSYMBOL_CSET_TOKEN = 40, /* CSET_TOKEN */ + YYSYMBOL_CTYPE_TOKEN = 41, /* CTYPE_TOKEN */ + YYSYMBOL_H5T_VARIABLE_TOKEN = 42, /* H5T_VARIABLE_TOKEN */ + YYSYMBOL_H5T_STR_NULLTERM_TOKEN = 43, /* H5T_STR_NULLTERM_TOKEN */ + YYSYMBOL_H5T_STR_NULLPAD_TOKEN = 44, /* H5T_STR_NULLPAD_TOKEN */ + YYSYMBOL_H5T_STR_SPACEPAD_TOKEN = 45, /* H5T_STR_SPACEPAD_TOKEN */ + YYSYMBOL_H5T_CSET_ASCII_TOKEN = 46, /* H5T_CSET_ASCII_TOKEN */ + YYSYMBOL_H5T_CSET_UTF8_TOKEN = 47, /* H5T_CSET_UTF8_TOKEN */ + YYSYMBOL_H5T_C_S1_TOKEN = 48, /* H5T_C_S1_TOKEN */ + YYSYMBOL_H5T_FORTRAN_S1_TOKEN = 49, /* H5T_FORTRAN_S1_TOKEN */ + YYSYMBOL_H5T_OPAQUE_TOKEN = 50, /* H5T_OPAQUE_TOKEN */ + YYSYMBOL_OPQ_SIZE_TOKEN = 51, /* OPQ_SIZE_TOKEN */ + YYSYMBOL_OPQ_TAG_TOKEN = 52, /* OPQ_TAG_TOKEN */ + YYSYMBOL_H5T_COMPOUND_TOKEN = 53, /* H5T_COMPOUND_TOKEN */ + YYSYMBOL_H5T_ENUM_TOKEN = 54, /* H5T_ENUM_TOKEN */ + YYSYMBOL_H5T_ARRAY_TOKEN = 55, /* H5T_ARRAY_TOKEN */ + YYSYMBOL_H5T_VLEN_TOKEN = 56, /* H5T_VLEN_TOKEN */ + YYSYMBOL_STRING = 57, /* STRING */ + YYSYMBOL_NUMBER = 58, /* NUMBER */ + YYSYMBOL_59_ = 59, /* '{' */ + YYSYMBOL_60_ = 60, /* '}' */ + YYSYMBOL_61_ = 61, /* '[' */ + YYSYMBOL_62_ = 62, /* ']' */ + YYSYMBOL_63_ = 63, /* '"' */ + YYSYMBOL_64_ = 64, /* ':' */ + YYSYMBOL_65_ = 65, /* ';' */ + YYSYMBOL_YYACCEPT = 66, /* $accept */ + YYSYMBOL_start = 67, /* start */ + YYSYMBOL_ddl_type = 68, /* ddl_type */ + YYSYMBOL_atomic_type = 69, /* atomic_type */ + YYSYMBOL_integer_type = 70, /* integer_type */ + YYSYMBOL_fp_type = 71, /* fp_type */ + YYSYMBOL_compound_type = 72, /* compound_type */ + YYSYMBOL_73_1 = 73, /* $@1 */ + YYSYMBOL_memb_list = 74, /* memb_list */ + YYSYMBOL_memb_def = 75, /* memb_def */ + YYSYMBOL_76_2 = 76, /* $@2 */ + YYSYMBOL_field_name = 77, /* field_name */ + YYSYMBOL_field_offset = 78, /* field_offset */ + YYSYMBOL_offset = 79, /* offset */ + YYSYMBOL_array_type = 80, /* array_type */ + YYSYMBOL_81_3 = 81, /* $@3 */ + YYSYMBOL_dim_list = 82, /* dim_list */ + YYSYMBOL_dim = 83, /* dim */ + YYSYMBOL_84_4 = 84, /* $@4 */ + YYSYMBOL_85_5 = 85, /* $@5 */ + YYSYMBOL_dimsize = 86, /* dimsize */ + YYSYMBOL_vlen_type = 87, /* vlen_type */ + YYSYMBOL_opaque_type = 88, /* opaque_type */ + YYSYMBOL_89_6 = 89, /* $@6 */ + YYSYMBOL_90_7 = 90, /* @7 */ + YYSYMBOL_91_8 = 91, /* $@8 */ + YYSYMBOL_92_9 = 92, /* $@9 */ + YYSYMBOL_opaque_size = 93, /* opaque_size */ + YYSYMBOL_opaque_tag = 94, /* opaque_tag */ + YYSYMBOL_string_type = 95, /* string_type */ + YYSYMBOL_96_10 = 96, /* $@10 */ + YYSYMBOL_97_11 = 97, /* $@11 */ + YYSYMBOL_98_12 = 98, /* $@12 */ + YYSYMBOL_99_13 = 99, /* $@13 */ + YYSYMBOL_100_14 = 100, /* @14 */ + YYSYMBOL_strsize = 101, /* strsize */ + YYSYMBOL_strpad = 102, /* strpad */ + YYSYMBOL_cset = 103, /* cset */ + YYSYMBOL_ctype = 104, /* ctype */ + YYSYMBOL_enum_type = 105, /* enum_type */ + YYSYMBOL_106_15 = 106, /* $@15 */ + YYSYMBOL_enum_list = 107, /* enum_list */ + YYSYMBOL_enum_def = 108, /* enum_def */ + YYSYMBOL_109_16 = 109, /* $@16 */ + YYSYMBOL_enum_symbol = 110, /* enum_symbol */ + YYSYMBOL_enum_val = 111 /* enum_val */ +}; +typedef enum yysymbol_kind_t yysymbol_kind_t; -/* Line 387 of yacc.c */ -#line 236 "H5LTparse.c" -} YYSTYPE; -# define YYSTYPE_IS_TRIVIAL 1 -# define yystype YYSTYPE /* obsolescent; will be withdrawn */ -# define YYSTYPE_IS_DECLARED 1 -#endif -extern YYSTYPE H5LTyylval; -#ifdef YYPARSE_PARAM -#if defined __STDC__ || defined __cplusplus -hid_t H5LTyyparse (void *YYPARSE_PARAM); -#else -hid_t H5LTyyparse (); -#endif -#else /* ! YYPARSE_PARAM */ -#if defined __STDC__ || defined __cplusplus -hid_t H5LTyyparse (void); -#else -hid_t H5LTyyparse (); +#ifdef short +# undef short #endif -#endif /* ! YYPARSE_PARAM */ -#endif /* !YY_H5LTYY_H5LTPARSE_H_INCLUDED */ +/* On compilers that do not define __PTRDIFF_MAX__ etc., make sure + <limits.h> and (if available) <stdint.h> are included + so that the code can choose integer types of a good width. */ -/* Copy the second part of user declarations. */ +#ifndef __PTRDIFF_MAX__ +# include <limits.h> /* INFRINGES ON USER NAME SPACE */ +# if defined __STDC_VERSION__ && 199901 <= __STDC_VERSION__ +# include <stdint.h> /* INFRINGES ON USER NAME SPACE */ +# define YY_STDINT_H +# endif +#endif -/* Line 390 of yacc.c */ -#line 264 "H5LTparse.c" +/* Narrow types that promote to a signed type and that can represent a + signed or unsigned integer of at least N bits. In tables they can + save space and decrease cache pressure. Promoting to a signed type + helps avoid bugs in integer arithmetic. */ -#ifdef short -# undef short +#ifdef __INT_LEAST8_MAX__ +typedef __INT_LEAST8_TYPE__ yytype_int8; +#elif defined YY_STDINT_H +typedef int_least8_t yytype_int8; +#else +typedef signed char yytype_int8; #endif -#ifdef YYTYPE_UINT8 -typedef YYTYPE_UINT8 yytype_uint8; +#ifdef __INT_LEAST16_MAX__ +typedef __INT_LEAST16_TYPE__ yytype_int16; +#elif defined YY_STDINT_H +typedef int_least16_t yytype_int16; #else -typedef unsigned char yytype_uint8; +typedef short yytype_int16; #endif -#ifdef YYTYPE_INT8 -typedef YYTYPE_INT8 yytype_int8; -#elif (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) -typedef signed char yytype_int8; +#if defined __UINT_LEAST8_MAX__ && __UINT_LEAST8_MAX__ <= __INT_MAX__ +typedef __UINT_LEAST8_TYPE__ yytype_uint8; +#elif (!defined __UINT_LEAST8_MAX__ && defined YY_STDINT_H \ + && UINT_LEAST8_MAX <= INT_MAX) +typedef uint_least8_t yytype_uint8; +#elif !defined __UINT_LEAST8_MAX__ && UCHAR_MAX <= INT_MAX +typedef unsigned char yytype_uint8; #else -typedef short int yytype_int8; +typedef short yytype_uint8; #endif -#ifdef YYTYPE_UINT16 -typedef YYTYPE_UINT16 yytype_uint16; +#if defined __UINT_LEAST16_MAX__ && __UINT_LEAST16_MAX__ <= __INT_MAX__ +typedef __UINT_LEAST16_TYPE__ yytype_uint16; +#elif (!defined __UINT_LEAST16_MAX__ && defined YY_STDINT_H \ + && UINT_LEAST16_MAX <= INT_MAX) +typedef uint_least16_t yytype_uint16; +#elif !defined __UINT_LEAST16_MAX__ && USHRT_MAX <= INT_MAX +typedef unsigned short yytype_uint16; #else -typedef unsigned short int yytype_uint16; +typedef int yytype_uint16; #endif -#ifdef YYTYPE_INT16 -typedef YYTYPE_INT16 yytype_int16; -#else -typedef short int yytype_int16; +#ifndef YYPTRDIFF_T +# if defined __PTRDIFF_TYPE__ && defined __PTRDIFF_MAX__ +# define YYPTRDIFF_T __PTRDIFF_TYPE__ +# define YYPTRDIFF_MAXIMUM __PTRDIFF_MAX__ +# elif defined PTRDIFF_MAX +# ifndef ptrdiff_t +# include <stddef.h> /* INFRINGES ON USER NAME SPACE */ +# endif +# define YYPTRDIFF_T ptrdiff_t +# define YYPTRDIFF_MAXIMUM PTRDIFF_MAX +# else +# define YYPTRDIFF_T long +# define YYPTRDIFF_MAXIMUM LONG_MAX +# endif #endif #ifndef YYSIZE_T @@ -317,16 +381,28 @@ typedef short int yytype_int16; # define YYSIZE_T __SIZE_TYPE__ # elif defined size_t # define YYSIZE_T size_t -# elif ! defined YYSIZE_T && (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) +# elif defined __STDC_VERSION__ && 199901 <= __STDC_VERSION__ # include <stddef.h> /* INFRINGES ON USER NAME SPACE */ # define YYSIZE_T size_t # else -# define YYSIZE_T unsigned int +# define YYSIZE_T unsigned # endif #endif -#define YYSIZE_MAXIMUM ((YYSIZE_T) -1) +#define YYSIZE_MAXIMUM \ + YY_CAST (YYPTRDIFF_T, \ + (YYPTRDIFF_MAXIMUM < YY_CAST (YYSIZE_T, -1) \ + ? YYPTRDIFF_MAXIMUM \ + : YY_CAST (YYSIZE_T, -1))) + +#define YYSIZEOF(X) YY_CAST (YYPTRDIFF_T, sizeof (X)) + + +/* Stored state numbers (used for stacks). */ +typedef yytype_uint8 yy_state_t; + +/* State numbers in computations. */ +typedef int yy_state_fast_t; #ifndef YY_ # if defined YYENABLE_NLS && YYENABLE_NLS @@ -340,6 +416,23 @@ typedef short int yytype_int16; # endif #endif + +#ifndef YY_ATTRIBUTE_PURE +# if defined __GNUC__ && 2 < __GNUC__ + (96 <= __GNUC_MINOR__) +# define YY_ATTRIBUTE_PURE __attribute__ ((__pure__)) +# else +# define YY_ATTRIBUTE_PURE +# endif +#endif + +#ifndef YY_ATTRIBUTE_UNUSED +# if defined __GNUC__ && 2 < __GNUC__ + (7 <= __GNUC_MINOR__) +# define YY_ATTRIBUTE_UNUSED __attribute__ ((__unused__)) +# else +# define YY_ATTRIBUTE_UNUSED +# endif +#endif + /* Suppress unused-variable warnings by "using" E. */ #if ! defined lint || defined __GNUC__ # define YYUSE(E) ((void) (E)) @@ -347,25 +440,41 @@ typedef short int yytype_int16; # define YYUSE(E) /* empty */ #endif -/* Identity function, used to suppress warnings about constant conditions. */ -#ifndef lint -# define YYID(N) (N) -#else -#if (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) -static int -YYID (int yyi) +#if defined __GNUC__ && ! defined __ICC && 407 <= __GNUC__ * 100 + __GNUC_MINOR__ +/* Suppress an incorrect diagnostic about yylval being uninitialized. */ +# define YY_IGNORE_MAYBE_UNINITIALIZED_BEGIN \ + _Pragma ("GCC diagnostic push") \ + _Pragma ("GCC diagnostic ignored \"-Wuninitialized\"") \ + _Pragma ("GCC diagnostic ignored \"-Wmaybe-uninitialized\"") +# define YY_IGNORE_MAYBE_UNINITIALIZED_END \ + _Pragma ("GCC diagnostic pop") #else -static int -YYID (yyi) - int yyi; +# define YY_INITIAL_VALUE(Value) Value #endif -{ - return yyi; -} +#ifndef YY_IGNORE_MAYBE_UNINITIALIZED_BEGIN +# define YY_IGNORE_MAYBE_UNINITIALIZED_BEGIN +# define YY_IGNORE_MAYBE_UNINITIALIZED_END +#endif +#ifndef YY_INITIAL_VALUE +# define YY_INITIAL_VALUE(Value) /* Nothing. */ +#endif + +#if defined __cplusplus && defined __GNUC__ && ! defined __ICC && 6 <= __GNUC__ +# define YY_IGNORE_USELESS_CAST_BEGIN \ + _Pragma ("GCC diagnostic push") \ + _Pragma ("GCC diagnostic ignored \"-Wuseless-cast\"") +# define YY_IGNORE_USELESS_CAST_END \ + _Pragma ("GCC diagnostic pop") #endif +#ifndef YY_IGNORE_USELESS_CAST_BEGIN +# define YY_IGNORE_USELESS_CAST_BEGIN +# define YY_IGNORE_USELESS_CAST_END +#endif + + +#define YY_ASSERT(E) ((void) (0 && (E))) -#if ! defined yyoverflow || YYERROR_VERBOSE +#if !defined yyoverflow /* The parser invokes alloca or malloc; define the necessary symbols. */ @@ -382,8 +491,7 @@ YYID (yyi) # define alloca _alloca # else # define YYSTACK_ALLOC alloca -# if ! defined _ALLOCA_H && ! defined EXIT_SUCCESS && (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) +# if ! defined _ALLOCA_H && ! defined EXIT_SUCCESS # include <stdlib.h> /* INFRINGES ON USER NAME SPACE */ /* Use EXIT_SUCCESS as a witness for stdlib.h. */ # ifndef EXIT_SUCCESS @@ -395,8 +503,8 @@ YYID (yyi) # endif # ifdef YYSTACK_ALLOC - /* Pacify GCC's `empty if-body' warning. */ -# define YYSTACK_FREE(Ptr) do { /* empty */; } while (YYID (0)) + /* Pacify GCC's 'empty if-body' warning. */ +# define YYSTACK_FREE(Ptr) do { /* empty */; } while (0) # ifndef YYSTACK_ALLOC_MAXIMUM /* The OS might guarantee only one guard page at the bottom of the stack, and a page size can be as small as 4096 bytes. So we cannot safely @@ -412,7 +520,7 @@ YYID (yyi) # endif # if (defined __cplusplus && ! defined EXIT_SUCCESS \ && ! ((defined YYMALLOC || defined malloc) \ - && (defined YYFREE || defined free))) + && (defined YYFREE || defined free))) # include <stdlib.h> /* INFRINGES ON USER NAME SPACE */ # ifndef EXIT_SUCCESS # define EXIT_SUCCESS 0 @@ -420,40 +528,37 @@ YYID (yyi) # endif # ifndef YYMALLOC # define YYMALLOC malloc -# if ! defined malloc && ! defined EXIT_SUCCESS && (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) +# if ! defined malloc && ! defined EXIT_SUCCESS void *malloc (YYSIZE_T); /* INFRINGES ON USER NAME SPACE */ # endif # endif # ifndef YYFREE # define YYFREE free -# if ! defined free && ! defined EXIT_SUCCESS && (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) +# if ! defined free && ! defined EXIT_SUCCESS void free (void *); /* INFRINGES ON USER NAME SPACE */ # endif # endif # endif -#endif /* ! defined yyoverflow || YYERROR_VERBOSE */ - +#endif /* !defined yyoverflow */ #if (! defined yyoverflow \ && (! defined __cplusplus \ - || (defined YYSTYPE_IS_TRIVIAL && YYSTYPE_IS_TRIVIAL))) + || (defined YYSTYPE_IS_TRIVIAL && YYSTYPE_IS_TRIVIAL))) /* A type that is properly aligned for any stack member. */ union yyalloc { - yytype_int16 yyss_alloc; + yy_state_t yyss_alloc; YYSTYPE yyvs_alloc; }; /* The size of the maximum gap between one aligned stack and the next. */ -# define YYSTACK_GAP_MAXIMUM (sizeof (union yyalloc) - 1) +# define YYSTACK_GAP_MAXIMUM (YYSIZEOF (union yyalloc) - 1) /* The size of an array large to enough to hold all stacks, each with N elements. */ # define YYSTACK_BYTES(N) \ - ((N) * (sizeof (yytype_int16) + sizeof (YYSTYPE)) \ + ((N) * (YYSIZEOF (yy_state_t) + YYSIZEOF (YYSTYPE)) \ + YYSTACK_GAP_MAXIMUM) # define YYCOPY_NEEDED 1 @@ -463,16 +568,16 @@ union yyalloc elements in the stack, and YYPTR gives the new location of the stack. Advance YYPTR to a properly aligned location for the next stack. */ -# define YYSTACK_RELOCATE(Stack_alloc, Stack) \ - do \ - { \ - YYSIZE_T yynewbytes; \ - YYCOPY (&yyptr->Stack_alloc, Stack, yysize); \ - Stack = &yyptr->Stack_alloc; \ - yynewbytes = yystacksize * sizeof (*Stack) + YYSTACK_GAP_MAXIMUM; \ - yyptr += yynewbytes / sizeof (*yyptr); \ - } \ - while (YYID (0)) +# define YYSTACK_RELOCATE(Stack_alloc, Stack) \ + do \ + { \ + YYPTRDIFF_T yynewbytes; \ + YYCOPY (&yyptr->Stack_alloc, Stack, yysize); \ + Stack = &yyptr->Stack_alloc; \ + yynewbytes = yystacksize * YYSIZEOF (*Stack) + YYSTACK_GAP_MAXIMUM; \ + yyptr += yynewbytes / YYSIZEOF (*yyptr); \ + } \ + while (0) #endif @@ -482,16 +587,16 @@ union yyalloc # ifndef YYCOPY # if defined __GNUC__ && 1 < __GNUC__ # define YYCOPY(Dst, Src, Count) \ - __builtin_memcpy (Dst, Src, (Count) * sizeof (*(Src))) + __builtin_memcpy (Dst, Src, YY_CAST (YYSIZE_T, (Count)) * sizeof (*(Src))) # else # define YYCOPY(Dst, Src, Count) \ do \ { \ - YYSIZE_T yyi; \ + YYPTRDIFF_T yyi; \ for (yyi = 0; yyi < (Count); yyi++) \ (Dst)[yyi] = (Src)[yyi]; \ } \ - while (YYID (0)) + while (0) # endif # endif #endif /* !YYCOPY_NEEDED */ @@ -507,18 +612,23 @@ union yyalloc #define YYNNTS 46 /* YYNRULES -- Number of rules. */ #define YYNRULES 95 -/* YYNRULES -- Number of states. */ +/* YYNSTATES -- Number of states. */ #define YYNSTATES 143 -/* YYTRANSLATE(YYLEX) -- Bison symbol number corresponding to YYLEX. */ -#define YYUNDEFTOK 2 +/* YYMAXUTOK -- Last valid token kind. */ #define YYMAXUTOK 313 -#define YYTRANSLATE(YYX) \ - ((unsigned int) (YYX) <= YYMAXUTOK ? yytranslate[YYX] : YYUNDEFTOK) -/* YYTRANSLATE[YYLEX] -- Bison symbol number corresponding to YYLEX. */ -static const yytype_uint8 yytranslate[] = +/* YYTRANSLATE(TOKEN-NUM) -- Symbol number corresponding to TOKEN-NUM + as returned by yylex, with out-of-bounds checking. */ +#define YYTRANSLATE(YYX) \ + (0 <= (YYX) && (YYX) <= YYMAXUTOK \ + ? YY_CAST (yysymbol_kind_t, yytranslate[YYX]) \ + : YYSYMBOL_YYUNDEF) + +/* YYTRANSLATE[TOKEN-NUM] -- Symbol number corresponding to TOKEN-NUM + as returned by yylex. */ +static const yytype_int8 yytranslate[] = { 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, @@ -555,73 +665,35 @@ static const yytype_uint8 yytranslate[] = }; #if YYDEBUG -/* YYPRHS[YYN] -- Index of the first RHS symbol of rule number YYN in - YYRHS. */ -static const yytype_uint8 yyprhs[] = + /* YYRLINE[YYN] -- Source line where rule number YYN was defined. */ +static const yytype_int16 yyrline[] = { - 0, 0, 3, 4, 6, 8, 10, 12, 14, 16, - 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, - 38, 40, 42, 44, 46, 48, 50, 52, 54, 56, - 58, 60, 62, 64, 66, 68, 70, 72, 74, 76, - 78, 80, 82, 84, 86, 88, 90, 92, 93, 99, - 100, 103, 104, 112, 114, 115, 118, 120, 121, 128, - 129, 132, 133, 134, 140, 142, 147, 148, 149, 150, - 151, 167, 169, 171, 172, 173, 174, 175, 176, 197, - 199, 201, 203, 205, 207, 209, 211, 213, 215, 216, - 224, 225, 228, 229, 236, 238 + 0, 105, 105, 106, 108, 109, 110, 111, 113, 114, + 115, 116, 117, 120, 121, 122, 123, 124, 125, 126, + 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, + 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, + 149, 150, 151, 152, 153, 154, 155, 159, 158, 167, + 168, 170, 170, 207, 215, 216, 219, 221, 221, 230, + 231, 233, 234, 233, 241, 244, 250, 251, 256, 257, + 248, 265, 267, 271, 272, 280, 289, 296, 269, 320, + 321, 323, 324, 325, 327, 328, 330, 331, 335, 334, + 339, 340, 342, 342, 396, 398 }; +#endif -/* YYRHS -- A `-1'-separated list of the rules' RHS. */ -static const yytype_int8 yyrhs[] = -{ - 67, 0, -1, -1, 68, -1, 69, -1, 72, -1, - 80, -1, 87, -1, 70, -1, 71, -1, 95, -1, - 105, -1, 88, -1, 3, -1, 4, -1, 5, -1, - 6, -1, 7, -1, 8, -1, 9, -1, 10, -1, - 11, -1, 12, -1, 13, -1, 14, -1, 15, -1, - 16, -1, 17, -1, 18, -1, 19, -1, 20, -1, - 21, -1, 22, -1, 23, -1, 24, -1, 25, -1, - 26, -1, 27, -1, 28, -1, 29, -1, 30, -1, - 31, -1, 32, -1, 33, -1, 34, -1, 35, -1, - 36, -1, -1, 53, 73, 59, 74, 60, -1, -1, - 74, 75, -1, -1, 68, 76, 63, 77, 63, 78, - 65, -1, 57, -1, -1, 64, 79, -1, 58, -1, - -1, 55, 81, 59, 82, 68, 60, -1, -1, 82, - 83, -1, -1, -1, 61, 84, 86, 85, 62, -1, - 58, -1, 56, 59, 68, 60, -1, -1, -1, -1, - -1, 50, 59, 51, 89, 93, 65, 90, 52, 91, - 63, 94, 63, 65, 92, 60, -1, 58, -1, 57, - -1, -1, -1, -1, -1, -1, 37, 59, 38, 96, - 101, 65, 97, 39, 102, 65, 98, 40, 103, 65, - 99, 41, 104, 65, 100, 60, -1, 42, -1, 58, - -1, 43, -1, 44, -1, 45, -1, 46, -1, 47, - -1, 48, -1, 49, -1, -1, 54, 59, 70, 65, - 106, 107, 60, -1, -1, 107, 108, -1, -1, 63, - 110, 63, 109, 111, 65, -1, 57, -1, 58, -1 -}; +/** Accessing symbol of state STATE. */ +#define YY_ACCESSING_SYMBOL(State) YY_CAST (yysymbol_kind_t, yystos[State]) -/* YYRLINE[YYN] -- source line where rule number YYN was defined. */ -static const yytype_uint16 yyrline[] = -{ - 0, 99, 99, 100, 102, 103, 104, 105, 107, 108, - 109, 110, 111, 114, 115, 116, 117, 118, 119, 120, - 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, - 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, - 143, 144, 145, 146, 147, 148, 149, 153, 152, 161, - 162, 164, 164, 198, 204, 205, 208, 210, 210, 219, - 220, 222, 223, 222, 230, 233, 239, 240, 245, 246, - 237, 252, 254, 258, 259, 267, 276, 283, 256, 307, - 308, 310, 311, 312, 314, 315, 317, 318, 322, 321, - 326, 327, 329, 329, 381, 383 -}; -#endif +#if YYDEBUG || 0 +/* The user-facing name of the symbol whose (internal) number is + YYSYMBOL. No bounds checking. */ +static const char *yysymbol_name (yysymbol_kind_t yysymbol) YY_ATTRIBUTE_UNUSED; -#if YYDEBUG || YYERROR_VERBOSE || 0 /* YYTNAME[SYMBOL-NUM] -- String name of the symbol SYMBOL-NUM. First, the terminals, then, starting at YYNTOKENS, nonterminals. */ static const char *const yytname[] = { - "$end", "error", "$undefined", "H5T_STD_I8BE_TOKEN", + "\"end of file\"", "error", "\"invalid token\"", "H5T_STD_I8BE_TOKEN", "H5T_STD_I8LE_TOKEN", "H5T_STD_I16BE_TOKEN", "H5T_STD_I16LE_TOKEN", "H5T_STD_I32BE_TOKEN", "H5T_STD_I32LE_TOKEN", "H5T_STD_I64BE_TOKEN", "H5T_STD_I64LE_TOKEN", "H5T_STD_U8BE_TOKEN", "H5T_STD_U8LE_TOKEN", @@ -649,14 +721,20 @@ static const char *const yytname[] = "$@5", "dimsize", "vlen_type", "opaque_type", "$@6", "@7", "$@8", "$@9", "opaque_size", "opaque_tag", "string_type", "$@10", "$@11", "$@12", "$@13", "@14", "strsize", "strpad", "cset", "ctype", "enum_type", "$@15", - "enum_list", "enum_def", "$@16", "enum_symbol", "enum_val", YY_NULL + "enum_list", "enum_def", "$@16", "enum_symbol", "enum_val", YY_NULLPTR }; + +static const char * +yysymbol_name (yysymbol_kind_t yysymbol) +{ + return yytname[yysymbol]; +} #endif -# ifdef YYPRINT -/* YYTOKNUM[YYLEX-NUM] -- Internal token number corresponding to - token YYLEX-NUM. */ -static const yytype_uint16 yytoknum[] = +#ifdef YYPRINT +/* YYTOKNUM[NUM] -- (External) token number corresponding to the + (internal) symbol number NUM (which must be that of a token). */ +static const yytype_int16 yytoknum[] = { 0, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, @@ -666,73 +744,20 @@ static const yytype_uint16 yytoknum[] = 305, 306, 307, 308, 309, 310, 311, 312, 313, 123, 125, 91, 93, 34, 58, 59 }; -# endif +#endif -/* YYR1[YYN] -- Symbol number of symbol that rule YYN derives. */ -static const yytype_uint8 yyr1[] = -{ - 0, 66, 67, 67, 68, 68, 68, 68, 69, 69, - 69, 69, 69, 70, 70, 70, 70, 70, 70, 70, - 70, 70, 70, 70, 70, 70, 70, 70, 70, 70, - 70, 70, 70, 70, 70, 70, 70, 70, 70, 70, - 71, 71, 71, 71, 71, 71, 71, 73, 72, 74, - 74, 76, 75, 77, 78, 78, 79, 81, 80, 82, - 82, 84, 85, 83, 86, 87, 89, 90, 91, 92, - 88, 93, 94, 96, 97, 98, 99, 100, 95, 101, - 101, 102, 102, 102, 103, 103, 104, 104, 106, 105, - 107, 107, 109, 108, 110, 111 -}; +#define YYPACT_NINF (-25) -/* YYR2[YYN] -- Number of symbols composing right hand side of rule YYN. */ -static const yytype_uint8 yyr2[] = -{ - 0, 2, 0, 1, 1, 1, 1, 1, 1, 1, - 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, - 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, - 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, - 1, 1, 1, 1, 1, 1, 1, 0, 5, 0, - 2, 0, 7, 1, 0, 2, 1, 0, 6, 0, - 2, 0, 0, 5, 1, 4, 0, 0, 0, 0, - 15, 1, 1, 0, 0, 0, 0, 0, 20, 1, - 1, 1, 1, 1, 1, 1, 1, 1, 0, 7, - 0, 2, 0, 6, 1, 1 -}; +#define yypact_value_is_default(Yyn) \ + ((Yyn) == YYPACT_NINF) -/* YYDEFACT[STATE-NAME] -- Default reduction number in state STATE-NUM. - Performed when YYTABLE doesn't specify something else to do. Zero - means the default is an error. */ -static const yytype_uint8 yydefact[] = -{ - 2, 13, 14, 15, 16, 17, 18, 19, 20, 21, - 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, - 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, - 42, 43, 44, 45, 46, 0, 0, 47, 0, 57, - 0, 0, 3, 4, 8, 9, 5, 6, 7, 12, - 10, 11, 0, 0, 0, 0, 0, 0, 1, 73, - 66, 49, 0, 59, 0, 0, 0, 0, 88, 0, - 65, 79, 80, 0, 71, 0, 48, 51, 50, 90, - 61, 0, 60, 74, 67, 0, 0, 0, 58, 0, - 0, 0, 89, 0, 91, 64, 62, 0, 68, 53, - 0, 94, 0, 0, 81, 82, 83, 0, 0, 54, - 92, 63, 75, 0, 0, 0, 0, 0, 72, 0, - 56, 55, 52, 95, 0, 0, 0, 93, 84, 85, - 0, 69, 76, 0, 0, 70, 0, 86, 87, 0, - 77, 0, 78 -}; +#define YYTABLE_NINF (-1) -/* YYDEFGOTO[NTERM-NUM]. */ -static const yytype_int16 yydefgoto[] = -{ - -1, 41, 42, 43, 44, 45, 46, 54, 67, 78, - 85, 100, 115, 121, 47, 56, 69, 82, 87, 103, - 96, 48, 49, 66, 90, 108, 133, 75, 119, 50, - 65, 89, 117, 134, 141, 73, 107, 130, 139, 51, - 79, 86, 94, 116, 102, 124 -}; +#define yytable_value_is_error(Yyn) \ + 0 -/* YYPACT[STATE-NUM] -- Index in YYTABLE of the portion describing - STATE-NUM. */ -#define YYPACT_NINF -25 + /* YYPACT[STATE-NUM] -- Index in YYTABLE of the portion describing + STATE-NUM. */ static const yytype_int16 yypact[] = { 114, -25, -25, -25, -25, -25, -25, -25, -25, -25, @@ -752,7 +777,29 @@ static const yytype_int16 yypact[] = -25, 143, -25 }; -/* YYPGOTO[NTERM-NUM]. */ + /* YYDEFACT[STATE-NUM] -- Default reduction number in state STATE-NUM. + Performed when YYTABLE does not specify something else to do. Zero + means the default is an error. */ +static const yytype_int8 yydefact[] = +{ + 2, 13, 14, 15, 16, 17, 18, 19, 20, 21, + 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, + 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, + 42, 43, 44, 45, 46, 0, 0, 47, 0, 57, + 0, 0, 3, 4, 8, 9, 5, 6, 7, 12, + 10, 11, 0, 0, 0, 0, 0, 0, 1, 73, + 66, 49, 0, 59, 0, 0, 0, 0, 88, 0, + 65, 79, 80, 0, 71, 0, 48, 51, 50, 90, + 61, 0, 60, 74, 67, 0, 0, 0, 58, 0, + 0, 0, 89, 0, 91, 64, 62, 0, 68, 53, + 0, 94, 0, 0, 81, 82, 83, 0, 0, 54, + 92, 63, 75, 0, 0, 0, 0, 0, 72, 0, + 56, 55, 52, 95, 0, 0, 0, 93, 84, 85, + 0, 69, 76, 0, 0, 70, 0, 86, 87, 0, + 77, 0, 78 +}; + + /* YYPGOTO[NTERM-NUM]. */ static const yytype_int8 yypgoto[] = { -25, -25, -21, -25, 108, -25, -25, -25, -25, -25, @@ -762,10 +809,19 @@ static const yytype_int8 yypgoto[] = -25, -25, -25, -25, -25, -25 }; -/* YYTABLE[YYPACT[STATE-NUM]]. What to do in state STATE-NUM. If - positive, shift that token. If negative, reduce the rule which - number is the opposite. If YYTABLE_NINF, syntax error. */ -#define YYTABLE_NINF -1 + /* YYDEFGOTO[NTERM-NUM]. */ +static const yytype_int16 yydefgoto[] = +{ + -1, 41, 42, 43, 44, 45, 46, 54, 67, 78, + 85, 100, 115, 121, 47, 56, 69, 82, 87, 103, + 96, 48, 49, 66, 90, 108, 133, 75, 119, 50, + 65, 89, 117, 134, 141, 73, 107, 130, 139, 51, + 79, 86, 94, 116, 102, 124 +}; + + /* YYTABLE[YYPACT[STATE-NUM]] -- What to do in state STATE-NUM. If + positive, shift that token. If negative, reduce the rule whose + number is the opposite. If YYTABLE_NINF, syntax error. */ static const yytype_uint8 yytable[] = { 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, @@ -791,13 +847,7 @@ static const yytype_uint8 yytable[] = 132, 136, 140, 142 }; -#define yypact_value_is_default(Yystate) \ - (!!((Yystate) == (-25))) - -#define yytable_value_is_error(Yytable_value) \ - YYID (0) - -static const yytype_uint8 yycheck[] = +static const yytype_int8 yycheck[] = { 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, @@ -822,9 +872,9 @@ static const yytype_uint8 yycheck[] = 65, 41, 65, 60 }; -/* YYSTOS[STATE-NUM] -- The (internal number of the) accessing - symbol of state STATE-NUM. */ -static const yytype_uint8 yystos[] = + /* YYSTOS[STATE-NUM] -- The (internal number of the) accessing + symbol of state STATE-NUM. */ +static const yytype_int8 yystos[] = { 0, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, @@ -843,67 +893,70 @@ static const yytype_uint8 yystos[] = 65, 100, 60 }; -#define yyerrok (yyerrstatus = 0) -#define yyclearin (yychar = YYEMPTY) -#define YYEMPTY (-2) -#define YYEOF 0 - -#define YYACCEPT goto yyacceptlab -#define YYABORT goto yyabortlab -#define YYERROR goto yyerrorlab - - -/* Like YYERROR except do call yyerror. This remains here temporarily - to ease the transition to the new meaning of YYERROR, for GCC. - Once GCC version 2 has supplanted version 1, this can go. However, - YYFAIL appears to be in use. Nevertheless, it is formally deprecated - in Bison 2.4.2's NEWS entry, where a plan to phase it out is - discussed. */ - -#define YYFAIL goto yyerrlab -#if defined YYFAIL - /* This is here to suppress warnings from the GCC cpp's - -Wunused-macros. Normally we don't worry about that warning, but - some users do, and we want to make it easy for users to remove - YYFAIL uses, which will produce warnings from Bison 2.5. */ -#endif + /* YYR1[YYN] -- Symbol number of symbol that rule YYN derives. */ +static const yytype_int8 yyr1[] = +{ + 0, 66, 67, 67, 68, 68, 68, 68, 69, 69, + 69, 69, 69, 70, 70, 70, 70, 70, 70, 70, + 70, 70, 70, 70, 70, 70, 70, 70, 70, 70, + 70, 70, 70, 70, 70, 70, 70, 70, 70, 70, + 71, 71, 71, 71, 71, 71, 71, 73, 72, 74, + 74, 76, 75, 77, 78, 78, 79, 81, 80, 82, + 82, 84, 85, 83, 86, 87, 89, 90, 91, 92, + 88, 93, 94, 96, 97, 98, 99, 100, 95, 101, + 101, 102, 102, 102, 103, 103, 104, 104, 106, 105, + 107, 107, 109, 108, 110, 111 +}; -#define YYRECOVERING() (!!yyerrstatus) + /* YYR2[YYN] -- Number of symbols on the right hand side of rule YYN. */ +static const yytype_int8 yyr2[] = +{ + 0, 2, 0, 1, 1, 1, 1, 1, 1, 1, + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, + 1, 1, 1, 1, 1, 1, 1, 0, 5, 0, + 2, 0, 7, 1, 0, 2, 1, 0, 6, 0, + 2, 0, 0, 5, 1, 4, 0, 0, 0, 0, + 15, 1, 1, 0, 0, 0, 0, 0, 20, 1, + 1, 1, 1, 1, 1, 1, 1, 1, 0, 7, + 0, 2, 0, 6, 1, 1 +}; -#define YYBACKUP(Token, Value) \ -do \ - if (yychar == YYEMPTY) \ - { \ - yychar = (Token); \ - yylval = (Value); \ - YYPOPSTACK (yylen); \ - yystate = *yyssp; \ - goto yybackup; \ - } \ - else \ - { \ - yyerror (YY_("syntax error: cannot back up")); \ - YYERROR; \ - } \ -while (YYID (0)) - -/* Error token number */ -#define YYTERROR 1 -#define YYERRCODE 256 +enum { YYENOMEM = -2 }; -/* This macro is provided for backward compatibility. */ -#ifndef YY_LOCATION_PRINT -# define YY_LOCATION_PRINT(File, Loc) ((void) 0) -#endif +#define yyerrok (yyerrstatus = 0) +#define yyclearin (yychar = YYEMPTY) +#define YYACCEPT goto yyacceptlab +#define YYABORT goto yyabortlab +#define YYERROR goto yyerrorlab + + +#define YYRECOVERING() (!!yyerrstatus) + +#define YYBACKUP(Token, Value) \ + do \ + if (yychar == YYEMPTY) \ + { \ + yychar = (Token); \ + yylval = (Value); \ + YYPOPSTACK (yylen); \ + yystate = *yyssp; \ + goto yybackup; \ + } \ + else \ + { \ + yyerror (YY_("syntax error: cannot back up")); \ + YYERROR; \ + } \ + while (0) + +/* Backward compatibility with an undocumented macro. + Use YYerror or YYUNDEF. */ +#define YYERRCODE YYUNDEF -/* YYLEX -- calling `yylex' with the right arguments. */ -#ifdef YYLEX_PARAM -# define YYLEX yylex (YYLEX_PARAM) -#else -# define YYLEX yylex () -#endif /* Enable debugging if requested. */ #if YYDEBUG @@ -913,82 +966,65 @@ while (YYID (0)) # define YYFPRINTF fprintf # endif -# define YYDPRINTF(Args) \ -do { \ - if (yydebug) \ - YYFPRINTF Args; \ -} while (YYID (0)) - -# define YY_SYMBOL_PRINT(Title, Type, Value, Location) \ -do { \ - if (yydebug) \ - { \ - YYFPRINTF (stderr, "%s ", Title); \ - yy_symbol_print (stderr, \ - Type, Value); \ - YYFPRINTF (stderr, "\n"); \ - } \ -} while (YYID (0)) - - -/*--------------------------------. -| Print this symbol on YYOUTPUT. | -`--------------------------------*/ - -/*ARGSUSED*/ -#if (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) -static void -yy_symbol_value_print (FILE *yyoutput, int yytype, YYSTYPE const * const yyvaluep) -#else +# define YYDPRINTF(Args) \ +do { \ + if (yydebug) \ + YYFPRINTF Args; \ +} while (0) + +/* This macro is provided for backward compatibility. */ +# ifndef YY_LOCATION_PRINT +# define YY_LOCATION_PRINT(File, Loc) ((void) 0) +# endif + + +# define YY_SYMBOL_PRINT(Title, Kind, Value, Location) \ +do { \ + if (yydebug) \ + { \ + YYFPRINTF (stderr, "%s ", Title); \ + yy_symbol_print (stderr, \ + Kind, Value); \ + YYFPRINTF (stderr, "\n"); \ + } \ +} while (0) + + +/*-----------------------------------. +| Print this symbol's value on YYO. | +`-----------------------------------*/ + static void -yy_symbol_value_print (yyoutput, yytype, yyvaluep) - FILE *yyoutput; - int yytype; - YYSTYPE const * const yyvaluep; -#endif +yy_symbol_value_print (FILE *yyo, + yysymbol_kind_t yykind, YYSTYPE const * const yyvaluep) { - FILE *yyo = yyoutput; - YYUSE (yyo); + FILE *yyoutput = yyo; + YYUSE (yyoutput); if (!yyvaluep) return; # ifdef YYPRINT - if (yytype < YYNTOKENS) - YYPRINT (yyoutput, yytoknum[yytype], *yyvaluep); -# else - YYUSE (yyoutput); + if (yykind < YYNTOKENS) + YYPRINT (yyo, yytoknum[yykind], *yyvaluep); # endif - switch (yytype) - { - default: - break; - } + YY_IGNORE_MAYBE_UNINITIALIZED_BEGIN + YYUSE (yykind); + YY_IGNORE_MAYBE_UNINITIALIZED_END } -/*--------------------------------. -| Print this symbol on YYOUTPUT. | -`--------------------------------*/ +/*---------------------------. +| Print this symbol on YYO. | +`---------------------------*/ -#if (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) -static void -yy_symbol_print (FILE *yyoutput, int yytype, YYSTYPE const * const yyvaluep) -#else static void -yy_symbol_print (yyoutput, yytype, yyvaluep) - FILE *yyoutput; - int yytype; - YYSTYPE const * const yyvaluep; -#endif +yy_symbol_print (FILE *yyo, + yysymbol_kind_t yykind, YYSTYPE const * const yyvaluep) { - if (yytype < YYNTOKENS) - YYFPRINTF (yyoutput, "token %s (", yytname[yytype]); - else - YYFPRINTF (yyoutput, "nterm %s (", yytname[yytype]); + YYFPRINTF (yyo, "%s %s (", + yykind < YYNTOKENS ? "token" : "nterm", yysymbol_name (yykind)); - yy_symbol_value_print (yyoutput, yytype, yyvaluep); - YYFPRINTF (yyoutput, ")"); + yy_symbol_value_print (yyo, yykind, yyvaluep); + YYFPRINTF (yyo, ")"); } /*------------------------------------------------------------------. @@ -996,16 +1032,8 @@ yy_symbol_print (yyoutput, yytype, yyvaluep) | TOP (included). | `------------------------------------------------------------------*/ -#if (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) static void -yy_stack_print (yytype_int16 *yybottom, yytype_int16 *yytop) -#else -static void -yy_stack_print (yybottom, yytop) - yytype_int16 *yybottom; - yytype_int16 *yytop; -#endif +yy_stack_print (yy_state_t *yybottom, yy_state_t *yytop) { YYFPRINTF (stderr, "Stack now"); for (; yybottom <= yytop; yybottom++) @@ -1016,63 +1044,56 @@ yy_stack_print (yybottom, yytop) YYFPRINTF (stderr, "\n"); } -# define YY_STACK_PRINT(Bottom, Top) \ -do { \ - if (yydebug) \ - yy_stack_print ((Bottom), (Top)); \ -} while (YYID (0)) +# define YY_STACK_PRINT(Bottom, Top) \ +do { \ + if (yydebug) \ + yy_stack_print ((Bottom), (Top)); \ +} while (0) /*------------------------------------------------. | Report that the YYRULE is going to be reduced. | `------------------------------------------------*/ -#if (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) -static void -yy_reduce_print (YYSTYPE *yyvsp, int yyrule) -#else static void -yy_reduce_print (yyvsp, yyrule) - YYSTYPE *yyvsp; - int yyrule; -#endif +yy_reduce_print (yy_state_t *yyssp, YYSTYPE *yyvsp, + int yyrule) { + int yylno = yyrline[yyrule]; int yynrhs = yyr2[yyrule]; int yyi; - unsigned long int yylno = yyrline[yyrule]; - YYFPRINTF (stderr, "Reducing stack by rule %d (line %lu):\n", - yyrule - 1, yylno); + YYFPRINTF (stderr, "Reducing stack by rule %d (line %d):\n", + yyrule - 1, yylno); /* The symbols being reduced. */ for (yyi = 0; yyi < yynrhs; yyi++) { YYFPRINTF (stderr, " $%d = ", yyi + 1); - yy_symbol_print (stderr, yyrhs[yyprhs[yyrule] + yyi], - &(yyvsp[(yyi + 1) - (yynrhs)]) - ); + yy_symbol_print (stderr, + YY_ACCESSING_SYMBOL (+yyssp[yyi + 1 - yynrhs]), + &yyvsp[(yyi + 1) - (yynrhs)]); YYFPRINTF (stderr, "\n"); } } -# define YY_REDUCE_PRINT(Rule) \ -do { \ - if (yydebug) \ - yy_reduce_print (yyvsp, Rule); \ -} while (YYID (0)) +# define YY_REDUCE_PRINT(Rule) \ +do { \ + if (yydebug) \ + yy_reduce_print (yyssp, yyvsp, Rule); \ +} while (0) /* Nonzero means print parse trace. It is left uninitialized so that multiple parsers can coexist. */ int yydebug; #else /* !YYDEBUG */ -# define YYDPRINTF(Args) -# define YY_SYMBOL_PRINT(Title, Type, Value, Location) +# define YYDPRINTF(Args) ((void) 0) +# define YY_SYMBOL_PRINT(Title, Kind, Value, Location) # define YY_STACK_PRINT(Bottom, Top) # define YY_REDUCE_PRINT(Rule) #endif /* !YYDEBUG */ /* YYINITDEPTH -- initial size of the parser's stacks. */ -#ifndef YYINITDEPTH +#ifndef YYINITDEPTH # define YYINITDEPTH 200 #endif @@ -1088,363 +1109,77 @@ int yydebug; #endif -#if YYERROR_VERBOSE - -# ifndef yystrlen -# if defined __GLIBC__ && defined _STRING_H -# define yystrlen strlen -# else -/* Return the length of YYSTR. */ -#if (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) -static YYSIZE_T -yystrlen (const char *yystr) -#else -static YYSIZE_T -yystrlen (yystr) - const char *yystr; -#endif -{ - YYSIZE_T yylen; - for (yylen = 0; yystr[yylen]; yylen++) - continue; - return yylen; -} -# endif -# endif - -# ifndef yystpcpy -# if defined __GLIBC__ && defined _STRING_H && defined _GNU_SOURCE -# define yystpcpy stpcpy -# else -/* Copy YYSRC to YYDEST, returning the address of the terminating '\0' in - YYDEST. */ -#if (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) -static char * -yystpcpy (char *yydest, const char *yysrc) -#else -static char * -yystpcpy (yydest, yysrc) - char *yydest; - const char *yysrc; -#endif -{ - char *yyd = yydest; - const char *yys = yysrc; - - while ((*yyd++ = *yys++) != '\0') - continue; - - return yyd - 1; -} -# endif -# endif -# ifndef yytnamerr -/* Copy to YYRES the contents of YYSTR after stripping away unnecessary - quotes and backslashes, so that it's suitable for yyerror. The - heuristic is that double-quoting is unnecessary unless the string - contains an apostrophe, a comma, or backslash (other than - backslash-backslash). YYSTR is taken from yytname. If YYRES is - null, do not copy; instead, return the length of what the result - would have been. */ -static YYSIZE_T -yytnamerr (char *yyres, const char *yystr) -{ - if (*yystr == '"') - { - YYSIZE_T yyn = 0; - char const *yyp = yystr; - - for (;;) - switch (*++yyp) - { - case '\'': - case ',': - goto do_not_strip_quotes; - - case '\\': - if (*++yyp != '\\') - goto do_not_strip_quotes; - /* Fall through. */ - default: - if (yyres) - yyres[yyn] = *yyp; - yyn++; - break; - - case '"': - if (yyres) - yyres[yyn] = '\0'; - return yyn; - } - do_not_strip_quotes: ; - } - if (! yyres) - return yystrlen (yystr); - return yystpcpy (yyres, yystr) - yyres; -} -# endif - -/* Copy into *YYMSG, which is of size *YYMSG_ALLOC, an error message - about the unexpected token YYTOKEN for the state stack whose top is - YYSSP. - - Return 0 if *YYMSG was successfully written. Return 1 if *YYMSG is - not large enough to hold the message. In that case, also set - *YYMSG_ALLOC to the required number of bytes. Return 2 if the - required number of bytes is too large to store. */ -static int -yysyntax_error (YYSIZE_T *yymsg_alloc, char **yymsg, - yytype_int16 *yyssp, int yytoken) -{ - YYSIZE_T yysize0 = yytnamerr (YY_NULL, yytname[yytoken]); - YYSIZE_T yysize = yysize0; - enum { YYERROR_VERBOSE_ARGS_MAXIMUM = 5 }; - /* Internationalized format string. */ - const char *yyformat = YY_NULL; - /* Arguments of yyformat. */ - char const *yyarg[YYERROR_VERBOSE_ARGS_MAXIMUM]; - /* Number of reported tokens (one for the "unexpected", one per - "expected"). */ - int yycount = 0; - - /* There are many possibilities here to consider: - - Assume YYFAIL is not used. It's too flawed to consider. See - <http://lists.gnu.org/archive/html/bison-patches/2009-12/msg00024.html> - for details. YYERROR is fine as it does not invoke this - function. - - If this state is a consistent state with a default action, then - the only way this function was invoked is if the default action - is an error action. In that case, don't check for expected - tokens because there are none. - - The only way there can be no lookahead present (in yychar) is if - this state is a consistent state with a default action. Thus, - detecting the absence of a lookahead is sufficient to determine - that there is no unexpected or expected token to report. In that - case, just report a simple "syntax error". - - Don't assume there isn't a lookahead just because this state is a - consistent state with a default action. There might have been a - previous inconsistent state, consistent state with a non-default - action, or user semantic action that manipulated yychar. - - Of course, the expected token list depends on states to have - correct lookahead information, and it depends on the parser not - to perform extra reductions after fetching a lookahead from the - scanner and before detecting a syntax error. Thus, state merging - (from LALR or IELR) and default reductions corrupt the expected - token list. However, the list is correct for canonical LR with - one exception: it will still contain any token that will not be - accepted due to an error action in a later state. - */ - if (yytoken != YYEMPTY) - { - int yyn = yypact[*yyssp]; - yyarg[yycount++] = yytname[yytoken]; - if (!yypact_value_is_default (yyn)) - { - /* Start YYX at -YYN if negative to avoid negative indexes in - YYCHECK. In other words, skip the first -YYN actions for - this state because they are default actions. */ - int yyxbegin = yyn < 0 ? -yyn : 0; - /* Stay within bounds of both yycheck and yytname. */ - int yychecklim = YYLAST - yyn + 1; - int yyxend = yychecklim < YYNTOKENS ? yychecklim : YYNTOKENS; - int yyx; - - for (yyx = yyxbegin; yyx < yyxend; ++yyx) - if (yycheck[yyx + yyn] == yyx && yyx != YYTERROR - && !yytable_value_is_error (yytable[yyx + yyn])) - { - if (yycount == YYERROR_VERBOSE_ARGS_MAXIMUM) - { - yycount = 1; - yysize = yysize0; - break; - } - yyarg[yycount++] = yytname[yyx]; - { - YYSIZE_T yysize1 = yysize + yytnamerr (YY_NULL, yytname[yyx]); - if (! (yysize <= yysize1 - && yysize1 <= YYSTACK_ALLOC_MAXIMUM)) - return 2; - yysize = yysize1; - } - } - } - } - - switch (yycount) - { -# define YYCASE_(N, S) \ - case N: \ - yyformat = S; \ - break - YYCASE_(0, YY_("syntax error")); - YYCASE_(1, YY_("syntax error, unexpected %s")); - YYCASE_(2, YY_("syntax error, unexpected %s, expecting %s")); - YYCASE_(3, YY_("syntax error, unexpected %s, expecting %s or %s")); - YYCASE_(4, YY_("syntax error, unexpected %s, expecting %s or %s or %s")); - YYCASE_(5, YY_("syntax error, unexpected %s, expecting %s or %s or %s or %s")); -# undef YYCASE_ - } - - { - YYSIZE_T yysize1 = yysize + yystrlen (yyformat); - if (! (yysize <= yysize1 && yysize1 <= YYSTACK_ALLOC_MAXIMUM)) - return 2; - yysize = yysize1; - } - - if (*yymsg_alloc < yysize) - { - *yymsg_alloc = 2 * yysize; - if (! (yysize <= *yymsg_alloc - && *yymsg_alloc <= YYSTACK_ALLOC_MAXIMUM)) - *yymsg_alloc = YYSTACK_ALLOC_MAXIMUM; - return 1; - } - - /* Avoid sprintf, as that infringes on the user's name space. - Don't have undefined behavior even if the translation - produced a string with the wrong number of "%s"s. */ - { - char *yyp = *yymsg; - int yyi = 0; - while ((*yyp = *yyformat) != '\0') - if (*yyp == '%' && yyformat[1] == 's' && yyi < yycount) - { - yyp += yytnamerr (yyp, yyarg[yyi++]); - yyformat += 2; - } - else - { - yyp++; - yyformat++; - } - } - return 0; -} -#endif /* YYERROR_VERBOSE */ /*-----------------------------------------------. | Release the memory associated to this symbol. | `-----------------------------------------------*/ -/*ARGSUSED*/ -#if (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) -static void -yydestruct (const char *yymsg, int yytype, YYSTYPE *yyvaluep) -#else static void -yydestruct (yymsg, yytype, yyvaluep) - const char *yymsg; - int yytype; - YYSTYPE *yyvaluep; -#endif +yydestruct (const char *yymsg, + yysymbol_kind_t yykind, YYSTYPE *yyvaluep) { YYUSE (yyvaluep); - if (!yymsg) yymsg = "Deleting"; - YY_SYMBOL_PRINT (yymsg, yytype, yyvaluep, yylocationp); + YY_SYMBOL_PRINT (yymsg, yykind, yyvaluep, yylocationp); - switch (yytype) - { - - default: - break; - } + YY_IGNORE_MAYBE_UNINITIALIZED_BEGIN + YYUSE (yykind); + YY_IGNORE_MAYBE_UNINITIALIZED_END } - - -/* The lookahead symbol. */ +/* Lookahead token kind. */ int yychar; - -#ifndef YY_IGNORE_MAYBE_UNINITIALIZED_BEGIN -# define YY_IGNORE_MAYBE_UNINITIALIZED_BEGIN -# define YY_IGNORE_MAYBE_UNINITIALIZED_END -#endif -#ifndef YY_INITIAL_VALUE -# define YY_INITIAL_VALUE(Value) /* Nothing. */ -#endif - /* The semantic value of the lookahead symbol. */ -YYSTYPE yylval YY_INITIAL_VALUE(yyval_default); - +YYSTYPE yylval; /* Number of syntax errors so far. */ int yynerrs; + + /*----------. | yyparse. | `----------*/ -#ifdef YYPARSE_PARAM -#if (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) -hid_t -yyparse (void *YYPARSE_PARAM) -#else -hid_t -yyparse (YYPARSE_PARAM) - void *YYPARSE_PARAM; -#endif -#else /* ! YYPARSE_PARAM */ -#if (defined __STDC__ || defined __C99__FUNC__ \ - || defined __cplusplus || defined _MSC_VER) hid_t yyparse (void) -#else -hid_t -yyparse () - -#endif -#endif { - int yystate; + yy_state_fast_t yystate = 0; /* Number of tokens to shift before error messages enabled. */ - int yyerrstatus; - - /* The stacks and their tools: - `yyss': related to states. - `yyvs': related to semantic values. + int yyerrstatus = 0; - Refer to the stacks through separate pointers, to allow yyoverflow + /* Refer to the stacks through separate pointers, to allow yyoverflow to reallocate them elsewhere. */ - /* The state stack. */ - yytype_int16 yyssa[YYINITDEPTH]; - yytype_int16 *yyss; - yytype_int16 *yyssp; + /* Their size. */ + YYPTRDIFF_T yystacksize = YYINITDEPTH; - /* The semantic value stack. */ - YYSTYPE yyvsa[YYINITDEPTH]; - YYSTYPE *yyvs; - YYSTYPE *yyvsp; + /* The state stack: array, bottom, top. */ + yy_state_t yyssa[YYINITDEPTH]; + yy_state_t *yyss = yyssa; + yy_state_t *yyssp = yyss; - YYSIZE_T yystacksize; + /* The semantic value stack: array, bottom, top. */ + YYSTYPE yyvsa[YYINITDEPTH]; + YYSTYPE *yyvs = yyvsa; + YYSTYPE *yyvsp = yyvs; int yyn; + /* The return value of yyparse. */ int yyresult; - /* Lookahead token as an internal (translated) token number. */ - int yytoken = 0; + /* Lookahead symbol kind. */ + yysymbol_kind_t yytoken = YYSYMBOL_YYEMPTY; /* The variables used to return semantic value and location from the action routines. */ YYSTYPE yyval; -#if YYERROR_VERBOSE - /* Buffer for error messages, and its allocated size. */ - char yymsgbuf[128]; - char *yymsg = yymsgbuf; - YYSIZE_T yymsg_alloc = sizeof yymsgbuf; -#endif + #define YYPOPSTACK(N) (yyvsp -= (N), yyssp -= (N)) @@ -1452,102 +1187,105 @@ yyparse () Keep to zero when no symbol should be popped. */ int yylen = 0; - yyssp = yyss = yyssa; - yyvsp = yyvs = yyvsa; - yystacksize = YYINITDEPTH; - YYDPRINTF ((stderr, "Starting parse\n")); - yystate = 0; - yyerrstatus = 0; - yynerrs = 0; yychar = YYEMPTY; /* Cause a token to be read. */ goto yysetstate; + /*------------------------------------------------------------. -| yynewstate -- Push a new state, which is found in yystate. | +| yynewstate -- push a new state, which is found in yystate. | `------------------------------------------------------------*/ - yynewstate: +yynewstate: /* In all cases, when you get here, the value and location stacks have just been pushed. So pushing a state here evens the stacks. */ yyssp++; - yysetstate: - *yyssp = yystate; + +/*--------------------------------------------------------------------. +| yysetstate -- set current state (the top of the stack) to yystate. | +`--------------------------------------------------------------------*/ +yysetstate: + YYDPRINTF ((stderr, "Entering state %d\n", yystate)); + YY_ASSERT (0 <= yystate && yystate < YYNSTATES); + YY_IGNORE_USELESS_CAST_BEGIN + *yyssp = YY_CAST (yy_state_t, yystate); + YY_IGNORE_USELESS_CAST_END + YY_STACK_PRINT (yyss, yyssp); if (yyss + yystacksize - 1 <= yyssp) +#if !defined yyoverflow && !defined YYSTACK_RELOCATE + goto yyexhaustedlab; +#else { /* Get the current used size of the three stacks, in elements. */ - YYSIZE_T yysize = yyssp - yyss + 1; + YYPTRDIFF_T yysize = yyssp - yyss + 1; -#ifdef yyoverflow +# if defined yyoverflow { - /* Give user a chance to reallocate the stack. Use copies of - these so that the &'s don't force the real ones into - memory. */ - YYSTYPE *yyvs1 = yyvs; - yytype_int16 *yyss1 = yyss; - - /* Each stack pointer address is followed by the size of the - data in use in that stack, in bytes. This used to be a - conditional around just the two extra args, but that might - be undefined if yyoverflow is a macro. */ - yyoverflow (YY_("memory exhausted"), - &yyss1, yysize * sizeof (*yyssp), - &yyvs1, yysize * sizeof (*yyvsp), - &yystacksize); - - yyss = yyss1; - yyvs = yyvs1; + /* Give user a chance to reallocate the stack. Use copies of + these so that the &'s don't force the real ones into + memory. */ + yy_state_t *yyss1 = yyss; + YYSTYPE *yyvs1 = yyvs; + + /* Each stack pointer address is followed by the size of the + data in use in that stack, in bytes. This used to be a + conditional around just the two extra args, but that might + be undefined if yyoverflow is a macro. */ + yyoverflow (YY_("memory exhausted"), + &yyss1, yysize * YYSIZEOF (*yyssp), + &yyvs1, yysize * YYSIZEOF (*yyvsp), + &yystacksize); + yyss = yyss1; + yyvs = yyvs1; } -#else /* no yyoverflow */ -# ifndef YYSTACK_RELOCATE - goto yyexhaustedlab; -# else +# else /* defined YYSTACK_RELOCATE */ /* Extend the stack our own way. */ if (YYMAXDEPTH <= yystacksize) - goto yyexhaustedlab; + goto yyexhaustedlab; yystacksize *= 2; if (YYMAXDEPTH < yystacksize) - yystacksize = YYMAXDEPTH; + yystacksize = YYMAXDEPTH; { - yytype_int16 *yyss1 = yyss; - union yyalloc *yyptr = - (union yyalloc *) YYSTACK_ALLOC (YYSTACK_BYTES (yystacksize)); - if (! yyptr) - goto yyexhaustedlab; - YYSTACK_RELOCATE (yyss_alloc, yyss); - YYSTACK_RELOCATE (yyvs_alloc, yyvs); + yy_state_t *yyss1 = yyss; + union yyalloc *yyptr = + YY_CAST (union yyalloc *, + YYSTACK_ALLOC (YY_CAST (YYSIZE_T, YYSTACK_BYTES (yystacksize)))); + if (! yyptr) + goto yyexhaustedlab; + YYSTACK_RELOCATE (yyss_alloc, yyss); + YYSTACK_RELOCATE (yyvs_alloc, yyvs); # undef YYSTACK_RELOCATE - if (yyss1 != yyssa) - YYSTACK_FREE (yyss1); + if (yyss1 != yyssa) + YYSTACK_FREE (yyss1); } # endif -#endif /* no yyoverflow */ yyssp = yyss + yysize - 1; yyvsp = yyvs + yysize - 1; - YYDPRINTF ((stderr, "Stack size increased to %lu\n", - (unsigned long int) yystacksize)); + YY_IGNORE_USELESS_CAST_BEGIN + YYDPRINTF ((stderr, "Stack size increased to %ld\n", + YY_CAST (long, yystacksize))); + YY_IGNORE_USELESS_CAST_END if (yyss + yystacksize - 1 <= yyssp) - YYABORT; + YYABORT; } - - YYDPRINTF ((stderr, "Entering state %d\n", yystate)); +#endif /* !defined yyoverflow && !defined YYSTACK_RELOCATE */ if (yystate == YYFINAL) YYACCEPT; goto yybackup; + /*-----------. | yybackup. | `-----------*/ yybackup: - /* Do appropriate processing given the current state. Read a lookahead token if we need one and don't already have one. */ @@ -1558,18 +1296,29 @@ yybackup: /* Not known => get a lookahead token if don't already have one. */ - /* YYCHAR is either YYEMPTY or YYEOF or a valid lookahead symbol. */ + /* YYCHAR is either empty, or end-of-input, or a valid lookahead. */ if (yychar == YYEMPTY) { - YYDPRINTF ((stderr, "Reading a token: ")); - yychar = YYLEX; + YYDPRINTF ((stderr, "Reading a token\n")); + yychar = yylex (); } if (yychar <= YYEOF) { - yychar = yytoken = YYEOF; + yychar = YYEOF; + yytoken = YYSYMBOL_YYEOF; YYDPRINTF ((stderr, "Now at end of input.\n")); } + else if (yychar == YYerror) + { + /* The scanner already issued an error message, process directly + to error recovery. But do not keep the error token as + lookahead, it is too special and may lead us to an endless + loop in error recovery. */ + yychar = YYUNDEF; + yytoken = YYSYMBOL_YYerror; + goto yyerrlab1; + } else { yytoken = YYTRANSLATE (yychar); @@ -1597,15 +1346,13 @@ yybackup: /* Shift the lookahead token. */ YY_SYMBOL_PRINT ("Shifting", yytoken, &yylval, &yylloc); - - /* Discard the shifted token. */ - yychar = YYEMPTY; - yystate = yyn; YY_IGNORE_MAYBE_UNINITIALIZED_BEGIN *++yyvsp = yylval; YY_IGNORE_MAYBE_UNINITIALIZED_END + /* Discard the shifted token. */ + yychar = YYEMPTY; goto yynewstate; @@ -1620,14 +1367,14 @@ yydefault: /*-----------------------------. -| yyreduce -- Do a reduction. | +| yyreduce -- do a reduction. | `-----------------------------*/ yyreduce: /* yyn is the number of a rule to reduce with. */ yylen = yyr2[yyn]; /* If YYLEN is nonzero, implement the default value of the action: - `$$ = $1'. + '$$ = $1'. Otherwise, the following line sets YYVAL to garbage. This behavior is undocumented and Bison @@ -1640,434 +1387,440 @@ yyreduce: YY_REDUCE_PRINT (yyn); switch (yyn) { - case 2: -/* Line 1792 of yacc.c */ -#line 99 "H5LTparse.y" - { memset(arr_stack, 0, STACK_SIZE*sizeof(struct arr_info)); /*initialize here?*/ } + case 2: /* start: %empty */ +#line 105 "hl/src/H5LTparse.y" + { memset(arr_stack, 0, STACK_SIZE*sizeof(struct arr_info)); /*initialize here?*/ } +#line 1366 "hl/src/H5LTparse.c" break; - case 3: -/* Line 1792 of yacc.c */ -#line 100 "H5LTparse.y" - { return (yyval.hid);} + case 3: /* start: ddl_type */ +#line 106 "hl/src/H5LTparse.y" + { return (yyval.hid);} +#line 1372 "hl/src/H5LTparse.c" break; - case 13: -/* Line 1792 of yacc.c */ -#line 114 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_I8BE); } + case 13: /* integer_type: H5T_STD_I8BE_TOKEN */ +#line 120 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_I8BE); } +#line 1378 "hl/src/H5LTparse.c" break; - case 14: -/* Line 1792 of yacc.c */ -#line 115 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_I8LE); } + case 14: /* integer_type: H5T_STD_I8LE_TOKEN */ +#line 121 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_I8LE); } +#line 1384 "hl/src/H5LTparse.c" break; - case 15: -/* Line 1792 of yacc.c */ -#line 116 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_I16BE); } + case 15: /* integer_type: H5T_STD_I16BE_TOKEN */ +#line 122 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_I16BE); } +#line 1390 "hl/src/H5LTparse.c" break; - case 16: -/* Line 1792 of yacc.c */ -#line 117 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_I16LE); } + case 16: /* integer_type: H5T_STD_I16LE_TOKEN */ +#line 123 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_I16LE); } +#line 1396 "hl/src/H5LTparse.c" break; - case 17: -/* Line 1792 of yacc.c */ -#line 118 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_I32BE); } + case 17: /* integer_type: H5T_STD_I32BE_TOKEN */ +#line 124 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_I32BE); } +#line 1402 "hl/src/H5LTparse.c" break; - case 18: -/* Line 1792 of yacc.c */ -#line 119 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_I32LE); } + case 18: /* integer_type: H5T_STD_I32LE_TOKEN */ +#line 125 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_I32LE); } +#line 1408 "hl/src/H5LTparse.c" break; - case 19: -/* Line 1792 of yacc.c */ -#line 120 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_I64BE); } + case 19: /* integer_type: H5T_STD_I64BE_TOKEN */ +#line 126 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_I64BE); } +#line 1414 "hl/src/H5LTparse.c" break; - case 20: -/* Line 1792 of yacc.c */ -#line 121 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_I64LE); } + case 20: /* integer_type: H5T_STD_I64LE_TOKEN */ +#line 127 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_I64LE); } +#line 1420 "hl/src/H5LTparse.c" break; - case 21: -/* Line 1792 of yacc.c */ -#line 122 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_U8BE); } + case 21: /* integer_type: H5T_STD_U8BE_TOKEN */ +#line 128 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_U8BE); } +#line 1426 "hl/src/H5LTparse.c" break; - case 22: -/* Line 1792 of yacc.c */ -#line 123 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_U8LE); } + case 22: /* integer_type: H5T_STD_U8LE_TOKEN */ +#line 129 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_U8LE); } +#line 1432 "hl/src/H5LTparse.c" break; - case 23: -/* Line 1792 of yacc.c */ -#line 124 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_U16BE); } + case 23: /* integer_type: H5T_STD_U16BE_TOKEN */ +#line 130 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_U16BE); } +#line 1438 "hl/src/H5LTparse.c" break; - case 24: -/* Line 1792 of yacc.c */ -#line 125 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_U16LE); } + case 24: /* integer_type: H5T_STD_U16LE_TOKEN */ +#line 131 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_U16LE); } +#line 1444 "hl/src/H5LTparse.c" break; - case 25: -/* Line 1792 of yacc.c */ -#line 126 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_U32BE); } + case 25: /* integer_type: H5T_STD_U32BE_TOKEN */ +#line 132 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_U32BE); } +#line 1450 "hl/src/H5LTparse.c" break; - case 26: -/* Line 1792 of yacc.c */ -#line 127 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_U32LE); } + case 26: /* integer_type: H5T_STD_U32LE_TOKEN */ +#line 133 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_U32LE); } +#line 1456 "hl/src/H5LTparse.c" break; - case 27: -/* Line 1792 of yacc.c */ -#line 128 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_U64BE); } + case 27: /* integer_type: H5T_STD_U64BE_TOKEN */ +#line 134 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_U64BE); } +#line 1462 "hl/src/H5LTparse.c" break; - case 28: -/* Line 1792 of yacc.c */ -#line 129 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_STD_U64LE); } + case 28: /* integer_type: H5T_STD_U64LE_TOKEN */ +#line 135 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_STD_U64LE); } +#line 1468 "hl/src/H5LTparse.c" break; - case 29: -/* Line 1792 of yacc.c */ -#line 130 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_NATIVE_CHAR); } + case 29: /* integer_type: H5T_NATIVE_CHAR_TOKEN */ +#line 136 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_NATIVE_CHAR); } +#line 1474 "hl/src/H5LTparse.c" break; - case 30: -/* Line 1792 of yacc.c */ -#line 131 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_NATIVE_SCHAR); } + case 30: /* integer_type: H5T_NATIVE_SCHAR_TOKEN */ +#line 137 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_NATIVE_SCHAR); } +#line 1480 "hl/src/H5LTparse.c" break; - case 31: -/* Line 1792 of yacc.c */ -#line 132 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_NATIVE_UCHAR); } + case 31: /* integer_type: H5T_NATIVE_UCHAR_TOKEN */ +#line 138 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_NATIVE_UCHAR); } +#line 1486 "hl/src/H5LTparse.c" break; - case 32: -/* Line 1792 of yacc.c */ -#line 133 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_NATIVE_SHORT); } + case 32: /* integer_type: H5T_NATIVE_SHORT_TOKEN */ +#line 139 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_NATIVE_SHORT); } +#line 1492 "hl/src/H5LTparse.c" break; - case 33: -/* Line 1792 of yacc.c */ -#line 134 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_NATIVE_USHORT); } + case 33: /* integer_type: H5T_NATIVE_USHORT_TOKEN */ +#line 140 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_NATIVE_USHORT); } +#line 1498 "hl/src/H5LTparse.c" break; - case 34: -/* Line 1792 of yacc.c */ -#line 135 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_NATIVE_INT); } + case 34: /* integer_type: H5T_NATIVE_INT_TOKEN */ +#line 141 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_NATIVE_INT); } +#line 1504 "hl/src/H5LTparse.c" break; - case 35: -/* Line 1792 of yacc.c */ -#line 136 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_NATIVE_UINT); } + case 35: /* integer_type: H5T_NATIVE_UINT_TOKEN */ +#line 142 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_NATIVE_UINT); } +#line 1510 "hl/src/H5LTparse.c" break; - case 36: -/* Line 1792 of yacc.c */ -#line 137 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_NATIVE_LONG); } + case 36: /* integer_type: H5T_NATIVE_LONG_TOKEN */ +#line 143 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_NATIVE_LONG); } +#line 1516 "hl/src/H5LTparse.c" break; - case 37: -/* Line 1792 of yacc.c */ -#line 138 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_NATIVE_ULONG); } + case 37: /* integer_type: H5T_NATIVE_ULONG_TOKEN */ +#line 144 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_NATIVE_ULONG); } +#line 1522 "hl/src/H5LTparse.c" break; - case 38: -/* Line 1792 of yacc.c */ -#line 139 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_NATIVE_LLONG); } + case 38: /* integer_type: H5T_NATIVE_LLONG_TOKEN */ +#line 145 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_NATIVE_LLONG); } +#line 1528 "hl/src/H5LTparse.c" break; - case 39: -/* Line 1792 of yacc.c */ -#line 140 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_NATIVE_ULLONG); } + case 39: /* integer_type: H5T_NATIVE_ULLONG_TOKEN */ +#line 146 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_NATIVE_ULLONG); } +#line 1534 "hl/src/H5LTparse.c" break; - case 40: -/* Line 1792 of yacc.c */ -#line 143 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_IEEE_F32BE); } + case 40: /* fp_type: H5T_IEEE_F32BE_TOKEN */ +#line 149 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_IEEE_F32BE); } +#line 1540 "hl/src/H5LTparse.c" break; - case 41: -/* Line 1792 of yacc.c */ -#line 144 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_IEEE_F32LE); } + case 41: /* fp_type: H5T_IEEE_F32LE_TOKEN */ +#line 150 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_IEEE_F32LE); } +#line 1546 "hl/src/H5LTparse.c" break; - case 42: -/* Line 1792 of yacc.c */ -#line 145 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_IEEE_F64BE); } + case 42: /* fp_type: H5T_IEEE_F64BE_TOKEN */ +#line 151 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_IEEE_F64BE); } +#line 1552 "hl/src/H5LTparse.c" break; - case 43: -/* Line 1792 of yacc.c */ -#line 146 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_IEEE_F64LE); } + case 43: /* fp_type: H5T_IEEE_F64LE_TOKEN */ +#line 152 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_IEEE_F64LE); } +#line 1558 "hl/src/H5LTparse.c" break; - case 44: -/* Line 1792 of yacc.c */ -#line 147 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_NATIVE_FLOAT); } + case 44: /* fp_type: H5T_NATIVE_FLOAT_TOKEN */ +#line 153 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_NATIVE_FLOAT); } +#line 1564 "hl/src/H5LTparse.c" break; - case 45: -/* Line 1792 of yacc.c */ -#line 148 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_NATIVE_DOUBLE); } + case 45: /* fp_type: H5T_NATIVE_DOUBLE_TOKEN */ +#line 154 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_NATIVE_DOUBLE); } +#line 1570 "hl/src/H5LTparse.c" break; - case 46: -/* Line 1792 of yacc.c */ -#line 149 "H5LTparse.y" - { (yyval.hid) = H5Tcopy(H5T_NATIVE_LDOUBLE); } + case 46: /* fp_type: H5T_NATIVE_LDOUBLE_TOKEN */ +#line 155 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tcopy(H5T_NATIVE_LDOUBLE); } +#line 1576 "hl/src/H5LTparse.c" break; - case 47: -/* Line 1792 of yacc.c */ -#line 153 "H5LTparse.y" - { csindex++; cmpd_stack[csindex].id = H5Tcreate(H5T_COMPOUND, 1); /*temporarily set size to 1*/ } + case 47: /* $@1: %empty */ +#line 159 "hl/src/H5LTparse.y" + { csindex++; cmpd_stack[csindex].id = H5Tcreate(H5T_COMPOUND, 1); /*temporarily set size to 1*/ } +#line 1582 "hl/src/H5LTparse.c" break; - case 48: -/* Line 1792 of yacc.c */ -#line 155 "H5LTparse.y" - { (yyval.hid) = cmpd_stack[csindex].id; + case 48: /* compound_type: H5T_COMPOUND_TOKEN $@1 '{' memb_list '}' */ +#line 161 "hl/src/H5LTparse.y" + { (yyval.hid) = cmpd_stack[csindex].id; cmpd_stack[csindex].id = 0; cmpd_stack[csindex].first_memb = 1; csindex--; } +#line 1592 "hl/src/H5LTparse.c" break; - case 51: -/* Line 1792 of yacc.c */ -#line 164 "H5LTparse.y" - { cmpd_stack[csindex].is_field = 1; /*notify lexer a compound member is parsed*/ } + case 51: /* $@2: %empty */ +#line 170 "hl/src/H5LTparse.y" + { cmpd_stack[csindex].is_field = 1; /*notify lexer a compound member is parsed*/ } +#line 1598 "hl/src/H5LTparse.c" break; - case 52: -/* Line 1792 of yacc.c */ -#line 166 "H5LTparse.y" - { + case 52: /* memb_def: ddl_type $@2 '"' field_name '"' field_offset ';' */ +#line 172 "hl/src/H5LTparse.y" + { size_t origin_size, new_size; hid_t dtype_id = cmpd_stack[csindex].id; /*Adjust size and insert member, consider both member size and offset.*/ if(cmpd_stack[csindex].first_memb) { /*reclaim the size 1 temporarily set*/ - new_size = H5Tget_size((yyvsp[(1) - (7)].hid)) + (yyvsp[(6) - (7)].ival); + new_size = H5Tget_size((yyvsp[-6].hid)) + (yyvsp[-1].ival); H5Tset_size(dtype_id, new_size); /*member name is saved in yylval.sval by lexer*/ - H5Tinsert(dtype_id, (yyvsp[(4) - (7)].sval), (yyvsp[(6) - (7)].ival), (yyvsp[(1) - (7)].hid)); + H5Tinsert(dtype_id, (yyvsp[-3].sval), (yyvsp[-1].ival), (yyvsp[-6].hid)); cmpd_stack[csindex].first_memb = 0; } else { origin_size = H5Tget_size(dtype_id); - if((yyvsp[(6) - (7)].ival) == 0) { - new_size = origin_size + H5Tget_size((yyvsp[(1) - (7)].hid)); + if((yyvsp[-1].ival) == 0) { + new_size = origin_size + H5Tget_size((yyvsp[-6].hid)); H5Tset_size(dtype_id, new_size); - H5Tinsert(dtype_id, (yyvsp[(4) - (7)].sval), origin_size, (yyvsp[(1) - (7)].hid)); + H5Tinsert(dtype_id, (yyvsp[-3].sval), origin_size, (yyvsp[-6].hid)); } else { - new_size = (yyvsp[(6) - (7)].ival) + H5Tget_size((yyvsp[(1) - (7)].hid)); + new_size = (yyvsp[-1].ival) + H5Tget_size((yyvsp[-6].hid)); H5Tset_size(dtype_id, new_size); - H5Tinsert(dtype_id, (yyvsp[(4) - (7)].sval), (yyvsp[(6) - (7)].ival), (yyvsp[(1) - (7)].hid)); + H5Tinsert(dtype_id, (yyvsp[-3].sval), (yyvsp[-1].ival), (yyvsp[-6].hid)); } } - + if((yyvsp[-3].sval)) { + free((yyvsp[-3].sval)); + (yyvsp[-3].sval) = NULL; + } cmpd_stack[csindex].is_field = 0; - H5Tclose((yyvsp[(1) - (7)].hid)); + H5Tclose((yyvsp[-6].hid)); new_size = H5Tget_size(dtype_id); } +#line 1637 "hl/src/H5LTparse.c" break; - case 53: -/* Line 1792 of yacc.c */ -#line 199 "H5LTparse.y" - { - (yyval.sval) = yylval.sval; + case 53: /* field_name: STRING */ +#line 208 "hl/src/H5LTparse.y" + { + (yyval.sval) = strdup(yylval.sval); + free(yylval.sval); + yylval.sval = NULL; } +#line 1647 "hl/src/H5LTparse.c" break; - case 54: -/* Line 1792 of yacc.c */ -#line 204 "H5LTparse.y" - { (yyval.ival) = 0; } + case 54: /* field_offset: %empty */ +#line 215 "hl/src/H5LTparse.y" + { (yyval.ival) = 0; } +#line 1653 "hl/src/H5LTparse.c" break; - case 55: -/* Line 1792 of yacc.c */ -#line 206 "H5LTparse.y" - { (yyval.ival) = yylval.ival; } + case 55: /* field_offset: ':' offset */ +#line 217 "hl/src/H5LTparse.y" + { (yyval.ival) = yylval.ival; } +#line 1659 "hl/src/H5LTparse.c" break; - case 57: -/* Line 1792 of yacc.c */ -#line 210 "H5LTparse.y" - { asindex++; /*pushd onto the stack*/ } + case 57: /* $@3: %empty */ +#line 221 "hl/src/H5LTparse.y" + { asindex++; /*pushd onto the stack*/ } +#line 1665 "hl/src/H5LTparse.c" break; - case 58: -/* Line 1792 of yacc.c */ -#line 212 "H5LTparse.y" - { - (yyval.hid) = H5Tarray_create2((yyvsp[(5) - (6)].hid), arr_stack[asindex].ndims, arr_stack[asindex].dims); + case 58: /* array_type: H5T_ARRAY_TOKEN $@3 '{' dim_list ddl_type '}' */ +#line 223 "hl/src/H5LTparse.y" + { + (yyval.hid) = H5Tarray_create2((yyvsp[-1].hid), arr_stack[asindex].ndims, arr_stack[asindex].dims); arr_stack[asindex].ndims = 0; asindex--; - H5Tclose((yyvsp[(5) - (6)].hid)); + H5Tclose((yyvsp[-1].hid)); } +#line 1676 "hl/src/H5LTparse.c" break; - case 61: -/* Line 1792 of yacc.c */ -#line 222 "H5LTparse.y" - { arr_stack[asindex].is_dim = 1; /*notice lexer of dimension size*/ } + case 61: /* $@4: %empty */ +#line 233 "hl/src/H5LTparse.y" + { arr_stack[asindex].is_dim = 1; /*notice lexer of dimension size*/ } +#line 1682 "hl/src/H5LTparse.c" break; - case 62: -/* Line 1792 of yacc.c */ -#line 223 "H5LTparse.y" - { unsigned ndims = arr_stack[asindex].ndims; + case 62: /* $@5: %empty */ +#line 234 "hl/src/H5LTparse.y" + { unsigned ndims = arr_stack[asindex].ndims; arr_stack[asindex].dims[ndims] = (hsize_t)yylval.ival; arr_stack[asindex].ndims++; arr_stack[asindex].is_dim = 0; } +#line 1692 "hl/src/H5LTparse.c" break; - case 65: -/* Line 1792 of yacc.c */ -#line 234 "H5LTparse.y" - { (yyval.hid) = H5Tvlen_create((yyvsp[(3) - (4)].hid)); H5Tclose((yyvsp[(3) - (4)].hid)); } + case 65: /* vlen_type: H5T_VLEN_TOKEN '{' ddl_type '}' */ +#line 245 "hl/src/H5LTparse.y" + { (yyval.hid) = H5Tvlen_create((yyvsp[-1].hid)); H5Tclose((yyvsp[-1].hid)); } +#line 1698 "hl/src/H5LTparse.c" break; - case 66: -/* Line 1792 of yacc.c */ -#line 239 "H5LTparse.y" - { is_opq_size = 1; } + case 66: /* $@6: %empty */ +#line 250 "hl/src/H5LTparse.y" + { is_opq_size = 1; } +#line 1704 "hl/src/H5LTparse.c" break; - case 67: -/* Line 1792 of yacc.c */ -#line 240 "H5LTparse.y" - { + case 67: /* @7: %empty */ +#line 251 "hl/src/H5LTparse.y" + { size_t size = (size_t)yylval.ival; (yyval.hid) = H5Tcreate(H5T_OPAQUE, size); is_opq_size = 0; } +#line 1714 "hl/src/H5LTparse.c" break; - case 68: -/* Line 1792 of yacc.c */ -#line 245 "H5LTparse.y" - { is_opq_tag = 1; } + case 68: /* $@8: %empty */ +#line 256 "hl/src/H5LTparse.y" + { is_opq_tag = 1; } +#line 1720 "hl/src/H5LTparse.c" break; - case 69: -/* Line 1792 of yacc.c */ -#line 246 "H5LTparse.y" - { - H5Tset_tag((yyvsp[(7) - (13)].hid), yylval.sval); + case 69: /* $@9: %empty */ +#line 257 "hl/src/H5LTparse.y" + { + H5Tset_tag((yyvsp[-6].hid), yylval.sval); + free(yylval.sval); + yylval.sval = NULL; is_opq_tag = 0; } +#line 1731 "hl/src/H5LTparse.c" break; - case 70: -/* Line 1792 of yacc.c */ -#line 250 "H5LTparse.y" - { (yyval.hid) = (yyvsp[(7) - (15)].hid); } + case 70: /* opaque_type: H5T_OPAQUE_TOKEN '{' OPQ_SIZE_TOKEN $@6 opaque_size ';' @7 OPQ_TAG_TOKEN $@8 '"' opaque_tag '"' ';' $@9 '}' */ +#line 263 "hl/src/H5LTparse.y" + { (yyval.hid) = (yyvsp[-8].hid); } +#line 1737 "hl/src/H5LTparse.c" break; - case 73: -/* Line 1792 of yacc.c */ -#line 258 "H5LTparse.y" - { is_str_size = 1; } + case 73: /* $@10: %empty */ +#line 271 "hl/src/H5LTparse.y" + { is_str_size = 1; } +#line 1743 "hl/src/H5LTparse.c" break; - case 74: -/* Line 1792 of yacc.c */ -#line 259 "H5LTparse.y" - { - if((yyvsp[(5) - (6)].ival) == H5T_VARIABLE_TOKEN) + case 74: /* $@11: %empty */ +#line 272 "hl/src/H5LTparse.y" + { + if((yyvsp[-1].ival) == H5T_VARIABLE_TOKEN) is_variable = 1; else str_size = yylval.ival; is_str_size = 0; } +#line 1755 "hl/src/H5LTparse.c" break; - case 75: -/* Line 1792 of yacc.c */ -#line 267 "H5LTparse.y" - { - if((yyvsp[(9) - (10)].ival) == H5T_STR_NULLTERM_TOKEN) + case 75: /* $@12: %empty */ +#line 280 "hl/src/H5LTparse.y" + { + if((yyvsp[-1].ival) == H5T_STR_NULLTERM_TOKEN) str_pad = H5T_STR_NULLTERM; - else if((yyvsp[(9) - (10)].ival) == H5T_STR_NULLPAD_TOKEN) + else if((yyvsp[-1].ival) == H5T_STR_NULLPAD_TOKEN) str_pad = H5T_STR_NULLPAD; - else if((yyvsp[(9) - (10)].ival) == H5T_STR_SPACEPAD_TOKEN) + else if((yyvsp[-1].ival) == H5T_STR_SPACEPAD_TOKEN) str_pad = H5T_STR_SPACEPAD; } +#line 1768 "hl/src/H5LTparse.c" break; - case 76: -/* Line 1792 of yacc.c */ -#line 276 "H5LTparse.y" - { - if((yyvsp[(13) - (14)].ival) == H5T_CSET_ASCII_TOKEN) + case 76: /* $@13: %empty */ +#line 289 "hl/src/H5LTparse.y" + { + if((yyvsp[-1].ival) == H5T_CSET_ASCII_TOKEN) str_cset = H5T_CSET_ASCII; - else if((yyvsp[(13) - (14)].ival) == H5T_CSET_UTF8_TOKEN) + else if((yyvsp[-1].ival) == H5T_CSET_UTF8_TOKEN) str_cset = H5T_CSET_UTF8; } +#line 1779 "hl/src/H5LTparse.c" break; - case 77: -/* Line 1792 of yacc.c */ -#line 283 "H5LTparse.y" - { - if((yyvsp[(17) - (18)].hid) == H5T_C_S1_TOKEN) + case 77: /* @14: %empty */ +#line 296 "hl/src/H5LTparse.y" + { + if((yyvsp[-1].hid) == H5T_C_S1_TOKEN) (yyval.hid) = H5Tcopy(H5T_C_S1); - else if((yyvsp[(17) - (18)].hid) == H5T_FORTRAN_S1_TOKEN) + else if((yyvsp[-1].hid) == H5T_FORTRAN_S1_TOKEN) (yyval.hid) = H5Tcopy(H5T_FORTRAN_S1); } +#line 1790 "hl/src/H5LTparse.c" break; - case 78: -/* Line 1792 of yacc.c */ -#line 290 "H5LTparse.y" - { - hid_t str_id = (yyvsp[(19) - (20)].hid); + case 78: /* string_type: H5T_STRING_TOKEN '{' STRSIZE_TOKEN $@10 strsize ';' $@11 STRPAD_TOKEN strpad ';' $@12 CSET_TOKEN cset ';' $@13 CTYPE_TOKEN ctype ';' @14 '}' */ +#line 303 "hl/src/H5LTparse.y" + { + hid_t str_id = (yyvsp[-1].hid); /*set string size*/ if(is_variable) { @@ -2082,85 +1835,87 @@ yyreduce: (yyval.hid) = str_id; } +#line 1811 "hl/src/H5LTparse.c" break; - case 79: -/* Line 1792 of yacc.c */ -#line 307 "H5LTparse.y" - {(yyval.ival) = H5T_VARIABLE_TOKEN;} + case 79: /* strsize: H5T_VARIABLE_TOKEN */ +#line 320 "hl/src/H5LTparse.y" + {(yyval.ival) = H5T_VARIABLE_TOKEN;} +#line 1817 "hl/src/H5LTparse.c" break; - case 81: -/* Line 1792 of yacc.c */ -#line 310 "H5LTparse.y" - {(yyval.ival) = H5T_STR_NULLTERM_TOKEN;} + case 81: /* strpad: H5T_STR_NULLTERM_TOKEN */ +#line 323 "hl/src/H5LTparse.y" + {(yyval.ival) = H5T_STR_NULLTERM_TOKEN;} +#line 1823 "hl/src/H5LTparse.c" break; - case 82: -/* Line 1792 of yacc.c */ -#line 311 "H5LTparse.y" - {(yyval.ival) = H5T_STR_NULLPAD_TOKEN;} + case 82: /* strpad: H5T_STR_NULLPAD_TOKEN */ +#line 324 "hl/src/H5LTparse.y" + {(yyval.ival) = H5T_STR_NULLPAD_TOKEN;} +#line 1829 "hl/src/H5LTparse.c" break; - case 83: -/* Line 1792 of yacc.c */ -#line 312 "H5LTparse.y" - {(yyval.ival) = H5T_STR_SPACEPAD_TOKEN;} + case 83: /* strpad: H5T_STR_SPACEPAD_TOKEN */ +#line 325 "hl/src/H5LTparse.y" + {(yyval.ival) = H5T_STR_SPACEPAD_TOKEN;} +#line 1835 "hl/src/H5LTparse.c" break; - case 84: -/* Line 1792 of yacc.c */ -#line 314 "H5LTparse.y" - {(yyval.ival) = H5T_CSET_ASCII_TOKEN;} + case 84: /* cset: H5T_CSET_ASCII_TOKEN */ +#line 327 "hl/src/H5LTparse.y" + {(yyval.ival) = H5T_CSET_ASCII_TOKEN;} +#line 1841 "hl/src/H5LTparse.c" break; - case 85: -/* Line 1792 of yacc.c */ -#line 315 "H5LTparse.y" - {(yyval.ival) = H5T_CSET_UTF8_TOKEN;} + case 85: /* cset: H5T_CSET_UTF8_TOKEN */ +#line 328 "hl/src/H5LTparse.y" + {(yyval.ival) = H5T_CSET_UTF8_TOKEN;} +#line 1847 "hl/src/H5LTparse.c" break; - case 86: -/* Line 1792 of yacc.c */ -#line 317 "H5LTparse.y" - {(yyval.hid) = H5T_C_S1_TOKEN;} + case 86: /* ctype: H5T_C_S1_TOKEN */ +#line 330 "hl/src/H5LTparse.y" + {(yyval.hid) = H5T_C_S1_TOKEN;} +#line 1853 "hl/src/H5LTparse.c" break; - case 87: -/* Line 1792 of yacc.c */ -#line 318 "H5LTparse.y" - {(yyval.hid) = H5T_FORTRAN_S1_TOKEN;} + case 87: /* ctype: H5T_FORTRAN_S1_TOKEN */ +#line 331 "hl/src/H5LTparse.y" + {(yyval.hid) = H5T_FORTRAN_S1_TOKEN;} +#line 1859 "hl/src/H5LTparse.c" break; - case 88: -/* Line 1792 of yacc.c */ -#line 322 "H5LTparse.y" - { is_enum = 1; enum_id = H5Tenum_create((yyvsp[(3) - (4)].hid)); H5Tclose((yyvsp[(3) - (4)].hid)); } + case 88: /* $@15: %empty */ +#line 335 "hl/src/H5LTparse.y" + { is_enum = 1; enum_id = H5Tenum_create((yyvsp[-1].hid)); H5Tclose((yyvsp[-1].hid)); } +#line 1865 "hl/src/H5LTparse.c" break; - case 89: -/* Line 1792 of yacc.c */ -#line 324 "H5LTparse.y" - { is_enum = 0; /*reset*/ (yyval.hid) = enum_id; } + case 89: /* enum_type: H5T_ENUM_TOKEN '{' integer_type ';' $@15 enum_list '}' */ +#line 337 "hl/src/H5LTparse.y" + { is_enum = 0; /*reset*/ (yyval.hid) = enum_id; } +#line 1871 "hl/src/H5LTparse.c" break; - case 92: -/* Line 1792 of yacc.c */ -#line 329 "H5LTparse.y" - { + case 92: /* $@16: %empty */ +#line 342 "hl/src/H5LTparse.y" + { is_enum_memb = 1; /*indicate member of enum*/ #ifdef H5_HAVE_WIN32_API enum_memb_symbol = _strdup(yylval.sval); #else /* H5_HAVE_WIN32_API */ enum_memb_symbol = strdup(yylval.sval); #endif /* H5_HAVE_WIN32_API */ + free(yylval.sval); + yylval.sval = NULL; } +#line 1886 "hl/src/H5LTparse.c" break; - case 93: -/* Line 1792 of yacc.c */ -#line 338 "H5LTparse.y" - { + case 93: /* enum_def: '"' enum_symbol '"' $@16 enum_val ';' */ +#line 353 "hl/src/H5LTparse.y" + { char char_val=(char)yylval.ival; short short_val=(short)yylval.ival; int int_val=(int)yylval.ival; @@ -2202,11 +1957,12 @@ yyreduce: H5Tclose(super); H5Tclose(native); } +#line 1933 "hl/src/H5LTparse.c" break; -/* Line 1792 of yacc.c */ -#line 2191 "H5LTparse.c" +#line 1937 "hl/src/H5LTparse.c" + default: break; } /* User semantic actions sometimes alter yychar, and that requires @@ -2220,96 +1976,58 @@ yyreduce: case of YYERROR or YYBACKUP, subsequent parser actions might lead to an incorrect destructor call or verbose syntax error message before the lookahead is translated. */ - YY_SYMBOL_PRINT ("-> $$ =", yyr1[yyn], &yyval, &yyloc); + YY_SYMBOL_PRINT ("-> $$ =", YY_CAST (yysymbol_kind_t, yyr1[yyn]), &yyval, &yyloc); YYPOPSTACK (yylen); yylen = 0; - YY_STACK_PRINT (yyss, yyssp); *++yyvsp = yyval; - /* Now `shift' the result of the reduction. Determine what state + /* Now 'shift' the result of the reduction. Determine what state that goes to, based on the state we popped back to and the rule number reduced by. */ - - yyn = yyr1[yyn]; - - yystate = yypgoto[yyn - YYNTOKENS] + *yyssp; - if (0 <= yystate && yystate <= YYLAST && yycheck[yystate] == *yyssp) - yystate = yytable[yystate]; - else - yystate = yydefgoto[yyn - YYNTOKENS]; + { + const int yylhs = yyr1[yyn] - YYNTOKENS; + const int yyi = yypgoto[yylhs] + *yyssp; + yystate = (0 <= yyi && yyi <= YYLAST && yycheck[yyi] == *yyssp + ? yytable[yyi] + : yydefgoto[yylhs]); + } goto yynewstate; -/*------------------------------------. -| yyerrlab -- here on detecting error | -`------------------------------------*/ +/*--------------------------------------. +| yyerrlab -- here on detecting error. | +`--------------------------------------*/ yyerrlab: /* Make sure we have latest lookahead translation. See comments at user semantic actions for why this is necessary. */ - yytoken = yychar == YYEMPTY ? YYEMPTY : YYTRANSLATE (yychar); - + yytoken = yychar == YYEMPTY ? YYSYMBOL_YYEMPTY : YYTRANSLATE (yychar); /* If not already recovering from an error, report this error. */ if (!yyerrstatus) { ++yynerrs; -#if ! YYERROR_VERBOSE yyerror (YY_("syntax error")); -#else -# define YYSYNTAX_ERROR yysyntax_error (&yymsg_alloc, &yymsg, \ - yyssp, yytoken) - { - char const *yymsgp = YY_("syntax error"); - int yysyntax_error_status; - yysyntax_error_status = YYSYNTAX_ERROR; - if (yysyntax_error_status == 0) - yymsgp = yymsg; - else if (yysyntax_error_status == 1) - { - if (yymsg != yymsgbuf) - YYSTACK_FREE (yymsg); - yymsg = (char *) YYSTACK_ALLOC (yymsg_alloc); - if (!yymsg) - { - yymsg = yymsgbuf; - yymsg_alloc = sizeof yymsgbuf; - yysyntax_error_status = 2; - } - else - { - yysyntax_error_status = YYSYNTAX_ERROR; - yymsgp = yymsg; - } - } - yyerror (yymsgp); - if (yysyntax_error_status == 2) - goto yyexhaustedlab; - } -# undef YYSYNTAX_ERROR -#endif } - - if (yyerrstatus == 3) { /* If just tried and failed to reuse lookahead token after an - error, discard it. */ + error, discard it. */ if (yychar <= YYEOF) - { - /* Return failure if at end of input. */ - if (yychar == YYEOF) - YYABORT; - } + { + /* Return failure if at end of input. */ + if (yychar == YYEOF) + YYABORT; + } else - { - yydestruct ("Error: discarding", - yytoken, &yylval); - yychar = YYEMPTY; - } + { + yydestruct ("Error: discarding", + yytoken, &yylval); + yychar = YYEMPTY; + } } /* Else will try to reuse lookahead token after shifting the error @@ -2321,14 +2039,12 @@ yyerrlab: | yyerrorlab -- error raised explicitly by YYERROR. | `---------------------------------------------------*/ yyerrorlab: + /* Pacify compilers when the user code never invokes YYERROR and the + label yyerrorlab therefore never appears in user code. */ + if (0) + YYERROR; - /* Pacify compilers like GCC when the user code never invokes - YYERROR and the label yyerrorlab therefore never appears in user - code. */ - if (/*CONSTCOND*/ 0) - goto yyerrorlab; - - /* Do not reclaim the symbols of the rule which action triggered + /* Do not reclaim the symbols of the rule whose action triggered this YYERROR. */ YYPOPSTACK (yylen); yylen = 0; @@ -2341,29 +2057,30 @@ yyerrorlab: | yyerrlab1 -- common code for both syntax error and YYERROR. | `-------------------------------------------------------------*/ yyerrlab1: - yyerrstatus = 3; /* Each real token shifted decrements this. */ + yyerrstatus = 3; /* Each real token shifted decrements this. */ + /* Pop stack until we find a state that shifts the error token. */ for (;;) { yyn = yypact[yystate]; if (!yypact_value_is_default (yyn)) - { - yyn += YYTERROR; - if (0 <= yyn && yyn <= YYLAST && yycheck[yyn] == YYTERROR) - { - yyn = yytable[yyn]; - if (0 < yyn) - break; - } - } + { + yyn += YYSYMBOL_YYerror; + if (0 <= yyn && yyn <= YYLAST && yycheck[yyn] == YYSYMBOL_YYerror) + { + yyn = yytable[yyn]; + if (0 < yyn) + break; + } + } /* Pop the current state because it cannot handle the error token. */ if (yyssp == yyss) - YYABORT; + YYABORT; yydestruct ("Error: popping", - yystos[yystate], yyvsp); + YY_ACCESSING_SYMBOL (yystate), yyvsp); YYPOPSTACK (1); yystate = *yyssp; YY_STACK_PRINT (yyss, yyssp); @@ -2375,7 +2092,7 @@ yyerrlab1: /* Shift the error token. */ - YY_SYMBOL_PRINT ("Shifting", yystos[yyn], yyvsp, yylsp); + YY_SYMBOL_PRINT ("Shifting", YY_ACCESSING_SYMBOL (yyn), yyvsp, yylsp); yystate = yyn; goto yynewstate; @@ -2388,6 +2105,7 @@ yyacceptlab: yyresult = 0; goto yyreturn; + /*-----------------------------------. | yyabortlab -- YYABORT comes here. | `-----------------------------------*/ @@ -2395,16 +2113,21 @@ yyabortlab: yyresult = 1; goto yyreturn; -#if !defined yyoverflow || YYERROR_VERBOSE + +#if !defined yyoverflow /*-------------------------------------------------. | yyexhaustedlab -- memory exhaustion comes here. | `-------------------------------------------------*/ yyexhaustedlab: yyerror (YY_("memory exhausted")); yyresult = 2; - /* Fall through. */ + goto yyreturn; #endif + +/*-------------------------------------------------------. +| yyreturn -- parsing is finished, clean up and return. | +`-------------------------------------------------------*/ yyreturn: if (yychar != YYEMPTY) { @@ -2414,26 +2137,21 @@ yyreturn: yydestruct ("Cleanup: discarding lookahead", yytoken, &yylval); } - /* Do not reclaim the symbols of the rule which action triggered + /* Do not reclaim the symbols of the rule whose action triggered this YYABORT or YYACCEPT. */ YYPOPSTACK (yylen); YY_STACK_PRINT (yyss, yyssp); while (yyssp != yyss) { yydestruct ("Cleanup: popping", - yystos[*yyssp], yyvsp); + YY_ACCESSING_SYMBOL (+*yyssp), yyvsp); YYPOPSTACK (1); } #ifndef yyoverflow if (yyss != yyssa) YYSTACK_FREE (yyss); #endif -#if YYERROR_VERBOSE - if (yymsg != yymsgbuf) - YYSTACK_FREE (yymsg); -#endif - /* Make sure YYID is used. */ - return YYID (yyresult); -} + return yyresult; +} diff --git a/hl/src/H5LTparse.h b/hl/src/H5LTparse.h index 7481a45..abff969 100644 --- a/hl/src/H5LTparse.h +++ b/hl/src/H5LTparse.h @@ -1,19 +1,20 @@ -/* A Bison parser, made by GNU Bison 2.7. */ +/* A Bison parser, made by GNU Bison 3.7.2. */ /* Bison interface for Yacc-like parsers in C - - Copyright (C) 1984, 1989-1990, 2000-2012 Free Software Foundation, Inc. - + + Copyright (C) 1984, 1989-1990, 2000-2015, 2018-2020 Free Software Foundation, + Inc. + This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. - + This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. - + You should have received a copy of the GNU General Public License along with this program. If not, see <http://www.gnu.org/licenses/>. */ @@ -26,13 +27,17 @@ special exception, which will cause the skeleton and the resulting Bison output files to be licensed under the GNU General Public License without this special exception. - + This special exception was added by the Free Software Foundation in version 2.2 of Bison. */ -#ifndef YY_H5LTYY_H5LTPARSE_H_INCLUDED -# define YY_H5LTYY_H5LTPARSE_H_INCLUDED -/* Enabling traces. */ +/* DO NOT RELY ON FEATURES THAT ARE NOT DOCUMENTED in the manual, + especially those whose name start with YY_ or yy_. They are + private implementation details that can be changed or removed. */ + +#ifndef YY_H5LTYY_HL_SRC_H5LTPARSE_H_INCLUDED +# define YY_H5LTYY_HL_SRC_H5LTPARSE_H_INCLUDED +/* Debug traces. */ #ifndef YYDEBUG # define YYDEBUG 0 #endif @@ -40,105 +45,96 @@ extern int H5LTyydebug; #endif -/* Tokens. */ +/* Token kinds. */ #ifndef YYTOKENTYPE # define YYTOKENTYPE - /* Put the tokens into the symbol table, so that GDB and other debuggers - know about them. */ - enum yytokentype { - H5T_STD_I8BE_TOKEN = 258, - H5T_STD_I8LE_TOKEN = 259, - H5T_STD_I16BE_TOKEN = 260, - H5T_STD_I16LE_TOKEN = 261, - H5T_STD_I32BE_TOKEN = 262, - H5T_STD_I32LE_TOKEN = 263, - H5T_STD_I64BE_TOKEN = 264, - H5T_STD_I64LE_TOKEN = 265, - H5T_STD_U8BE_TOKEN = 266, - H5T_STD_U8LE_TOKEN = 267, - H5T_STD_U16BE_TOKEN = 268, - H5T_STD_U16LE_TOKEN = 269, - H5T_STD_U32BE_TOKEN = 270, - H5T_STD_U32LE_TOKEN = 271, - H5T_STD_U64BE_TOKEN = 272, - H5T_STD_U64LE_TOKEN = 273, - H5T_NATIVE_CHAR_TOKEN = 274, - H5T_NATIVE_SCHAR_TOKEN = 275, - H5T_NATIVE_UCHAR_TOKEN = 276, - H5T_NATIVE_SHORT_TOKEN = 277, - H5T_NATIVE_USHORT_TOKEN = 278, - H5T_NATIVE_INT_TOKEN = 279, - H5T_NATIVE_UINT_TOKEN = 280, - H5T_NATIVE_LONG_TOKEN = 281, - H5T_NATIVE_ULONG_TOKEN = 282, - H5T_NATIVE_LLONG_TOKEN = 283, - H5T_NATIVE_ULLONG_TOKEN = 284, - H5T_IEEE_F32BE_TOKEN = 285, - H5T_IEEE_F32LE_TOKEN = 286, - H5T_IEEE_F64BE_TOKEN = 287, - H5T_IEEE_F64LE_TOKEN = 288, - H5T_NATIVE_FLOAT_TOKEN = 289, - H5T_NATIVE_DOUBLE_TOKEN = 290, - H5T_NATIVE_LDOUBLE_TOKEN = 291, - H5T_STRING_TOKEN = 292, - STRSIZE_TOKEN = 293, - STRPAD_TOKEN = 294, - CSET_TOKEN = 295, - CTYPE_TOKEN = 296, - H5T_VARIABLE_TOKEN = 297, - H5T_STR_NULLTERM_TOKEN = 298, - H5T_STR_NULLPAD_TOKEN = 299, - H5T_STR_SPACEPAD_TOKEN = 300, - H5T_CSET_ASCII_TOKEN = 301, - H5T_CSET_UTF8_TOKEN = 302, - H5T_C_S1_TOKEN = 303, - H5T_FORTRAN_S1_TOKEN = 304, - H5T_OPAQUE_TOKEN = 305, - OPQ_SIZE_TOKEN = 306, - OPQ_TAG_TOKEN = 307, - H5T_COMPOUND_TOKEN = 308, - H5T_ENUM_TOKEN = 309, - H5T_ARRAY_TOKEN = 310, - H5T_VLEN_TOKEN = 311, - STRING = 312, - NUMBER = 313 - }; + enum yytokentype + { + YYEMPTY = -2, + YYEOF = 0, /* "end of file" */ + YYerror = 256, /* error */ + YYUNDEF = 257, /* "invalid token" */ + H5T_STD_I8BE_TOKEN = 258, /* H5T_STD_I8BE_TOKEN */ + H5T_STD_I8LE_TOKEN = 259, /* H5T_STD_I8LE_TOKEN */ + H5T_STD_I16BE_TOKEN = 260, /* H5T_STD_I16BE_TOKEN */ + H5T_STD_I16LE_TOKEN = 261, /* H5T_STD_I16LE_TOKEN */ + H5T_STD_I32BE_TOKEN = 262, /* H5T_STD_I32BE_TOKEN */ + H5T_STD_I32LE_TOKEN = 263, /* H5T_STD_I32LE_TOKEN */ + H5T_STD_I64BE_TOKEN = 264, /* H5T_STD_I64BE_TOKEN */ + H5T_STD_I64LE_TOKEN = 265, /* H5T_STD_I64LE_TOKEN */ + H5T_STD_U8BE_TOKEN = 266, /* H5T_STD_U8BE_TOKEN */ + H5T_STD_U8LE_TOKEN = 267, /* H5T_STD_U8LE_TOKEN */ + H5T_STD_U16BE_TOKEN = 268, /* H5T_STD_U16BE_TOKEN */ + H5T_STD_U16LE_TOKEN = 269, /* H5T_STD_U16LE_TOKEN */ + H5T_STD_U32BE_TOKEN = 270, /* H5T_STD_U32BE_TOKEN */ + H5T_STD_U32LE_TOKEN = 271, /* H5T_STD_U32LE_TOKEN */ + H5T_STD_U64BE_TOKEN = 272, /* H5T_STD_U64BE_TOKEN */ + H5T_STD_U64LE_TOKEN = 273, /* H5T_STD_U64LE_TOKEN */ + H5T_NATIVE_CHAR_TOKEN = 274, /* H5T_NATIVE_CHAR_TOKEN */ + H5T_NATIVE_SCHAR_TOKEN = 275, /* H5T_NATIVE_SCHAR_TOKEN */ + H5T_NATIVE_UCHAR_TOKEN = 276, /* H5T_NATIVE_UCHAR_TOKEN */ + H5T_NATIVE_SHORT_TOKEN = 277, /* H5T_NATIVE_SHORT_TOKEN */ + H5T_NATIVE_USHORT_TOKEN = 278, /* H5T_NATIVE_USHORT_TOKEN */ + H5T_NATIVE_INT_TOKEN = 279, /* H5T_NATIVE_INT_TOKEN */ + H5T_NATIVE_UINT_TOKEN = 280, /* H5T_NATIVE_UINT_TOKEN */ + H5T_NATIVE_LONG_TOKEN = 281, /* H5T_NATIVE_LONG_TOKEN */ + H5T_NATIVE_ULONG_TOKEN = 282, /* H5T_NATIVE_ULONG_TOKEN */ + H5T_NATIVE_LLONG_TOKEN = 283, /* H5T_NATIVE_LLONG_TOKEN */ + H5T_NATIVE_ULLONG_TOKEN = 284, /* H5T_NATIVE_ULLONG_TOKEN */ + H5T_IEEE_F32BE_TOKEN = 285, /* H5T_IEEE_F32BE_TOKEN */ + H5T_IEEE_F32LE_TOKEN = 286, /* H5T_IEEE_F32LE_TOKEN */ + H5T_IEEE_F64BE_TOKEN = 287, /* H5T_IEEE_F64BE_TOKEN */ + H5T_IEEE_F64LE_TOKEN = 288, /* H5T_IEEE_F64LE_TOKEN */ + H5T_NATIVE_FLOAT_TOKEN = 289, /* H5T_NATIVE_FLOAT_TOKEN */ + H5T_NATIVE_DOUBLE_TOKEN = 290, /* H5T_NATIVE_DOUBLE_TOKEN */ + H5T_NATIVE_LDOUBLE_TOKEN = 291, /* H5T_NATIVE_LDOUBLE_TOKEN */ + H5T_STRING_TOKEN = 292, /* H5T_STRING_TOKEN */ + STRSIZE_TOKEN = 293, /* STRSIZE_TOKEN */ + STRPAD_TOKEN = 294, /* STRPAD_TOKEN */ + CSET_TOKEN = 295, /* CSET_TOKEN */ + CTYPE_TOKEN = 296, /* CTYPE_TOKEN */ + H5T_VARIABLE_TOKEN = 297, /* H5T_VARIABLE_TOKEN */ + H5T_STR_NULLTERM_TOKEN = 298, /* H5T_STR_NULLTERM_TOKEN */ + H5T_STR_NULLPAD_TOKEN = 299, /* H5T_STR_NULLPAD_TOKEN */ + H5T_STR_SPACEPAD_TOKEN = 300, /* H5T_STR_SPACEPAD_TOKEN */ + H5T_CSET_ASCII_TOKEN = 301, /* H5T_CSET_ASCII_TOKEN */ + H5T_CSET_UTF8_TOKEN = 302, /* H5T_CSET_UTF8_TOKEN */ + H5T_C_S1_TOKEN = 303, /* H5T_C_S1_TOKEN */ + H5T_FORTRAN_S1_TOKEN = 304, /* H5T_FORTRAN_S1_TOKEN */ + H5T_OPAQUE_TOKEN = 305, /* H5T_OPAQUE_TOKEN */ + OPQ_SIZE_TOKEN = 306, /* OPQ_SIZE_TOKEN */ + OPQ_TAG_TOKEN = 307, /* OPQ_TAG_TOKEN */ + H5T_COMPOUND_TOKEN = 308, /* H5T_COMPOUND_TOKEN */ + H5T_ENUM_TOKEN = 309, /* H5T_ENUM_TOKEN */ + H5T_ARRAY_TOKEN = 310, /* H5T_ARRAY_TOKEN */ + H5T_VLEN_TOKEN = 311, /* H5T_VLEN_TOKEN */ + STRING = 312, /* STRING */ + NUMBER = 313 /* NUMBER */ + }; + typedef enum yytokentype yytoken_kind_t; #endif - +/* Value type. */ #if ! defined YYSTYPE && ! defined YYSTYPE_IS_DECLARED -typedef union YYSTYPE +union YYSTYPE { -/* Line 2058 of yacc.c */ -#line 66 "H5LTparse.y" +#line 72 "hl/src/H5LTparse.y" int ival; /*for integer token*/ char *sval; /*for name string*/ hid_t hid; /*for hid_t token*/ +#line 128 "hl/src/H5LTparse.h" -/* Line 2058 of yacc.c */ -#line 122 "H5LTparse.h" -} YYSTYPE; +}; +typedef union YYSTYPE YYSTYPE; # define YYSTYPE_IS_TRIVIAL 1 -# define yystype YYSTYPE /* obsolescent; will be withdrawn */ # define YYSTYPE_IS_DECLARED 1 #endif + extern YYSTYPE H5LTyylval; -#ifdef YYPARSE_PARAM -#if defined __STDC__ || defined __cplusplus -int H5LTyyparse (void *YYPARSE_PARAM); -#else -int H5LTyyparse (); -#endif -#else /* ! YYPARSE_PARAM */ -#if defined __STDC__ || defined __cplusplus -int H5LTyyparse (void); -#else -int H5LTyyparse (); -#endif -#endif /* ! YYPARSE_PARAM */ +hid_t H5LTyyparse (void); -#endif /* !YY_H5LTYY_H5LTPARSE_H_INCLUDED */ +#endif /* !YY_H5LTYY_HL_SRC_H5LTPARSE_H_INCLUDED */ diff --git a/hl/src/H5LTparse.y b/hl/src/H5LTparse.y index 0022174..306d8c9 100644 --- a/hl/src/H5LTparse.y +++ b/hl/src/H5LTparse.y @@ -6,11 +6,17 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ +/* NOTE! + * + * If you make any changes to H5LTparse.y, please run bin/genparser to + * recreate the output files. + */ + %{ #include <stdio.h> #include <string.h> @@ -188,7 +194,10 @@ memb_def : ddl_type { cmpd_stack[csindex].is_field = 1; /*notify le H5Tinsert(dtype_id, $<sval>4, $<ival>6, $<hid>1); } } - + if($<sval>4) { + free($<sval>4); + $<sval>4 = NULL; + } cmpd_stack[csindex].is_field = 0; H5Tclose($<hid>1); @@ -197,7 +206,9 @@ memb_def : ddl_type { cmpd_stack[csindex].is_field = 1; /*notify le ; field_name : STRING { - $<sval>$ = yylval.sval; + $<sval>$ = strdup(yylval.sval); + free(yylval.sval); + yylval.sval = NULL; } ; field_offset : /*empty*/ @@ -245,6 +256,8 @@ opaque_type : H5T_OPAQUE_TOKEN OPQ_TAG_TOKEN { is_opq_tag = 1; } '"' opaque_tag '"' ';' { H5Tset_tag($<hid>7, yylval.sval); + free(yylval.sval); + yylval.sval = NULL; is_opq_tag = 0; } '}' { $<hid>$ = $<hid>7; } @@ -333,6 +346,8 @@ enum_def : '"' enum_symbol '"' { #else /* H5_HAVE_WIN32_API */ enum_memb_symbol = strdup(yylval.sval); #endif /* H5_HAVE_WIN32_API */ + free(yylval.sval); + yylval.sval = NULL; } enum_val ';' { diff --git a/hl/src/H5LTprivate.h b/hl/src/H5LTprivate.h index 01c5ee6..ddcbbbf 100644 --- a/hl/src/H5LTprivate.h +++ b/hl/src/H5LTprivate.h @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -25,26 +25,17 @@ *------------------------------------------------------------------------- */ -H5_HLDLL herr_t H5LT_get_attribute_disk( hid_t obj_id, - const char *attr_name, - void *data ); +H5_HLDLL herr_t H5LT_get_attribute_disk(hid_t obj_id, const char *attr_name, void *data); -H5_HLDLL herr_t H5LT_set_attribute_numerical( hid_t loc_id, - const char *obj_name, - const char *attr_name, - size_t size, - hid_t type_id, - const void *data ); +H5_HLDLL herr_t H5LT_set_attribute_numerical(hid_t loc_id, const char *obj_name, const char *attr_name, + size_t size, hid_t type_id, const void *data); -H5_HLDLL herr_t H5LT_set_attribute_string( hid_t dset_id, - const char *name, - const char *buf ); +H5_HLDLL herr_t H5LT_set_attribute_string(hid_t dset_id, const char *name, const char *buf); -H5_HLDLL herr_t H5LT_find_attribute( hid_t loc_id, const char *name ); +H5_HLDLL herr_t H5LT_find_attribute(hid_t loc_id, const char *name); - -H5_HLDLL char* H5LT_dtype_to_text(hid_t dtype, char *dt_str, H5LT_lang_t lang, - size_t *slen, hbool_t no_user_buf); +H5_HLDLL char *H5LT_dtype_to_text(hid_t dtype, char *dt_str, H5LT_lang_t lang, size_t *slen, + hbool_t no_user_buf); H5_HLDLL hid_t H5LTyyparse(void); diff --git a/hl/src/H5LTpublic.h b/hl/src/H5LTpublic.h index 47be98a..417fce8 100644 --- a/hl/src/H5LTpublic.h +++ b/hl/src/H5LTpublic.h @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -15,13 +15,13 @@ #define _H5LTpublic_H /* Flag definitions for H5LTopen_file_image() */ -#define H5LT_FILE_IMAGE_OPEN_RW 0x0001 /* Open image for read-write */ -#define H5LT_FILE_IMAGE_DONT_COPY 0x0002 /* The HDF5 lib won't copy */ +#define H5LT_FILE_IMAGE_OPEN_RW 0x0001 /* Open image for read-write */ +#define H5LT_FILE_IMAGE_DONT_COPY 0x0002 /* The HDF5 lib won't copy */ /* user supplied image buffer. The same image is open with the core driver. */ #define H5LT_FILE_IMAGE_DONT_RELEASE 0x0004 /* The HDF5 lib won't */ /* deallocate user supplied image buffer. The user application is reponsible */ -/* for doing so. */ -#define H5LT_FILE_IMAGE_ALL 0x0007 +/* for doing so. */ +#define H5LT_FILE_IMAGE_ALL 0x0007 typedef enum H5LT_lang_t { H5LT_LANG_ERR = -1, /*this is the first*/ @@ -42,53 +42,28 @@ extern "C" { *------------------------------------------------------------------------- */ -H5_HLDLL herr_t H5LTmake_dataset( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - hid_t type_id, - const void *buffer ); - -H5_HLDLL herr_t H5LTmake_dataset_char( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - const char *buffer ); - -H5_HLDLL herr_t H5LTmake_dataset_short( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - const short *buffer ); - -H5_HLDLL herr_t H5LTmake_dataset_int( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - const int *buffer ); - -H5_HLDLL herr_t H5LTmake_dataset_long( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - const long *buffer ); - -H5_HLDLL herr_t H5LTmake_dataset_float( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - const float *buffer ); - -H5_HLDLL herr_t H5LTmake_dataset_double( hid_t loc_id, - const char *dset_name, - int rank, - const hsize_t *dims, - const double *buffer ); - -H5_HLDLL herr_t H5LTmake_dataset_string( hid_t loc_id, - const char *dset_name, - const char *buf ); +H5_HLDLL herr_t H5LTmake_dataset(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, + hid_t type_id, const void *buffer); +H5_HLDLL herr_t H5LTmake_dataset_char(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, + const char *buffer); + +H5_HLDLL herr_t H5LTmake_dataset_short(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, + const short *buffer); + +H5_HLDLL herr_t H5LTmake_dataset_int(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, + const int *buffer); + +H5_HLDLL herr_t H5LTmake_dataset_long(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, + const long *buffer); + +H5_HLDLL herr_t H5LTmake_dataset_float(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, + const float *buffer); + +H5_HLDLL herr_t H5LTmake_dataset_double(hid_t loc_id, const char *dset_name, int rank, const hsize_t *dims, + const double *buffer); + +H5_HLDLL herr_t H5LTmake_dataset_string(hid_t loc_id, const char *dset_name, const char *buf); /*------------------------------------------------------------------------- * @@ -97,38 +72,21 @@ H5_HLDLL herr_t H5LTmake_dataset_string( hid_t loc_id, *------------------------------------------------------------------------- */ -H5_HLDLL herr_t H5LTread_dataset( hid_t loc_id, - const char *dset_name, - hid_t type_id, - void *buffer ); +H5_HLDLL herr_t H5LTread_dataset(hid_t loc_id, const char *dset_name, hid_t type_id, void *buffer); -H5_HLDLL herr_t H5LTread_dataset_char( hid_t loc_id, - const char *dset_name, - char *buffer ); +H5_HLDLL herr_t H5LTread_dataset_char(hid_t loc_id, const char *dset_name, char *buffer); -H5_HLDLL herr_t H5LTread_dataset_short( hid_t loc_id, - const char *dset_name, - short *buffer ); +H5_HLDLL herr_t H5LTread_dataset_short(hid_t loc_id, const char *dset_name, short *buffer); -H5_HLDLL herr_t H5LTread_dataset_int( hid_t loc_id, - const char *dset_name, - int *buffer ); +H5_HLDLL herr_t H5LTread_dataset_int(hid_t loc_id, const char *dset_name, int *buffer); -H5_HLDLL herr_t H5LTread_dataset_long( hid_t loc_id, - const char *dset_name, - long *buffer ); +H5_HLDLL herr_t H5LTread_dataset_long(hid_t loc_id, const char *dset_name, long *buffer); -H5_HLDLL herr_t H5LTread_dataset_float( hid_t loc_id, - const char *dset_name, - float *buffer ); +H5_HLDLL herr_t H5LTread_dataset_float(hid_t loc_id, const char *dset_name, float *buffer); -H5_HLDLL herr_t H5LTread_dataset_double( hid_t loc_id, - const char *dset_name, - double *buffer ); +H5_HLDLL herr_t H5LTread_dataset_double(hid_t loc_id, const char *dset_name, double *buffer); -H5_HLDLL herr_t H5LTread_dataset_string( hid_t loc_id, - const char *dset_name, - char *buf ); +H5_HLDLL herr_t H5LTread_dataset_string(hid_t loc_id, const char *dset_name, char *buf); /*------------------------------------------------------------------------- * @@ -137,20 +95,12 @@ H5_HLDLL herr_t H5LTread_dataset_string( hid_t loc_id, *------------------------------------------------------------------------- */ +H5_HLDLL herr_t H5LTget_dataset_ndims(hid_t loc_id, const char *dset_name, int *rank); -H5_HLDLL herr_t H5LTget_dataset_ndims( hid_t loc_id, - const char *dset_name, - int *rank ); - -H5_HLDLL herr_t H5LTget_dataset_info( hid_t loc_id, - const char *dset_name, - hsize_t *dims, - H5T_class_t *type_class, - size_t *type_size ); - -H5_HLDLL herr_t H5LTfind_dataset( hid_t loc_id, const char *name ); - +H5_HLDLL herr_t H5LTget_dataset_info(hid_t loc_id, const char *dset_name, hsize_t *dims, + H5T_class_t *type_class, size_t *type_size); +H5_HLDLL herr_t H5LTfind_dataset(hid_t loc_id, const char *name); /*------------------------------------------------------------------------- * @@ -159,77 +109,41 @@ H5_HLDLL herr_t H5LTfind_dataset( hid_t loc_id, const char *name ); *------------------------------------------------------------------------- */ +H5_HLDLL herr_t H5LTset_attribute_string(hid_t loc_id, const char *obj_name, const char *attr_name, + const char *attr_data); + +H5_HLDLL herr_t H5LTset_attribute_char(hid_t loc_id, const char *obj_name, const char *attr_name, + const char *buffer, size_t size); + +H5_HLDLL herr_t H5LTset_attribute_uchar(hid_t loc_id, const char *obj_name, const char *attr_name, + const unsigned char *buffer, size_t size); + +H5_HLDLL herr_t H5LTset_attribute_short(hid_t loc_id, const char *obj_name, const char *attr_name, + const short *buffer, size_t size); + +H5_HLDLL herr_t H5LTset_attribute_ushort(hid_t loc_id, const char *obj_name, const char *attr_name, + const unsigned short *buffer, size_t size); + +H5_HLDLL herr_t H5LTset_attribute_int(hid_t loc_id, const char *obj_name, const char *attr_name, + const int *buffer, size_t size); + +H5_HLDLL herr_t H5LTset_attribute_uint(hid_t loc_id, const char *obj_name, const char *attr_name, + const unsigned int *buffer, size_t size); + +H5_HLDLL herr_t H5LTset_attribute_long(hid_t loc_id, const char *obj_name, const char *attr_name, + const long *buffer, size_t size); + +H5_HLDLL herr_t H5LTset_attribute_long_long(hid_t loc_id, const char *obj_name, const char *attr_name, + const long long *buffer, size_t size); + +H5_HLDLL herr_t H5LTset_attribute_ulong(hid_t loc_id, const char *obj_name, const char *attr_name, + const unsigned long *buffer, size_t size); + +H5_HLDLL herr_t H5LTset_attribute_float(hid_t loc_id, const char *obj_name, const char *attr_name, + const float *buffer, size_t size); -H5_HLDLL herr_t H5LTset_attribute_string( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const char *attr_data ); - -H5_HLDLL herr_t H5LTset_attribute_char( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const char *buffer, - size_t size ); - -H5_HLDLL herr_t H5LTset_attribute_uchar( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const unsigned char *buffer, - size_t size ); - -H5_HLDLL herr_t H5LTset_attribute_short( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const short *buffer, - size_t size ); - -H5_HLDLL herr_t H5LTset_attribute_ushort( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const unsigned short *buffer, - size_t size ); - -H5_HLDLL herr_t H5LTset_attribute_int( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const int *buffer, - size_t size ); - -H5_HLDLL herr_t H5LTset_attribute_uint( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const unsigned int *buffer, - size_t size ); - -H5_HLDLL herr_t H5LTset_attribute_long( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const long *buffer, - size_t size ); - -H5_HLDLL herr_t H5LTset_attribute_long_long( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const long long *buffer, - size_t size ); - -H5_HLDLL herr_t H5LTset_attribute_ulong( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const unsigned long *buffer, - size_t size ); - -H5_HLDLL herr_t H5LTset_attribute_float( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const float *buffer, - size_t size ); - -H5_HLDLL herr_t H5LTset_attribute_double( hid_t loc_id, - const char *obj_name, - const char *attr_name, - const double *buffer, - size_t size ); +H5_HLDLL herr_t H5LTset_attribute_double(hid_t loc_id, const char *obj_name, const char *attr_name, + const double *buffer, size_t size); /*------------------------------------------------------------------------- * @@ -238,72 +152,41 @@ H5_HLDLL herr_t H5LTset_attribute_double( hid_t loc_id, *------------------------------------------------------------------------- */ -H5_HLDLL herr_t H5LTget_attribute( hid_t loc_id, - const char *obj_name, - const char *attr_name, - hid_t mem_type_id, - void *data ); - -H5_HLDLL herr_t H5LTget_attribute_string( hid_t loc_id, - const char *obj_name, - const char *attr_name, - char *data ); - -H5_HLDLL herr_t H5LTget_attribute_char( hid_t loc_id, - const char *obj_name, - const char *attr_name, - char *data ); - -H5_HLDLL herr_t H5LTget_attribute_uchar( hid_t loc_id, - const char *obj_name, - const char *attr_name, - unsigned char *data ); - -H5_HLDLL herr_t H5LTget_attribute_short( hid_t loc_id, - const char *obj_name, - const char *attr_name, - short *data ); - -H5_HLDLL herr_t H5LTget_attribute_ushort( hid_t loc_id, - const char *obj_name, - const char *attr_name, - unsigned short *data ); - -H5_HLDLL herr_t H5LTget_attribute_int( hid_t loc_id, - const char *obj_name, - const char *attr_name, - int *data ); - -H5_HLDLL herr_t H5LTget_attribute_uint( hid_t loc_id, - const char *obj_name, - const char *attr_name, - unsigned int *data ); - -H5_HLDLL herr_t H5LTget_attribute_long( hid_t loc_id, - const char *obj_name, - const char *attr_name, - long *data ); - -H5_HLDLL herr_t H5LTget_attribute_long_long( hid_t loc_id, - const char *obj_name, - const char *attr_name, - long long *data ); - -H5_HLDLL herr_t H5LTget_attribute_ulong( hid_t loc_id, - const char *obj_name, - const char *attr_name, - unsigned long *data ); - -H5_HLDLL herr_t H5LTget_attribute_float( hid_t loc_id, - const char *obj_name, - const char *attr_name, - float *data ); - -H5_HLDLL herr_t H5LTget_attribute_double( hid_t loc_id, - const char *obj_name, - const char *attr_name, - double *data ); +H5_HLDLL herr_t H5LTget_attribute(hid_t loc_id, const char *obj_name, const char *attr_name, + hid_t mem_type_id, void *data); +H5_HLDLL herr_t H5LTget_attribute_string(hid_t loc_id, const char *obj_name, const char *attr_name, + char *data); + +H5_HLDLL herr_t H5LTget_attribute_char(hid_t loc_id, const char *obj_name, const char *attr_name, char *data); + +H5_HLDLL herr_t H5LTget_attribute_uchar(hid_t loc_id, const char *obj_name, const char *attr_name, + unsigned char *data); + +H5_HLDLL herr_t H5LTget_attribute_short(hid_t loc_id, const char *obj_name, const char *attr_name, + short *data); + +H5_HLDLL herr_t H5LTget_attribute_ushort(hid_t loc_id, const char *obj_name, const char *attr_name, + unsigned short *data); + +H5_HLDLL herr_t H5LTget_attribute_int(hid_t loc_id, const char *obj_name, const char *attr_name, int *data); + +H5_HLDLL herr_t H5LTget_attribute_uint(hid_t loc_id, const char *obj_name, const char *attr_name, + unsigned int *data); + +H5_HLDLL herr_t H5LTget_attribute_long(hid_t loc_id, const char *obj_name, const char *attr_name, long *data); + +H5_HLDLL herr_t H5LTget_attribute_long_long(hid_t loc_id, const char *obj_name, const char *attr_name, + long long *data); + +H5_HLDLL herr_t H5LTget_attribute_ulong(hid_t loc_id, const char *obj_name, const char *attr_name, + unsigned long *data); + +H5_HLDLL herr_t H5LTget_attribute_float(hid_t loc_id, const char *obj_name, const char *attr_name, + float *data); + +H5_HLDLL herr_t H5LTget_attribute_double(hid_t loc_id, const char *obj_name, const char *attr_name, + double *data); /*------------------------------------------------------------------------- * @@ -312,22 +195,10 @@ H5_HLDLL herr_t H5LTget_attribute_double( hid_t loc_id, *------------------------------------------------------------------------- */ +H5_HLDLL herr_t H5LTget_attribute_ndims(hid_t loc_id, const char *obj_name, const char *attr_name, int *rank); -H5_HLDLL herr_t H5LTget_attribute_ndims( hid_t loc_id, - const char *obj_name, - const char *attr_name, - int *rank ); - -H5_HLDLL herr_t H5LTget_attribute_info( hid_t loc_id, - const char *obj_name, - const char *attr_name, - hsize_t *dims, - H5T_class_t *type_class, - size_t *type_size ); - - - - +H5_HLDLL herr_t H5LTget_attribute_info(hid_t loc_id, const char *obj_name, const char *attr_name, + hsize_t *dims, H5T_class_t *type_class, size_t *type_size); /*------------------------------------------------------------------------- * @@ -336,10 +207,9 @@ H5_HLDLL herr_t H5LTget_attribute_info( hid_t loc_id, *------------------------------------------------------------------------- */ -H5_HLDLL hid_t H5LTtext_to_dtype(const char *text, H5LT_lang_t lang_type); +H5_HLDLL hid_t H5LTtext_to_dtype(const char *text, H5LT_lang_t lang_type); H5_HLDLL herr_t H5LTdtype_to_text(hid_t dtype, char *str, H5LT_lang_t lang_type, size_t *len); - /*------------------------------------------------------------------------- * * Utility functions @@ -347,7 +217,7 @@ H5_HLDLL herr_t H5LTdtype_to_text(hid_t dtype, char *str, H5LT_lang_t lang_type, *------------------------------------------------------------------------- */ -H5_HLDLL herr_t H5LTfind_attribute( hid_t loc_id, const char *name ); +H5_HLDLL herr_t H5LTfind_attribute(hid_t loc_id, const char *name); H5_HLDLL htri_t H5LTpath_valid(hid_t loc_id, const char *path, hbool_t check_object_valid); @@ -365,4 +235,3 @@ H5_HLDLL hid_t H5LTopen_file_image(void *buf_ptr, size_t buf_size, unsigned flag #endif #endif - diff --git a/hl/src/H5PT.c b/hl/src/H5PT.c index 07d8bfb..058caff 100644 --- a/hl/src/H5PT.c +++ b/hl/src/H5PT.c @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -18,22 +18,21 @@ /* Packet Table private data */ -typedef struct -{ - hid_t dset_id; /* The ID of the dataset containing this table */ - hid_t type_id; /* The ID of the packet table's native datatype */ - hsize_t current_index; /* The index of the packet that get_next_packet will read next */ - hsize_t size; /* The number of packets currently contained in this table */ +typedef struct { + hid_t dset_id; /* The ID of the dataset containing this table */ + hid_t type_id; /* The ID of the packet table's native datatype */ + hsize_t current_index; /* The index of the packet that get_next_packet will read next */ + hsize_t size; /* The number of packets currently contained in this table */ } htbl_t; -static hsize_t H5PT_ptable_count = 0; +static hsize_t H5PT_ptable_count = 0; static H5I_type_t H5PT_ptable_id_type = H5I_UNINIT; #define H5PT_HASH_TABLE_SIZE 64 /* Packet Table private functions */ static herr_t H5PT_free_id(void *id); -static herr_t H5PT_close( htbl_t* table ); +static herr_t H5PT_close(htbl_t *table); static herr_t H5PT_create_index(htbl_t *table_id); static herr_t H5PT_set_index(htbl_t *table_id, hsize_t pt_index); static herr_t H5PT_get_index(htbl_t *table_id, hsize_t *pt_index); @@ -71,109 +70,105 @@ static herr_t H5PT_get_index(htbl_t *table_id, hsize_t *pt_index); * *------------------------------------------------------------------------- */ -hid_t H5PTcreate(hid_t loc_id, - const char *dset_name, - hid_t dtype_id, - hsize_t chunk_size, - hid_t plist_id) +hid_t +H5PTcreate(hid_t loc_id, const char *dset_name, hid_t dtype_id, hsize_t chunk_size, hid_t plist_id) { - htbl_t * table = NULL; - hid_t dset_id = H5I_INVALID_HID; - hid_t space_id = H5I_INVALID_HID; - hid_t plistcopy_id = H5I_INVALID_HID; - hsize_t dims[1]; - hsize_t dims_chunk[1]; - hsize_t maxdims[1]; - hid_t ret_value = H5I_INVALID_HID; - - /* check the arguments */ - if (dset_name == NULL) { - goto error; - } - - /* Register the packet table ID type if this is the first table created */ - if(H5PT_ptable_id_type < 0) - if((H5PT_ptable_id_type = H5Iregister_type((size_t)H5PT_HASH_TABLE_SIZE, 0, (H5I_free_t)H5PT_free_id)) < 0) - goto error; - - /* Get memory for the table identifier */ - table = (htbl_t *)HDmalloc(sizeof(htbl_t)); - if ( table == NULL ) { - goto error; - } - table->dset_id = H5I_INVALID_HID; - table->type_id = H5I_INVALID_HID; - - /* Create a simple data space with unlimited size */ - dims[0] = 0; - dims_chunk[0] = chunk_size; - maxdims[0] = H5S_UNLIMITED; - if((space_id = H5Screate_simple(1, dims, maxdims)) < 0) - goto error; - - /* Modify dataset creation properties to enable chunking */ - if (plist_id == H5P_DEFAULT) { - plistcopy_id = H5Pcreate(H5P_DATASET_CREATE); - } - else { - plistcopy_id = H5Pcopy(plist_id); - } - if (chunk_size > 0) - { - if(H5Pset_chunk(plistcopy_id, 1, dims_chunk) < 0) - goto error; - } - - /* Create the dataset. */ - if((dset_id = H5Dcreate2(loc_id, dset_name, dtype_id, space_id, H5P_DEFAULT, plistcopy_id, H5P_DEFAULT)) < 0) - goto error; - - /* Create the table identifier */ - table->dset_id = dset_id; - - /* Terminate access to the data space. */ - if(H5Sclose(space_id) < 0) - goto error; - - /* End access to the property list */ - if(H5Pclose(plistcopy_id) < 0) - goto error; - - /* Make a copy of caller's datatype and save it in the table structure. - It will be closed when the table is closed */ - if((table->type_id = H5Tcopy(dtype_id)) < 0) - goto error; - - H5PT_create_index(table); - table->size = 0; - - /* Get an ID for this table */ - ret_value = H5Iregister(H5PT_ptable_id_type, table); - if(ret_value != H5I_INVALID_HID) - H5PT_ptable_count++; - else - H5PT_close(table); - - return ret_value; + htbl_t *table = NULL; + hid_t dset_id = H5I_INVALID_HID; + hid_t space_id = H5I_INVALID_HID; + hid_t plistcopy_id = H5I_INVALID_HID; + hsize_t dims[1]; + hsize_t dims_chunk[1]; + hsize_t maxdims[1]; + hid_t ret_value = H5I_INVALID_HID; + + /* check the arguments */ + if (dset_name == NULL) { + goto error; + } + + /* Register the packet table ID type if this is the first table created */ + if (H5PT_ptable_id_type < 0) + if ((H5PT_ptable_id_type = + H5Iregister_type((size_t)H5PT_HASH_TABLE_SIZE, 0, (H5I_free_t)H5PT_free_id)) < 0) + goto error; + + /* Get memory for the table identifier */ + table = (htbl_t *)HDmalloc(sizeof(htbl_t)); + if (table == NULL) { + goto error; + } + table->dset_id = H5I_INVALID_HID; + table->type_id = H5I_INVALID_HID; + + /* Create a simple data space with unlimited size */ + dims[0] = 0; + dims_chunk[0] = chunk_size; + maxdims[0] = H5S_UNLIMITED; + if ((space_id = H5Screate_simple(1, dims, maxdims)) < 0) + goto error; + + /* Modify dataset creation properties to enable chunking */ + if (plist_id == H5P_DEFAULT) { + plistcopy_id = H5Pcreate(H5P_DATASET_CREATE); + } + else { + plistcopy_id = H5Pcopy(plist_id); + } + if (chunk_size > 0) { + if (H5Pset_chunk(plistcopy_id, 1, dims_chunk) < 0) + goto error; + } + + /* Create the dataset. */ + if ((dset_id = + H5Dcreate2(loc_id, dset_name, dtype_id, space_id, H5P_DEFAULT, plistcopy_id, H5P_DEFAULT)) < 0) + goto error; + + /* Create the table identifier */ + table->dset_id = dset_id; + + /* Terminate access to the data space. */ + if (H5Sclose(space_id) < 0) + goto error; + + /* End access to the property list */ + if (H5Pclose(plistcopy_id) < 0) + goto error; + + /* Make a copy of caller's datatype and save it in the table structure. + It will be closed when the table is closed */ + if ((table->type_id = H5Tcopy(dtype_id)) < 0) + goto error; + + H5PT_create_index(table); + table->size = 0; + + /* Get an ID for this table */ + ret_value = H5Iregister(H5PT_ptable_id_type, table); + if (ret_value != H5I_INVALID_HID) + H5PT_ptable_count++; + else + H5PT_close(table); + + return ret_value; error: if (space_id != H5I_INVALID_HID) - H5Sclose(space_id); + H5Sclose(space_id); if (plistcopy_id != H5I_INVALID_HID) - H5Pclose(plistcopy_id); + H5Pclose(plistcopy_id); if (dset_id != H5I_INVALID_HID) - H5Dclose(dset_id); - if (table) - { + H5Dclose(dset_id); + if (table) { if (table->type_id != H5I_INVALID_HID) - H5Tclose(table->type_id); - HDfree(table); + H5Tclose(table->type_id); + HDfree(table); } return ret_value; } /* H5PTcreate */ - /*------------------------------------------------------------------------- * Function: H5PTcreate_fl * @@ -196,98 +191,95 @@ error: *------------------------------------------------------------------------- */ -hid_t H5PTcreate_fl ( hid_t loc_id, - const char *dset_name, - hid_t dtype_id, - hsize_t chunk_size, - int compression ) +hid_t +H5PTcreate_fl(hid_t loc_id, const char *dset_name, hid_t dtype_id, hsize_t chunk_size, int compression) { - htbl_t * table = NULL; - hid_t dset_id = H5I_INVALID_HID; - hid_t space_id = H5I_INVALID_HID; - hid_t plist_id = H5I_INVALID_HID; - hsize_t dims[1]; - hsize_t dims_chunk[1]; - hsize_t maxdims[1]; - hid_t ret_value = H5I_INVALID_HID; - - /* check the arguments */ - if (dset_name == NULL) { - goto error; - } - - /* Register the packet table ID type if this is the first table created */ - if(H5PT_ptable_id_type < 0) - if((H5PT_ptable_id_type = H5Iregister_type((size_t)H5PT_HASH_TABLE_SIZE, 0, (H5I_free_t)H5PT_free_id)) < 0) - goto error; - - /* Get memory for the table identifier */ - table = (htbl_t *)HDmalloc(sizeof(htbl_t)); - if ( table == NULL ) { - goto error; - } - table->dset_id = H5I_INVALID_HID; - table->type_id = H5I_INVALID_HID; - - /* Create a simple data space with unlimited size */ - dims[0] = 0; - dims_chunk[0] = chunk_size; - maxdims[0] = H5S_UNLIMITED; - if((space_id = H5Screate_simple(1, dims, maxdims)) < 0) - goto error; - - /* Modify dataset creation properties to enable chunking */ - plist_id = H5Pcreate(H5P_DATASET_CREATE); - if(H5Pset_chunk(plist_id, 1, dims_chunk) < 0) - goto error; - if(compression >= 0 && compression <= 9) - if(H5Pset_deflate(plist_id, (unsigned)compression) < 0) + htbl_t *table = NULL; + hid_t dset_id = H5I_INVALID_HID; + hid_t space_id = H5I_INVALID_HID; + hid_t plist_id = H5I_INVALID_HID; + hsize_t dims[1]; + hsize_t dims_chunk[1]; + hsize_t maxdims[1]; + hid_t ret_value = H5I_INVALID_HID; + + /* check the arguments */ + if (dset_name == NULL) { goto error; + } - /* Create the dataset. */ - if((dset_id = H5Dcreate2(loc_id, dset_name, dtype_id, space_id, H5P_DEFAULT, plist_id, H5P_DEFAULT)) < 0) - goto error; + /* Register the packet table ID type if this is the first table created */ + if (H5PT_ptable_id_type < 0) + if ((H5PT_ptable_id_type = + H5Iregister_type((size_t)H5PT_HASH_TABLE_SIZE, 0, (H5I_free_t)H5PT_free_id)) < 0) + goto error; - /* Create the table identifier */ - table->dset_id = dset_id; + /* Get memory for the table identifier */ + table = (htbl_t *)HDmalloc(sizeof(htbl_t)); + if (table == NULL) { + goto error; + } + table->dset_id = H5I_INVALID_HID; + table->type_id = H5I_INVALID_HID; + + /* Create a simple data space with unlimited size */ + dims[0] = 0; + dims_chunk[0] = chunk_size; + maxdims[0] = H5S_UNLIMITED; + if ((space_id = H5Screate_simple(1, dims, maxdims)) < 0) + goto error; - /* Terminate access to the data space. */ - if(H5Sclose(space_id) < 0) - goto error; + /* Modify dataset creation properties to enable chunking */ + plist_id = H5Pcreate(H5P_DATASET_CREATE); + if (H5Pset_chunk(plist_id, 1, dims_chunk) < 0) + goto error; + if (compression >= 0 && compression <= 9) + if (H5Pset_deflate(plist_id, (unsigned)compression) < 0) + goto error; - /* End access to the property list */ - if(H5Pclose(plist_id) < 0) - goto error; + /* Create the dataset. */ + if ((dset_id = H5Dcreate2(loc_id, dset_name, dtype_id, space_id, H5P_DEFAULT, plist_id, H5P_DEFAULT)) < 0) + goto error; - /* Make a copy of caller's datatype and save it in the table structure. - It will be closed when the table is closed */ - if((table->type_id = H5Tcopy(dtype_id)) < 0) - goto error; + /* Create the table identifier */ + table->dset_id = dset_id; - H5PT_create_index(table); - table->size = 0; + /* Terminate access to the data space. */ + if (H5Sclose(space_id) < 0) + goto error; + + /* End access to the property list */ + if (H5Pclose(plist_id) < 0) + goto error; + + /* Make a copy of caller's datatype and save it in the table structure. + It will be closed when the table is closed */ + if ((table->type_id = H5Tcopy(dtype_id)) < 0) + goto error; + + H5PT_create_index(table); + table->size = 0; - /* Get an ID for this table */ - ret_value = H5Iregister(H5PT_ptable_id_type, table); - if(ret_value != H5I_INVALID_HID) - H5PT_ptable_count++; - else - H5PT_close(table); + /* Get an ID for this table */ + ret_value = H5Iregister(H5PT_ptable_id_type, table); + if (ret_value != H5I_INVALID_HID) + H5PT_ptable_count++; + else + H5PT_close(table); - return ret_value; + return ret_value; error: if (space_id != H5I_INVALID_HID) - H5Sclose(space_id); + H5Sclose(space_id); if (plist_id != H5I_INVALID_HID) - H5Pclose(plist_id); + H5Pclose(plist_id); if (dset_id != H5I_INVALID_HID) - H5Dclose(dset_id); - if (table) - { + H5Dclose(dset_id); + if (table) { if (table->type_id != H5I_INVALID_HID) - H5Tclose(table->type_id); - HDfree(table); + H5Tclose(table->type_id); + HDfree(table); } return ret_value; @@ -317,87 +309,87 @@ error: * *------------------------------------------------------------------------- */ -hid_t H5PTopen( hid_t loc_id, - const char *dset_name ) +hid_t +H5PTopen(hid_t loc_id, const char *dset_name) { - hid_t type_id=H5I_INVALID_HID; - hid_t space_id=H5I_INVALID_HID; - htbl_t * table = NULL; - hsize_t dims[1]; - hid_t ret_value = H5I_INVALID_HID; - - /* check the arguments */ - if (dset_name == NULL) { - goto error; - } - - /* Register the packet table ID type if this is the first table created */ - if( H5PT_ptable_id_type < 0) - if((H5PT_ptable_id_type = H5Iregister_type((size_t)H5PT_HASH_TABLE_SIZE, 0, (H5I_free_t)H5PT_free_id)) < 0) - goto error; - - table = (htbl_t *)HDmalloc(sizeof(htbl_t)); - if ( table == NULL ) { - goto error; - } - table->dset_id = H5I_INVALID_HID; - table->type_id = H5I_INVALID_HID; - - /* Open the dataset */ - if((table->dset_id = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) - goto error; - - /* Get the dataset's disk datatype */ - if((type_id = H5Dget_type(table->dset_id)) < 0) - goto error; - - /* Make a copy of the datatype obtained and save it in the table structure. - It will be closed when the table is closed */ - if((table->type_id = H5Tcopy(type_id)) < 0) - goto error; - - /* Close the disk datatype */ - if(H5Tclose(type_id) < 0) - goto error; - type_id = H5I_INVALID_HID; - - /* Initialize the current record pointer */ - if((H5PT_create_index(table)) < 0) - goto error; - - /* Get number of records in table */ - if((space_id=H5Dget_space(table->dset_id)) < 0) - goto error; - if(H5Sget_simple_extent_dims(space_id, dims, NULL) < 0) - goto error; - if(H5Sclose(space_id) < 0) - goto error; - space_id = H5I_INVALID_HID; - - table->size = dims[0]; - - /* Get an ID for this table */ - ret_value = H5Iregister(H5PT_ptable_id_type, table); - - if(ret_value != H5I_INVALID_HID) - H5PT_ptable_count++; - else - H5PT_close(table); - - return ret_value; + hid_t type_id = H5I_INVALID_HID; + hid_t space_id = H5I_INVALID_HID; + htbl_t *table = NULL; + hsize_t dims[1]; + hid_t ret_value = H5I_INVALID_HID; + + /* check the arguments */ + if (dset_name == NULL) { + goto error; + } + + /* Register the packet table ID type if this is the first table created */ + if (H5PT_ptable_id_type < 0) + if ((H5PT_ptable_id_type = + H5Iregister_type((size_t)H5PT_HASH_TABLE_SIZE, 0, (H5I_free_t)H5PT_free_id)) < 0) + goto error; + + table = (htbl_t *)HDmalloc(sizeof(htbl_t)); + if (table == NULL) { + goto error; + } + table->dset_id = H5I_INVALID_HID; + table->type_id = H5I_INVALID_HID; + + /* Open the dataset */ + if ((table->dset_id = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + goto error; + + /* Get the dataset's disk datatype */ + if ((type_id = H5Dget_type(table->dset_id)) < 0) + goto error; + + /* Make a copy of the datatype obtained and save it in the table structure. + It will be closed when the table is closed */ + if ((table->type_id = H5Tcopy(type_id)) < 0) + goto error; + + /* Close the disk datatype */ + if (H5Tclose(type_id) < 0) + goto error; + type_id = H5I_INVALID_HID; + + /* Initialize the current record pointer */ + if ((H5PT_create_index(table)) < 0) + goto error; + + /* Get number of records in table */ + if ((space_id = H5Dget_space(table->dset_id)) < 0) + goto error; + if (H5Sget_simple_extent_dims(space_id, dims, NULL) < 0) + goto error; + if (H5Sclose(space_id) < 0) + goto error; + space_id = H5I_INVALID_HID; + + table->size = dims[0]; + + /* Get an ID for this table */ + ret_value = H5Iregister(H5PT_ptable_id_type, table); + + if (ret_value != H5I_INVALID_HID) + H5PT_ptable_count++; + else + H5PT_close(table); + + return ret_value; error: if (type_id != H5I_INVALID_HID) - H5Dclose(type_id); + H5Dclose(type_id); if (space_id != H5I_INVALID_HID) - H5Sclose(space_id); - if(table) - { + H5Sclose(space_id); + if (table) { if (table->type_id != H5I_INVALID_HID) - H5Tclose(table->type_id); - if (table->dset_id != H5I_INVALID_HID) - H5Dclose(table->dset_id); - HDfree(table); + H5Tclose(table->type_id); + if (table->dset_id != H5I_INVALID_HID) + H5Dclose(table->dset_id); + HDfree(table); } return ret_value; @@ -438,33 +430,32 @@ H5PT_free_id(void *id) *------------------------------------------------------------------------- */ static herr_t -H5PT_close( htbl_t* table) +H5PT_close(htbl_t *table) { - if(table == NULL) - goto error; + if (table == NULL) + goto error; - /* Close the dataset */ - if(H5Dclose(table->dset_id) < 0) - goto error; + /* Close the dataset */ + if (H5Dclose(table->dset_id) < 0) + goto error; - /* Close the memory datatype */ - if(H5Tclose(table->type_id) < 0) - goto error; + /* Close the memory datatype */ + if (H5Tclose(table->type_id) < 0) + goto error; - HDfree(table); + HDfree(table); - return SUCCEED; + return SUCCEED; error: - if(table) - { - H5E_BEGIN_TRY - H5Dclose(table->dset_id); - H5Tclose(table->type_id); - H5E_END_TRY - HDfree(table); - } - return FAIL; + if (table) { + H5E_BEGIN_TRY + H5Dclose(table->dset_id); + H5Tclose(table->type_id); + H5E_END_TRY + HDfree(table); + } + return FAIL; } /*------------------------------------------------------------------------- @@ -486,36 +477,35 @@ error: * *------------------------------------------------------------------------- */ -herr_t H5PTclose( hid_t table_id ) +herr_t +H5PTclose(hid_t table_id) { - htbl_t * table; + htbl_t *table; - /* Remove the ID from the library */ - if((table = (htbl_t *)H5Iremove_verify(table_id, H5PT_ptable_id_type)) ==NULL) - goto error; + /* Remove the ID from the library */ + if ((table = (htbl_t *)H5Iremove_verify(table_id, H5PT_ptable_id_type)) == NULL) + goto error; - /* If the library found the table, remove it */ - if( H5PT_close(table) < 0) - goto error; + /* If the library found the table, remove it */ + if (H5PT_close(table) < 0) + goto error; - /* One less packet table open */ - H5PT_ptable_count--; + /* One less packet table open */ + H5PT_ptable_count--; - /* Remove the packet table type ID if no more packet */ - /* tables are open */ - if(H5PT_ptable_count == 0) - { - H5Idestroy_type(H5PT_ptable_id_type); - H5PT_ptable_id_type = H5I_UNINIT; - } + /* Remove the packet table type ID if no more packet */ + /* tables are open */ + if (H5PT_ptable_count == 0) { + H5Idestroy_type(H5PT_ptable_id_type); + H5PT_ptable_id_type = H5I_UNINIT; + } - return SUCCEED; + return SUCCEED; error: - return FAIL; + return FAIL; } - /*------------------------------------------------------------------------- * * Write functions @@ -541,30 +531,28 @@ error: * *------------------------------------------------------------------------- */ -herr_t H5PTappend( hid_t table_id, - size_t nrecords, - const void * data ) +herr_t +H5PTappend(hid_t table_id, size_t nrecords, const void *data) { - htbl_t * table; + htbl_t *table; - /* Find the table struct from its ID */ - if((table = (htbl_t *) H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) - goto error; + /* Find the table struct from its ID */ + if ((table = (htbl_t *)H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) + goto error; - /* If we are asked to write 0 records, just do nothing */ - if(nrecords == 0) - return SUCCEED; + /* If we are asked to write 0 records, just do nothing */ + if (nrecords == 0) + return SUCCEED; - if((H5TB_common_append_records(table->dset_id, table->type_id, - nrecords, table->size, data)) < 0) - goto error; + if ((H5TB_common_append_records(table->dset_id, table->type_id, nrecords, table->size, data)) < 0) + goto error; - /* Update table size */ - table->size += nrecords; - return SUCCEED; + /* Update table size */ + table->size += nrecords; + return SUCCEED; error: - return FAIL; + return FAIL; } /*------------------------------------------------------------------------- @@ -574,7 +562,6 @@ error: *------------------------------------------------------------------------- */ - /*------------------------------------------------------------------------- * Function: H5PTget_next * @@ -595,30 +582,29 @@ error: * *------------------------------------------------------------------------- */ -herr_t H5PTget_next( hid_t table_id, - size_t nrecords, - void * data) +herr_t +H5PTget_next(hid_t table_id, size_t nrecords, void *data) { - htbl_t * table; + htbl_t *table; - /* Find the table struct from its ID */ - if((table = (htbl_t *) H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) - goto error; + /* Find the table struct from its ID */ + if ((table = (htbl_t *)H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) + goto error; - /* If nrecords == 0, do nothing */ - if(nrecords == 0) - return SUCCEED; + /* If nrecords == 0, do nothing */ + if (nrecords == 0) + return SUCCEED; - if((H5TB_common_read_records(table->dset_id, table->type_id, - table->current_index, nrecords, table->size, data)) < 0) - goto error; + if ((H5TB_common_read_records(table->dset_id, table->type_id, table->current_index, nrecords, table->size, + data)) < 0) + goto error; - /* Update the current index */ - table->current_index += nrecords; - return SUCCEED; + /* Update the current index */ + table->current_index += nrecords; + return SUCCEED; error: - return FAIL; + return FAIL; } /*------------------------------------------------------------------------- @@ -640,30 +626,27 @@ error: * *------------------------------------------------------------------------- */ -herr_t H5PTread_packets( hid_t table_id, - hsize_t start, - size_t nrecords, - void *data) +herr_t +H5PTread_packets(hid_t table_id, hsize_t start, size_t nrecords, void *data) { - htbl_t * table; + htbl_t *table; - /* find the table struct from its ID */ - table = (htbl_t *) H5Iobject_verify(table_id, H5PT_ptable_id_type); - if(table == NULL) - goto error; + /* find the table struct from its ID */ + table = (htbl_t *)H5Iobject_verify(table_id, H5PT_ptable_id_type); + if (table == NULL) + goto error; - /* If nrecords == 0, do nothing */ - if(nrecords == 0) - return SUCCEED; + /* If nrecords == 0, do nothing */ + if (nrecords == 0) + return SUCCEED; - if( H5TB_common_read_records(table->dset_id, table->type_id, - start, nrecords, table->size, data) < 0) - goto error; + if (H5TB_common_read_records(table->dset_id, table->type_id, start, nrecords, table->size, data) < 0) + goto error; - return SUCCEED; + return SUCCEED; error: - return FAIL; + return FAIL; } /*------------------------------------------------------------------------- @@ -694,40 +677,36 @@ error: static herr_t H5PT_create_index(htbl_t *table) { - if( table != NULL) - { - table->current_index = 0; - return SUCCEED; - } - return FAIL; + if (table != NULL) { + table->current_index = 0; + return SUCCEED; + } + return FAIL; } static herr_t H5PT_set_index(htbl_t *table, hsize_t pt_index) { - /* Ensure index is valid */ - if( table != NULL ) - { - if( pt_index < table->size ) - { - table->current_index = pt_index; - return SUCCEED; + /* Ensure index is valid */ + if (table != NULL) { + if (pt_index < table->size) { + table->current_index = pt_index; + return SUCCEED; + } } - } - return FAIL; + return FAIL; } static herr_t H5PT_get_index(htbl_t *table, hsize_t *pt_index) { - /* Ensure index is valid */ - if( table != NULL ) - { - if(pt_index) - *pt_index = table->current_index; - return SUCCEED; - } - return FAIL; + /* Ensure index is valid */ + if (table != NULL) { + if (pt_index) + *pt_index = table->current_index; + return SUCCEED; + } + return FAIL; } /*------------------------------------------------------------------------- @@ -748,37 +727,40 @@ H5PT_get_index(htbl_t *table, hsize_t *pt_index) * *------------------------------------------------------------------------- */ -herr_t H5PTcreate_index(hid_t table_id) +herr_t +H5PTcreate_index(hid_t table_id) { - htbl_t * table; + htbl_t *table; - /* find the table struct from its ID */ - if((table = (htbl_t *) (htbl_t *) H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) - return FAIL; + /* find the table struct from its ID */ + if ((table = (htbl_t *)(htbl_t *)H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) + return FAIL; - return H5PT_create_index(table); + return H5PT_create_index(table); } -herr_t H5PTset_index(hid_t table_id, hsize_t pt_index) +herr_t +H5PTset_index(hid_t table_id, hsize_t pt_index) { - htbl_t * table; + htbl_t *table; - /* find the table struct from its ID */ - if((table = (htbl_t *) H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) - return FAIL; + /* find the table struct from its ID */ + if ((table = (htbl_t *)H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) + return FAIL; - return H5PT_set_index(table, pt_index); + return H5PT_set_index(table, pt_index); } -herr_t H5PTget_index(hid_t table_id, hsize_t *pt_index) +herr_t +H5PTget_index(hid_t table_id, hsize_t *pt_index) { - htbl_t * table; + htbl_t *table; - /* find the table struct from its ID */ - if((table = (htbl_t *) H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) - return FAIL; + /* find the table struct from its ID */ + if ((table = (htbl_t *)H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) + return FAIL; - return H5PT_get_index(table, pt_index); + return H5PT_get_index(table, pt_index); } /*------------------------------------------------------------------------- @@ -807,24 +789,24 @@ herr_t H5PTget_index(hid_t table_id, hsize_t *pt_index) * *------------------------------------------------------------------------- */ -herr_t H5PTget_num_packets( hid_t table_id, hsize_t *nrecords) +herr_t +H5PTget_num_packets(hid_t table_id, hsize_t *nrecords) { - htbl_t * table; + htbl_t *table; - /* find the table struct from its ID */ - if((table = (htbl_t *) H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) - goto error; + /* find the table struct from its ID */ + if ((table = (htbl_t *)H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) + goto error; - if(nrecords) - *nrecords = table->size; + if (nrecords) + *nrecords = table->size; - return SUCCEED; + return SUCCEED; error: - return FAIL; + return FAIL; } - /*------------------------------------------------------------------------- * Function: H5PTis_valid * @@ -844,13 +826,14 @@ error: * *------------------------------------------------------------------------- */ -herr_t H5PTis_valid(hid_t table_id) +herr_t +H5PTis_valid(hid_t table_id) { - /* find the table struct from its ID */ - if(H5Iobject_verify(table_id, H5PT_ptable_id_type) ==NULL) - return FAIL; + /* find the table struct from its ID */ + if (H5Iobject_verify(table_id, H5PT_ptable_id_type) == NULL) + return FAIL; - return SUCCEED; + return SUCCEED; } /*------------------------------------------------------------------------- @@ -873,25 +856,26 @@ herr_t H5PTis_valid(hid_t table_id) * *------------------------------------------------------------------------- */ -herr_t H5PTis_varlen(hid_t table_id) +herr_t +H5PTis_varlen(hid_t table_id) { - H5T_class_t type; - htbl_t * table; + H5T_class_t type; + htbl_t * table; - /* find the table struct from its ID */ - if((table = (htbl_t *) H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) - goto error; + /* find the table struct from its ID */ + if ((table = (htbl_t *)H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) + goto error; - if((type = H5Tget_class( table->type_id )) == H5T_NO_CLASS) - goto error; + if ((type = H5Tget_class(table->type_id)) == H5T_NO_CLASS) + goto error; - if( type == H5T_VLEN ) - return 1; - else - return 0; + if (type == H5T_VLEN) + return 1; + else + return 0; error: - return FAIL; + return FAIL; } /*------------------------------------------------------------------------- @@ -923,38 +907,37 @@ error: *------------------------------------------------------------------------- */ -herr_t H5PTfree_vlen_buff( hid_t table_id, - size_t _bufflen, - void * buff ) +herr_t +H5PTfree_vlen_buff(hid_t table_id, size_t _bufflen, void *buff) { - hid_t space_id = H5I_INVALID_HID; - htbl_t * table; - hsize_t bufflen = _bufflen; - herr_t ret_value; + hid_t space_id = H5I_INVALID_HID; + htbl_t *table; + hsize_t bufflen = _bufflen; + herr_t ret_value; - /* find the table struct from its ID */ - if((table = (htbl_t *) H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) - goto error; + /* find the table struct from its ID */ + if ((table = (htbl_t *)H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) + goto error; - if((space_id = H5Screate_simple(1, &bufflen, NULL)) < 0) - goto error; + if ((space_id = H5Screate_simple(1, &bufflen, NULL)) < 0) + goto error; - /* Free the memory. If this succeeds, ret_value should be 0. */ - if((ret_value = H5Dvlen_reclaim(table->type_id, space_id, H5P_DEFAULT, buff)) < 0) - goto error; + /* Free the memory. If this succeeds, ret_value should be 0. */ + if ((ret_value = H5Dvlen_reclaim(table->type_id, space_id, H5P_DEFAULT, buff)) < 0) + goto error; - /* If the dataspace cannot be closed, return -2 to indicate that memory */ - /* was freed successfully but an error still occurred. */ - if(H5Sclose(space_id) < 0) - return -2; + /* If the dataspace cannot be closed, return -2 to indicate that memory */ + /* was freed successfully but an error still occurred. */ + if (H5Sclose(space_id) < 0) + return -2; - return ret_value; + return ret_value; error: - H5E_BEGIN_TRY + H5E_BEGIN_TRY H5Sclose(space_id); - H5E_END_TRY - return FAIL; + H5E_END_TRY + return FAIL; } /* H5PTfree_vlen_buff */ /*------------------------------------------------------------------------- @@ -981,20 +964,21 @@ error: * *------------------------------------------------------------------------- */ -hid_t H5PTget_dataset(hid_t table_id) +hid_t +H5PTget_dataset(hid_t table_id) { - htbl_t * table; - hid_t ret_value = H5I_INVALID_HID; + htbl_t *table; + hid_t ret_value = H5I_INVALID_HID; - /* find the table struct from its ID */ - if((table = (htbl_t *) H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) - goto error; + /* find the table struct from its ID */ + if ((table = (htbl_t *)H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) + goto error; - ret_value = table->dset_id; + ret_value = table->dset_id; error: - return ret_value; + return ret_value; } /*------------------------------------------------------------------------- @@ -1015,18 +999,19 @@ error: * *------------------------------------------------------------------------- */ -hid_t H5PTget_type( hid_t table_id) +hid_t +H5PTget_type(hid_t table_id) { - htbl_t * table; - hid_t ret_value = H5I_INVALID_HID; + htbl_t *table; + hid_t ret_value = H5I_INVALID_HID; - /* find the table struct from its ID */ - if((table = (htbl_t *) H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) - goto error; + /* find the table struct from its ID */ + if ((table = (htbl_t *)H5Iobject_verify(table_id, H5PT_ptable_id_type)) == NULL) + goto error; - ret_value = table->type_id; + ret_value = table->type_id; error: - return ret_value; + return ret_value; } diff --git a/hl/src/H5PTprivate.h b/hl/src/H5PTprivate.h index eec9df7..7277dd2 100644 --- a/hl/src/H5PTprivate.h +++ b/hl/src/H5PTprivate.h @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -21,4 +21,3 @@ #include "H5PTpublic.h" #endif - diff --git a/hl/src/H5PTpublic.h b/hl/src/H5PTpublic.h index 8a12c8c..ec744f8 100644 --- a/hl/src/H5PTpublic.h +++ b/hl/src/H5PTpublic.h @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -14,7 +14,6 @@ #ifndef _H5PTpublic_H #define _H5PTpublic_H - #ifdef __cplusplus extern "C" { #endif @@ -25,17 +24,16 @@ extern "C" { */ /* NOTE: H5PTcreate is replacing H5PTcreate_fl for better name due to the removal of H5PTcreate_vl. H5PTcreate_fl may be retired in 1.8.19. */ -H5_HLDLL hid_t H5PTcreate(hid_t loc_id, const char *dset_name, - hid_t dtype_id, hsize_t chunk_size, hid_t plist_id); +H5_HLDLL hid_t H5PTcreate(hid_t loc_id, const char *dset_name, hid_t dtype_id, hsize_t chunk_size, + hid_t plist_id); H5_HLDLL hid_t H5PTopen(hid_t loc_id, const char *dset_name); H5_HLDLL herr_t H5PTclose(hid_t table_id); /* This function may be removed from the packet table in release 1.8.19. */ -H5_HLDLL hid_t H5PTcreate_fl(hid_t loc_id, const char *dset_name, - hid_t dtype_id, hsize_t chunk_size, int compression); - +H5_HLDLL hid_t H5PTcreate_fl(hid_t loc_id, const char *dset_name, hid_t dtype_id, hsize_t chunk_size, + int compression); /*------------------------------------------------------------------------- * Write functions @@ -47,10 +45,9 @@ H5_HLDLL herr_t H5PTappend(hid_t table_id, size_t nrecords, const void *data); * Read functions *------------------------------------------------------------------------- */ -H5_HLDLL herr_t H5PTget_next(hid_t table_id, size_t nrecords, void * data); +H5_HLDLL herr_t H5PTget_next(hid_t table_id, size_t nrecords, void *data); -H5_HLDLL herr_t H5PTread_packets(hid_t table_id, hsize_t start, - size_t nrecords, void *data); +H5_HLDLL herr_t H5PTread_packets(hid_t table_id, hsize_t start, size_t nrecords, void *data); /*------------------------------------------------------------------------- * Inquiry functions @@ -80,13 +77,11 @@ H5_HLDLL hid_t H5PTget_type(hid_t table_id); *------------------------------------------------------------------------- */ -H5_HLDLL herr_t H5PTcreate_index( hid_t table_id ); +H5_HLDLL herr_t H5PTcreate_index(hid_t table_id); -H5_HLDLL herr_t H5PTset_index( hid_t table_id, - hsize_t pt_index ); +H5_HLDLL herr_t H5PTset_index(hid_t table_id, hsize_t pt_index); -H5_HLDLL herr_t H5PTget_index( hid_t table_id, - hsize_t *pt_index ); +H5_HLDLL herr_t H5PTget_index(hid_t table_id, hsize_t *pt_index); /*------------------------------------------------------------------------- * @@ -95,13 +90,10 @@ H5_HLDLL herr_t H5PTget_index( hid_t table_id, *------------------------------------------------------------------------- */ -H5_HLDLL herr_t H5PTfree_vlen_buff( hid_t table_id, - size_t bufflen, - void * buff ); +H5_HLDLL herr_t H5PTfree_vlen_buff(hid_t table_id, size_t bufflen, void *buff); #ifdef __cplusplus } #endif #endif - diff --git a/hl/src/H5TB.c b/hl/src/H5TB.c index 682ba3f..7c6ba69 100644 --- a/hl/src/H5TB.c +++ b/hl/src/H5TB.c @@ -1,15 +1,15 @@ /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * -* Copyright by The HDF Group. * -* Copyright by the Board of Trustees of the University of Illinois. * -* All rights reserved. * -* * -* This file is part of HDF5. The full HDF5 copyright notice, including * -* terms governing use, modification, and redistribution, is contained in * + * Copyright by The HDF Group. * + * Copyright by the Board of Trustees of the University of Illinois. * + * All rights reserved. * + * * + * This file is part of HDF5. The full HDF5 copyright notice, including * + * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * -* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ + * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ #include <stdlib.h> #include <string.h> @@ -17,178 +17,160 @@ #include "H5LTprivate.h" #include "H5TBprivate.h" - /*------------------------------------------------------------------------- -* -* internal functions -* -*------------------------------------------------------------------------- -*/ - -static hbool_t H5TB_find_field(const char *field, - const char *field_list); - -static herr_t H5TB_attach_attributes(const char *table_title, - hid_t loc_id, - const char *dset_name, - hsize_t nfields, - hid_t tid); - -static hid_t H5TB_create_type(hid_t loc_id, - const char *dset_name, - size_t type_size, - const size_t *field_offset, - const size_t *field_sizes, - hid_t ftype_id); + * + * internal functions + * + *------------------------------------------------------------------------- + */ + +static hbool_t H5TB_find_field(const char *field, const char *field_list); + +static herr_t H5TB_attach_attributes(const char *table_title, hid_t loc_id, const char *dset_name, + hsize_t nfields, hid_t tid); + +static hid_t H5TB_create_type(hid_t loc_id, const char *dset_name, size_t type_size, + const size_t *field_offset, const size_t *field_sizes, hid_t ftype_id); /*------------------------------------------------------------------------- -* -* Create functions -* -*------------------------------------------------------------------------- -*/ + * + * Create functions + * + *------------------------------------------------------------------------- + */ /*------------------------------------------------------------------------- -* Function: H5TBmake_table -* -* Purpose: Make a table -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* Quincey Koziol -* -* Date: January 17, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBmake_table(const char *table_title, - hid_t loc_id, - const char *dset_name, - hsize_t nfields, - hsize_t nrecords, - size_t type_size, - const char *field_names[], - const size_t *field_offset, - const hid_t *field_types, - hsize_t chunk_size, - void *fill_data, - int compress, - const void *buf) + * Function: H5TBmake_table + * + * Purpose: Make a table + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * Quincey Koziol + * + * Date: January 17, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBmake_table(const char *table_title, hid_t loc_id, const char *dset_name, hsize_t nfields, + hsize_t nrecords, size_t type_size, const char *field_names[], const size_t *field_offset, + const hid_t *field_types, hsize_t chunk_size, void *fill_data, int compress, const void *buf) { - hid_t did = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t mem_type_id = H5I_BADID; - hid_t plist_id = H5I_BADID; - hid_t attr_id = H5I_BADID; - hsize_t dims[1]; - hsize_t dims_chunk[1]; - hsize_t maxdims[1] = {H5S_UNLIMITED}; - char attr_name[255]; - char *member_name = NULL; - unsigned char *tmp_buf = NULL; - hsize_t i; - herr_t ret_val = -1; + hid_t did = H5I_BADID; + hid_t sid = H5I_BADID; + hid_t mem_type_id = H5I_BADID; + hid_t plist_id = H5I_BADID; + hid_t attr_id = H5I_BADID; + hsize_t dims[1]; + hsize_t dims_chunk[1]; + hsize_t maxdims[1] = {H5S_UNLIMITED}; + char attr_name[255]; + char * member_name = NULL; + unsigned char *tmp_buf = NULL; + hsize_t i; + herr_t ret_val = -1; /* check the arguments */ if (table_title == NULL) { - goto out; + goto out; } if (dset_name == NULL) { - goto out; + goto out; } if (field_names == NULL) { - goto out; + goto out; } - + dims[0] = nrecords; dims_chunk[0] = chunk_size; /* create the memory data type. */ - if((mem_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0) + if ((mem_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0) goto out; /* insert fields. */ - for(i = 0; i < nfields; i++) - if(H5Tinsert(mem_type_id, field_names[i], field_offset[i], field_types[i] ) < 0) + for (i = 0; i < nfields; i++) + if (H5Tinsert(mem_type_id, field_names[i], field_offset[i], field_types[i]) < 0) goto out; /* create a simple data space with unlimited size */ - if((sid = H5Screate_simple(1, dims, maxdims)) < 0) + if ((sid = H5Screate_simple(1, dims, maxdims)) < 0) goto out; /* modify dataset creation properties, i.e. enable chunking */ - if((plist_id = H5Pcreate(H5P_DATASET_CREATE)) < 0) + if ((plist_id = H5Pcreate(H5P_DATASET_CREATE)) < 0) goto out; - if(H5Pset_chunk(plist_id, 1, dims_chunk) < 0) + if (H5Pset_chunk(plist_id, 1, dims_chunk) < 0) goto out; /* set the fill value using a struct as the data type. */ - if(fill_data) - if(H5Pset_fill_value(plist_id, mem_type_id, fill_data) < 0) + if (fill_data) + if (H5Pset_fill_value(plist_id, mem_type_id, fill_data) < 0) goto out; /* dataset creation property list is modified to use GZIP compression with the compression effort set to 6. */ - if(compress) - if(H5Pset_deflate(plist_id, 6) < 0) + if (compress) + if (H5Pset_deflate(plist_id, 6) < 0) goto out; /* create the dataset. */ - if((did = H5Dcreate2(loc_id, dset_name, mem_type_id, sid, H5P_DEFAULT, plist_id, H5P_DEFAULT)) < 0) + if ((did = H5Dcreate2(loc_id, dset_name, mem_type_id, sid, H5P_DEFAULT, plist_id, H5P_DEFAULT)) < 0) goto out; /* only write if there is something to write */ - if(buf) - if(H5Dwrite(did, mem_type_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) + if (buf) + if (H5Dwrite(did, mem_type_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) goto out; /* terminate access to the data space. */ - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; sid = H5I_BADID; /* end access to the dataset */ - if(H5Dclose(did) < 0) + if (H5Dclose(did) < 0) goto out; did = H5I_BADID; /* end access to the property list */ - if(H5Pclose(plist_id) < 0) + if (H5Pclose(plist_id) < 0) goto out; plist_id = H5I_BADID; /*------------------------------------------------------------------------- - * set the conforming table attributes - *------------------------------------------------------------------------- - */ + * set the conforming table attributes + *------------------------------------------------------------------------- + */ /* attach the CLASS attribute */ - if(H5LTset_attribute_string(loc_id, dset_name, "CLASS", TABLE_CLASS) < 0) + if (H5LTset_attribute_string(loc_id, dset_name, "CLASS", TABLE_CLASS) < 0) goto out; /* attach the VERSION attribute */ - if(H5LTset_attribute_string(loc_id, dset_name, "VERSION", TABLE_VERSION) < 0) + if (H5LTset_attribute_string(loc_id, dset_name, "VERSION", TABLE_VERSION) < 0) goto out; /* attach the TITLE attribute */ - if(H5LTset_attribute_string(loc_id, dset_name, "TITLE", table_title) < 0) + if (H5LTset_attribute_string(loc_id, dset_name, "TITLE", table_title) < 0) goto out; /* attach the FIELD_ name attribute */ - for(i = 0; i < nfields; i++) { + for (i = 0; i < nfields; i++) { /* get the member name */ - if(NULL == (member_name = H5Tget_member_name(mem_type_id, (unsigned)i))) + if (NULL == (member_name = H5Tget_member_name(mem_type_id, (unsigned)i))) goto out; HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_NAME", (int)i); /* attach the attribute */ - if(H5LTset_attribute_string(loc_id, dset_name, attr_name, member_name) < 0) + if (H5LTset_attribute_string(loc_id, dset_name, attr_name, member_name) < 0) goto out; H5free_memory(member_name); @@ -196,357 +178,343 @@ herr_t H5TBmake_table(const char *table_title, } /* end for */ /* attach the FIELD_ fill value attribute */ - if(fill_data) { + if (fill_data) { tmp_buf = (unsigned char *)fill_data; /* open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; - if((sid = H5Screate(H5S_SCALAR)) < 0) + if ((sid = H5Screate(H5S_SCALAR)) < 0) goto out; - for(i = 0; i < nfields; i++) { + for (i = 0; i < nfields; i++) { HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)i); - if((attr_id = H5Acreate2(did, attr_name, field_types[i], sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((attr_id = H5Acreate2(did, attr_name, field_types[i], sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; - if(H5Awrite(attr_id, field_types[i], tmp_buf + field_offset[i]) < 0) + if (H5Awrite(attr_id, field_types[i], tmp_buf + field_offset[i]) < 0) goto out; - if(H5Aclose(attr_id) < 0) + if (H5Aclose(attr_id) < 0) goto out; attr_id = H5I_BADID; } /* end for */ /* terminate access to the data space. */ - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; sid = H5I_BADID; /* end access to the dataset */ - if(H5Dclose(did) < 0) + if (H5Dclose(did) < 0) goto out; did = H5I_BADID; } /* end if */ /* release the datatype. */ - if(H5Tclose(mem_type_id) < 0) + if (H5Tclose(mem_type_id) < 0) goto out; mem_type_id = H5I_BADID; ret_val = 0; out: - if(member_name) + if (member_name) H5free_memory(member_name); - if(attr_id > 0) - if(H5Aclose(attr_id) < 0) + if (attr_id > 0) + if (H5Aclose(attr_id) < 0) ret_val = -1; - if(plist_id > 0) - if(H5Pclose(plist_id) < 0) + if (plist_id > 0) + if (H5Pclose(plist_id) < 0) ret_val = -1; - if(sid > 0) - if(H5Sclose(sid) < 0) + if (sid > 0) + if (H5Sclose(sid) < 0) ret_val = -1; - if(did > 0) - if(H5Dclose(did) < 0) + if (did > 0) + if (H5Dclose(did) < 0) ret_val = -1; - if(mem_type_id > 0) - if(H5Tclose(mem_type_id) < 0) + if (mem_type_id > 0) + if (H5Tclose(mem_type_id) < 0) ret_val = -1; return ret_val; } /* end H5TBmake_table() */ /*------------------------------------------------------------------------- -* -* Write functions -* -*------------------------------------------------------------------------- -*/ + * + * Write functions + * + *------------------------------------------------------------------------- + */ /*------------------------------------------------------------------------- -* Function: H5TBappend_records -* -* Purpose: Appends records to a table -* -* Return: Success: 0, Failure: -1 -* -* Programmers: -* Pedro Vicente, pvn@ncsa.uiuc.edu -* Quincey Koziol -* -* Date: November 19, 2001 -* -* Comments: Uses memory offsets -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBappend_records(hid_t loc_id, - const char *dset_name, - hsize_t nrecords, - size_t type_size, - const size_t *field_offset, - const size_t *field_sizes, - const void *buf) + * Function: H5TBappend_records + * + * Purpose: Appends records to a table + * + * Return: Success: 0, Failure: -1 + * + * Programmers: + * Pedro Vicente, pvn@ncsa.uiuc.edu + * Quincey Koziol + * + * Date: November 19, 2001 + * + * Comments: Uses memory offsets + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBappend_records(hid_t loc_id, const char *dset_name, hsize_t nrecords, size_t type_size, + const size_t *field_offset, const size_t *field_sizes, const void *buf) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t mem_type_id = H5I_BADID; - hsize_t nrecords_orig; - hsize_t nfields; - herr_t ret_val = -1; + hid_t did = H5I_BADID; + hid_t tid = H5I_BADID; + hid_t mem_type_id = H5I_BADID; + hsize_t nrecords_orig; + hsize_t nfields; + herr_t ret_val = -1; /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; /* get the original number of records and fields */ - if(H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords_orig) < 0) + if (H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords_orig) < 0) goto out; /* open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get the datatypes */ - if((tid = H5Dget_type(did)) < 0) + if ((tid = H5Dget_type(did)) < 0) goto out; - if((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, tid)) < 0) + if ((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, tid)) < 0) goto out; /* append the records */ - if((H5TB_common_append_records(did, mem_type_id, (size_t)nrecords, nrecords_orig, buf)) < 0) + if ((H5TB_common_append_records(did, mem_type_id, (size_t)nrecords, nrecords_orig, buf)) < 0) goto out; ret_val = 0; out: - if(tid > 0) - if(H5Tclose(tid) < 0) + if (tid > 0) + if (H5Tclose(tid) < 0) ret_val = -1; - if(mem_type_id > 0) - if(H5Tclose(mem_type_id) < 0) + if (mem_type_id > 0) + if (H5Tclose(mem_type_id) < 0) ret_val = -1; - if(did > 0) - if(H5Dclose(did) < 0) + if (did > 0) + if (H5Dclose(did) < 0) ret_val = -1; return ret_val; } /* end H5TBappend_records() */ /*------------------------------------------------------------------------- -* Function: H5TBwrite_records -* -* Purpose: Writes records -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 19, 2001 -* -* Comments: Uses memory offsets -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBwrite_records(hid_t loc_id, - const char *dset_name, - hsize_t start, - hsize_t nrecords, - size_t type_size, - const size_t *field_offset, - const size_t *field_sizes, - const void *buf) + * Function: H5TBwrite_records + * + * Purpose: Writes records + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: November 19, 2001 + * + * Comments: Uses memory offsets + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBwrite_records(hid_t loc_id, const char *dset_name, hsize_t start, hsize_t nrecords, size_t type_size, + const size_t *field_offset, const size_t *field_sizes, const void *buf) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; - hid_t mem_type_id = H5I_BADID; - hsize_t count[1]; - hsize_t offset[1]; - hsize_t mem_size[1]; - hsize_t dims[1]; - herr_t ret_val = -1; + hid_t did = H5I_BADID; + hid_t tid = H5I_BADID; + hid_t sid = H5I_BADID; + hid_t m_sid = H5I_BADID; + hid_t mem_type_id = H5I_BADID; + hsize_t count[1]; + hsize_t offset[1]; + hsize_t mem_size[1]; + hsize_t dims[1]; + herr_t ret_val = -1; /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; /* open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get the datatype */ - if((tid = H5Dget_type(did)) < 0) + if ((tid = H5Dget_type(did)) < 0) goto out; - if((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, tid)) < 0) + if ((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, tid)) < 0) goto out; /* get the dataspace handle */ - if((sid = H5Dget_space(did)) < 0) + if ((sid = H5Dget_space(did)) < 0) goto out; /* get records */ - if(H5Sget_simple_extent_dims(sid, dims, NULL) < 0) + if (H5Sget_simple_extent_dims(sid, dims, NULL) < 0) goto out; - if(start + nrecords > dims[0]) + if (start + nrecords > dims[0]) goto out; /* define a hyperslab in the dataset of the size of the records */ offset[0] = start; count[0] = nrecords; - if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) + if (H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) goto out; /* create a memory dataspace handle */ mem_size[0] = count[0]; - if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) + if ((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) goto out; - if(H5Dwrite(did, mem_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0) + if (H5Dwrite(did, mem_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0) goto out; ret_val = 0; out: - if(m_sid > 0) - if(H5Sclose(m_sid) < 0) + if (m_sid > 0) + if (H5Sclose(m_sid) < 0) ret_val = -1; - if(sid > 0) - if(H5Sclose(sid) < 0) + if (sid > 0) + if (H5Sclose(sid) < 0) ret_val = -1; - if(tid > 0) - if(H5Tclose(tid) < 0) + if (tid > 0) + if (H5Tclose(tid) < 0) ret_val = -1; - if(mem_type_id > 0) - if(H5Tclose(mem_type_id) < 0) + if (mem_type_id > 0) + if (H5Tclose(mem_type_id) < 0) ret_val = -1; - if(did > 0) - if(H5Dclose(did) < 0) + if (did > 0) + if (H5Dclose(did) < 0) ret_val = -1; return ret_val; } /* end H5TBwrite_records() */ /*------------------------------------------------------------------------- -* Function: H5TBwrite_fields_name -* -* Purpose: Writes fields -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 21, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBwrite_fields_name(hid_t loc_id, - const char *dset_name, - const char *field_names, - hsize_t start, - hsize_t nrecords, - size_t type_size, - const size_t *field_offset, - const size_t *field_sizes, - const void *buf) + * Function: H5TBwrite_fields_name + * + * Purpose: Writes fields + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: November 21, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBwrite_fields_name(hid_t loc_id, const char *dset_name, const char *field_names, hsize_t start, + hsize_t nrecords, size_t type_size, const size_t *field_offset, + const size_t *field_sizes, const void *buf) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t write_type_id = H5I_BADID; + hid_t did = H5I_BADID; + hid_t tid = H5I_BADID; + hid_t write_type_id = H5I_BADID; hid_t member_type_id = H5I_BADID; - hid_t nmtype_id = H5I_BADID; - hid_t m_sid = H5I_BADID; - hid_t file_space_id = H5I_BADID; - hid_t preserve_id = H5I_BADID; + hid_t nmtype_id = H5I_BADID; + hid_t m_sid = H5I_BADID; + hid_t file_space_id = H5I_BADID; + hid_t preserve_id = H5I_BADID; hssize_t nfields; hssize_t i, j; hsize_t count[1]; hsize_t offset[1]; - char *member_name = NULL; + char * member_name = NULL; size_t size_native; herr_t ret_val = -1; /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; - if (field_names == NULL) + if (field_names == NULL) goto out; /* create xfer properties to preserve initialized data */ - if((preserve_id = H5Pcreate(H5P_DATASET_XFER)) < 0) + if ((preserve_id = H5Pcreate(H5P_DATASET_XFER)) < 0) goto out; - if(H5Pset_preserve(preserve_id, 1) < 0) + if (H5Pset_preserve(preserve_id, 1) < 0) goto out; /* open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get the datatype */ - if((tid = H5Dget_type(did)) < 0) + if ((tid = H5Dget_type(did)) < 0) goto out; /* get the number of fields */ - if((nfields = H5Tget_nmembers(tid)) < 0) + if ((nfields = H5Tget_nmembers(tid)) < 0) goto out; /* create a write id */ - if((write_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0) + if ((write_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0) goto out; j = 0; /* iterate though the members */ - for(i = 0; i < nfields; i++) { + for (i = 0; i < nfields; i++) { /* get the member name */ - if(NULL == (member_name = H5Tget_member_name(tid, (unsigned)i))) + if (NULL == (member_name = H5Tget_member_name(tid, (unsigned)i))) goto out; - if(H5TB_find_field(member_name, field_names)) { + if (H5TB_find_field(member_name, field_names)) { /* get the member type */ - if((member_type_id = H5Tget_member_type(tid, (unsigned)i)) < 0) + if ((member_type_id = H5Tget_member_type(tid, (unsigned)i)) < 0) goto out; /* convert to native type */ - if((nmtype_id = H5Tget_native_type(member_type_id, H5T_DIR_DEFAULT)) < 0) + if ((nmtype_id = H5Tget_native_type(member_type_id, H5T_DIR_DEFAULT)) < 0) goto out; - if(0 == (size_native = H5Tget_size(nmtype_id))) + if (0 == (size_native = H5Tget_size(nmtype_id))) goto out; /* adjust, if necessary */ - if(field_sizes[j] != size_native) - if(H5Tset_size(nmtype_id, field_sizes[j]) < 0) + if (field_sizes[j] != size_native) + if (H5Tset_size(nmtype_id, field_sizes[j]) < 0) goto out; /* the field in the file is found by its name */ - if(field_offset) { - if(H5Tinsert(write_type_id, member_name, field_offset[j], nmtype_id) < 0) + if (field_offset) { + if (H5Tinsert(write_type_id, member_name, field_offset[j], nmtype_id) < 0) goto out; } /* end if */ /* only one field */ else { - if(H5Tinsert(write_type_id, member_name, (size_t)0, nmtype_id) < 0) + if (H5Tinsert(write_type_id, member_name, (size_t)0, nmtype_id) < 0) goto out; } /* end else */ j++; /* close */ - if(H5Tclose(member_type_id) < 0) + if (H5Tclose(member_type_id) < 0) goto out; member_type_id = H5I_BADID; - if(H5Tclose(nmtype_id) < 0) + if (H5Tclose(nmtype_id) < 0) goto out; nmtype_id = H5I_BADID; } /* end if */ @@ -556,156 +524,150 @@ herr_t H5TBwrite_fields_name(hid_t loc_id, } /* end for */ /* get the dataspace handle */ - if((file_space_id = H5Dget_space(did)) < 0) + if ((file_space_id = H5Dget_space(did)) < 0) goto out; - if((m_sid = H5Screate_simple(1, &nrecords, NULL)) < 0) + if ((m_sid = H5Screate_simple(1, &nrecords, NULL)) < 0) goto out; /* define a hyperslab in the dataset */ offset[0] = start; count[0] = nrecords; - if(H5Sselect_hyperslab(file_space_id, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) + if (H5Sselect_hyperslab(file_space_id, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) goto out; /* write */ - if(H5Dwrite(did, write_type_id, m_sid, file_space_id, preserve_id, buf) < 0) + if (H5Dwrite(did, write_type_id, m_sid, file_space_id, preserve_id, buf) < 0) goto out; ret_val = 0; out: - if(member_name) + if (member_name) H5free_memory(member_name); - if(preserve_id > 0) - if(H5Pclose(preserve_id) < 0) + if (preserve_id > 0) + if (H5Pclose(preserve_id) < 0) ret_val = -1; - if(write_type_id > 0) - if(H5Tclose(write_type_id) < 0) + if (write_type_id > 0) + if (H5Tclose(write_type_id) < 0) ret_val = -1; - if(tid > 0) - if(H5Tclose(tid) < 0) + if (tid > 0) + if (H5Tclose(tid) < 0) ret_val = -1; - if(file_space_id > 0) - if(H5Sclose(file_space_id) < 0) + if (file_space_id > 0) + if (H5Sclose(file_space_id) < 0) ret_val = -1; - if(m_sid > 0) - if(H5Sclose(m_sid) < 0) + if (m_sid > 0) + if (H5Sclose(m_sid) < 0) ret_val = -1; - if(did > 0) - if(H5Dclose(did) < 0) + if (did > 0) + if (H5Dclose(did) < 0) ret_val = -1; return ret_val; } /* end H5TBwrite_fields_name() */ /*------------------------------------------------------------------------- -* Function: H5TBwrite_fields_index -* -* Purpose: Writes fields -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 21, 2001 -* -* Comments: Uses memory offsets -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBwrite_fields_index(hid_t loc_id, - const char *dset_name, - hsize_t nfields, - const int *field_index, - hsize_t start, - hsize_t nrecords, - size_t type_size, - const size_t *field_offset, - const size_t *field_sizes, - const void *buf) + * Function: H5TBwrite_fields_index + * + * Purpose: Writes fields + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: November 21, 2001 + * + * Comments: Uses memory offsets + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBwrite_fields_index(hid_t loc_id, const char *dset_name, hsize_t nfields, const int *field_index, + hsize_t start, hsize_t nrecords, size_t type_size, const size_t *field_offset, + const size_t *field_sizes, const void *buf) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t write_type_id = H5I_BADID; - hid_t member_type_id = H5I_BADID; - hid_t nmtype_id = H5I_BADID; - hid_t m_sid = H5I_BADID; - hid_t file_space_id = H5I_BADID; - hid_t preserve_id = H5I_BADID; - hsize_t count[1]; - hsize_t offset[1]; - hsize_t i; - size_t size_native; - char *member_name = NULL; - herr_t ret_val = -1; + hid_t did = H5I_BADID; + hid_t tid = H5I_BADID; + hid_t write_type_id = H5I_BADID; + hid_t member_type_id = H5I_BADID; + hid_t nmtype_id = H5I_BADID; + hid_t m_sid = H5I_BADID; + hid_t file_space_id = H5I_BADID; + hid_t preserve_id = H5I_BADID; + hsize_t count[1]; + hsize_t offset[1]; + hsize_t i; + size_t size_native; + char * member_name = NULL; + herr_t ret_val = -1; /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; /* create xfer properties to preserve initialized data */ - if((preserve_id = H5Pcreate(H5P_DATASET_XFER)) < 0) + if ((preserve_id = H5Pcreate(H5P_DATASET_XFER)) < 0) goto out; - if(H5Pset_preserve(preserve_id, 1) < 0) + if (H5Pset_preserve(preserve_id, 1) < 0) goto out; /* open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get the datatype */ - if((tid = H5Dget_type(did)) < 0) + if ((tid = H5Dget_type(did)) < 0) goto out; /* create a write id */ - if((write_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0) + if ((write_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0) goto out; /* iterate tru the members */ - for(i = 0; i < nfields; i++) { - unsigned j; + for (i = 0; i < nfields; i++) { + unsigned j; /* Range check value */ - if(field_index[i] < 0) + if (field_index[i] < 0) goto out; j = (unsigned)field_index[i]; /* get the member name */ - if(NULL == (member_name = H5Tget_member_name(tid, j))) + if (NULL == (member_name = H5Tget_member_name(tid, j))) goto out; /* get the member type */ - if((member_type_id = H5Tget_member_type(tid, j)) < 0) + if ((member_type_id = H5Tget_member_type(tid, j)) < 0) goto out; /* convert to native type */ - if((nmtype_id = H5Tget_native_type(member_type_id,H5T_DIR_DEFAULT)) < 0) + if ((nmtype_id = H5Tget_native_type(member_type_id, H5T_DIR_DEFAULT)) < 0) goto out; - if(0 == (size_native = H5Tget_size(nmtype_id))) + if (0 == (size_native = H5Tget_size(nmtype_id))) goto out; - if(field_sizes[i] != size_native) - if(H5Tset_size(nmtype_id, field_sizes[i]) < 0) + if (field_sizes[i] != size_native) + if (H5Tset_size(nmtype_id, field_sizes[i]) < 0) goto out; /* the field in the file is found by its name */ - if(field_offset) { - if(H5Tinsert(write_type_id, member_name, field_offset[i], nmtype_id) < 0) + if (field_offset) { + if (H5Tinsert(write_type_id, member_name, field_offset[i], nmtype_id) < 0) goto out; } /* end if */ /* only one field */ else { - if(H5Tinsert(write_type_id, member_name, (size_t)0, nmtype_id) < 0) + if (H5Tinsert(write_type_id, member_name, (size_t)0, nmtype_id) < 0) goto out; } /* end else */ /* close */ - if(H5Tclose(member_type_id) < 0) + if (H5Tclose(member_type_id) < 0) goto out; member_type_id = H5I_BADID; - if(H5Tclose(nmtype_id) < 0) + if (H5Tclose(nmtype_id) < 0) goto out; nmtype_id = H5I_BADID; @@ -714,309 +676,295 @@ herr_t H5TBwrite_fields_index(hid_t loc_id, } /* end for */ /* get the dataspace handles */ - if((file_space_id = H5Dget_space(did)) < 0) + if ((file_space_id = H5Dget_space(did)) < 0) goto out; - if((m_sid = H5Screate_simple(1, &nrecords, NULL)) < 0) + if ((m_sid = H5Screate_simple(1, &nrecords, NULL)) < 0) goto out; /* define a hyperslab in the dataset */ offset[0] = start; count[0] = nrecords; - if(H5Sselect_hyperslab(file_space_id, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) + if (H5Sselect_hyperslab(file_space_id, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) goto out; /* write */ - if(H5Dwrite(did, write_type_id, m_sid, file_space_id, preserve_id, buf) < 0) + if (H5Dwrite(did, write_type_id, m_sid, file_space_id, preserve_id, buf) < 0) goto out; ret_val = 0; out: - if(member_name) + if (member_name) H5free_memory(member_name); - if(preserve_id > 0) - if(H5Pclose(preserve_id) < 0) + if (preserve_id > 0) + if (H5Pclose(preserve_id) < 0) ret_val = -1; - if(write_type_id > 0) - if(H5Tclose(write_type_id) < 0) + if (write_type_id > 0) + if (H5Tclose(write_type_id) < 0) ret_val = -1; - if(member_type_id > 0) - if(H5Tclose(member_type_id) < 0) + if (member_type_id > 0) + if (H5Tclose(member_type_id) < 0) ret_val = -1; - if(nmtype_id > 0) - if(H5Tclose(nmtype_id) < 0) + if (nmtype_id > 0) + if (H5Tclose(nmtype_id) < 0) ret_val = -1; - if(tid > 0) - if(H5Tclose(tid) < 0) + if (tid > 0) + if (H5Tclose(tid) < 0) ret_val = -1; - if(file_space_id > 0) - if(H5Sclose(file_space_id) < 0) + if (file_space_id > 0) + if (H5Sclose(file_space_id) < 0) ret_val = -1; - if(m_sid > 0) - if(H5Sclose(m_sid) < 0) + if (m_sid > 0) + if (H5Sclose(m_sid) < 0) ret_val = -1; - if(did > 0) - if(H5Dclose(did) < 0) + if (did > 0) + if (H5Dclose(did) < 0) ret_val = -1; return ret_val; } /* end H5TBwrite_fields_index() */ - /*------------------------------------------------------------------------- -* -* Read functions -* -*------------------------------------------------------------------------- -*/ - + * + * Read functions + * + *------------------------------------------------------------------------- + */ /*------------------------------------------------------------------------- -* Function: H5TBread_table -* -* Purpose: Reads a table -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 20, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBread_table(hid_t loc_id, - const char *dset_name, - size_t type_size, - const size_t *field_offset, - const size_t *field_sizes, - void *dst_buf) + * Function: H5TBread_table + * + * Purpose: Reads a table + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: November 20, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBread_table(hid_t loc_id, const char *dset_name, size_t type_size, const size_t *field_offset, + const size_t *field_sizes, void *dst_buf) { - hid_t did = H5I_BADID; - hid_t ftype_id = H5I_BADID; - hid_t mem_type_id = H5I_BADID; - hid_t sid = H5I_BADID; - hsize_t dims[1]; - herr_t ret_val = -1; + hid_t did = H5I_BADID; + hid_t ftype_id = H5I_BADID; + hid_t mem_type_id = H5I_BADID; + hid_t sid = H5I_BADID; + hsize_t dims[1]; + herr_t ret_val = -1; /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; /* open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get the dataspace handle */ - if((sid = H5Dget_space(did)) < 0) + if ((sid = H5Dget_space(did)) < 0) goto out; /* get dimensions */ - if(H5Sget_simple_extent_dims(sid, dims, NULL) < 0) + if (H5Sget_simple_extent_dims(sid, dims, NULL) < 0) goto out; /* get the datatypes */ - if((ftype_id = H5Dget_type (did)) < 0) + if ((ftype_id = H5Dget_type(did)) < 0) goto out; - if((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, ftype_id)) < 0) + if ((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, ftype_id)) < + 0) goto out; /* read */ - if(H5Dread(did, mem_type_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, dst_buf) < 0) + if (H5Dread(did, mem_type_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, dst_buf) < 0) goto out; ret_val = 0; out: - if(mem_type_id > 0) - if(H5Tclose(mem_type_id) < 0) + if (mem_type_id > 0) + if (H5Tclose(mem_type_id) < 0) ret_val = -1; - if(ftype_id > 0) - if(H5Tclose(ftype_id) < 0) + if (ftype_id > 0) + if (H5Tclose(ftype_id) < 0) ret_val = -1; - if(sid > 0) - if(H5Sclose(sid) < 0) + if (sid > 0) + if (H5Sclose(sid) < 0) ret_val = -1; - if(did > 0) - if(H5Dclose(did) < 0) + if (did > 0) + if (H5Dclose(did) < 0) ret_val = -1; return ret_val; } /* end H5TBread_table() */ /*------------------------------------------------------------------------- -* Function: H5TBread_records -* -* Purpose: Reads records -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 19, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBread_records(hid_t loc_id, - const char *dset_name, - hsize_t start, - hsize_t nrecords, - size_t type_size, - const size_t *field_offset, - const size_t *field_sizes, - void *buf) + * Function: H5TBread_records + * + * Purpose: Reads records + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: November 19, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBread_records(hid_t loc_id, const char *dset_name, hsize_t start, hsize_t nrecords, size_t type_size, + const size_t *field_offset, const size_t *field_sizes, void *buf) { - hid_t did = H5I_BADID; - hid_t ftype_id = H5I_BADID; - hid_t mem_type_id = H5I_BADID; - hsize_t nrecords_orig; - hsize_t nfields; - herr_t ret_val = -1; + hid_t did = H5I_BADID; + hid_t ftype_id = H5I_BADID; + hid_t mem_type_id = H5I_BADID; + hsize_t nrecords_orig; + hsize_t nfields; + herr_t ret_val = -1; /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; /* get the number of records and fields */ - if(H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords_orig) < 0) + if (H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords_orig) < 0) goto out; /* open the dataset */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get the datatypes */ - if((ftype_id = H5Dget_type(did)) < 0) + if ((ftype_id = H5Dget_type(did)) < 0) goto out; - if((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, ftype_id)) < 0) + if ((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, ftype_id)) < + 0) goto out; /* read the records */ - if((H5TB_common_read_records(did, mem_type_id, start, (size_t)nrecords, nrecords_orig, buf)) < 0) + if ((H5TB_common_read_records(did, mem_type_id, start, (size_t)nrecords, nrecords_orig, buf)) < 0) goto out; ret_val = 0; out: - if(mem_type_id > 0) - if(H5Tclose(mem_type_id) < 0) + if (mem_type_id > 0) + if (H5Tclose(mem_type_id) < 0) ret_val = -1; - if(ftype_id > 0) - if(H5Tclose(ftype_id) < 0) + if (ftype_id > 0) + if (H5Tclose(ftype_id) < 0) ret_val = -1; - if(did > 0) - if(H5Dclose(did) < 0) + if (did > 0) + if (H5Dclose(did) < 0) ret_val = -1; return ret_val; } /* end H5TBread_records() */ /*------------------------------------------------------------------------- -* Function: H5TBread_fields_name -* -* Purpose: Reads fields -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 19, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBread_fields_name(hid_t loc_id, - const char *dset_name, - const char *field_names, - hsize_t start, - hsize_t nrecords, - size_t type_size, - const size_t *field_offset, - const size_t *field_sizes, - void *buf) + * Function: H5TBread_fields_name + * + * Purpose: Reads fields + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: November 19, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBread_fields_name(hid_t loc_id, const char *dset_name, const char *field_names, hsize_t start, + hsize_t nrecords, size_t type_size, const size_t *field_offset, + const size_t *field_sizes, void *buf) { - hid_t did = H5I_BADID; - hid_t ftype_id = H5I_BADID; + hid_t did = H5I_BADID; + hid_t ftype_id = H5I_BADID; hid_t mem_type_id = H5I_BADID; - hid_t mtype_id = H5I_BADID; - hid_t nmtype_id = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; + hid_t mtype_id = H5I_BADID; + hid_t nmtype_id = H5I_BADID; + hid_t sid = H5I_BADID; + hid_t m_sid = H5I_BADID; hssize_t nfields; hsize_t count[1]; hsize_t offset[1]; hsize_t mem_size[1]; size_t size_native; - char *member_name = NULL; + char * member_name = NULL; hssize_t i, j; herr_t ret_val = -1; - /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; - if (field_names == NULL) + if (field_names == NULL) goto out; /* open the dataset */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get the datatype */ - if((ftype_id = H5Dget_type(did)) < 0) + if ((ftype_id = H5Dget_type(did)) < 0) goto out; /* get the number of fields */ - if((nfields = H5Tget_nmembers(ftype_id)) < 0) + if ((nfields = H5Tget_nmembers(ftype_id)) < 0) goto out; /* create a memory read id */ - if((mem_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0) + if ((mem_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0) goto out; /* iterate through the members */ - for(i = 0, j = 0; i < nfields; i++) { + for (i = 0, j = 0; i < nfields; i++) { /* get the member name */ - if(NULL == (member_name = H5Tget_member_name(ftype_id, (unsigned)i))) + if (NULL == (member_name = H5Tget_member_name(ftype_id, (unsigned)i))) goto out; - if(H5TB_find_field(member_name, field_names)) { + if (H5TB_find_field(member_name, field_names)) { /* get the member type */ - if((mtype_id = H5Tget_member_type(ftype_id, (unsigned)i)) < 0) + if ((mtype_id = H5Tget_member_type(ftype_id, (unsigned)i)) < 0) goto out; /* convert to native type */ - if((nmtype_id = H5Tget_native_type(mtype_id, H5T_DIR_DEFAULT)) < 0) + if ((nmtype_id = H5Tget_native_type(mtype_id, H5T_DIR_DEFAULT)) < 0) goto out; - if(0 == (size_native = H5Tget_size(nmtype_id))) + if (0 == (size_native = H5Tget_size(nmtype_id))) goto out; - if(field_sizes[j] != size_native) - if(H5Tset_size(nmtype_id, field_sizes[j]) < 0) + if (field_sizes[j] != size_native) + if (H5Tset_size(nmtype_id, field_sizes[j]) < 0) goto out; /* the field in the file is found by its name */ - if(field_offset) { - if(H5Tinsert(mem_type_id, member_name, field_offset[j], nmtype_id) < 0) + if (field_offset) { + if (H5Tinsert(mem_type_id, member_name, field_offset[j], nmtype_id) < 0) goto out; } /* end if */ else { - if(H5Tinsert(mem_type_id, member_name, (size_t)0, nmtype_id) < 0) + if (H5Tinsert(mem_type_id, member_name, (size_t)0, nmtype_id) < 0) goto out; } /* end else */ /* close */ - if(H5Tclose(mtype_id) < 0) + if (H5Tclose(mtype_id) < 0) goto out; mtype_id = H5I_BADID; - if(H5Tclose(nmtype_id) < 0) + if (H5Tclose(nmtype_id) < 0) goto out; nmtype_id = H5I_BADID; j++; @@ -1027,159 +975,153 @@ herr_t H5TBread_fields_name(hid_t loc_id, } /* end for */ /* check to make sure field was found, no reason to continue if it does not exist */ - if(j == 0) - goto out; - + if (j == 0) + goto out; + /* get the dataspace handle */ - if((sid = H5Dget_space(did)) < 0) + if ((sid = H5Dget_space(did)) < 0) goto out; /* define a hyperslab in the dataset */ offset[0] = start; count[0] = nrecords; - if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) + if (H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) goto out; /* create a memory dataspace handle */ mem_size[0] = count[0]; - if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) + if ((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) goto out; /* read */ - if(H5Dread(did, mem_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0) + if (H5Dread(did, mem_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0) goto out; ret_val = 0; out: - if(member_name) + if (member_name) H5free_memory(member_name); - if(mtype_id > 0) - if(H5Tclose(mtype_id) < 0) + if (mtype_id > 0) + if (H5Tclose(mtype_id) < 0) ret_val = -1; - if(nmtype_id > 0) - if(H5Tclose(nmtype_id) < 0) + if (nmtype_id > 0) + if (H5Tclose(nmtype_id) < 0) ret_val = -1; - if(mem_type_id > 0) - if(H5Tclose(mem_type_id) < 0) + if (mem_type_id > 0) + if (H5Tclose(mem_type_id) < 0) ret_val = -1; - if(ftype_id > 0) - if(H5Tclose(ftype_id) < 0) + if (ftype_id > 0) + if (H5Tclose(ftype_id) < 0) ret_val = -1; - if(m_sid > 0) - if(H5Sclose(m_sid) < 0) + if (m_sid > 0) + if (H5Sclose(m_sid) < 0) ret_val = -1; - if(sid > 0) - if(H5Sclose(sid) < 0) + if (sid > 0) + if (H5Sclose(sid) < 0) ret_val = -1; - if(did > 0) - if(H5Dclose(did) < 0) + if (did > 0) + if (H5Dclose(did) < 0) ret_val = -1; return ret_val; } /* end H5TBread_fields_name() */ /*------------------------------------------------------------------------- -* Function: H5TBread_fields_index -* -* Purpose: Reads fields -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 19, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBread_fields_index(hid_t loc_id, - const char *dset_name, - hsize_t nfields, - const int *field_index, - hsize_t start, - hsize_t nrecords, - size_t type_size, - const size_t *field_offset, - const size_t *field_sizes, - void *buf) + * Function: H5TBread_fields_index + * + * Purpose: Reads fields + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: November 19, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBread_fields_index(hid_t loc_id, const char *dset_name, hsize_t nfields, const int *field_index, + hsize_t start, hsize_t nrecords, size_t type_size, const size_t *field_offset, + const size_t *field_sizes, void *buf) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t read_type_id = H5I_BADID; - hid_t member_type_id = H5I_BADID; - hid_t nmtype_id = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; - hsize_t count[1]; - hsize_t offset[1]; - hsize_t mem_size[1]; - hsize_t i; - size_t size_native; - char *member_name = NULL; - herr_t ret_val = -1; + hid_t did = H5I_BADID; + hid_t tid = H5I_BADID; + hid_t read_type_id = H5I_BADID; + hid_t member_type_id = H5I_BADID; + hid_t nmtype_id = H5I_BADID; + hid_t sid = H5I_BADID; + hid_t m_sid = H5I_BADID; + hsize_t count[1]; + hsize_t offset[1]; + hsize_t mem_size[1]; + hsize_t i; + size_t size_native; + char * member_name = NULL; + herr_t ret_val = -1; /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; /* open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get the datatype */ - if((tid = H5Dget_type(did)) < 0) + if ((tid = H5Dget_type(did)) < 0) goto out; /* create a read id */ - if((read_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0) + if ((read_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0) goto out; /* iterate tru the members */ - for(i = 0; i < nfields; i++) { - unsigned j; + for (i = 0; i < nfields; i++) { + unsigned j; /* Range check */ - if(field_index[i] < 0) + if (field_index[i] < 0) goto out; j = (unsigned)field_index[i]; /* get the member name */ - if(NULL == (member_name = H5Tget_member_name(tid, (unsigned)j))) + if (NULL == (member_name = H5Tget_member_name(tid, (unsigned)j))) goto out; /* get the member type */ - if((member_type_id = H5Tget_member_type(tid, (unsigned)j)) < 0) + if ((member_type_id = H5Tget_member_type(tid, (unsigned)j)) < 0) goto out; /* convert to native type */ - if((nmtype_id = H5Tget_native_type(member_type_id, H5T_DIR_DEFAULT)) < 0) + if ((nmtype_id = H5Tget_native_type(member_type_id, H5T_DIR_DEFAULT)) < 0) goto out; - if(0 == (size_native = H5Tget_size(nmtype_id))) + if (0 == (size_native = H5Tget_size(nmtype_id))) goto out; - if(field_sizes[i] != size_native) - if(H5Tset_size(nmtype_id, field_sizes[i]) < 0) + if (field_sizes[i] != size_native) + if (H5Tset_size(nmtype_id, field_sizes[i]) < 0) goto out; /* the field in the file is found by its name */ - if(field_offset) { - if(H5Tinsert(read_type_id, member_name, field_offset[i], nmtype_id) < 0) + if (field_offset) { + if (H5Tinsert(read_type_id, member_name, field_offset[i], nmtype_id) < 0) goto out; } /* end if */ else { - if(H5Tinsert(read_type_id, member_name, (size_t)0, nmtype_id) < 0) + if (H5Tinsert(read_type_id, member_name, (size_t)0, nmtype_id) < 0) goto out; } /* end else */ /* close the member type */ - if(H5Tclose(member_type_id) < 0) + if (H5Tclose(member_type_id) < 0) goto out; member_type_id = H5I_BADID; - if(H5Tclose(nmtype_id) < 0) + if (H5Tclose(nmtype_id) < 0) goto out; nmtype_id = H5I_BADID; @@ -1188,683 +1130,671 @@ herr_t H5TBread_fields_index(hid_t loc_id, } /* end for */ /* get the dataspace handle */ - if((sid = H5Dget_space(did)) < 0) + if ((sid = H5Dget_space(did)) < 0) goto out; /* define a hyperslab in the dataset */ offset[0] = start; count[0] = nrecords; - if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) + if (H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) goto out; /* create a memory dataspace handle */ mem_size[0] = count[0]; - if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) + if ((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) goto out; /* read */ - if(H5Dread( did, read_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0) + if (H5Dread(did, read_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0) goto out; ret_val = 0; out: - if(member_name) + if (member_name) H5free_memory(member_name); - if(read_type_id > 0) - if(H5Tclose(read_type_id) < 0) + if (read_type_id > 0) + if (H5Tclose(read_type_id) < 0) ret_val = -1; - if(member_type_id > 0) - if(H5Tclose(member_type_id) < 0) + if (member_type_id > 0) + if (H5Tclose(member_type_id) < 0) ret_val = -1; - if(nmtype_id > 0) - if(H5Tclose(nmtype_id) < 0) + if (nmtype_id > 0) + if (H5Tclose(nmtype_id) < 0) ret_val = -1; - if(tid > 0) - if(H5Tclose(tid) < 0) + if (tid > 0) + if (H5Tclose(tid) < 0) ret_val = -1; - if(m_sid > 0) - if(H5Sclose(m_sid) < 0) + if (m_sid > 0) + if (H5Sclose(m_sid) < 0) ret_val = -1; - if(sid > 0) - if(H5Sclose(sid) < 0) + if (sid > 0) + if (H5Sclose(sid) < 0) ret_val = -1; - if(did > 0) - if(H5Dclose(did) < 0) + if (did > 0) + if (H5Dclose(did) < 0) ret_val = -1; return ret_val; } /* end H5TBread_fields_index() */ - /*------------------------------------------------------------------------- -* -* Manipulation functions -* -*------------------------------------------------------------------------- -*/ + * + * Manipulation functions + * + *------------------------------------------------------------------------- + */ /*------------------------------------------------------------------------- -* Function: H5TBdelete_record -* -* Purpose: Delete records from middle of table ("pulling up" all the records after it) -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 26, 2001 -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBdelete_record(hid_t loc_id, - const char *dset_name, - hsize_t start, - hsize_t nrecords) + * Function: H5TBdelete_record + * + * Purpose: Delete records from middle of table ("pulling up" all the records after it) + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: November 26, 2001 + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBdelete_record(hid_t loc_id, const char *dset_name, hsize_t start, hsize_t nrecords) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; - hid_t mem_type_id = H5I_BADID; - hsize_t nfields; - hsize_t ntotal_records; - hsize_t read_start; - hsize_t read_nrecords; - hsize_t count[1]; - hsize_t offset[1]; - hsize_t mem_size[1]; - hsize_t dims[1]; - size_t src_size; - size_t *src_offset = NULL; - size_t *src_sizes = NULL; - unsigned char *tmp_buf = NULL; - herr_t ret_val = -1; + hid_t did = H5I_BADID; + hid_t tid = H5I_BADID; + hid_t sid = H5I_BADID; + hid_t m_sid = H5I_BADID; + hid_t mem_type_id = H5I_BADID; + hsize_t nfields; + hsize_t ntotal_records; + hsize_t read_start; + hsize_t read_nrecords; + hsize_t count[1]; + hsize_t offset[1]; + hsize_t mem_size[1]; + hsize_t dims[1]; + size_t src_size; + size_t * src_offset = NULL; + size_t * src_sizes = NULL; + unsigned char *tmp_buf = NULL; + herr_t ret_val = -1; - /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; /*------------------------------------------------------------------------- - * first we get information about type size and offsets on disk - *------------------------------------------------------------------------- - */ + * first we get information about type size and offsets on disk + *------------------------------------------------------------------------- + */ /* get the number of records and fields */ - if(H5TBget_table_info(loc_id, dset_name, &nfields, &ntotal_records) < 0) + if (H5TBget_table_info(loc_id, dset_name, &nfields, &ntotal_records) < 0) goto out; - if(NULL == (src_offset = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t)))) + if (NULL == (src_offset = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t)))) goto out; - if(NULL == (src_sizes = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t)))) + if (NULL == (src_sizes = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t)))) goto out; /* get field info */ - if(H5TBget_field_info(loc_id, dset_name, NULL, src_sizes, src_offset, &src_size) < 0) + if (H5TBget_field_info(loc_id, dset_name, NULL, src_sizes, src_offset, &src_size) < 0) goto out; /* open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /*------------------------------------------------------------------------- - * read the records after the deleted one(s) - *------------------------------------------------------------------------- - */ + * read the records after the deleted one(s) + *------------------------------------------------------------------------- + */ - read_start = start + nrecords; + read_start = start + nrecords; read_nrecords = ntotal_records - read_start; - if(read_nrecords) { - if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)read_nrecords, src_size))) + if (read_nrecords) { + if (NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)read_nrecords, src_size))) goto out; /* read the records after the deleted one(s) */ - if(H5TBread_records(loc_id, dset_name, read_start, read_nrecords, src_size, src_offset, src_sizes, tmp_buf) < 0) + if (H5TBread_records(loc_id, dset_name, read_start, read_nrecords, src_size, src_offset, src_sizes, + tmp_buf) < 0) goto out; /*------------------------------------------------------------------------- - * write the records in another position - *------------------------------------------------------------------------- - */ + * write the records in another position + *------------------------------------------------------------------------- + */ /* get the datatype */ - if((tid = H5Dget_type(did)) < 0) + if ((tid = H5Dget_type(did)) < 0) goto out; /* get the dataspace handle */ - if((sid = H5Dget_space(did)) < 0) + if ((sid = H5Dget_space(did)) < 0) goto out; - /* create the memory data type. */ - if((mem_type_id = H5TB_create_type( loc_id, dset_name, src_size, src_offset, src_sizes, tid)) < 0) - goto out; + /* create the memory data type. */ + if ((mem_type_id = H5TB_create_type(loc_id, dset_name, src_size, src_offset, src_sizes, tid)) < 0) + goto out; /* define a hyperslab in the dataset of the size of the records */ offset[0] = start; count[0] = read_nrecords; - if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) + if (H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) goto out; /* create a memory dataspace handle */ mem_size[0] = count[0]; - if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) + if ((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) goto out; - if(H5Dwrite(did, mem_type_id, m_sid, sid, H5P_DEFAULT, tmp_buf) < 0) + if (H5Dwrite(did, mem_type_id, m_sid, sid, H5P_DEFAULT, tmp_buf) < 0) goto out; /* close */ - if(H5Sclose(m_sid) < 0) + if (H5Sclose(m_sid) < 0) goto out; m_sid = H5I_BADID; - if(H5Tclose(mem_type_id) < 0) - goto out; + if (H5Tclose(mem_type_id) < 0) + goto out; mem_type_id = H5I_BADID; - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; sid = H5I_BADID; - if(H5Tclose(tid) < 0) + if (H5Tclose(tid) < 0) goto out; tid = H5I_BADID; } /* read_nrecords */ /*------------------------------------------------------------------------- - * change the dataset dimension - *------------------------------------------------------------------------- - */ + * change the dataset dimension + *------------------------------------------------------------------------- + */ dims[0] = ntotal_records - nrecords; - if(H5Dset_extent(did, dims) < 0) + if (H5Dset_extent(did, dims) < 0) goto out; ret_val = 0; out: - if(tmp_buf) + if (tmp_buf) HDfree(tmp_buf); - if(src_offset) + if (src_offset) HDfree(src_offset); - if(src_sizes) + if (src_sizes) HDfree(src_sizes); - if(mem_type_id > 0) - if(H5Tclose(mem_type_id) < 0) + if (mem_type_id > 0) + if (H5Tclose(mem_type_id) < 0) ret_val = -1; - if(tid > 0) - if(H5Tclose(tid) < 0) + if (tid > 0) + if (H5Tclose(tid) < 0) ret_val = -1; - if(m_sid > 0) - if(H5Sclose(m_sid) < 0) + if (m_sid > 0) + if (H5Sclose(m_sid) < 0) ret_val = -1; - if(sid > 0) - if(H5Sclose(sid) < 0) + if (sid > 0) + if (H5Sclose(sid) < 0) ret_val = -1; - if(did > 0) - if(H5Dclose(did) < 0) + if (did > 0) + if (H5Dclose(did) < 0) ret_val = -1; return ret_val; } /* end H5TBdelete_record() */ /*------------------------------------------------------------------------- -* Function: H5TBinsert_record -* -* Purpose: Inserts records into middle of table ("pushing down" all the records after it) -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 26, 2001 -* -* Comments: Uses memory offsets -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBinsert_record(hid_t loc_id, - const char *dset_name, - hsize_t start, - hsize_t nrecords, - size_t type_size, - const size_t *field_offset, - const size_t *field_sizes, - void *buf) + * Function: H5TBinsert_record + * + * Purpose: Inserts records into middle of table ("pushing down" all the records after it) + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: November 26, 2001 + * + * Comments: Uses memory offsets + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBinsert_record(hid_t loc_id, const char *dset_name, hsize_t start, hsize_t nrecords, size_t type_size, + const size_t *field_offset, const size_t *field_sizes, void *buf) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t mem_type_id = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; - hsize_t nfields; - hsize_t ntotal_records; - hsize_t read_nrecords; - hsize_t count[1]; - hsize_t offset[1]; - hsize_t dims[1]; - hsize_t mem_dims[1]; + hid_t did = H5I_BADID; + hid_t tid = H5I_BADID; + hid_t mem_type_id = H5I_BADID; + hid_t sid = H5I_BADID; + hid_t m_sid = H5I_BADID; + hsize_t nfields; + hsize_t ntotal_records; + hsize_t read_nrecords; + hsize_t count[1]; + hsize_t offset[1]; + hsize_t dims[1]; + hsize_t mem_dims[1]; unsigned char *tmp_buf = NULL; - herr_t ret_val = -1; + herr_t ret_val = -1; /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; /*------------------------------------------------------------------------- - * read the records after the inserted one(s) - *------------------------------------------------------------------------- - */ + * read the records after the inserted one(s) + *------------------------------------------------------------------------- + */ /* get the dimensions */ - if(H5TBget_table_info(loc_id, dset_name, &nfields, &ntotal_records) < 0) + if (H5TBget_table_info(loc_id, dset_name, &nfields, &ntotal_records) < 0) goto out; /* open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get the datatype */ - if((tid = H5Dget_type(did)) < 0) + if ((tid = H5Dget_type(did)) < 0) goto out; /* create the memory data type. */ - if((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, tid)) < 0) + if ((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, tid)) < 0) goto out; read_nrecords = ntotal_records - start; - if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t) read_nrecords, type_size))) + if (NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)read_nrecords, type_size))) goto out; /* read the records after the inserted one(s) */ - if(H5TBread_records(loc_id, dset_name, start, read_nrecords, type_size, field_offset, field_sizes, tmp_buf) < 0) + if (H5TBread_records(loc_id, dset_name, start, read_nrecords, type_size, field_offset, field_sizes, + tmp_buf) < 0) goto out; /* extend the dataset */ dims[0] = ntotal_records + nrecords; - if(H5Dset_extent(did, dims) < 0) + if (H5Dset_extent(did, dims) < 0) goto out; /*------------------------------------------------------------------------- - * write the inserted records - *------------------------------------------------------------------------- - */ + * write the inserted records + *------------------------------------------------------------------------- + */ /* create a simple memory data space */ mem_dims[0] = nrecords; - if((m_sid = H5Screate_simple(1, mem_dims, NULL)) < 0) + if ((m_sid = H5Screate_simple(1, mem_dims, NULL)) < 0) goto out; /* get the file data space */ - if((sid = H5Dget_space(did)) < 0) + if ((sid = H5Dget_space(did)) < 0) goto out; /* define a hyperslab in the dataset to write the new data */ offset[0] = start; count[0] = nrecords; - if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) + if (H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) goto out; - if(H5Dwrite(did, mem_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0) + if (H5Dwrite(did, mem_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0) goto out; /* terminate access to the dataspace */ - if(H5Sclose(m_sid) < 0) + if (H5Sclose(m_sid) < 0) goto out; m_sid = H5I_BADID; - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; sid = H5I_BADID; /*------------------------------------------------------------------------- - * write the "pushed down" records - *------------------------------------------------------------------------- - */ + * write the "pushed down" records + *------------------------------------------------------------------------- + */ /* create a simple memory data space */ mem_dims[0] = read_nrecords; - if((m_sid = H5Screate_simple(1, mem_dims, NULL)) < 0) + if ((m_sid = H5Screate_simple(1, mem_dims, NULL)) < 0) goto out; /* get the file data space */ - if((sid = H5Dget_space(did)) < 0) + if ((sid = H5Dget_space(did)) < 0) goto out; /* define a hyperslab in the dataset to write the new data */ offset[0] = start + nrecords; count[0] = read_nrecords; - if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) + if (H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) goto out; - if(H5Dwrite(did, mem_type_id, m_sid, sid, H5P_DEFAULT, tmp_buf) < 0) + if (H5Dwrite(did, mem_type_id, m_sid, sid, H5P_DEFAULT, tmp_buf) < 0) goto out; ret_val = 0; out: - if(tmp_buf) + if (tmp_buf) HDfree(tmp_buf); - if(sid > 0) - if(H5Sclose(sid) < 0) + if (sid > 0) + if (H5Sclose(sid) < 0) ret_val = -1; - if(m_sid > 0) - if(H5Sclose(m_sid) < 0) + if (m_sid > 0) + if (H5Sclose(m_sid) < 0) ret_val = -1; - if(mem_type_id > 0) - if(H5Tclose(mem_type_id) < 0) + if (mem_type_id > 0) + if (H5Tclose(mem_type_id) < 0) ret_val = -1; - if(tid > 0) - if(H5Tclose(tid) < 0) + if (tid > 0) + if (H5Tclose(tid) < 0) ret_val = -1; - if(did > 0) - if(H5Dclose(did) < 0) + if (did > 0) + if (H5Dclose(did) < 0) ret_val = -1; return ret_val; } /* end H5TBinsert_record() */ /*------------------------------------------------------------------------- -* Function: H5TBadd_records_from -* -* Purpose: Add records from first table to second table -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: December 5, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBadd_records_from(hid_t loc_id, - const char *dset_name1, - hsize_t start1, - hsize_t nrecords, - const char *dset_name2, - hsize_t start2) + * Function: H5TBadd_records_from + * + * Purpose: Add records from first table to second table + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: December 5, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBadd_records_from(hid_t loc_id, const char *dset_name1, hsize_t start1, hsize_t nrecords, + const char *dset_name2, hsize_t start2) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; - hsize_t count[1]; - hsize_t offset[1]; - hsize_t mem_size[1]; - hsize_t nfields; - hsize_t ntotal_records; - size_t type_size1; - size_t src_size; - size_t *src_offset = NULL; - size_t *src_sizes = NULL; - unsigned char *tmp_buf = NULL; - herr_t ret_val = -1; + hid_t did = H5I_BADID; + hid_t tid = H5I_BADID; + hid_t sid = H5I_BADID; + hid_t m_sid = H5I_BADID; + hsize_t count[1]; + hsize_t offset[1]; + hsize_t mem_size[1]; + hsize_t nfields; + hsize_t ntotal_records; + size_t type_size1; + size_t src_size; + size_t * src_offset = NULL; + size_t * src_sizes = NULL; + unsigned char *tmp_buf = NULL; + herr_t ret_val = -1; /* check the arguments */ - if (dset_name1 == NULL) - goto out; - if (dset_name2 == NULL) - goto out; + if (dset_name1 == NULL) + goto out; + if (dset_name2 == NULL) + goto out; /*------------------------------------------------------------------------- - * first we get information about type size and offsets on disk - *------------------------------------------------------------------------- - */ + * first we get information about type size and offsets on disk + *------------------------------------------------------------------------- + */ /* get the number of records and fields */ - if(H5TBget_table_info(loc_id, dset_name1, &nfields, &ntotal_records) < 0) + if (H5TBget_table_info(loc_id, dset_name1, &nfields, &ntotal_records) < 0) goto out; - if(NULL == (src_offset = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t)))) + if (NULL == (src_offset = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t)))) goto out; - if(NULL == (src_sizes = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t)))) + if (NULL == (src_sizes = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t)))) goto out; /* get field info */ - if(H5TBget_field_info(loc_id, dset_name1, NULL, src_sizes, src_offset, &src_size) < 0) + if (H5TBget_field_info(loc_id, dset_name1, NULL, src_sizes, src_offset, &src_size) < 0) goto out; /*------------------------------------------------------------------------- - * Get information about the first table and read it - *------------------------------------------------------------------------- - */ + * Get information about the first table and read it + *------------------------------------------------------------------------- + */ /* open the 1st dataset. */ - if((did = H5Dopen2(loc_id, dset_name1, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name1, H5P_DEFAULT)) < 0) goto out; /* get the datatype */ - if((tid = H5Dget_type(did)) < 0) + if ((tid = H5Dget_type(did)) < 0) goto out; /* get the dataspace handle */ - if((sid = H5Dget_space(did)) < 0) + if ((sid = H5Dget_space(did)) < 0) goto out; /* get the size of the datatype */ - if(0 == (type_size1 = H5Tget_size(tid))) + if (0 == (type_size1 = H5Tget_size(tid))) goto out; - if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, type_size1))) + if (NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, type_size1))) goto out; /* define a hyperslab in the dataset of the size of the records */ offset[0] = start1; count[0] = nrecords; - if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) + if (H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) goto out; /* create a memory dataspace handle */ mem_size[0] = count[0]; - if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) + if ((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) goto out; - if(H5Dread(did, tid, m_sid, sid, H5P_DEFAULT, tmp_buf) < 0) + if (H5Dread(did, tid, m_sid, sid, H5P_DEFAULT, tmp_buf) < 0) goto out; /*------------------------------------------------------------------------- - * add to the second table - *------------------------------------------------------------------------- - */ - if(H5TBinsert_record(loc_id, dset_name2, start2, nrecords, src_size, src_offset, src_sizes, tmp_buf) < 0) + * add to the second table + *------------------------------------------------------------------------- + */ + if (H5TBinsert_record(loc_id, dset_name2, start2, nrecords, src_size, src_offset, src_sizes, tmp_buf) < 0) goto out; ret_val = 0; out: - if(tmp_buf) + if (tmp_buf) HDfree(tmp_buf); - if(src_offset) + if (src_offset) HDfree(src_offset); - if(src_sizes) + if (src_sizes) HDfree(src_sizes); - if(tid > 0) - if(H5Tclose(tid) < 0) + if (tid > 0) + if (H5Tclose(tid) < 0) ret_val = -1; - if(sid > 0) - if(H5Sclose(sid) < 0) + if (sid > 0) + if (H5Sclose(sid) < 0) ret_val = -1; - if(m_sid > 0) - if(H5Sclose(m_sid) < 0) + if (m_sid > 0) + if (H5Sclose(m_sid) < 0) ret_val = -1; - if(did > 0) - if(H5Dclose(did) < 0) + if (did > 0) + if (H5Dclose(did) < 0) ret_val = -1; return ret_val; } /* end H5TBadd_records_from() */ /*------------------------------------------------------------------------- -* Function: H5TBcombine_tables -* -* Purpose: Combine records from two tables into a third -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: December 10, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBcombine_tables(hid_t loc_id1, - const char *dset_name1, - hid_t loc_id2, - const char *dset_name2, - const char *dset_name3) + * Function: H5TBcombine_tables + * + * Purpose: Combine records from two tables into a third + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: December 10, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBcombine_tables(hid_t loc_id1, const char *dset_name1, hid_t loc_id2, const char *dset_name2, + const char *dset_name3) { /* identifiers for the 1st dataset. */ - hid_t did_1 = H5I_BADID; - hid_t tid_1 = H5I_BADID; - hid_t sid_1 = H5I_BADID; - hid_t pid_1 = H5I_BADID; + hid_t did_1 = H5I_BADID; + hid_t tid_1 = H5I_BADID; + hid_t sid_1 = H5I_BADID; + hid_t pid_1 = H5I_BADID; /* identifiers for the 2nd dataset. */ - hid_t did_2 = H5I_BADID; - hid_t tid_2 = H5I_BADID; - hid_t sid_2 = H5I_BADID; - hid_t pid_2 = H5I_BADID; + hid_t did_2 = H5I_BADID; + hid_t tid_2 = H5I_BADID; + hid_t sid_2 = H5I_BADID; + hid_t pid_2 = H5I_BADID; /* identifiers for the 3rd dataset. */ - hid_t did_3 = H5I_BADID; - hid_t tid_3 = H5I_BADID; - hid_t sid_3 = H5I_BADID; - hid_t pid_3 = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; - hid_t member_type_id = H5I_BADID; - hid_t attr_id = H5I_BADID; - hsize_t count[1]; - hsize_t offset[1]; - hsize_t mem_size[1]; - hsize_t nfields; - hsize_t nrecords; - hsize_t dims[1]; - hsize_t maxdims[1] = {H5S_UNLIMITED}; - hsize_t i; - size_t type_size; - size_t member_offset; - size_t src_size; - size_t *src_offset = NULL; - size_t *src_sizes = NULL; - char attr_name[255]; - unsigned char *tmp_buf = NULL; + hid_t did_3 = H5I_BADID; + hid_t tid_3 = H5I_BADID; + hid_t sid_3 = H5I_BADID; + hid_t pid_3 = H5I_BADID; + hid_t sid = H5I_BADID; + hid_t m_sid = H5I_BADID; + hid_t member_type_id = H5I_BADID; + hid_t attr_id = H5I_BADID; + hsize_t count[1]; + hsize_t offset[1]; + hsize_t mem_size[1]; + hsize_t nfields; + hsize_t nrecords; + hsize_t dims[1]; + hsize_t maxdims[1] = {H5S_UNLIMITED}; + hsize_t i; + size_t type_size; + size_t member_offset; + size_t src_size; + size_t * src_offset = NULL; + size_t * src_sizes = NULL; + char attr_name[255]; + unsigned char *tmp_buf = NULL; unsigned char *tmp_fill_buf = NULL; - htri_t has_fill; - herr_t ret_val = -1; + htri_t has_fill; + herr_t ret_val = -1; /* check the arguments */ - if (dset_name1 == NULL) - goto out; - if (dset_name2 == NULL) - goto out; - if (dset_name3 == NULL) - goto out; + if (dset_name1 == NULL) + goto out; + if (dset_name2 == NULL) + goto out; + if (dset_name3 == NULL) + goto out; /*------------------------------------------------------------------------- - * first we get information about type size and offsets on disk - *------------------------------------------------------------------------- - */ + * first we get information about type size and offsets on disk + *------------------------------------------------------------------------- + */ /* get the number of records and fields */ - if(H5TBget_table_info(loc_id1, dset_name1, &nfields, &nrecords) < 0) + if (H5TBget_table_info(loc_id1, dset_name1, &nfields, &nrecords) < 0) goto out; - if(NULL == (src_offset = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t)))) + if (NULL == (src_offset = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t)))) goto out; - if(NULL == (src_sizes = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t)))) + if (NULL == (src_sizes = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t)))) goto out; /* get field info */ - if(H5TBget_field_info(loc_id1, dset_name1, NULL, src_sizes, src_offset, &src_size) < 0) + if (H5TBget_field_info(loc_id1, dset_name1, NULL, src_sizes, src_offset, &src_size) < 0) goto out; /*------------------------------------------------------------------------- - * get information about the first table - *------------------------------------------------------------------------- - */ + * get information about the first table + *------------------------------------------------------------------------- + */ /* open the 1st dataset. */ - if((did_1 = H5Dopen2(loc_id1, dset_name1, H5P_DEFAULT)) < 0) + if ((did_1 = H5Dopen2(loc_id1, dset_name1, H5P_DEFAULT)) < 0) goto out; /* get the datatype */ - if((tid_1 = H5Dget_type(did_1)) < 0) + if ((tid_1 = H5Dget_type(did_1)) < 0) goto out; /* get the dataspace handle */ - if((sid_1 = H5Dget_space(did_1)) < 0) + if ((sid_1 = H5Dget_space(did_1)) < 0) goto out; /* get creation properties list */ - if((pid_1 = H5Dget_create_plist(did_1)) < 0) + if ((pid_1 = H5Dget_create_plist(did_1)) < 0) goto out; /* get the dimensions */ - if(H5TBget_table_info(loc_id1, dset_name1, &nfields, &nrecords) < 0) + if (H5TBget_table_info(loc_id1, dset_name1, &nfields, &nrecords) < 0) goto out; /*------------------------------------------------------------------------- - * make the merged table with no data originally - *------------------------------------------------------------------------- - */ + * make the merged table with no data originally + *------------------------------------------------------------------------- + */ /* clone the property list */ - if((pid_3 = H5Pcopy(pid_1)) < 0) + if ((pid_3 = H5Pcopy(pid_1)) < 0) goto out; /* clone the type id */ - if((tid_3 = H5Tcopy(tid_1)) < 0) + if ((tid_3 = H5Tcopy(tid_1)) < 0) goto out; /*------------------------------------------------------------------------- - * here we do not clone the file space from the 1st dataset, because we want to create - * an empty table. Instead we create a new dataspace with zero records and expandable. - *------------------------------------------------------------------------- - */ + * here we do not clone the file space from the 1st dataset, because we want to create + * an empty table. Instead we create a new dataspace with zero records and expandable. + *------------------------------------------------------------------------- + */ dims[0] = 0; /* create a simple data space with unlimited size */ - if((sid_3 = H5Screate_simple(1, dims, maxdims)) < 0) + if ((sid_3 = H5Screate_simple(1, dims, maxdims)) < 0) goto out; /* create the dataset */ - if((did_3 = H5Dcreate2(loc_id1, dset_name3, tid_3, sid_3, H5P_DEFAULT, pid_3, H5P_DEFAULT)) < 0) + if ((did_3 = H5Dcreate2(loc_id1, dset_name3, tid_3, sid_3, H5P_DEFAULT, pid_3, H5P_DEFAULT)) < 0) goto out; /*------------------------------------------------------------------------- - * attach the conforming table attributes - *------------------------------------------------------------------------- - */ - if(H5TB_attach_attributes("Merge table", loc_id1, dset_name3, nfields, tid_3) < 0) + * attach the conforming table attributes + *------------------------------------------------------------------------- + */ + if (H5TB_attach_attributes("Merge table", loc_id1, dset_name3, nfields, tid_3) < 0) goto out; /*------------------------------------------------------------------------- - * get attributes - *------------------------------------------------------------------------- - */ - if(0 == (type_size = H5Tget_size(tid_3))) + * get attributes + *------------------------------------------------------------------------- + */ + if (0 == (type_size = H5Tget_size(tid_3))) goto out; /* alloc fill value attribute buffer */ - if(NULL == (tmp_fill_buf = (unsigned char *)HDmalloc(type_size))) + if (NULL == (tmp_fill_buf = (unsigned char *)HDmalloc(type_size))) goto out; /* get the fill value attributes */ - if((has_fill = H5TBAget_fill(loc_id1, dset_name1, did_1, tmp_fill_buf)) < 0) + if ((has_fill = H5TBAget_fill(loc_id1, dset_name1, did_1, tmp_fill_buf)) < 0) goto out; /*------------------------------------------------------------------------- - * attach the fill attributes from previous table - *------------------------------------------------------------------------- - */ - if(has_fill) { - if((sid = H5Screate(H5S_SCALAR)) < 0) + * attach the fill attributes from previous table + *------------------------------------------------------------------------- + */ + if (has_fill) { + if ((sid = H5Screate(H5S_SCALAR)) < 0) goto out; - for(i = 0; i < nfields; i++) { + for (i = 0; i < nfields; i++) { /* get the member type */ - if((member_type_id = H5Tget_member_type(tid_3, (unsigned)i)) < 0) + if ((member_type_id = H5Tget_member_type(tid_3, (unsigned)i)) < 0) goto out; /* get the member offset */ @@ -1872,258 +1802,254 @@ herr_t H5TBcombine_tables(hid_t loc_id1, HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)i); - if((attr_id = H5Acreate2(did_3, attr_name, member_type_id, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((attr_id = H5Acreate2(did_3, attr_name, member_type_id, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; - if(H5Awrite(attr_id, member_type_id, tmp_fill_buf + member_offset) < 0) + if (H5Awrite(attr_id, member_type_id, tmp_fill_buf + member_offset) < 0) goto out; - if(H5Aclose(attr_id) < 0) + if (H5Aclose(attr_id) < 0) goto out; attr_id = H5I_BADID; - if(H5Tclose(member_type_id) < 0) + if (H5Tclose(member_type_id) < 0) goto out; member_type_id = H5I_BADID; } /* end for */ /* close data space. */ - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; sid = H5I_BADID; } /* end if */ /*------------------------------------------------------------------------- - * read data from 1st table - *------------------------------------------------------------------------- - */ - if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, type_size))) + * read data from 1st table + *------------------------------------------------------------------------- + */ + if (NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, type_size))) goto out; /* define a hyperslab in the dataset of the size of the records */ offset[0] = 0; count[0] = nrecords; - if(H5Sselect_hyperslab(sid_1, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) + if (H5Sselect_hyperslab(sid_1, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) goto out; /* create a memory dataspace handle */ mem_size[0] = count[0]; - if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) + if ((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) goto out; - if(H5Dread(did_1, tid_1, m_sid, sid_1, H5P_DEFAULT, tmp_buf) < 0) + if (H5Dread(did_1, tid_1, m_sid, sid_1, H5P_DEFAULT, tmp_buf) < 0) goto out; /*------------------------------------------------------------------------- - * save data from 1st table into new table - *------------------------------------------------------------------------- - */ + * save data from 1st table into new table + *------------------------------------------------------------------------- + */ /* append the records to the new table */ - if(H5TBappend_records(loc_id1, dset_name3, nrecords, src_size, src_offset, src_sizes, tmp_buf) < 0) + if (H5TBappend_records(loc_id1, dset_name3, nrecords, src_size, src_offset, src_sizes, tmp_buf) < 0) goto out; /*------------------------------------------------------------------------- - * release temporary resources - *------------------------------------------------------------------------- - */ - if(H5Sclose(m_sid) < 0) + * release temporary resources + *------------------------------------------------------------------------- + */ + if (H5Sclose(m_sid) < 0) goto out; m_sid = H5I_BADID; HDfree(tmp_buf); tmp_buf = NULL; /*------------------------------------------------------------------------- - * get information about the 2nd table - *------------------------------------------------------------------------- - */ + * get information about the 2nd table + *------------------------------------------------------------------------- + */ /* open the dataset. */ - if((did_2 = H5Dopen2(loc_id2, dset_name2, H5P_DEFAULT)) < 0) + if ((did_2 = H5Dopen2(loc_id2, dset_name2, H5P_DEFAULT)) < 0) goto out; /* get the datatype */ - if((tid_2 = H5Dget_type(did_2)) < 0) + if ((tid_2 = H5Dget_type(did_2)) < 0) goto out; /* get the dataspace handle */ - if((sid_2 = H5Dget_space(did_2)) < 0) + if ((sid_2 = H5Dget_space(did_2)) < 0) goto out; /* get the property list handle */ - if((pid_2 = H5Dget_create_plist(did_2)) < 0) + if ((pid_2 = H5Dget_create_plist(did_2)) < 0) goto out; /* get the dimensions */ - if(H5TBget_table_info(loc_id2, dset_name2, &nfields, &nrecords) < 0) + if (H5TBget_table_info(loc_id2, dset_name2, &nfields, &nrecords) < 0) goto out; /*------------------------------------------------------------------------- - * read data from 2nd table - *------------------------------------------------------------------------- - */ + * read data from 2nd table + *------------------------------------------------------------------------- + */ - if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, type_size))) + if (NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, type_size))) goto out; /* define a hyperslab in the dataset of the size of the records */ offset[0] = 0; count[0] = nrecords; - if(H5Sselect_hyperslab(sid_2, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) + if (H5Sselect_hyperslab(sid_2, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) goto out; /* create a memory dataspace handle */ mem_size[0] = count[0]; - if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) + if ((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) goto out; - if(H5Dread(did_2, tid_2, m_sid, sid_2, H5P_DEFAULT, tmp_buf) < 0) + if (H5Dread(did_2, tid_2, m_sid, sid_2, H5P_DEFAULT, tmp_buf) < 0) goto out; /*------------------------------------------------------------------------- - * save data from 2nd table into new table - *------------------------------------------------------------------------- - */ + * save data from 2nd table into new table + *------------------------------------------------------------------------- + */ /* append the records to the new table */ - if(H5TBappend_records(loc_id1, dset_name3, nrecords, src_size, src_offset, src_sizes, tmp_buf) < 0) + if (H5TBappend_records(loc_id1, dset_name3, nrecords, src_size, src_offset, src_sizes, tmp_buf) < 0) goto out; ret_val = 0; out: - if(tmp_buf) + if (tmp_buf) HDfree(tmp_buf); - if(tmp_fill_buf) + if (tmp_fill_buf) HDfree(tmp_fill_buf); - if(src_offset) + if (src_offset) HDfree(src_offset); - if(src_sizes) + if (src_sizes) HDfree(src_sizes); - if(member_type_id > 0) - if(H5Tclose(member_type_id) < 0) + if (member_type_id > 0) + if (H5Tclose(member_type_id) < 0) ret_val = -1; - if(attr_id > 0) - if(H5Aclose(attr_id) < 0) + if (attr_id > 0) + if (H5Aclose(attr_id) < 0) ret_val = -1; - if(sid > 0) - if(H5Sclose(sid) < 0) + if (sid > 0) + if (H5Sclose(sid) < 0) ret_val = -1; - if(m_sid > 0) - if(H5Sclose(m_sid) < 0) + if (m_sid > 0) + if (H5Sclose(m_sid) < 0) ret_val = -1; - if(sid_1 > 0) - if(H5Sclose(sid_1) < 0) + if (sid_1 > 0) + if (H5Sclose(sid_1) < 0) ret_val = -1; - if(tid_1 > 0) - if(H5Tclose(tid_1) < 0) + if (tid_1 > 0) + if (H5Tclose(tid_1) < 0) ret_val = -1; - if(pid_1 > 0) - if(H5Pclose(pid_1) < 0) + if (pid_1 > 0) + if (H5Pclose(pid_1) < 0) ret_val = -1; - if(did_1 > 0) - if(H5Dclose(did_1) < 0) + if (did_1 > 0) + if (H5Dclose(did_1) < 0) ret_val = -1; - if(sid_2 > 0) - if(H5Sclose(sid_2) < 0) + if (sid_2 > 0) + if (H5Sclose(sid_2) < 0) ret_val = -1; - if(tid_2 > 0) - if(H5Tclose(tid_2) < 0) + if (tid_2 > 0) + if (H5Tclose(tid_2) < 0) ret_val = -1; - if(pid_2 > 0) - if(H5Pclose(pid_2) < 0) + if (pid_2 > 0) + if (H5Pclose(pid_2) < 0) ret_val = -1; - if(did_2 > 0) - if(H5Dclose(did_2) < 0) + if (did_2 > 0) + if (H5Dclose(did_2) < 0) ret_val = -1; - if(sid_3 > 0) - if(H5Sclose(sid_3) < 0) + if (sid_3 > 0) + if (H5Sclose(sid_3) < 0) ret_val = -1; - if(tid_3 > 0) - if(H5Tclose(tid_3) < 0) + if (tid_3 > 0) + if (H5Tclose(tid_3) < 0) ret_val = -1; - if(pid_3 > 0) - if(H5Pclose(pid_3) < 0) + if (pid_3 > 0) + if (H5Pclose(pid_3) < 0) ret_val = -1; - if(did_3 > 0) - if(H5Dclose(did_3) < 0) + if (did_3 > 0) + if (H5Dclose(did_3) < 0) ret_val = -1; return ret_val; } /* end H5TBcombine_tables() */ /*------------------------------------------------------------------------- -* Function: H5TBinsert_field -* -* Purpose: Inserts a field -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: January 30, 2002 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBinsert_field(hid_t loc_id, - const char *dset_name, - const char *field_name, - hid_t field_type, - hsize_t position, - const void *fill_data, - const void *buf) + * Function: H5TBinsert_field + * + * Purpose: Inserts a field + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: January 30, 2002 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBinsert_field(hid_t loc_id, const char *dset_name, const char *field_name, hid_t field_type, + hsize_t position, const void *fill_data, const void *buf) { /* identifiers for the 1st, original dataset */ - hid_t did_1 = H5I_BADID; - hid_t tid_1 = H5I_BADID; - hid_t sid_1 = H5I_BADID; - hid_t pid_1 = H5I_BADID; - hid_t msid_1 = H5I_BADID; + hid_t did_1 = H5I_BADID; + hid_t tid_1 = H5I_BADID; + hid_t sid_1 = H5I_BADID; + hid_t pid_1 = H5I_BADID; + hid_t msid_1 = H5I_BADID; /* identifiers for the 2nd, new dataset */ - hid_t did_2 = H5I_BADID; - hid_t tid_2 = H5I_BADID; - hid_t sid_2 = H5I_BADID; - hid_t pid_2 = H5I_BADID; - hid_t msid_2 = H5I_BADID; + hid_t did_2 = H5I_BADID; + hid_t tid_2 = H5I_BADID; + hid_t sid_2 = H5I_BADID; + hid_t pid_2 = H5I_BADID; + hid_t msid_2 = H5I_BADID; /* identifiers for the 3rd, final dataset */ - hid_t did_3 = H5I_BADID; - hid_t tid_3 = H5I_BADID; - hid_t sid_3 = H5I_BADID; - hid_t member_type_id = H5I_BADID; - hid_t write_type_id = H5I_BADID; - hid_t preserve_id = H5I_BADID; - hid_t attr_id = H5I_BADID; - size_t member_size; - size_t new_member_size = 0; - size_t total_size; - size_t curr_offset; - hsize_t nfields; - hsize_t nrecords; - hsize_t dims_chunk[1]; - hsize_t dims[1]; - hsize_t maxdims[1] = { H5S_UNLIMITED }; - hsize_t count[1]; - hsize_t offset[1]; - hsize_t mem_size[1]; - hsize_t i; - char table_title[255]; - char attr_name[255]; - char *member_name = NULL; - unsigned char *tmp_buf = NULL; + hid_t did_3 = H5I_BADID; + hid_t tid_3 = H5I_BADID; + hid_t sid_3 = H5I_BADID; + hid_t member_type_id = H5I_BADID; + hid_t write_type_id = H5I_BADID; + hid_t preserve_id = H5I_BADID; + hid_t attr_id = H5I_BADID; + size_t member_size; + size_t new_member_size = 0; + size_t total_size; + size_t curr_offset; + hsize_t nfields; + hsize_t nrecords; + hsize_t dims_chunk[1]; + hsize_t dims[1]; + hsize_t maxdims[1] = {H5S_UNLIMITED}; + hsize_t count[1]; + hsize_t offset[1]; + hsize_t mem_size[1]; + hsize_t i; + char table_title[255]; + char attr_name[255]; + char * member_name = NULL; + unsigned char *tmp_buf = NULL; unsigned char *tmp_fill_buf = NULL; - hbool_t inserted; - herr_t ret_val = -1; + hbool_t inserted; + herr_t ret_val = -1; /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; - if (field_name == NULL) + if (field_name == NULL) goto out; /* get the number of records and fields */ - if(H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0) + if (H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0) goto out; /*------------------------------------------------------------------------- @@ -2132,27 +2058,27 @@ herr_t H5TBinsert_field(hid_t loc_id, */ /* open the dataset. */ - if((did_1 = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did_1 = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get creation properties list */ - if((pid_1 = H5Dget_create_plist(did_1)) < 0) + if ((pid_1 = H5Dget_create_plist(did_1)) < 0) goto out; /* get the datatype */ - if((tid_1 = H5Dget_type(did_1)) < 0) + if ((tid_1 = H5Dget_type(did_1)) < 0) goto out; /* get the size of the datatype */ - if(0 == (total_size = H5Tget_size(tid_1))) + if (0 == (total_size = H5Tget_size(tid_1))) goto out; /* get the dataspace handle */ - if((sid_1 = H5Dget_space(did_1)) < 0) + if ((sid_1 = H5Dget_space(did_1)) < 0) goto out; /* get dimension */ - if(H5Sget_simple_extent_dims(sid_1, dims, NULL) < 0) + if (H5Sget_simple_extent_dims(sid_1, dims, NULL) < 0) goto out; /*------------------------------------------------------------------------- @@ -2161,15 +2087,15 @@ herr_t H5TBinsert_field(hid_t loc_id, */ /* get the table title */ - if((H5TBAget_title(did_1, table_title)) < 0) + if ((H5TBAget_title(did_1, table_title)) < 0) goto out; /* alloc fill value attribute buffer */ - if(NULL == (tmp_fill_buf = (unsigned char *)HDmalloc(total_size))) + if (NULL == (tmp_fill_buf = (unsigned char *)HDmalloc(total_size))) goto out; /* get the fill value attributes */ - if((H5TBAget_fill(loc_id, dset_name, did_1, tmp_fill_buf)) < 0) + if ((H5TBAget_fill(loc_id, dset_name, did_1, tmp_fill_buf)) < 0) goto out; /*------------------------------------------------------------------------- @@ -2178,31 +2104,31 @@ herr_t H5TBinsert_field(hid_t loc_id, */ /* get the new member size */ - if(0 == (member_size = H5Tget_size(field_type))) + if (0 == (member_size = H5Tget_size(field_type))) goto out; /* create the data type. */ - if((tid_2 = H5Tcreate(H5T_COMPOUND, (size_t)(total_size + member_size))) < 0) + if ((tid_2 = H5Tcreate(H5T_COMPOUND, (size_t)(total_size + member_size))) < 0) goto out; curr_offset = 0; inserted = FALSE; /* insert the old fields, counting with the new one */ - for(i = 0; i < nfields + 1; i++) { - hsize_t idx; + for (i = 0; i < nfields + 1; i++) { + hsize_t idx; idx = i; - if(inserted) + if (inserted) idx = i - 1; - if(i == position) { + if (i == position) { /* get the new member size */ - if(0 == (new_member_size = H5Tget_size(field_type))) + if (0 == (new_member_size = H5Tget_size(field_type))) goto out; /* insert the new field type */ - if(H5Tinsert(tid_2, field_name, curr_offset, field_type) < 0) + if (H5Tinsert(tid_2, field_name, curr_offset, field_type) < 0) goto out; curr_offset += new_member_size; @@ -2211,19 +2137,19 @@ herr_t H5TBinsert_field(hid_t loc_id, } /* end if */ else { /* get the member name */ - if(NULL == (member_name = H5Tget_member_name(tid_1, (unsigned)idx))) + if (NULL == (member_name = H5Tget_member_name(tid_1, (unsigned)idx))) goto out; /* get the member type */ - if((member_type_id = H5Tget_member_type(tid_1, (unsigned)idx)) < 0) + if ((member_type_id = H5Tget_member_type(tid_1, (unsigned)idx)) < 0) goto out; /* get the member size */ - if(0 == (member_size = H5Tget_size(member_type_id))) + if (0 == (member_size = H5Tget_size(member_type_id))) goto out; /* insert it into the new type */ - if(H5Tinsert(tid_2, member_name, curr_offset, member_type_id) < 0) + if (H5Tinsert(tid_2, member_name, curr_offset, member_type_id) < 0) goto out; curr_offset += member_size; @@ -2232,11 +2158,11 @@ herr_t H5TBinsert_field(hid_t loc_id, member_name = NULL; /* close the member type */ - if(H5Tclose(member_type_id) < 0) + if (H5Tclose(member_type_id) < 0) goto out; member_type_id = H5I_BADID; } /* end else */ - } /* end for */ + } /* end for */ /*------------------------------------------------------------------------- * create a new temporary dataset @@ -2244,21 +2170,21 @@ herr_t H5TBinsert_field(hid_t loc_id, */ /* retrieve the size of chunk */ - if(H5Pget_chunk(pid_1, 1, dims_chunk) < 0) + if (H5Pget_chunk(pid_1, 1, dims_chunk) < 0) goto out; /* create a new simple data space with unlimited size, using the dimension */ - if((sid_2 = H5Screate_simple(1, dims, maxdims)) < 0) + if ((sid_2 = H5Screate_simple(1, dims, maxdims)) < 0) goto out; /* modify dataset creation properties, i.e. enable chunking */ - if((pid_2 = H5Pcreate(H5P_DATASET_CREATE)) < 0) + if ((pid_2 = H5Pcreate(H5P_DATASET_CREATE)) < 0) goto out; - if(H5Pset_chunk(pid_2, 1, dims_chunk) < 0) + if (H5Pset_chunk(pid_2, 1, dims_chunk) < 0) goto out; /* create the dataset. */ - if((did_2 = H5Dcreate2(loc_id, "new", tid_2, sid_2, H5P_DEFAULT, pid_2, H5P_DEFAULT)) < 0) + if ((did_2 = H5Dcreate2(loc_id, "new", tid_2, sid_2, H5P_DEFAULT, pid_2, H5P_DEFAULT)) < 0) goto out; /*------------------------------------------------------------------------- @@ -2266,21 +2192,21 @@ herr_t H5TBinsert_field(hid_t loc_id, *------------------------------------------------------------------------- */ - if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, (size_t)total_size))) + if (NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, (size_t)total_size))) goto out; /* define a hyperslab in the dataset of the size of the records */ offset[0] = 0; count[0] = nrecords; - if(H5Sselect_hyperslab(sid_1, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) + if (H5Sselect_hyperslab(sid_1, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) goto out; /* create a memory dataspace handle */ mem_size[0] = count[0]; - if((msid_1 = H5Screate_simple(1, mem_size, NULL)) < 0) + if ((msid_1 = H5Screate_simple(1, mem_size, NULL)) < 0) goto out; - if(H5Dread(did_1, tid_1, msid_1, H5S_ALL, H5P_DEFAULT, tmp_buf) < 0) + if (H5Dread(did_1, tid_1, msid_1, H5S_ALL, H5P_DEFAULT, tmp_buf) < 0) goto out; /*------------------------------------------------------------------------- @@ -2289,7 +2215,7 @@ herr_t H5TBinsert_field(hid_t loc_id, */ /* write */ - if(H5Dwrite(did_2, tid_1, msid_1, H5S_ALL, H5P_DEFAULT, tmp_buf) < 0) + if (H5Dwrite(did_2, tid_1, msid_1, H5S_ALL, H5P_DEFAULT, tmp_buf) < 0) goto out; /*------------------------------------------------------------------------- @@ -2298,27 +2224,27 @@ herr_t H5TBinsert_field(hid_t loc_id, */ /* create a write id */ - if((write_type_id = H5Tcreate(H5T_COMPOUND, (size_t)new_member_size)) < 0) + if ((write_type_id = H5Tcreate(H5T_COMPOUND, (size_t)new_member_size)) < 0) goto out; /* the field in the file is found by its name */ - if(H5Tinsert(write_type_id, field_name, (size_t)0, field_type) < 0) + if (H5Tinsert(write_type_id, field_name, (size_t)0, field_type) < 0) goto out; /* create xfer properties to preserve initialized data */ - if((preserve_id = H5Pcreate(H5P_DATASET_XFER)) < 0) + if ((preserve_id = H5Pcreate(H5P_DATASET_XFER)) < 0) goto out; - if(H5Pset_preserve(preserve_id, 1) < 0) + if (H5Pset_preserve(preserve_id, 1) < 0) goto out; /* only write if there is something to write */ - if(buf) { + if (buf) { /* create a memory dataspace handle */ - if((msid_2 = H5Screate_simple(1, mem_size, NULL)) < 0) + if ((msid_2 = H5Screate_simple(1, mem_size, NULL)) < 0) goto out; /* write */ - if(H5Dwrite(did_2, write_type_id, msid_2, sid_2, preserve_id, buf) < 0) + if (H5Dwrite(did_2, write_type_id, msid_2, sid_2, preserve_id, buf) < 0) goto out; } /* end if */ @@ -2326,14 +2252,14 @@ herr_t H5TBinsert_field(hid_t loc_id, * delete 1st table *------------------------------------------------------------------------- */ - if(H5Ldelete(loc_id, dset_name, H5P_DEFAULT) < 0) + if (H5Ldelete(loc_id, dset_name, H5P_DEFAULT) < 0) goto out; /*------------------------------------------------------------------------- * rename 2nd table *------------------------------------------------------------------------- */ - if(H5Lmove(loc_id, "new", H5L_SAME_LOC, dset_name, H5P_DEFAULT, H5P_DEFAULT) < 0) + if (H5Lmove(loc_id, "new", H5L_SAME_LOC, dset_name, H5P_DEFAULT, H5P_DEFAULT) < 0) goto out; /*------------------------------------------------------------------------- @@ -2342,33 +2268,33 @@ herr_t H5TBinsert_field(hid_t loc_id, */ /* get the number of records and fields */ - if(H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0) + if (H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0) goto out; /* open the dataset. */ - if((did_3 = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did_3 = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get the datatype */ - if((tid_3 = H5Dget_type(did_3)) < 0) + if ((tid_3 = H5Dget_type(did_3)) < 0) goto out; /* set the attributes */ - if(H5TB_attach_attributes(table_title, loc_id, dset_name, (hsize_t)nfields, tid_3) < 0) + if (H5TB_attach_attributes(table_title, loc_id, dset_name, (hsize_t)nfields, tid_3) < 0) goto out; /*------------------------------------------------------------------------- * attach the fill attributes from previous table *------------------------------------------------------------------------- */ - if((sid_3 = H5Screate(H5S_SCALAR)) < 0) + if ((sid_3 = H5Screate(H5S_SCALAR)) < 0) goto out; - for(i = 0; i < (nfields - 1); i++) { - size_t member_offset; + for (i = 0; i < (nfields - 1); i++) { + size_t member_offset; /* get the member type */ - if((member_type_id = H5Tget_member_type(tid_3, (unsigned)i)) < 0) + if ((member_type_id = H5Tget_member_type(tid_3, (unsigned)i)) < 0) goto out; /* get the member offset */ @@ -2376,18 +2302,18 @@ herr_t H5TBinsert_field(hid_t loc_id, HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)i); - if((attr_id = H5Acreate2(did_3, attr_name, member_type_id, sid_3, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((attr_id = H5Acreate2(did_3, attr_name, member_type_id, sid_3, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; - if(H5Awrite(attr_id, member_type_id, tmp_fill_buf + member_offset) < 0) + if (H5Awrite(attr_id, member_type_id, tmp_fill_buf + member_offset) < 0) goto out; - if(H5Aclose(attr_id) < 0) + if (H5Aclose(attr_id) < 0) goto out; attr_id = H5I_BADID; /* close the member type */ - if(H5Tclose(member_type_id) < 0) + if (H5Tclose(member_type_id) < 0) goto out; member_type_id = H5I_BADID; } /* end for */ @@ -2396,24 +2322,24 @@ herr_t H5TBinsert_field(hid_t loc_id, * attach the fill attribute from the new field, if present *------------------------------------------------------------------------- */ - if(fill_data) { + if (fill_data) { HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)(nfields - 1)); /* get the member type */ - if((member_type_id = H5Tget_member_type(tid_3, (unsigned)nfields - 1)) < 0) + if ((member_type_id = H5Tget_member_type(tid_3, (unsigned)nfields - 1)) < 0) goto out; - if((attr_id = H5Acreate2(did_3, attr_name, member_type_id, sid_3, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((attr_id = H5Acreate2(did_3, attr_name, member_type_id, sid_3, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; - if(H5Awrite(attr_id, member_type_id, fill_data) < 0) + if (H5Awrite(attr_id, member_type_id, fill_data) < 0) goto out; - if(H5Aclose(attr_id) < 0) + if (H5Aclose(attr_id) < 0) goto out; attr_id = H5I_BADID; - if(H5Tclose(member_type_id) < 0) + if (H5Tclose(member_type_id) < 0) goto out; member_type_id = H5I_BADID; } /* end fill_data */ @@ -2421,178 +2347,176 @@ herr_t H5TBinsert_field(hid_t loc_id, ret_val = 0; out: - if(member_name) + if (member_name) H5free_memory(member_name); - if(tmp_buf) + if (tmp_buf) HDfree(tmp_buf); - if(tmp_fill_buf) + if (tmp_fill_buf) HDfree(tmp_fill_buf); - if(preserve_id > 0) - if(H5Pclose(preserve_id) < 0) + if (preserve_id > 0) + if (H5Pclose(preserve_id) < 0) ret_val = -1; - if(msid_1 > 0) - if(H5Sclose(msid_1) < 0) + if (msid_1 > 0) + if (H5Sclose(msid_1) < 0) ret_val = -1; - if(tid_1 > 0) - if(H5Tclose(tid_1) < 0) + if (tid_1 > 0) + if (H5Tclose(tid_1) < 0) ret_val = -1; - if(pid_1 > 0) - if(H5Pclose(pid_1) < 0) + if (pid_1 > 0) + if (H5Pclose(pid_1) < 0) ret_val = -1; - if(sid_1 > 0) - if(H5Sclose(sid_1) < 0) + if (sid_1 > 0) + if (H5Sclose(sid_1) < 0) ret_val = -1; - if(did_1 > 0) - if(H5Dclose(did_1) < 0) + if (did_1 > 0) + if (H5Dclose(did_1) < 0) ret_val = -1; - if(msid_2 > 0) - if(H5Sclose(msid_2) < 0) + if (msid_2 > 0) + if (H5Sclose(msid_2) < 0) ret_val = -1; - if(sid_2 > 0) - if(H5Sclose(sid_2) < 0) + if (sid_2 > 0) + if (H5Sclose(sid_2) < 0) ret_val = -1; - if(tid_2 > 0) - if(H5Tclose(tid_2) < 0) + if (tid_2 > 0) + if (H5Tclose(tid_2) < 0) ret_val = -1; - if(pid_2 > 0) - if(H5Pclose(pid_2) < 0) + if (pid_2 > 0) + if (H5Pclose(pid_2) < 0) ret_val = -1; - if(did_2 > 0) - if(H5Dclose(did_2) < 0) + if (did_2 > 0) + if (H5Dclose(did_2) < 0) ret_val = -1; - if(sid_3 > 0) - if(H5Sclose(sid_3) < 0) + if (sid_3 > 0) + if (H5Sclose(sid_3) < 0) ret_val = -1; - if(tid_3 > 0) - if(H5Tclose(tid_3) < 0) + if (tid_3 > 0) + if (H5Tclose(tid_3) < 0) ret_val = -1; - if(did_3 > 0) - if(H5Dclose(did_3) < 0) + if (did_3 > 0) + if (H5Dclose(did_3) < 0) ret_val = -1; return ret_val; } /* end H5TBinsert_field() */ /*------------------------------------------------------------------------- -* Function: H5TBdelete_field -* -* Purpose: Deletes a field -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: January 30, 2002 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBdelete_field(hid_t loc_id, - const char *dset_name, - const char *field_name) + * Function: H5TBdelete_field + * + * Purpose: Deletes a field + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: January 30, 2002 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBdelete_field(hid_t loc_id, const char *dset_name, const char *field_name) { /* identifiers for the 1st original dataset */ - hid_t did_1 = H5I_BADID; - hid_t tid_1 = H5I_BADID; - hid_t sid_1 = H5I_BADID; - hid_t pid_1 = H5I_BADID; + hid_t did_1 = H5I_BADID; + hid_t tid_1 = H5I_BADID; + hid_t sid_1 = H5I_BADID; + hid_t pid_1 = H5I_BADID; /* identifiers for the 2nd new dataset */ - hid_t did_2 = H5I_BADID; - hid_t tid_2 = H5I_BADID; - hid_t sid_2 = H5I_BADID; - hid_t pid_2 = H5I_BADID; + hid_t did_2 = H5I_BADID; + hid_t tid_2 = H5I_BADID; + hid_t sid_2 = H5I_BADID; + hid_t pid_2 = H5I_BADID; /* identifiers for the 3rd final dataset */ - hid_t did_3 = H5I_BADID; - hid_t tid_3 = H5I_BADID; - hid_t member_type_id = H5I_BADID; - hid_t preserve_id = H5I_BADID; - hid_t read_type_id = H5I_BADID; - hid_t write_type_id = H5I_BADID; - hid_t attr_id = H5I_BADID; - size_t member_size; - size_t type_size1; - size_t type_size2; - size_t curr_offset; - size_t delete_member_size = 0; - size_t member_offset; - hsize_t nfields; - hsize_t nrecords; - hsize_t dims_chunk[1]; - hsize_t dims[1]; - hsize_t maxdims[1] = { H5S_UNLIMITED }; - hsize_t i; - char attr_name[255]; - char table_title[255]; - char *member_name = NULL; - unsigned char *tmp_buf = NULL; + hid_t did_3 = H5I_BADID; + hid_t tid_3 = H5I_BADID; + hid_t member_type_id = H5I_BADID; + hid_t preserve_id = H5I_BADID; + hid_t read_type_id = H5I_BADID; + hid_t write_type_id = H5I_BADID; + hid_t attr_id = H5I_BADID; + size_t member_size; + size_t type_size1; + size_t type_size2; + size_t curr_offset; + size_t delete_member_size = 0; + size_t member_offset; + hsize_t nfields; + hsize_t nrecords; + hsize_t dims_chunk[1]; + hsize_t dims[1]; + hsize_t maxdims[1] = {H5S_UNLIMITED}; + hsize_t i; + char attr_name[255]; + char table_title[255]; + char * member_name = NULL; + unsigned char *tmp_buf = NULL; unsigned char *tmp_fill_buf = NULL; - htri_t has_fill = FALSE; - herr_t ret_val = -1; - + htri_t has_fill = FALSE; + herr_t ret_val = -1; /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; - if (field_name == NULL) + if (field_name == NULL) goto out; /* get the number of records and fields */ - if(H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0) + if (H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0) goto out; /*------------------------------------------------------------------------- - * get information about the old data type - *------------------------------------------------------------------------- - */ + * get information about the old data type + *------------------------------------------------------------------------- + */ /* open the dataset. */ - if((did_1 = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did_1 = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get creation properties list */ - if((pid_1 = H5Dget_create_plist(did_1)) < 0) + if ((pid_1 = H5Dget_create_plist(did_1)) < 0) goto out; /* get the datatype */ - if((tid_1 = H5Dget_type(did_1)) < 0) + if ((tid_1 = H5Dget_type(did_1)) < 0) goto out; /* get the size of the datatype */ - if(0 == (type_size1 = H5Tget_size(tid_1))) + if (0 == (type_size1 = H5Tget_size(tid_1))) goto out; /* get the dataspace handle */ - if((sid_1 = H5Dget_space(did_1)) < 0) + if ((sid_1 = H5Dget_space(did_1)) < 0) goto out; /* get dimension */ - if(H5Sget_simple_extent_dims(sid_1, dims, NULL) < 0) + if (H5Sget_simple_extent_dims(sid_1, dims, NULL) < 0) goto out; /*------------------------------------------------------------------------- - * create a new data type; first we find the size of the datatype to delete - *------------------------------------------------------------------------- - */ + * create a new data type; first we find the size of the datatype to delete + *------------------------------------------------------------------------- + */ /* check out the field */ - for(i = 0; i < nfields; i++) { + for (i = 0; i < nfields; i++) { /* get the member name */ - if(NULL == (member_name = H5Tget_member_name(tid_1, (unsigned)i))) + if (NULL == (member_name = H5Tget_member_name(tid_1, (unsigned)i))) goto out; /* we want to find the field to delete */ - if(H5TB_find_field(member_name, field_name)) { + if (H5TB_find_field(member_name, field_name)) { /* get the member type */ - if((member_type_id = H5Tget_member_type(tid_1, (unsigned)i)) < 0) + if ((member_type_id = H5Tget_member_type(tid_1, (unsigned)i)) < 0) goto out; /* get the member size */ - if(0 == (delete_member_size = H5Tget_size(member_type_id))) + if (0 == (delete_member_size = H5Tget_size(member_type_id))) goto out; /* close the member type */ - if(H5Tclose(member_type_id) < 0) + if (H5Tclose(member_type_id) < 0) goto out; member_type_id = H5I_BADID; @@ -2607,75 +2531,75 @@ herr_t H5TBdelete_field(hid_t loc_id, } /* end for */ /* no field to delete was found */ - if(delete_member_size == 0) + if (delete_member_size == 0) goto out; /*------------------------------------------------------------------------- - * create a new data type; we now insert all the fields into the new type - *------------------------------------------------------------------------- - */ + * create a new data type; we now insert all the fields into the new type + *------------------------------------------------------------------------- + */ type_size2 = type_size1 - delete_member_size; /* create the data type. */ - if((tid_2 = H5Tcreate (H5T_COMPOUND, type_size2)) < 0) + if ((tid_2 = H5Tcreate(H5T_COMPOUND, type_size2)) < 0) goto out; curr_offset = 0; /* alloc fill value attribute buffer */ - if(NULL == (tmp_fill_buf = (unsigned char *)HDmalloc((size_t)type_size2))) + if (NULL == (tmp_fill_buf = (unsigned char *)HDmalloc((size_t)type_size2))) goto out; /*------------------------------------------------------------------------- - * get attributes from previous table in the process - *------------------------------------------------------------------------- - */ + * get attributes from previous table in the process + *------------------------------------------------------------------------- + */ /* get the table title */ - if((H5TBAget_title(did_1, table_title)) < 0) + if ((H5TBAget_title(did_1, table_title)) < 0) goto out; /* insert the old fields except the one to delete */ - for(i = 0; i < nfields; i++) { + for (i = 0; i < nfields; i++) { /* get the member name */ - if(NULL == (member_name = H5Tget_member_name(tid_1, (unsigned)i))) + if (NULL == (member_name = H5Tget_member_name(tid_1, (unsigned)i))) goto out; /* we want to skip the field to delete */ - if(!H5TB_find_field(member_name, field_name)) { + if (!H5TB_find_field(member_name, field_name)) { /* get the member type */ - if((member_type_id = H5Tget_member_type(tid_1, (unsigned)i)) < 0) + if ((member_type_id = H5Tget_member_type(tid_1, (unsigned)i)) < 0) goto out; /* get the member size */ - if(0 == (member_size = H5Tget_size(member_type_id))) + if (0 == (member_size = H5Tget_size(member_type_id))) goto out; /* insert it into the new type */ - if(H5Tinsert(tid_2, member_name, curr_offset, member_type_id) < 0) + if (H5Tinsert(tid_2, member_name, curr_offset, member_type_id) < 0) goto out; /*------------------------------------------------------------------------- - * get the fill value information - *------------------------------------------------------------------------- - */ + * get the fill value information + *------------------------------------------------------------------------- + */ HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)i); /* check if we have the _FILL attribute */ - if((has_fill = H5LT_find_attribute(did_1, attr_name)) < 0) + if ((has_fill = H5LT_find_attribute(did_1, attr_name)) < 0) goto out; /* get it */ - if(has_fill) - if(H5LT_get_attribute_disk(did_1, attr_name, tmp_fill_buf + curr_offset) < 0) + if (has_fill) + if (H5LT_get_attribute_disk(did_1, attr_name, tmp_fill_buf + curr_offset) < 0) goto out; curr_offset += member_size; /* close the member type */ - if(H5Tclose(member_type_id) < 0) + if (H5Tclose(member_type_id) < 0) goto out; member_type_id = H5I_BADID; } /* end if */ @@ -2685,96 +2609,96 @@ herr_t H5TBdelete_field(hid_t loc_id, } /* end for */ /*------------------------------------------------------------------------- - * create a new temporary dataset - *------------------------------------------------------------------------- - */ + * create a new temporary dataset + *------------------------------------------------------------------------- + */ /* retrieve the size of chunk */ - if(H5Pget_chunk(pid_1, 1, dims_chunk) < 0) + if (H5Pget_chunk(pid_1, 1, dims_chunk) < 0) goto out; /* create a new simple data space with unlimited size, using the dimension */ - if((sid_2 = H5Screate_simple(1, dims, maxdims)) < 0) + if ((sid_2 = H5Screate_simple(1, dims, maxdims)) < 0) goto out; /* modify dataset creation properties, i.e. enable chunking */ pid_2 = H5Pcreate(H5P_DATASET_CREATE); - if(H5Pset_chunk(pid_2, 1, dims_chunk) < 0) + if (H5Pset_chunk(pid_2, 1, dims_chunk) < 0) goto out; /* create the dataset. */ - if((did_2 = H5Dcreate2(loc_id, "new", tid_2, sid_2, H5P_DEFAULT, pid_2, H5P_DEFAULT)) < 0) + if ((did_2 = H5Dcreate2(loc_id, "new", tid_2, sid_2, H5P_DEFAULT, pid_2, H5P_DEFAULT)) < 0) goto out; /*------------------------------------------------------------------------- - * we have to read field by field of the old dataset and save it into the new one - *------------------------------------------------------------------------- - */ - for(i = 0; i < nfields; i++) { + * we have to read field by field of the old dataset and save it into the new one + *------------------------------------------------------------------------- + */ + for (i = 0; i < nfields; i++) { /* get the member name */ - if(NULL == (member_name = H5Tget_member_name(tid_1, (unsigned)i))) + if (NULL == (member_name = H5Tget_member_name(tid_1, (unsigned)i))) goto out; /* skip the field to delete */ - if(!H5TB_find_field(member_name, field_name)) { + if (!H5TB_find_field(member_name, field_name)) { /* get the member type */ - if((member_type_id = H5Tget_member_type(tid_1, (unsigned)i)) < 0) + if ((member_type_id = H5Tget_member_type(tid_1, (unsigned)i)) < 0) goto out; /* get the member size */ - if(0 == (member_size = H5Tget_size(member_type_id))) + if (0 == (member_size = H5Tget_size(member_type_id))) goto out; /* create a read id */ - if((read_type_id = H5Tcreate(H5T_COMPOUND, member_size)) < 0) + if ((read_type_id = H5Tcreate(H5T_COMPOUND, member_size)) < 0) goto out; /* insert it into the new type */ - if(H5Tinsert(read_type_id, member_name, (size_t)0, member_type_id) < 0) + if (H5Tinsert(read_type_id, member_name, (size_t)0, member_type_id) < 0) goto out; - if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, member_size))) + if (NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, member_size))) goto out; /* read */ - if(H5Dread(did_1, read_type_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, tmp_buf) < 0) + if (H5Dread(did_1, read_type_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, tmp_buf) < 0) goto out; /* create a write id */ - if((write_type_id = H5Tcreate(H5T_COMPOUND, member_size)) < 0) + if ((write_type_id = H5Tcreate(H5T_COMPOUND, member_size)) < 0) goto out; /* the field in the file is found by its name */ - if(H5Tinsert(write_type_id, member_name, (size_t)0, member_type_id) < 0) + if (H5Tinsert(write_type_id, member_name, (size_t)0, member_type_id) < 0) goto out; /* create xfer properties to preserve initialized data */ - if((preserve_id = H5Pcreate(H5P_DATASET_XFER)) < 0) + if ((preserve_id = H5Pcreate(H5P_DATASET_XFER)) < 0) goto out; - if(H5Pset_preserve(preserve_id, 1) < 0) + if (H5Pset_preserve(preserve_id, 1) < 0) goto out; /* write */ - if(H5Dwrite(did_2, write_type_id, H5S_ALL, H5S_ALL, preserve_id, tmp_buf) < 0) + if (H5Dwrite(did_2, write_type_id, H5S_ALL, H5S_ALL, preserve_id, tmp_buf) < 0) goto out; /* end access to the property list */ - if(H5Pclose(preserve_id) < 0) + if (H5Pclose(preserve_id) < 0) goto out; preserve_id = H5I_BADID; /* close the member type */ - if(H5Tclose(member_type_id) < 0) + if (H5Tclose(member_type_id) < 0) goto out; member_type_id = H5I_BADID; /* close the read type */ - if(H5Tclose(read_type_id) < 0) + if (H5Tclose(read_type_id) < 0) goto out; read_type_id = H5I_BADID; /* close the write type */ - if(H5Tclose(write_type_id) < 0) + if (H5Tclose(write_type_id) < 0) goto out; write_type_id = H5I_BADID; @@ -2788,51 +2712,51 @@ herr_t H5TBdelete_field(hid_t loc_id, } /* end for */ /*------------------------------------------------------------------------- - * delete 1st table - *------------------------------------------------------------------------- - */ - if(H5Ldelete(loc_id, dset_name, H5P_DEFAULT) < 0) + * delete 1st table + *------------------------------------------------------------------------- + */ + if (H5Ldelete(loc_id, dset_name, H5P_DEFAULT) < 0) goto out; /*------------------------------------------------------------------------- - * rename 2nd table - *------------------------------------------------------------------------- - */ - if(H5Lmove(loc_id, "new", H5L_SAME_LOC, dset_name, H5P_DEFAULT, H5P_DEFAULT) < 0) + * rename 2nd table + *------------------------------------------------------------------------- + */ + if (H5Lmove(loc_id, "new", H5L_SAME_LOC, dset_name, H5P_DEFAULT, H5P_DEFAULT) < 0) goto out; /*------------------------------------------------------------------------- - * attach the conforming table attributes - *------------------------------------------------------------------------- - */ + * attach the conforming table attributes + *------------------------------------------------------------------------- + */ /* get the number of records and fields */ - if(H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0) + if (H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0) goto out; /* open the dataset. */ - if((did_3 = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did_3 = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get the datatype */ - if((tid_3 = H5Dget_type(did_3)) < 0) + if ((tid_3 = H5Dget_type(did_3)) < 0) goto out; /* set the attributes */ - if(H5TB_attach_attributes(table_title, loc_id, dset_name, nfields, tid_3) < 0) + if (H5TB_attach_attributes(table_title, loc_id, dset_name, nfields, tid_3) < 0) goto out; /*------------------------------------------------------------------------- - * attach the fill attributes from previous table - *------------------------------------------------------------------------- - */ - if(has_fill) { - if((sid_1 = H5Screate(H5S_SCALAR)) < 0) + * attach the fill attributes from previous table + *------------------------------------------------------------------------- + */ + if (has_fill) { + if ((sid_1 = H5Screate(H5S_SCALAR)) < 0) goto out; - for(i = 0; i < nfields; i++) { + for (i = 0; i < nfields; i++) { /* get the member type */ - if((member_type_id = H5Tget_member_type(tid_3, (unsigned)i)) < 0) + if ((member_type_id = H5Tget_member_type(tid_3, (unsigned)i)) < 0) goto out; /* get the member offset */ @@ -2840,24 +2764,24 @@ herr_t H5TBdelete_field(hid_t loc_id, HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)i); - if((attr_id = H5Acreate2(did_3, attr_name, member_type_id, sid_1, H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((attr_id = H5Acreate2(did_3, attr_name, member_type_id, sid_1, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; - if(H5Awrite(attr_id, member_type_id, tmp_fill_buf + member_offset) < 0) + if (H5Awrite(attr_id, member_type_id, tmp_fill_buf + member_offset) < 0) goto out; - if(H5Aclose(attr_id) < 0) + if (H5Aclose(attr_id) < 0) goto out; attr_id = H5I_BADID; /* close the member type */ - if(H5Tclose(member_type_id) < 0) + if (H5Tclose(member_type_id) < 0) goto out; member_type_id = H5I_BADID; } /* end for */ /* close data space. */ - if(H5Sclose(sid_1) < 0) + if (H5Sclose(sid_1) < 0) goto out; sid_1 = H5I_BADID; } /* end if */ @@ -2865,232 +2789,227 @@ herr_t H5TBdelete_field(hid_t loc_id, ret_val = 0; out: - if(member_name) + if (member_name) H5free_memory(member_name); - if(tmp_fill_buf) + if (tmp_fill_buf) HDfree(tmp_fill_buf); - if(tmp_buf) + if (tmp_buf) HDfree(tmp_buf); - if(attr_id > 0) - if(H5Aclose(attr_id) < 0) + if (attr_id > 0) + if (H5Aclose(attr_id) < 0) ret_val = -1; - if(preserve_id > 0) - if(H5Pclose(preserve_id) < 0) + if (preserve_id > 0) + if (H5Pclose(preserve_id) < 0) ret_val = -1; - if(member_type_id > 0) - if(H5Tclose(member_type_id) < 0) + if (member_type_id > 0) + if (H5Tclose(member_type_id) < 0) ret_val = -1; - if(read_type_id > 0) - if(H5Tclose(read_type_id) < 0) + if (read_type_id > 0) + if (H5Tclose(read_type_id) < 0) ret_val = -1; - if(write_type_id > 0) - if(H5Tclose(write_type_id) < 0) + if (write_type_id > 0) + if (H5Tclose(write_type_id) < 0) ret_val = -1; - if(tid_1 > 0) - if(H5Tclose(tid_1) < 0) + if (tid_1 > 0) + if (H5Tclose(tid_1) < 0) ret_val = -1; - if(pid_1 > 0) - if(H5Pclose(pid_1) < 0) + if (pid_1 > 0) + if (H5Pclose(pid_1) < 0) ret_val = -1; - if(sid_1 > 0) - if(H5Sclose(sid_1) < 0) + if (sid_1 > 0) + if (H5Sclose(sid_1) < 0) ret_val = -1; - if(did_1 > 0) - if(H5Dclose(did_1) < 0) + if (did_1 > 0) + if (H5Dclose(did_1) < 0) ret_val = -1; - if(sid_2 > 0) - if(H5Sclose(sid_2) < 0) + if (sid_2 > 0) + if (H5Sclose(sid_2) < 0) ret_val = -1; - if(tid_2 > 0) - if(H5Tclose(tid_2) < 0) + if (tid_2 > 0) + if (H5Tclose(tid_2) < 0) ret_val = -1; - if(pid_2 > 0) - if(H5Pclose(pid_2) < 0) + if (pid_2 > 0) + if (H5Pclose(pid_2) < 0) ret_val = -1; - if(did_2 > 0) - if(H5Dclose(did_2) < 0) + if (did_2 > 0) + if (H5Dclose(did_2) < 0) ret_val = -1; - if(tid_3 > 0) - if(H5Tclose(tid_3) < 0) + if (tid_3 > 0) + if (H5Tclose(tid_3) < 0) ret_val = -1; - if(did_3 > 0) - if(H5Dclose(did_3) < 0) + if (did_3 > 0) + if (H5Dclose(did_3) < 0) ret_val = -1; return ret_val; } /* end H5TBdelete_field() */ /*------------------------------------------------------------------------- -* -* Table attribute functions -* -*------------------------------------------------------------------------- -*/ + * + * Table attribute functions + * + *------------------------------------------------------------------------- + */ /*------------------------------------------------------------------------- -* Function: H5TBAget_title -* -* Purpose: Read the table title -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: January 30, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBAget_title(hid_t loc_id, - char *table_title) + * Function: H5TBAget_title + * + * Purpose: Read the table title + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: January 30, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBAget_title(hid_t loc_id, char *table_title) { /* Get the TITLE attribute */ - if(H5LT_get_attribute_disk(loc_id, "TITLE", table_title) < 0) + if (H5LT_get_attribute_disk(loc_id, "TITLE", table_title) < 0) return -1; return 0; } /*------------------------------------------------------------------------- -* Function: H5TBAget_fill -* -* Purpose: Read the table attribute fill values -* -* Return: Success: TRUE/FALSE, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: January 30, 2002 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -htri_t H5TBAget_fill(hid_t loc_id, - const char *dset_name, - hid_t dset_id, - unsigned char *dst_buf) + * Function: H5TBAget_fill + * + * Purpose: Read the table attribute fill values + * + * Return: Success: TRUE/FALSE, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: January 30, 2002 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +htri_t +H5TBAget_fill(hid_t loc_id, const char *dset_name, hid_t dset_id, unsigned char *dst_buf) { - hsize_t nfields; - hsize_t nrecords; - hsize_t i; - size_t *src_offset = NULL; - char attr_name[255]; - htri_t has_fill = FALSE; - htri_t ret_val = -1; + hsize_t nfields; + hsize_t nrecords; + hsize_t i; + size_t *src_offset = NULL; + char attr_name[255]; + htri_t has_fill = FALSE; + htri_t ret_val = -1; /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; /* get the number of records and fields */ - if(H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0) + if (H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0) goto out; - if(NULL == (src_offset = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t)))) + if (NULL == (src_offset = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t)))) goto out; /* get field info */ - if(H5TBget_field_info(loc_id, dset_name, NULL, NULL, src_offset, NULL) < 0) + if (H5TBget_field_info(loc_id, dset_name, NULL, NULL, src_offset, NULL) < 0) goto out; - for(i = 0; i < nfields; i++) { + for (i = 0; i < nfields; i++) { HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)i); /* check if we have the _FILL attribute */ - if((has_fill = H5LT_find_attribute(dset_id, attr_name)) < 0) + if ((has_fill = H5LT_find_attribute(dset_id, attr_name)) < 0) goto out; /* get it */ - if(has_fill) - if(H5LT_get_attribute_disk(dset_id, attr_name, dst_buf + src_offset[i]) < 0) + if (has_fill) + if (H5LT_get_attribute_disk(dset_id, attr_name, dst_buf + src_offset[i]) < 0) goto out; } /* end for */ ret_val = has_fill; out: - if(src_offset) + if (src_offset) HDfree(src_offset); - + return ret_val; } /* end H5TBAget_fill() */ - /*------------------------------------------------------------------------- -* -* Inquiry functions -* -*------------------------------------------------------------------------- -*/ + * + * Inquiry functions + * + *------------------------------------------------------------------------- + */ /*------------------------------------------------------------------------- -* Function: H5TBget_table_info -* -* Purpose: Gets the number of records and fields of a table -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 19, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBget_table_info(hid_t loc_id, - const char *dset_name, - hsize_t *nfields, - hsize_t *nrecords) + * Function: H5TBget_table_info + * + * Purpose: Gets the number of records and fields of a table + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: November 19, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBget_table_info(hid_t loc_id, const char *dset_name, hsize_t *nfields, hsize_t *nrecords) { - hid_t tid = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t did = H5I_BADID; - hsize_t dims[1]; - int num_members; - herr_t ret_val = -1; + hid_t tid = H5I_BADID; + hid_t sid = H5I_BADID; + hid_t did = H5I_BADID; + hsize_t dims[1]; + int num_members; + herr_t ret_val = -1; /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; /* open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get the datatype */ - if((tid = H5Dget_type(did)) < 0) + if ((tid = H5Dget_type(did)) < 0) goto out; /* get the number of members */ - if((num_members = H5Tget_nmembers(tid)) < 0) + if ((num_members = H5Tget_nmembers(tid)) < 0) goto out; /*------------------------------------------------------------------------- - * get number of nfields - *------------------------------------------------------------------------- - */ - if(nfields) + * get number of nfields + *------------------------------------------------------------------------- + */ + if (nfields) *nfields = (hsize_t)num_members; /*------------------------------------------------------------------------- - * get number of records - *------------------------------------------------------------------------- - */ - if(nrecords) { + * get number of records + *------------------------------------------------------------------------- + */ + if (nrecords) { /* get the dataspace handle */ - if((sid = H5Dget_space(did)) < 0) + if ((sid = H5Dget_space(did)) < 0) goto out; /* get dimension */ - if(H5Sget_simple_extent_dims(sid, dims, NULL) < 0) + if (H5Sget_simple_extent_dims(sid, dims, NULL) < 0) goto out; /* terminate access to the dataspace */ - if(H5Sclose(sid) < 0) + if (H5Sclose(sid) < 0) goto out; sid = H5I_BADID; @@ -3100,106 +3019,103 @@ herr_t H5TBget_table_info(hid_t loc_id, ret_val = 0; out: - if(sid > 0) - if(H5Sclose(sid) < 0) + if (sid > 0) + if (H5Sclose(sid) < 0) ret_val = -1; - if(tid > 0) - if(H5Tclose(tid) < 0) + if (tid > 0) + if (H5Tclose(tid) < 0) ret_val = -1; - if(did > 0) - if(H5Dclose(did) < 0) + if (did > 0) + if (H5Dclose(did) < 0) ret_val = -1; return ret_val; } /* end H5TBget_table_info() */ /*------------------------------------------------------------------------- -* Function: H5TBget_field_info -* -* Purpose: Get information about fields -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 19, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -herr_t H5TBget_field_info(hid_t loc_id, - const char *dset_name, - char *field_names[], - size_t *field_sizes, - size_t *field_offsets, - size_t *type_size) + * Function: H5TBget_field_info + * + * Purpose: Get information about fields + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: November 19, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +herr_t +H5TBget_field_info(hid_t loc_id, const char *dset_name, char *field_names[], size_t *field_sizes, + size_t *field_offsets, size_t *type_size) { - hid_t did = H5I_BADID; /* dataset ID */ - hid_t tid = H5I_BADID; /* file type ID */ - hid_t n_tid = H5I_BADID; /* native type ID */ - hid_t m_tid = H5I_BADID; /* member type ID */ - hid_t nm_tid = H5I_BADID; /* native member ID */ - hssize_t nfields; - hssize_t i; - herr_t ret_val = -1; + hid_t did = H5I_BADID; /* dataset ID */ + hid_t tid = H5I_BADID; /* file type ID */ + hid_t n_tid = H5I_BADID; /* native type ID */ + hid_t m_tid = H5I_BADID; /* member type ID */ + hid_t nm_tid = H5I_BADID; /* native member ID */ + hssize_t nfields; + hssize_t i; + herr_t ret_val = -1; /* check the arguments */ - if (dset_name == NULL) + if (dset_name == NULL) goto out; /* open the dataset. */ - if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) + if ((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0) goto out; /* get the datatype */ - if((tid = H5Dget_type(did)) < 0) + if ((tid = H5Dget_type(did)) < 0) goto out; - if((n_tid = H5Tget_native_type(tid, H5T_DIR_DEFAULT)) < 0) + if ((n_tid = H5Tget_native_type(tid, H5T_DIR_DEFAULT)) < 0) goto out; /* get the type size */ - if(type_size) - if(0 == (*type_size = H5Tget_size(n_tid))) + if (type_size) + if (0 == (*type_size = H5Tget_size(n_tid))) goto out; /* get the number of members */ - if((nfields = H5Tget_nmembers(tid)) < 0) + if ((nfields = H5Tget_nmembers(tid)) < 0) goto out; /* iterate tru the members */ - for(i = 0; i < nfields; i++) { + for (i = 0; i < nfields; i++) { /* get the member name */ - if(field_names) { - char *member_name; + if (field_names) { + char *member_name; - if(NULL == (member_name = H5Tget_member_name(tid, (unsigned)i))) + if (NULL == (member_name = H5Tget_member_name(tid, (unsigned)i))) goto out; strcpy(field_names[i], member_name); H5free_memory(member_name); } /* end if */ /* get the member type */ - if((m_tid = H5Tget_member_type(tid, (unsigned)i)) < 0) + if ((m_tid = H5Tget_member_type(tid, (unsigned)i)) < 0) goto out; - if((nm_tid = H5Tget_native_type(m_tid, H5T_DIR_DEFAULT)) < 0) + if ((nm_tid = H5Tget_native_type(m_tid, H5T_DIR_DEFAULT)) < 0) goto out; /* get the member size */ - if(field_sizes) - if(0 == (field_sizes[i] = H5Tget_size(nm_tid))) + if (field_sizes) + if (0 == (field_sizes[i] = H5Tget_size(nm_tid))) goto out; /* get the member offset */ - if(field_offsets) - field_offsets[i] = H5Tget_member_offset(n_tid, (unsigned) i); + if (field_offsets) + field_offsets[i] = H5Tget_member_offset(n_tid, (unsigned)i); /* close the member types */ - if(H5Tclose(m_tid) < 0) + if (H5Tclose(m_tid) < 0) goto out; m_tid = H5I_BADID; - if(H5Tclose(nm_tid) < 0) + if (H5Tclose(nm_tid) < 0) goto out; nm_tid = H5I_BADID; } /* end for */ @@ -3207,122 +3123,119 @@ herr_t H5TBget_field_info(hid_t loc_id, ret_val = 0; out: - if(tid > 0) - if(H5Tclose(tid) < 0) + if (tid > 0) + if (H5Tclose(tid) < 0) ret_val = -1; - if(n_tid > 0) - if(H5Tclose(n_tid) < 0) + if (n_tid > 0) + if (H5Tclose(n_tid) < 0) ret_val = -1; - if(m_tid > 0) - if(H5Tclose(m_tid) < 0) + if (m_tid > 0) + if (H5Tclose(m_tid) < 0) ret_val = -1; - if(nm_tid > 0) - if(H5Tclose(nm_tid) < 0) + if (nm_tid > 0) + if (H5Tclose(nm_tid) < 0) ret_val = -1; - if(did > 0) - if(H5Dclose(did) < 0) + if (did > 0) + if (H5Dclose(did) < 0) ret_val = -1; return ret_val; } /* end H5TBget_field_info() */ /*------------------------------------------------------------------------- -* -* internal functions -* -*------------------------------------------------------------------------- -*/ + * + * internal functions + * + *------------------------------------------------------------------------- + */ /*------------------------------------------------------------------------- -* Function: H5TB_find_field -* -* Purpose: Find a string field -* -* Return: Success: TRUE/FALSE, Failure: N/A -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: November 19, 2001 -* -*------------------------------------------------------------------------- -*/ -static -hbool_t H5TB_find_field(const char *field, const char *field_list) + * Function: H5TB_find_field + * + * Purpose: Find a string field + * + * Return: Success: TRUE/FALSE, Failure: N/A + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: November 19, 2001 + * + *------------------------------------------------------------------------- + */ +static hbool_t +H5TB_find_field(const char *field, const char *field_list) { const char *start = field_list; const char *end; /* check the arguments */ - if (field == NULL) - return FALSE; - if (field_list == NULL) - return FALSE; + if (field == NULL) + return FALSE; + if (field_list == NULL) + return FALSE; - while((end = HDstrstr(start, ",")) != 0) { + while ((end = HDstrstr(start, ",")) != 0) { ptrdiff_t count = end - start; - if(HDstrncmp(start, field, (size_t)count) == 0 && (size_t)count == HDstrlen(field)) + if (HDstrncmp(start, field, (size_t)count) == 0 && (size_t)count == HDstrlen(field)) return TRUE; start = end + 1; } /* end while */ - if(HDstrncmp(start, field, HDstrlen(field)) == 0) + if (HDstrncmp(start, field, HDstrlen(field)) == 0) return TRUE; return FALSE; } /* end H5TB_find_field() */ /*------------------------------------------------------------------------- -* Function: H5TB_attach_attributes -* -* Purpose: Private function that creates the conforming table attributes; -* Used by H5TBcombine_tables; not used by H5TBmake_table, which does not read -* the fill value attributes from an existing table -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: December 6, 2001 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -static -herr_t H5TB_attach_attributes(const char *table_title, - hid_t loc_id, - const char *dset_name, - hsize_t nfields, - hid_t tid) + * Function: H5TB_attach_attributes + * + * Purpose: Private function that creates the conforming table attributes; + * Used by H5TBcombine_tables; not used by H5TBmake_table, which does not read + * the fill value attributes from an existing table + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: December 6, 2001 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +static herr_t +H5TB_attach_attributes(const char *table_title, hid_t loc_id, const char *dset_name, hsize_t nfields, + hid_t tid) { - char attr_name[255]; - char *member_name = NULL; - hsize_t i; - herr_t ret_val = -1; + char attr_name[255]; + char * member_name = NULL; + hsize_t i; + herr_t ret_val = -1; /* attach the CLASS attribute */ - if(H5LTset_attribute_string(loc_id, dset_name, "CLASS", TABLE_CLASS) < 0) + if (H5LTset_attribute_string(loc_id, dset_name, "CLASS", TABLE_CLASS) < 0) goto out; /* attach the VERSION attribute */ - if(H5LTset_attribute_string(loc_id, dset_name, "VERSION", TABLE_VERSION) < 0) + if (H5LTset_attribute_string(loc_id, dset_name, "VERSION", TABLE_VERSION) < 0) goto out; /* attach the TITLE attribute */ - if(H5LTset_attribute_string(loc_id, dset_name, "TITLE", table_title) < 0) + if (H5LTset_attribute_string(loc_id, dset_name, "TITLE", table_title) < 0) goto out; /* attach the FIELD_ name attribute */ - for(i = 0; i < nfields; i++) { + for (i = 0; i < nfields; i++) { /* get the member name */ - if(NULL == (member_name = H5Tget_member_name(tid, (unsigned)i))) + if (NULL == (member_name = H5Tget_member_name(tid, (unsigned)i))) goto out; HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_NAME", (int)i); /* attach the attribute */ - if(H5LTset_attribute_string(loc_id, dset_name, attr_name, member_name) < 0) + if (H5LTset_attribute_string(loc_id, dset_name, attr_name, member_name) < 0) goto out; H5free_memory(member_name); @@ -3332,57 +3245,53 @@ herr_t H5TB_attach_attributes(const char *table_title, ret_val = 0; out: - if(member_name) + if (member_name) H5free_memory(member_name); return ret_val; } /* end H5TB_attach_attributes() */ /*------------------------------------------------------------------------- -* Function: H5TB_create_type -* -* Purpose: Private function that creates a memory type ID -* -* Return: Success: the memory type ID, Failure: -1 -* -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu -* -* Date: March 31, 2004 -* -* Comments: -* -*------------------------------------------------------------------------- -*/ -static -hid_t H5TB_create_type(hid_t loc_id, - const char *dset_name, - size_t type_size, - const size_t *field_offset, - const size_t *field_sizes, - hid_t ftype_id) + * Function: H5TB_create_type + * + * Purpose: Private function that creates a memory type ID + * + * Return: Success: the memory type ID, Failure: -1 + * + * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * + * Date: March 31, 2004 + * + * Comments: + * + *------------------------------------------------------------------------- + */ +static hid_t +H5TB_create_type(hid_t loc_id, const char *dset_name, size_t type_size, const size_t *field_offset, + const size_t *field_sizes, hid_t ftype_id) { hid_t mem_type_id = H5I_BADID; - hid_t mtype_id = H5I_BADID; - hid_t nmtype_id = H5I_BADID; + hid_t mtype_id = H5I_BADID; + hid_t nmtype_id = H5I_BADID; size_t size_native; hsize_t nfields = 0; - char **fnames = NULL; + char ** fnames = NULL; unsigned i; - hid_t ret_val = -1; + hid_t ret_val = -1; /* get the number of fields */ - if(H5TBget_table_info(loc_id, dset_name, &nfields, NULL) < 0) + if (H5TBget_table_info(loc_id, dset_name, &nfields, NULL) < 0) goto out; - if(NULL == (fnames = (char**)HDcalloc(sizeof(char*), (size_t)nfields))) + if (NULL == (fnames = (char **)HDcalloc(sizeof(char *), (size_t)nfields))) goto out; - for(i = 0; i < nfields; i++) - if(NULL == (fnames[i] = (char*)HDmalloc(HLTB_MAX_FIELD_LEN))) + for (i = 0; i < nfields; i++) + if (NULL == (fnames[i] = (char *)HDmalloc(HLTB_MAX_FIELD_LEN))) goto out; /* get field info */ - if(H5TBget_field_info(loc_id, dset_name, fnames, NULL, NULL, NULL) < 0) + if (H5TBget_field_info(loc_id, dset_name, fnames, NULL, NULL, NULL) < 0) goto out; /* create the memory data type */ @@ -3390,22 +3299,22 @@ hid_t H5TB_create_type(hid_t loc_id, goto out; /* get each field ID and adjust its size, if necessary */ - for(i = 0; i < nfields; i++) { - if((mtype_id = H5Tget_member_type(ftype_id, i)) < 0) + for (i = 0; i < nfields; i++) { + if ((mtype_id = H5Tget_member_type(ftype_id, i)) < 0) goto out; - if((nmtype_id = H5Tget_native_type(mtype_id, H5T_DIR_DEFAULT)) < 0) + if ((nmtype_id = H5Tget_native_type(mtype_id, H5T_DIR_DEFAULT)) < 0) goto out; - if(0 == (size_native = H5Tget_size(nmtype_id))) + if (0 == (size_native = H5Tget_size(nmtype_id))) goto out; - if(field_sizes[i] != size_native) - if(H5Tset_size(nmtype_id, field_sizes[i]) < 0) + if (field_sizes[i] != size_native) + if (H5Tset_size(nmtype_id, field_sizes[i]) < 0) goto out; - if(H5Tinsert(mem_type_id, fnames[i], field_offset[i], nmtype_id) < 0) + if (H5Tinsert(mem_type_id, fnames[i], field_offset[i], nmtype_id) < 0) goto out; - if(H5Tclose(mtype_id) < 0) + if (H5Tclose(mtype_id) < 0) goto out; mtype_id = H5I_BADID; - if(H5Tclose(nmtype_id) < 0) + if (H5Tclose(nmtype_id) < 0) goto out; nmtype_id = H5I_BADID; } /* end for */ @@ -3413,159 +3322,153 @@ hid_t H5TB_create_type(hid_t loc_id, ret_val = mem_type_id; out: - if(fnames) { - for(i = 0; i < nfields; i++) - if(fnames[i]) + if (fnames) { + for (i = 0; i < nfields; i++) + if (fnames[i]) HDfree(fnames[i]); HDfree(fnames); } /* end if */ - if(mtype_id > 0) - if(H5Tclose(mtype_id) < 0) + if (mtype_id > 0) + if (H5Tclose(mtype_id) < 0) ret_val = -1; - if(nmtype_id > 0) - if(H5Tclose(nmtype_id) < 0) + if (nmtype_id > 0) + if (H5Tclose(nmtype_id) < 0) ret_val = -1; - if(ret_val < 0 && mem_type_id > 0) + if (ret_val < 0 && mem_type_id > 0) H5Tclose(mem_type_id); return ret_val; } /* end H5TB_create_type() */ /*------------------------------------------------------------------------- -* -* Functions shared between H5TB and H5PT -* -*------------------------------------------------------------------------- -*/ + * + * Functions shared between H5TB and H5PT + * + *------------------------------------------------------------------------- + */ /*------------------------------------------------------------------------- -* Function: H5TB_common_append_records -* -* Purpose: Common code for reading records shared between H5PT and H5TB -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Nat Furrer, nfurrer@ncsa.uiuc.edu -* James Laird, jlaird@ncsa.uiuc.edu -* -* Date: March 8, 2004 -* -* Comments: Called by H5TBappend_records and H5PTappend_records -* -*------------------------------------------------------------------------- -*/ -herr_t H5TB_common_append_records(hid_t dataset_id, - hid_t mem_type_id, - size_t nrecords, - hsize_t orig_table_size, - const void *buf) + * Function: H5TB_common_append_records + * + * Purpose: Common code for reading records shared between H5PT and H5TB + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Nat Furrer, nfurrer@ncsa.uiuc.edu + * James Laird, jlaird@ncsa.uiuc.edu + * + * Date: March 8, 2004 + * + * Comments: Called by H5TBappend_records and H5PTappend_records + * + *------------------------------------------------------------------------- + */ +herr_t +H5TB_common_append_records(hid_t dataset_id, hid_t mem_type_id, size_t nrecords, hsize_t orig_table_size, + const void *buf) { - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; - hsize_t count[1]; - hsize_t offset[1]; - hsize_t dims[1]; - hsize_t mem_dims[1]; - herr_t ret_val = -1; + hid_t sid = H5I_BADID; + hid_t m_sid = H5I_BADID; + hsize_t count[1]; + hsize_t offset[1]; + hsize_t dims[1]; + hsize_t mem_dims[1]; + herr_t ret_val = -1; /* extend the dataset */ dims[0] = nrecords + orig_table_size; - if(H5Dset_extent(dataset_id, dims) < 0) + if (H5Dset_extent(dataset_id, dims) < 0) goto out; /* create a simple memory data space */ mem_dims[0] = nrecords; - if((m_sid = H5Screate_simple(1, mem_dims, NULL)) < 0) + if ((m_sid = H5Screate_simple(1, mem_dims, NULL)) < 0) goto out; /* get a copy of the new file data space for writing */ - if((sid = H5Dget_space(dataset_id)) < 0) + if ((sid = H5Dget_space(dataset_id)) < 0) goto out; /* define a hyperslab in the dataset */ offset[0] = orig_table_size; - count[0] = nrecords; - if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) + count[0] = nrecords; + if (H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) goto out; /* write the records */ - if(H5Dwrite(dataset_id, mem_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0) + if (H5Dwrite(dataset_id, mem_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0) goto out; ret_val = 0; out: - if(m_sid > 0) - if(H5Sclose(m_sid) < 0) + if (m_sid > 0) + if (H5Sclose(m_sid) < 0) ret_val = -1; - if(sid > 0) - if(H5Sclose(sid) < 0) + if (sid > 0) + if (H5Sclose(sid) < 0) ret_val = -1; return ret_val; } /* end H5TB_common_append_records() */ /*------------------------------------------------------------------------- -* Function: H5TB_common_read_records -* -* Purpose: Common code for reading records shared between H5PT and H5TB -* -* Return: Success: 0, Failure: -1 -* -* Programmer: Nat Furrer, nfurrer@ncsa.uiuc.edu -* James Laird, jlaird@ncsa.uiuc.edu -* -* Date: March 8, 2004 -* -* Comments: Called by H5TBread_records and H5PTread_records -* -*------------------------------------------------------------------------- -*/ -herr_t H5TB_common_read_records(hid_t dataset_id, - hid_t mem_type_id, - hsize_t start, - size_t nrecords, - hsize_t table_size, - void *buf) + * Function: H5TB_common_read_records + * + * Purpose: Common code for reading records shared between H5PT and H5TB + * + * Return: Success: 0, Failure: -1 + * + * Programmer: Nat Furrer, nfurrer@ncsa.uiuc.edu + * James Laird, jlaird@ncsa.uiuc.edu + * + * Date: March 8, 2004 + * + * Comments: Called by H5TBread_records and H5PTread_records + * + *------------------------------------------------------------------------- + */ +herr_t +H5TB_common_read_records(hid_t dataset_id, hid_t mem_type_id, hsize_t start, size_t nrecords, + hsize_t table_size, void *buf) { - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; - hsize_t count[1]; - hsize_t offset[1]; - hsize_t mem_size[1]; - herr_t ret_val = -1; + hid_t sid = H5I_BADID; + hid_t m_sid = H5I_BADID; + hsize_t count[1]; + hsize_t offset[1]; + hsize_t mem_size[1]; + herr_t ret_val = -1; /* make sure the read request is in bounds */ - if(start + nrecords > table_size) + if (start + nrecords > table_size) goto out; /* get the dataspace handle */ - if((sid = H5Dget_space(dataset_id)) < 0) + if ((sid = H5Dget_space(dataset_id)) < 0) goto out; /* define a hyperslab in the dataset of the size of the records */ offset[0] = start; count[0] = nrecords; - if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) + if (H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0) goto out; /* create a memory dataspace handle */ mem_size[0] = count[0]; - if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) + if ((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0) goto out; - if((H5Dread(dataset_id, mem_type_id, m_sid, sid, H5P_DEFAULT, buf)) < 0) + if ((H5Dread(dataset_id, mem_type_id, m_sid, sid, H5P_DEFAULT, buf)) < 0) goto out; ret_val = 0; out: - if(m_sid > 0) - if(H5Sclose(m_sid) < 0) + if (m_sid > 0) + if (H5Sclose(m_sid) < 0) ret_val = -1; - if(sid > 0) - if(H5Sclose(sid) < 0) + if (sid > 0) + if (H5Sclose(sid) < 0) ret_val = -1; return ret_val; } /* end H5TB_common_read_records() */ - diff --git a/hl/src/H5TBprivate.h b/hl/src/H5TBprivate.h index 17306fb..abe43c4 100644 --- a/hl/src/H5TBprivate.h +++ b/hl/src/H5TBprivate.h @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -20,10 +20,9 @@ /* public TB prototypes */ #include "H5TBpublic.h" - -#define TABLE_CLASS "TABLE" -#define TABLE_VERSION "3.0" -#define HLTB_MAX_FIELD_LEN 255 +#define TABLE_CLASS "TABLE" +#define TABLE_VERSION "3.0" +#define HLTB_MAX_FIELD_LEN 255 /*------------------------------------------------------------------------- * @@ -32,11 +31,8 @@ *------------------------------------------------------------------------- */ -herr_t H5TB_common_append_records( hid_t dataset_id, - hid_t mem_type_id, - size_t nrecords, - hsize_t orig_table_size, - const void * data); +herr_t H5TB_common_append_records(hid_t dataset_id, hid_t mem_type_id, size_t nrecords, + hsize_t orig_table_size, const void *data); /*------------------------------------------------------------------------- * @@ -45,16 +41,7 @@ herr_t H5TB_common_append_records( hid_t dataset_id, *------------------------------------------------------------------------- */ - -herr_t H5TB_common_read_records( hid_t dataset_id, - hid_t mem_type_id, - hsize_t start, - size_t nrecords, - hsize_t table_size, - void *data); - - - +herr_t H5TB_common_read_records(hid_t dataset_id, hid_t mem_type_id, hsize_t start, size_t nrecords, + hsize_t table_size, void *data); #endif - diff --git a/hl/src/H5TBpublic.h b/hl/src/H5TBpublic.h index 56aa915..1324fbd 100644 --- a/hl/src/H5TBpublic.h +++ b/hl/src/H5TBpublic.h @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -14,12 +14,10 @@ #ifndef _H5TBpublic_H #define _H5TBpublic_H - #ifdef __cplusplus extern "C" { #endif - /*------------------------------------------------------------------------- * * Create functions @@ -27,20 +25,10 @@ extern "C" { *------------------------------------------------------------------------- */ -H5_HLDLL herr_t H5TBmake_table( const char *table_title, - hid_t loc_id, - const char *dset_name, - hsize_t nfields, - hsize_t nrecords, - size_t type_size, - const char *field_names[], - const size_t *field_offset, - const hid_t *field_types, - hsize_t chunk_size, - void *fill_data, - int compress, - const void *buf ); - +H5_HLDLL herr_t H5TBmake_table(const char *table_title, hid_t loc_id, const char *dset_name, hsize_t nfields, + hsize_t nrecords, size_t type_size, const char *field_names[], + const size_t *field_offset, const hid_t *field_types, hsize_t chunk_size, + void *fill_data, int compress, const void *buf); /*------------------------------------------------------------------------- * @@ -49,45 +37,21 @@ H5_HLDLL herr_t H5TBmake_table( const char *table_title, *------------------------------------------------------------------------- */ -H5_HLDLL herr_t H5TBappend_records( hid_t loc_id, - const char *dset_name, - hsize_t nrecords, - size_t type_size, - const size_t *field_offset, - const size_t *dst_sizes, - const void *buf ); - -H5_HLDLL herr_t H5TBwrite_records( hid_t loc_id, - const char *dset_name, - hsize_t start, - hsize_t nrecords, - size_t type_size, - const size_t *field_offset, - const size_t *dst_sizes, - const void *buf ); - - -H5_HLDLL herr_t H5TBwrite_fields_name( hid_t loc_id, - const char *dset_name, - const char *field_names, - hsize_t start, - hsize_t nrecords, - size_t type_size, - const size_t *field_offset, - const size_t *dst_sizes, - const void *buf ); - -H5_HLDLL herr_t H5TBwrite_fields_index( hid_t loc_id, - const char *dset_name, - hsize_t nfields, - const int *field_index, - hsize_t start, - hsize_t nrecords, - size_t type_size, - const size_t *field_offset, - const size_t *dst_sizes, - const void *buf ); +H5_HLDLL herr_t H5TBappend_records(hid_t loc_id, const char *dset_name, hsize_t nrecords, size_t type_size, + const size_t *field_offset, const size_t *dst_sizes, const void *buf); + +H5_HLDLL herr_t H5TBwrite_records(hid_t loc_id, const char *dset_name, hsize_t start, hsize_t nrecords, + size_t type_size, const size_t *field_offset, const size_t *dst_sizes, + const void *buf); +H5_HLDLL herr_t H5TBwrite_fields_name(hid_t loc_id, const char *dset_name, const char *field_names, + hsize_t start, hsize_t nrecords, size_t type_size, + const size_t *field_offset, const size_t *dst_sizes, const void *buf); + +H5_HLDLL herr_t H5TBwrite_fields_index(hid_t loc_id, const char *dset_name, hsize_t nfields, + const int *field_index, hsize_t start, hsize_t nrecords, + size_t type_size, const size_t *field_offset, const size_t *dst_sizes, + const void *buf); /*------------------------------------------------------------------------- * @@ -96,46 +60,21 @@ H5_HLDLL herr_t H5TBwrite_fields_index( hid_t loc_id, *------------------------------------------------------------------------- */ +H5_HLDLL herr_t H5TBread_table(hid_t loc_id, const char *dset_name, size_t dst_size, const size_t *dst_offset, + const size_t *dst_sizes, void *dst_buf); + +H5_HLDLL herr_t H5TBread_fields_name(hid_t loc_id, const char *dset_name, const char *field_names, + hsize_t start, hsize_t nrecords, size_t type_size, + const size_t *field_offset, const size_t *dst_sizes, void *buf); +H5_HLDLL herr_t H5TBread_fields_index(hid_t loc_id, const char *dset_name, hsize_t nfields, + const int *field_index, hsize_t start, hsize_t nrecords, + size_t type_size, const size_t *field_offset, const size_t *dst_sizes, + void *buf); -H5_HLDLL herr_t H5TBread_table( hid_t loc_id, - const char *dset_name, - size_t dst_size, - const size_t *dst_offset, - const size_t *dst_sizes, - void *dst_buf ); - - -H5_HLDLL herr_t H5TBread_fields_name( hid_t loc_id, - const char *dset_name, - const char *field_names, - hsize_t start, - hsize_t nrecords, - size_t type_size, - const size_t *field_offset, - const size_t *dst_sizes, - void *buf ); - -H5_HLDLL herr_t H5TBread_fields_index( hid_t loc_id, - const char *dset_name, - hsize_t nfields, - const int *field_index, - hsize_t start, - hsize_t nrecords, - size_t type_size, - const size_t *field_offset, - const size_t *dst_sizes, - void *buf ); - - -H5_HLDLL herr_t H5TBread_records( hid_t loc_id, - const char *dset_name, - hsize_t start, - hsize_t nrecords, - size_t type_size, - const size_t *dst_offset, - const size_t *dst_sizes, - void *buf ); +H5_HLDLL herr_t H5TBread_records(hid_t loc_id, const char *dset_name, hsize_t start, hsize_t nrecords, + size_t type_size, const size_t *dst_offset, const size_t *dst_sizes, + void *buf); /*------------------------------------------------------------------------- * @@ -144,19 +83,10 @@ H5_HLDLL herr_t H5TBread_records( hid_t loc_id, *------------------------------------------------------------------------- */ +H5_HLDLL herr_t H5TBget_table_info(hid_t loc_id, const char *dset_name, hsize_t *nfields, hsize_t *nrecords); -H5_HLDLL herr_t H5TBget_table_info ( hid_t loc_id, - const char *dset_name, - hsize_t *nfields, - hsize_t *nrecords ); - -H5_HLDLL herr_t H5TBget_field_info( hid_t loc_id, - const char *dset_name, - char *field_names[], - size_t *field_sizes, - size_t *field_offsets, - size_t *type_size ); - +H5_HLDLL herr_t H5TBget_field_info(hid_t loc_id, const char *dset_name, char *field_names[], + size_t *field_sizes, size_t *field_offsets, size_t *type_size); /*------------------------------------------------------------------------- * @@ -165,47 +95,22 @@ H5_HLDLL herr_t H5TBget_field_info( hid_t loc_id, *------------------------------------------------------------------------- */ +H5_HLDLL herr_t H5TBdelete_record(hid_t loc_id, const char *dset_name, hsize_t start, hsize_t nrecords); -H5_HLDLL herr_t H5TBdelete_record( hid_t loc_id, - const char *dset_name, - hsize_t start, - hsize_t nrecords ); - - -H5_HLDLL herr_t H5TBinsert_record( hid_t loc_id, - const char *dset_name, - hsize_t start, - hsize_t nrecords, - size_t dst_size, - const size_t *dst_offset, - const size_t *dst_sizes, - void *buf ); +H5_HLDLL herr_t H5TBinsert_record(hid_t loc_id, const char *dset_name, hsize_t start, hsize_t nrecords, + size_t dst_size, const size_t *dst_offset, const size_t *dst_sizes, + void *buf); -H5_HLDLL herr_t H5TBadd_records_from( hid_t loc_id, - const char *dset_name1, - hsize_t start1, - hsize_t nrecords, - const char *dset_name2, - hsize_t start2 ); +H5_HLDLL herr_t H5TBadd_records_from(hid_t loc_id, const char *dset_name1, hsize_t start1, hsize_t nrecords, + const char *dset_name2, hsize_t start2); -H5_HLDLL herr_t H5TBcombine_tables( hid_t loc_id1, - const char *dset_name1, - hid_t loc_id2, - const char *dset_name2, - const char *dset_name3 ); +H5_HLDLL herr_t H5TBcombine_tables(hid_t loc_id1, const char *dset_name1, hid_t loc_id2, + const char *dset_name2, const char *dset_name3); -H5_HLDLL herr_t H5TBinsert_field( hid_t loc_id, - const char *dset_name, - const char *field_name, - hid_t field_type, - hsize_t position, - const void *fill_data, - const void *buf ); - -H5_HLDLL herr_t H5TBdelete_field( hid_t loc_id, - const char *dset_name, - const char *field_name ); +H5_HLDLL herr_t H5TBinsert_field(hid_t loc_id, const char *dset_name, const char *field_name, + hid_t field_type, hsize_t position, const void *fill_data, const void *buf); +H5_HLDLL herr_t H5TBdelete_field(hid_t loc_id, const char *dset_name, const char *field_name); /*------------------------------------------------------------------------- * @@ -214,18 +119,12 @@ H5_HLDLL herr_t H5TBdelete_field( hid_t loc_id, *------------------------------------------------------------------------- */ -H5_HLDLL herr_t H5TBAget_title( hid_t loc_id, - char *table_title ); +H5_HLDLL herr_t H5TBAget_title(hid_t loc_id, char *table_title); -H5_HLDLL htri_t H5TBAget_fill(hid_t loc_id, - const char *dset_name, - hid_t dset_id, - unsigned char *dst_buf); +H5_HLDLL htri_t H5TBAget_fill(hid_t loc_id, const char *dset_name, hid_t dset_id, unsigned char *dst_buf); #ifdef __cplusplus } #endif - #endif - diff --git a/hl/src/Makefile.am b/hl/src/Makefile.am index ffbbe93..300b6af 100644 --- a/hl/src/Makefile.am +++ b/hl/src/Makefile.am @@ -6,7 +6,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. ## diff --git a/hl/src/Makefile.in b/hl/src/Makefile.in index c072226..609b35f 100644 --- a/hl/src/Makefile.in +++ b/hl/src/Makefile.in @@ -22,7 +22,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. # @@ -406,11 +406,11 @@ AMTAR = @AMTAR@ # AM_CFLAGS is an automake construct which should be used by Makefiles # instead of CFLAGS, as CFLAGS is reserved solely for the user to define. # This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well. -AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@ +AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@ @H5_ECFLAGS@ # Add include directories to the C preprocessor flags AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@ -I$(top_srcdir)/src -AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@ +AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@ @H5_ECXXFLAGS@ AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@ AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@ @@ -425,6 +425,7 @@ CC = @CC@ CCDEPMODE = @CCDEPMODE@ CC_VERSION = @CC_VERSION@ CFLAGS = @CFLAGS@ +CLANG_SANITIZE_CHECKS = @CLANG_SANITIZE_CHECKS@ CLEARFILEBUF = @CLEARFILEBUF@ CODESTACK = @CODESTACK@ CONFIG_DATE = @CONFIG_DATE@ @@ -443,6 +444,7 @@ DEFAULT_API_VERSION = @DEFAULT_API_VERSION@ DEFS = @DEFS@ DEPDIR = @DEPDIR@ DEPRECATED_SYMBOLS = @DEPRECATED_SYMBOLS@ +DEV_WARNINGS = @DEV_WARNINGS@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ DSYMUTIL = @DSYMUTIL@ @@ -470,6 +472,8 @@ GREP = @GREP@ H5_CFLAGS = @H5_CFLAGS@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ +H5_ECFLAGS = @H5_ECFLAGS@ +H5_ECXXFLAGS = @H5_ECXXFLAGS@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ H5_LDFLAGS = @H5_LDFLAGS@ @@ -477,9 +481,12 @@ H5_VERSION = @H5_VERSION@ HADDR_T = @HADDR_T@ HAVE_DMALLOC = @HAVE_DMALLOC@ HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@ +HAVE_LIBHDFS = @HAVE_LIBHDFS@ HAVE_PTHREAD = @HAVE_PTHREAD@ HDF5_HL = @HDF5_HL@ HDF5_INTERFACES = @HDF5_INTERFACES@ +HDF5_TESTS = @HDF5_TESTS@ +HDF5_TOOLS = @HDF5_TOOLS@ HDF_CXX = @HDF_CXX@ HDF_FORTRAN = @HDF_FORTRAN@ HDF_FORTRAN2003 = @HDF_FORTRAN2003@ @@ -495,6 +502,7 @@ INSTALL_SCRIPT = @INSTALL_SCRIPT@ INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@ INSTRUMENT = @INSTRUMENT@ INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@ +JNI_LDFLAGS = @JNI_LDFLAGS@ LD = @LD@ LDFLAGS = @LDFLAGS@ LIBOBJS = @LIBOBJS@ @@ -516,6 +524,7 @@ NMEDIT = @NMEDIT@ OBJDUMP = @OBJDUMP@ OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@ OBJEXT = @OBJEXT@ +OPTIMIZATION = @OPTIMIZATION@ OTOOL = @OTOOL@ OTOOL64 = @OTOOL64@ PACKAGE = @PACKAGE@ @@ -528,8 +537,10 @@ PACKAGE_VERSION = @PACKAGE_VERSION@ PARALLEL = @PARALLEL@ PATH_SEPARATOR = @PATH_SEPARATOR@ PERL = @PERL@ +PROFILING = @PROFILING@ RANLIB = @RANLIB@ ROOT = @ROOT@ +ROS3_VFD = @ROS3_VFD@ RUNPARALLEL = @RUNPARALLEL@ RUNSERIAL = @RUNSERIAL@ R_INTEGER = @R_INTEGER@ @@ -543,6 +554,7 @@ STATIC_EXEC = @STATIC_EXEC@ STATIC_SHARED = @STATIC_SHARED@ STRICT_FORMAT_CHECKS = @STRICT_FORMAT_CHECKS@ STRIP = @STRIP@ +SYMBOLS = @SYMBOLS@ TESTPARALLEL = @TESTPARALLEL@ THREADSAFE = @THREADSAFE@ TIME = @TIME@ @@ -584,6 +596,7 @@ docdir = $(exec_prefix)/doc dvidir = @dvidir@ enable_shared = @enable_shared@ enable_static = @enable_static@ +examplesdir = @examplesdir@ exec_prefix = @exec_prefix@ fortran_linux_linker_option = @fortran_linux_linker_option@ host = @host@ @@ -672,26 +685,26 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog *.clog2 # See libtool versioning documentation online. # After making changes, run bin/reconfigure to update other configure related # files like Makefile.in. -LT_VERS_INTERFACE = 13 -LT_VERS_REVISION = 2 -LT_VERS_AGE = 3 +LT_VERS_INTERFACE = 14 +LT_VERS_REVISION = 0 +LT_VERS_AGE = 4 LT_CXX_VERS_INTERFACE = 16 -LT_CXX_VERS_REVISION = 0 +LT_CXX_VERS_REVISION = 1 LT_CXX_VERS_AGE = 0 LT_F_VERS_INTERFACE = 10 -LT_F_VERS_REVISION = 6 +LT_F_VERS_REVISION = 7 LT_F_VERS_AGE = 0 LT_HL_VERS_INTERFACE = 12 -LT_HL_VERS_REVISION = 2 +LT_HL_VERS_REVISION = 3 LT_HL_VERS_AGE = 2 LT_HL_CXX_VERS_INTERFACE = 12 -LT_HL_CXX_VERS_REVISION = 2 +LT_HL_CXX_VERS_REVISION = 3 LT_HL_CXX_VERS_AGE = 1 LT_HL_F_VERS_INTERFACE = 10 -LT_HL_F_VERS_REVISION = 5 +LT_HL_F_VERS_REVISION = 6 LT_HL_F_VERS_AGE = 0 LT_TOOLS_VERS_INTERFACE = 10 -LT_TOOLS_VERS_REVISION = 7 +LT_TOOLS_VERS_REVISION = 8 LT_TOOLS_VERS_AGE = 0 # This library is our main target. @@ -709,11 +722,11 @@ libhdf5_hl_la_LIBADD = $(LIBHDF5) # Public header files (to be installed) include_HEADERS = hdf5_hl.h H5DOpublic.h H5IMpublic.h H5LTpublic.h H5TBpublic.h H5DSpublic.h H5PTpublic.h -# Automake needs to be taught how to build lib, dyn, progs, and tests targets. +# Automake needs to be taught how to build lib, progs and tests targets. # These will be filled in automatically for the most part (e.g., # lib_LIBRARIES are built for lib target), but EXTRA_LIB, EXTRA_PROG, and # EXTRA_TEST variables are supplied to allow the user to force targets to -# be built at certain times. +# be built at certain times. LIB = $(lib_LIBRARIES) $(lib_LTLIBRARIES) $(noinst_LIBRARIES) \ $(noinst_LTLIBRARIES) $(check_LIBRARIES) $(check_LTLIBRARIES) $(EXTRA_LIB) @@ -1235,6 +1248,7 @@ uninstall-am: uninstall-includeHEADERS uninstall-libLTLIBRARIES help: @$(top_srcdir)/bin/makehelp + # lib/progs/tests targets recurse into subdirectories. build-* targets # build files in this directory. build-lib: $(LIB) @@ -1270,7 +1284,7 @@ all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(chk_TESTS) # make install-doc doesn't do anything outside of doc directory, but # Makefiles should recognize it. # UPDATE: docs no longer reside in this build tree, so this target -# is depreciated. +# is deprecated. install-doc uninstall-doc: @echo "Nothing to be done." @@ -1431,7 +1445,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS) echo "**** Hint ****"; \ echo "Parallel test files reside in the current directory" \ "by default."; \ - echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \ echo " HDF5_PARAPREFIX=/PFS/user/me"; \ echo " export HDF5_PARAPREFIX"; \ echo " make check"; \ diff --git a/hl/src/hdf5_hl.h b/hl/src/hdf5_hl.h index ddf7ae8..bf92972 100644 --- a/hl/src/hdf5_hl.h +++ b/hl/src/hdf5_hl.h @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -28,4 +28,3 @@ #include "H5PTpublic.h" /* table */ #endif /*H5_INCLUDE_HL*/ - |