First stage of moving H5DOread/write_chunk() to src/ and making

them H5D calls.
* Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*.
* Moved the hl/test/test_dset_opt test to test/ and renamed to
  direct_chunk.
* Moved the hl/test/dectris_hl_perf test to tools/test/perform
  and renamed to direct_write_perf.
* Updated autotools and CMake files.

5 files changed, 2 insertions, 2868 deletions

diff --git a/hl/test/CMakeLists.txt b/hl/test/CMakeLists.txt
index 6b3c764..8a059a2 100644
--- a/hl/test/CMakeLists.txt
+++ b/hl/test/CMakeLists.txt
@@ -47,7 +47,6 @@ HL_ADD_EXE (test_image)
 HL_ADD_EXE (test_file_image)
 HL_ADD_EXE (test_table)
 HL_ADD_EXE (test_ds)
-HL_ADD_EXE (test_dset_opt)
 HL_ADD_EXE (test_ld)
 HL_ADD_EXE (test_dset_append)
 
diff --git a/hl/test/CMakeTests.cmake b/hl/test/CMakeTests.cmake
index e5eb58e..6f57a8c 100644
--- a/hl/test/CMakeTests.cmake
+++ b/hl/test/CMakeTests.cmake
@@ -90,7 +90,6 @@ add_test (
         test_ds8.h5
         test_ds9.h5
         test_ds10.h5
-        test_dectris.h5
         test_image1.h5
         test_image2.h5
         test_image3.h5
@@ -115,7 +114,6 @@ HL_add_test (test_file_image)
 HL_add_test (test_table)
 HL_add_test (test_ds)
 HL_add_test (test_packet)
-HL_add_test (test_dset_opt)
 HL_add_test (test_ld)
 HL_add_test (test_dset_append)
 
diff --git a/hl/test/Makefile.am b/hl/test/Makefile.am
index e16550f..35e680c 100644
--- a/hl/test/Makefile.am
+++ b/hl/test/Makefile.am
@@ -26,7 +26,7 @@ LDADD=$(LIBH5_HL) $(LIBH5TEST) $(LIBHDF5)
 
 # Test programs.  These are our main targets.  They should be listed in the
 # order to be executed, generally most specific tests to least specific tests.
-TEST_PROG=test_lite test_image test_file_image test_table test_ds test_packet test_dset_opt \
+TEST_PROG=test_lite test_image test_file_image test_table test_ds test_packet \
 	test_ld test_dset_append
 check_PROGRAMS=$(TEST_PROG)
 
@@ -45,8 +45,7 @@ endif
 CHECK_CLEANFILES+=combine_tables[1-2].h5 test_ds[1-9].h5 test_ds10.h5 \
 	test_image[1-3].h5 file_img[1-2].h5 test_lite[1-4].h5 test_table.h5 \
 	test_packet_table.h5 test_packet_compress.h5 test_detach.h5 \
-	test_packet_table_vlen.h5 testfl_packet_table_vlen.h5		\
-	test_dectris.h5 test_append.h5
+	test_packet_table_vlen.h5 testfl_packet_table_vlen.h5 test_append.h5
 
 # Sources for test_packet executable
 test_packet_SOURCES=test_packet.c test_packet_vlen.c
diff --git a/hl/test/dectris_hl_perf.c b/hl/test/dectris_hl_perf.c
deleted file mode 100644
index 13cfac8..0000000
--- a/hl/test/dectris_hl_perf.c
+++ /dev/null
@@ -1,691 +0,0 @@
-/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
- * Copyright by The HDF Group.                                               *
- * Copyright by the Board of Trustees of the University of Illinois.         *
- * All rights reserved.                                                      *
- *                                                                           *
- * This file is part of HDF5.  The full HDF5 copyright notice, including     *
- * terms governing use, modification, and redistribution, is contained in    *
- * the COPYING file, which can be found at the root of the source code       *
- * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.  *
- * If you do not have access to either file, you may request a copy from     *
- * help@hdfgroup.org.                                                        *
- * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
-
-/*
- * This test is for the DECTRIS project to the H5DOwrite_chunk function
- *
- */
-
-#include "hdf5_hl.h"
-
-#ifdef H5_HAVE_FILTER_DEFLATE
-#include <zlib.h>
-
-#if !defined(WIN32) && !defined(__MINGW32__)
-
-#include <math.h>
-
-#ifdef H5_STDC_HEADERS
-#   include <errno.h>
-#   include <fcntl.h>
-#   include <stdio.h>
-#   include <stdlib.h>
-#endif
-
-#ifdef H5_HAVE_UNISTD_H
-#   include <sys/types.h>
-#   include <unistd.h>
-#endif
-
-#ifdef H5_HAVE_SYS_STAT_H
-#   include <sys/stat.h>
-#endif
-
-#if defined(H5_TIME_WITH_SYS_TIME)
-#   include <sys/time.h>
-#   include <time.h>
-#elif defined(H5_HAVE_SYS_TIME_H)
-#   include <sys/time.h>
-#else
-#   include <time.h>
-#endif
-
-const char *FILENAME[] = {
-    "dectris_perf",
-    "unix.raw",
-    NULL
-};
-
-/*
- * Print the current location on the standard output stream.
- */
-#define FUNC __func__
-#define AT()     printf ("   at %s:%d in %s()...\n",        \
-        __FILE__, __LINE__, FUNC);
-#define H5_FAILED()  {puts("*FAILED*");fflush(stdout);}
-#define TEST_ERROR      {H5_FAILED(); AT(); goto error;}
-#define TESTING(WHAT)  {printf("Testing %-62s",WHAT); fflush(stdout);}
-#define PASSED()  {puts(" PASSED");fflush(stdout);}
-
-#define DIRECT_UNCOMPRESSED_DSET        "direct_uncompressed_dset"
-#define DIRECT_COMPRESSED_DSET        "direct_compressed_dset"
-#define REG_COMPRESSED_DSET       "reg_compressed_dset"
-#define REG_NO_COMPRESS_DSET   "reg_no_compress_dset"
-#define RANK         3
-#define NX     100
-#define NY     1000
-#define NZ     250
-#define CHUNK_NX     1 
-#define CHUNK_NY     1000
-#define CHUNK_NZ     250
-
-#define DEFLATE_SIZE_ADJUST(s) (ceil(((double)(s))*1.001)+12)
-char        filename[1024];
-unsigned int *outbuf[NX];
-size_t         data_size[NX];
-double       total_size = 0.0;
-unsigned int *direct_buf[NX];
-double       MB = 1048576.0;
-
-/*--------------------------------------------------
- * Function to report IO rate
- *--------------------------------------------------
- */
-void reportTime(struct timeval start, double mbytes)
-{
-    struct timeval timeval_stop,timeval_diff;
-
-    /*end timing*/
-    gettimeofday(&timeval_stop,NULL);
-
-    /* Calculate the elapsed gettimeofday time */
-    timeval_diff.tv_usec=timeval_stop.tv_usec-start.tv_usec;
-    timeval_diff.tv_sec=timeval_stop.tv_sec-start.tv_sec;
-
-    if(timeval_diff.tv_usec<0) {
-        timeval_diff.tv_usec+=1000000;
-        timeval_diff.tv_sec--;
-    } /* end if */
-
-/*printf("mbytes=%lf, sec=%lf, usec=%lf\n", mbytes, (double)timeval_diff.tv_sec, (double)timeval_diff.tv_usec);*/
-    printf("MBytes/second: %lf\n", (double)mbytes/((double)timeval_diff.tv_sec+((double)timeval_diff.tv_usec/(double)1000000.0)));        
-}
-
-/*--------------------------------------------------
- *  Create file, datasets, and initialize data
- *--------------------------------------------------
- */
-int create_file(hid_t fapl_id)
-{
-    hid_t       file;                          /* handles */
-    hid_t       fapl;
-    hid_t       cparms;
-    hid_t       dataspace, dataset;
-    hsize_t     dims[RANK]  = {NX, NY, NZ};        
-    hsize_t     chunk_dims[RANK] ={CHUNK_NX, CHUNK_NY, CHUNK_NZ};
-    unsigned int         aggression = 9;     /* Compression aggression setting */
-    int         ret;
-    int         i, j, n;
-
-    int flag;
-    int unix_file;
-
-    unsigned int *p;
-    size_t      buf_size = CHUNK_NY*CHUNK_NZ*sizeof(unsigned int);
-
-    const Bytef *z_src;
-    Bytef	    *z_dst;		/*destination buffer		*/
-    uLongf	     z_dst_nbytes = (uLongf)DEFLATE_SIZE_ADJUST(buf_size);
-    uLong	     z_src_nbytes = (uLong)buf_size;
-
-    TESTING("Create a file and dataset");
-
-    /*
-     * Create the data space with unlimited dimensions.
-     */
-    if((dataspace = H5Screate_simple(RANK, dims, NULL)) < 0)
-        TEST_ERROR;
-
-    /*
-     * Create a new file. If file exists its contents will be overwritten.
-     */
-    if((file = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_id)) < 0)
-        TEST_ERROR;
-
-    /*
-     * Modify dataset creation properties, i.e. enable chunking and compression
-     */
-    if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0)
-        TEST_ERROR;
-
-    if(H5Pset_chunk( cparms, RANK, chunk_dims) < 0)
-        TEST_ERROR;
-
-    /*
-     * Create a new dataset within the file using cparms
-     * creation properties.
-     */
-    if((dataset = H5Dcreate2(file, DIRECT_UNCOMPRESSED_DSET, H5T_NATIVE_INT, dataspace, H5P_DEFAULT,
-			cparms, H5P_DEFAULT)) < 0)
-        TEST_ERROR;
-
-    if(H5Dclose(dataset) < 0)
-        TEST_ERROR;
-
-    if((dataset = H5Dcreate2(file, REG_NO_COMPRESS_DSET, H5T_NATIVE_INT, dataspace, H5P_DEFAULT,
-			cparms, H5P_DEFAULT)) < 0)
-        TEST_ERROR;
-
-    if(H5Dclose(dataset) < 0)
-        TEST_ERROR;
-
-    /* Set compression */
-    if(H5Pset_deflate( cparms, aggression) < 0)
-        TEST_ERROR;
-
-    if((dataset = H5Dcreate2(file, DIRECT_COMPRESSED_DSET, H5T_NATIVE_INT, dataspace, H5P_DEFAULT,
-			cparms, H5P_DEFAULT)) < 0)
-        TEST_ERROR;
-
-    if(H5Dclose(dataset) < 0)
-        TEST_ERROR;
-
-
-    if((dataset = H5Dcreate2(file, REG_COMPRESSED_DSET, H5T_NATIVE_INT, dataspace, H5P_DEFAULT,
-			cparms, H5P_DEFAULT)) < 0)
-        TEST_ERROR;
-
-    if(H5Dclose(dataset) < 0)
-        TEST_ERROR;
-
-    if(H5Fclose(file) < 0) 
-        TEST_ERROR;
-
-    if(H5Sclose(dataspace) < 0)
-        TEST_ERROR;
-
-    if(H5Pclose(cparms) < 0)
-        TEST_ERROR;
-
-    /* create a unix file*/
-    flag = O_CREAT|O_TRUNC|O_WRONLY;
-
-    if ((unix_file=open(FILENAME[1],flag,S_IRWXU))== -1)
-        TEST_ERROR;
-
-    if (close(unix_file) < 0)
-    {
-        printf(" unable to close the file\n");
-        TEST_ERROR;
-    }
-
-
-    /* Initialize data for chunks */
-    for(i = 0; i < NX; i++) {
-	p = direct_buf[i] = (unsigned int*)malloc(CHUNK_NY*CHUNK_NZ*sizeof(unsigned int));
-        
-        for(j=0; j < CHUNK_NY*CHUNK_NZ; j++, p++)
-            *p = rand() % 65000;
-
-        z_src = (const Bytef*)direct_buf[i];
-
-        z_dst_nbytes = (uLongf)DEFLATE_SIZE_ADJUST(buf_size);
-        /* Allocate output (compressed) buffer */
-        outbuf[i] = (unsigned int*)malloc((size_t)z_dst_nbytes);
-        z_dst = (Bytef *)outbuf[i];
-
-        /* Perform compression from the source to the destination buffer */
-        ret = compress2(z_dst, &z_dst_nbytes, z_src, z_src_nbytes, aggression);
-
-        data_size[i] = (size_t)z_dst_nbytes;
-        total_size += data_size[i];
-
-        /* Check for various zlib errors */
-        if(Z_BUF_ERROR == ret) {
-            fprintf(stderr, "overflow");
-            TEST_ERROR;
-        } else if(Z_MEM_ERROR == ret) {
-	    fprintf(stderr, "deflate memory error");
-            TEST_ERROR;
-        } else if(Z_OK != ret) {
-	    fprintf(stderr, "other deflate error");
-            TEST_ERROR;
-        }
-    }
-
-
-    PASSED();
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(dataset);
-        H5Sclose(dataspace);
-        H5Pclose(cparms);
-        H5Fclose(file);
-    } H5E_END_TRY;
-    return 1;
-}
-
-/*--------------------------------------------------
- *  Benchmark the performance of the new function 
- *  with precompressed data.
- *--------------------------------------------------
- */
-int
-test_direct_write_uncompressed_data(hid_t fapl_id)
-{
-    hid_t       file;                          /* handles */
-    hid_t       dataspace, dataset;
-    hid_t       dxpl;
-    herr_t      status;
-    int         i;
-
-    unsigned    filter_mask = 0;
-    hsize_t     offset[RANK] = {0, 0, 0};
-
-    struct timeval timeval_start;    
-    
-    TESTING("H5DOwrite_chunk for uncompressed data");
-
-    if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-        TEST_ERROR;
-
-    /* Start the timer */
-    gettimeofday(&timeval_start,NULL);
-
-    /* Reopen the file and dataset */
-    if((file = H5Fopen(filename, H5F_ACC_RDWR, fapl_id)) < 0)
-        TEST_ERROR;
-
-    if((dataset = H5Dopen2(file, DIRECT_UNCOMPRESSED_DSET, H5P_DEFAULT)) < 0)
-        TEST_ERROR;
-
-
-    /* Write the compressed chunk data repeatedly to cover all the chunks in the 
-     * dataset, using the direct writing function.     */ 
-    for(i=0; i<NX; i++) {
-        status = H5DOwrite_chunk(dataset, dxpl, filter_mask, offset, CHUNK_NY*CHUNK_NZ*sizeof(unsigned int), direct_buf[i]);
-        (offset[0])++;
-    }
-
-    /*
-     * Close/release resources.
-     */
-    H5Dclose(dataset);
-    H5Pclose(dxpl);
-    H5Fclose(file);
-
-    /* Report the performance */ 
-    reportTime(timeval_start, (double)(NX*NY*NZ*sizeof(unsigned int)/MB));    
-
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(dataset);
-        H5Pclose(dxpl);
-        H5Fclose(file);
-    } H5E_END_TRY;
-    return 1;
-}
-
-
-/*--------------------------------------------------
- *  Benchmark the performance of the new function 
- *  with precompressed data.
- *--------------------------------------------------
- */
-int
-test_direct_write_compressed_data(hid_t fapl_id)
-{
-    hid_t       file;                          /* handles */
-    hid_t       dataspace, dataset;
-    hid_t       dxpl;
-    herr_t      status;
-    int         i;
-
-    unsigned    filter_mask = 0;
-    hsize_t     offset[RANK] = {0, 0, 0};
-
-    struct timeval timeval_start;    
-    
-    TESTING("H5DOwrite_chunk for pre-compressed data");
-
-    if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-        TEST_ERROR;
-
-    /* Start the timer */
-    gettimeofday(&timeval_start,NULL);
-
-    /* Reopen the file and dataset */
-    if((file = H5Fopen(filename, H5F_ACC_RDWR, fapl_id)) < 0)
-        TEST_ERROR;
-
-    if((dataset = H5Dopen2(file, DIRECT_COMPRESSED_DSET, H5P_DEFAULT)) < 0)
-        TEST_ERROR;
-
-
-    /* Write the compressed chunk data repeatedly to cover all the chunks in the 
-     * dataset, using the direct writing function.     */ 
-    for(i=0; i<NX; i++) {
-        status = H5DOwrite_chunk(dataset, dxpl, filter_mask, offset, data_size[i], outbuf[i]);
-        (offset[0])++;
-    }
-
-    /*
-     * Close/release resources.
-     */
-    H5Dclose(dataset);
-    H5Pclose(dxpl);
-    H5Fclose(file);
-  
-    /* Report the performance */ 
-    reportTime(timeval_start, (double)(total_size/MB));    
-
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(dataset);
-        H5Pclose(dxpl);
-        H5Fclose(file);
-    } H5E_END_TRY;
-    return 1;
-}
-
-/*--------------------------------------------------
- *  Benchmark the performance of the regular H5Dwrite
- *  with compression filter enabled.
- *--------------------------------------------------
- */
-int
-test_compressed_write(hid_t fapl_id)
-{
-    hid_t       file;                          /* handles */
-    hid_t       dataspace, dataset;
-    hid_t       mem_space;
-    hsize_t     chunk_dims[RANK] ={CHUNK_NX, CHUNK_NY, CHUNK_NZ};
-    hid_t       dxpl;
-    herr_t      status;
-    int         i;
-
-    hsize_t start[RANK];  /* Start of hyperslab */
-    hsize_t stride[RANK]; /* Stride of hyperslab */
-    hsize_t count[RANK];  /* Block count */
-    hsize_t block[RANK];  /* Block sizes */
-
-    struct timeval timeval_start;    
-
-    TESTING("H5Dwrite with compression enabled");
-
-    if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-        TEST_ERROR;
-
-    if((mem_space = H5Screate_simple(RANK, chunk_dims, NULL)) < 0)
-        TEST_ERROR;
-
-    /* Start the timer */
-    gettimeofday(&timeval_start,NULL);
-
-    /* Reopen the file and dataset */
-    if((file = H5Fopen(filename, H5F_ACC_RDWR, fapl_id)) < 0)
-        TEST_ERROR;
-
-    if((dataset = H5Dopen2(file, REG_COMPRESSED_DSET, H5P_DEFAULT)) < 0)
-        TEST_ERROR;
-
-    if((dataspace = H5Dget_space(dataset)) < 0)
-        TEST_ERROR;
-
-    start[0]  = start[1]  = start[2] = 0;
-    stride[0] = stride[1] = stride[2] = 1;
-    count[0]  = count[1]  = count[2] = 1;
-    block[0]  = CHUNK_NX; block[1]  = CHUNK_NY; block[2] = CHUNK_NZ;
-    
-    for(i=0; i<NX; i++) {
-        /*
-         * Select hyperslab for one chunk in the file
-         */
-        if((status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, start, stride, count, block)) < 0)
-            TEST_ERROR;
-        (start[0])++;        
-
-        if((status = H5Dwrite(dataset, H5T_NATIVE_INT, mem_space, dataspace,
-    		      H5P_DEFAULT, direct_buf[i])) < 0)
-            TEST_ERROR;
-    }
-
-    /*
-     * Close/release resources.
-     */
-    H5Dclose(dataset);
-    H5Sclose(dataspace);
-    H5Sclose(mem_space);
-    H5Pclose(dxpl);
-    H5Fclose(file);
- 
-    /* Report the performance */ 
-    reportTime(timeval_start, (double)(NX*NY*NZ*sizeof(unsigned int)/MB));    
-   
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(dataset);
-        H5Sclose(dataspace);
-        H5Sclose(mem_space);
-        H5Pclose(dxpl);
-        H5Fclose(file);
-    } H5E_END_TRY;
-    return 1;
-}
-
-/*--------------------------------------------------
- *  Benchmark the performance of the regular H5Dwrite
- *  with compression
- *--------------------------------------------------
- */
-int
-test_no_compress_write(hid_t fapl_id)
-{
-    hid_t       file;                          /* handles */
-    hid_t       dataspace, dataset;
-    hid_t       mem_space;
-    hsize_t     chunk_dims[RANK] ={CHUNK_NX, CHUNK_NY, CHUNK_NZ};
-    hid_t       dxpl;
-    herr_t      status;
-    int         i;
-
-    hsize_t start[RANK];  /* Start of hyperslab */
-    hsize_t stride[RANK]; /* Stride of hyperslab */
-    hsize_t count[RANK];  /* Block count */
-    hsize_t block[RANK];  /* Block sizes */
-
-    struct timeval timeval_start;    
-
-    TESTING("H5Dwrite without compression");
-
-    if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-        TEST_ERROR;
-
-    if((mem_space = H5Screate_simple(RANK, chunk_dims, NULL)) < 0)
-        TEST_ERROR;
-
-    /* Start the timer */
-    gettimeofday(&timeval_start,NULL);
-
-    /* Reopen the file and dataset */
-    if((file = H5Fopen(filename, H5F_ACC_RDWR, fapl_id)) < 0)
-        TEST_ERROR;
-
-    if((dataset = H5Dopen2(file, REG_NO_COMPRESS_DSET, H5P_DEFAULT)) < 0)
-        TEST_ERROR;
-
-    if((dataspace = H5Dget_space(dataset)) < 0)
-        TEST_ERROR;
-
-    start[0]  = start[1]  = start[2] = 0;
-    stride[0] = stride[1] = stride[2] = 1;
-    count[0]  = count[1]  = count[2] = 1;
-    block[0]  = CHUNK_NX; block[1]  = CHUNK_NY; block[2] = CHUNK_NZ;
-    
-    for(i=0; i<NX; i++) {
-        /*
-         * Select hyperslab for one chunk in the file
-         */
-        if((status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, start, stride, count, block)) < 0)
-            TEST_ERROR;
-        (start[0])++;        
-
-        if((status = H5Dwrite(dataset, H5T_NATIVE_INT, mem_space, dataspace,
-    		      H5P_DEFAULT, direct_buf[i])) < 0)
-            TEST_ERROR;
-    }
-
-    /*
-     * Close/release resources.
-     */
-    H5Dclose(dataset);
-    H5Sclose(dataspace);
-    H5Sclose(mem_space);
-    H5Pclose(dxpl);
-    H5Fclose(file);
- 
-    /* Report the performance */ 
-    reportTime(timeval_start, (double)(NX*NY*NZ*sizeof(unsigned int)/MB));    
-   
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(dataset);
-        H5Sclose(dataspace);
-        H5Sclose(mem_space);
-        H5Pclose(dxpl);
-        H5Fclose(file);
-    } H5E_END_TRY;
-    return 1;
-}
-
-/*--------------------------------------------------
- *  Benchmark the performance for writing compressed
- *  data to a Unix file
- *--------------------------------------------------
- */
-int 
-test_unix_write(void)
-{
-    int file, flag;
-    ssize_t op_size;    
-    int i;
-    struct timeval timeval_start;    
-
-    TESTING("Write compressed data to a Unix file");
-
-    /* create file*/
-    flag = O_WRONLY;
-
-    /* Start the timer */
-    gettimeofday(&timeval_start,NULL);
-
-    if ((file=open(FILENAME[1],flag))== -1)
-        TEST_ERROR;
-
-    /* Write the compressed chunk data repeatedly to cover all the chunks in the 
-     * dataset, using the direct writing function.     */ 
-    for(i=0; i<NX; i++) {
-        op_size = write(file, outbuf[i],data_size[i]);
-        if (op_size < 0)
-        {
-            printf(" Error in writing data to file because %s \n", strerror(errno));
-            TEST_ERROR;
-        }
-        else if (op_size == 0)
-        {
-            printf(" unable to write sufficent data to file because %s \n", strerror(errno));
-            TEST_ERROR;
-        }
-    }
-
-    if (close(file) < 0)
-    {
-        printf(" unable to close the file\n");
-        TEST_ERROR;
-    }
-
-    /* Report the performance */ 
-    reportTime(timeval_start, (double)(total_size/MB));    
-
-    PASSED();
-    return 0;
-
-error:
-    return 1; 
-}
-
-/*--------------------------------------------------
- *  Main function
- *--------------------------------------------------
- */
-int
-main (void)
-{
-    hid_t       fapl = H5P_DEFAULT;
-    int         i;
-
-    /* Testing setup */
-/*    h5_reset();
-    fapl = h5_fileaccess();
-
-    h5_fixname(FILENAME[0], fapl, filename, sizeof filename);*/
-
-    sprintf(filename, "%s.h5", FILENAME[0]);
-
-    create_file(fapl);
-    test_direct_write_uncompressed_data(fapl);
-    test_direct_write_compressed_data(fapl);
-    test_no_compress_write(fapl);
-    test_compressed_write(fapl);
-    test_unix_write();
-
-    for(i=0; i<NX; i++) {
-        free(outbuf[i]);
-        free(direct_buf[i]);
-    }
- 
-/*    h5_cleanup(FILENAME, fapl);*/
-    return 0;
-}
-
-#else /* WIN32 / MINGW32 */
-
-int
-main(void)
-{
-    printf("Non-POSIX platform. Exiting.\n");
-    return EXIT_FAILURE;
-} /* end main() */
-
-#endif /* WIN32 / MINGW32 */
-
-#else  /* !H5_HAVE_FILTER_DEFLATE */
-
-/*
- * Function:    main
- * Purpose:     Dummy main() function for if HDF5 was configured without
- *              zlib stuff.
- * Return:      EXIT_SUCCESS
- */
-int
-main(void)
-{
-    HDfprintf(stdout, "No compression IO performance because zlib was not configured\n");
-    return EXIT_SUCCESS;
-}
-
-#endif  /* !H5_HAVE_FILTER_DEFLATE */
-
diff --git a/hl/test/test_dset_opt.c b/hl/test/test_dset_opt.c
deleted file mode 100644
index ef4cf13..0000000
--- a/hl/test/test_dset_opt.c
+++ /dev/null
@@ -1,2171 +0,0 @@
-/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
-* Copyright by The HDF Group.                                               *
-* Copyright by the Board of Trustees of the University of Illinois.         *
-* All rights reserved.                                                      *
-*                                                                           *
-* This file is part of HDF5.  The full HDF5 copyright notice, including     *
-* terms governing use, modification, and redistribution, is contained in    *
- * the COPYING file, which can be found at the root of the source code       *
- * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.  *
- * If you do not have access to either file, you may request a copy from     *
- * help@hdfgroup.org.                                                        *
-* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
-
-#include <stdlib.h>
-#include <string.h>
-#include "h5hltest.h"
-#include "H5DOpublic.h"
-#include <math.h>
-
-#if defined(H5_HAVE_ZLIB_H) && !defined(H5_ZLIB_HEADER) 
-# define H5_ZLIB_HEADER "zlib.h"
-#endif
-#if defined(H5_ZLIB_HEADER)
-# include H5_ZLIB_HEADER /* "zlib.h" */
-#endif
-
-#define FILE_NAME "test_dectris.h5"
-
-/* Datasets for Direct Write tests */
-#define DATASETNAME1        "direct_write"
-#define DATASETNAME2        "skip_one_filter"
-#define DATASETNAME3        "skip_two_filters"
-#define DATASETNAME4        "data_conv"
-#define DATASETNAME5        "contiguous_dset"
-#define DATASETNAME6        "invalid_argue"
-#define DATASETNAME7        "overwrite_chunk"
-/* Datasets for Direct Read tests */
-#define DATASETNAME8        "disabled_chunk_cache"
-#define DATASETNAME9        "flush_chunk_cache"
-#define DATASETNAME10       "read_w_valid_cache"
-#define DATASETNAME11       "unallocated_chunk"
-#define DATASETNAME12       "unfiltered_data"
-
-#define RANK         2
-#define NX     16
-#define NY     16
-#define CHUNK_NX     4
-#define CHUNK_NY     4
-
-#define DEFLATE_SIZE_ADJUST(s) (HDceil(((double)(s))*H5_DOUBLE(1.001))+H5_DOUBLE(12.0))
-
-/* Temporary filter IDs used for testing */
-#define H5Z_FILTER_BOGUS1	305
-#define H5Z_FILTER_BOGUS2	306
-#define ADD_ON			7
-#define FACTOR			3
-
-/* Constants for the overwrite test */
-#define OVERWRITE_NDIMS         3
-#define OVERWRITE_CHUNK_NX      3
-#define OVERWRITE_CHUNK_2NX     6
-#define OVERWRITE_CHUNK_NY      2
-#define OVERWRITE_VALUE         42
-
-/* Defines used in test_single_chunk_latest() */
-#define FILE            "single_latest.h5"
-#define DATASET         "dataset"
-#define DIM0            4
-#define DIM1            32
-#define CHUNK0          DIM0
-#define CHUNK1          DIM1
-
-/* Local prototypes for filter functions */
-static size_t filter_bogus1(unsigned int flags, size_t cd_nelmts,
-    const unsigned int *cd_values, size_t nbytes, size_t *buf_size, void **buf);
-static size_t filter_bogus2(unsigned int flags, size_t cd_nelmts,
-    const unsigned int *cd_values, size_t nbytes, size_t *buf_size, void **buf);
-
-/* This message derives from H5Z */
-const H5Z_class2_t H5Z_BOGUS1[1] = {{
-    H5Z_CLASS_T_VERS,       /* H5Z_class_t version */
-    H5Z_FILTER_BOGUS1,		/* Filter id number		*/
-    1, 1,               /* Encoding and decoding enabled */
-    "bogus1",			/* Filter name for debugging	*/
-    NULL,                       /* The "can apply" callback     */
-    NULL,                       /* The "set local" callback     */
-    filter_bogus1,		/* The actual filter function	*/
-}};
-
-const H5Z_class2_t H5Z_BOGUS2[1] = {{
-    H5Z_CLASS_T_VERS,       /* H5Z_class_t version */
-    H5Z_FILTER_BOGUS2,		/* Filter id number		*/
-    1, 1,               /* Encoding and decoding enabled */
-    "bogus2",			/* Filter name for debugging	*/
-    NULL,                       /* The "can apply" callback     */
-    NULL,                       /* The "set local" callback     */
-    filter_bogus2,		/* The actual filter function	*/
-}};
-
-/*-------------------------------------------------------------------------
- * Function:	test_direct_chunk_write
- *
- * Purpose:	    Test the basic functionality of H5DOwrite_chunk
- *
- * Return:	    Success:	0
- *		        Failure:	1
- *
- * Programmer:  Raymond Lu	
- *              30 November 2012
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_FILTER_DEFLATE
-static int
-test_direct_chunk_write (hid_t file)
-{
-    hid_t       dataspace = -1, dataset = -1;
-    hid_t       mem_space = -1;
-    hid_t       cparms = -1, dxpl = -1;
-    hsize_t     dims[2]  = {NX, NY};        
-    hsize_t     maxdims[2] = {H5S_UNLIMITED, H5S_UNLIMITED};
-    hsize_t     chunk_dims[2] ={CHUNK_NX, CHUNK_NY};
-    herr_t      status;
-    int         ret;
-    int         data[NX][NY];
-    int         i, j, n;
-
-    unsigned    filter_mask = 0;
-    int         direct_buf[CHUNK_NX][CHUNK_NY];
-    int         check_chunk[CHUNK_NX][CHUNK_NY];
-    hsize_t     offset[2] = {0, 0};
-    size_t      buf_size = CHUNK_NX*CHUNK_NY*sizeof(int);
-
-    const Bytef *z_src = (const Bytef*)(direct_buf);
-    Bytef	    *z_dst = NULL;		    /*destination buffer		*/
-    uLongf	     z_dst_nbytes = (uLongf)DEFLATE_SIZE_ADJUST(buf_size);
-    uLong	     z_src_nbytes = (uLong)buf_size;
-    int          aggression = 9;        /* Compression aggression setting */
-    void	    *outbuf = NULL;         /* Pointer to new buffer */
-
-    hsize_t start[2];  /* Start of hyperslab */
-    hsize_t stride[2]; /* Stride of hyperslab */
-    hsize_t count[2];  /* Block count */
-    hsize_t block[2];  /* Block sizes */
-
-    TESTING("basic functionality of H5DOwrite_chunk");
-
-    /*
-     * Create the data space with unlimited dimensions.
-     */
-    if((dataspace = H5Screate_simple(RANK, dims, maxdims)) < 0)
-        goto error;
-
-    if((mem_space = H5Screate_simple(RANK, chunk_dims, NULL)) < 0)
-        goto error;
-
-    /*
-     * Modify dataset creation properties, i.e. enable chunking and compression
-     */
-    if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0)
-        goto error;
-
-    if((status = H5Pset_chunk( cparms, RANK, chunk_dims)) < 0)
-        goto error;
-
-    if((status = H5Pset_deflate( cparms, (unsigned) aggression)) < 0)
-        goto error;
-
-    /*
-     * Create a new dataset within the file using cparms
-     * creation properties.
-     */
-    if((dataset = H5Dcreate2(file, DATASETNAME1, H5T_NATIVE_INT, dataspace, H5P_DEFAULT,
-			cparms, H5P_DEFAULT)) < 0)
-        goto error;
-
-    /* Initialize the dataset */
-    for(i = n = 0; i < NX; i++)
-        for(j = 0; j < NY; j++)
-	    data[i][j] = n++;
-
-    if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-        goto error;
-
-    /*
-     * Write the data for the dataset.  It should stay in the chunk cache.
-     * It will be evicted from the cache by the H5DOwrite_chunk calls. 
-     */
-    if((status = H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
-		      dxpl, data)) < 0)
-        goto error;
-
-    /* Initialize data for one chunk */
-    for(i = n = 0; i < CHUNK_NX; i++)
-        for(j = 0; j < CHUNK_NY; j++)
-	    direct_buf[i][j] = n++;
-
-    /* Allocate output (compressed) buffer */
-    outbuf = HDmalloc(z_dst_nbytes);
-    z_dst = (Bytef *)outbuf;
-
-    /* Perform compression from the source to the destination buffer */
-    ret = compress2(z_dst, &z_dst_nbytes, z_src, z_src_nbytes, aggression);
-
-    /* Check for various zlib errors */
-    if(Z_BUF_ERROR == ret) {
-        HDfprintf(stderr, "overflow");
-        goto error;
-    } else if(Z_MEM_ERROR == ret) {
-        HDfprintf(stderr, "deflate memory error");
-        goto error;
-    } else if(Z_OK != ret) {
-        HDfprintf(stderr, "other deflate error");
-        goto error;
-    }
-
-    /* Write the compressed chunk data repeatedly to cover all the chunks in the 
-     * dataset, using the direct writing function.     */ 
-    for(i=0; i<NX/CHUNK_NX; i++) {
-        for(j=0; j<NY/CHUNK_NY; j++) {
-            status = H5DOwrite_chunk(dataset, dxpl, filter_mask, offset, z_dst_nbytes, outbuf);
-            offset[1] += CHUNK_NY;
-        }
-        offset[0] += CHUNK_NX;
-        offset[1] = 0;
-    }
-
-    if(outbuf)
-        HDfree(outbuf);
-
-    if(H5Fflush(dataset, H5F_SCOPE_LOCAL) < 0) 
-        goto error;
-
-    if(H5Dclose(dataset) < 0)
-        goto error;
-
-    if((dataset = H5Dopen2(file, DATASETNAME1, H5P_DEFAULT)) < 0)
-        goto error;
-
-    /*
-     * Select hyperslab for one chunk in the file
-     */
-    start[0]  = CHUNK_NX; start[1]  = CHUNK_NY;
-    stride[0] = 1; stride[1] = 1;
-    count[0]  = 1; count[1]  = 1;
-    block[0]  = CHUNK_NX; block[1]  = CHUNK_NY;
-    if((status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, start, stride, count, block)) < 0)
-        goto error;
-
-    /* Read the chunk back */
-    if((status = H5Dread(dataset, H5T_NATIVE_INT, mem_space, dataspace, H5P_DEFAULT, check_chunk)) < 0)
-        goto error;
-
-    /* Check that the values read are the same as the values written */
-    for(i = 0; i < CHUNK_NX; i++) {
-        for(j = 0; j < CHUNK_NY; j++) {
-            if(direct_buf[i][j] != check_chunk[i][j]) {
-                HDprintf("    1. Read different values than written.");
-                HDprintf("    At index %d,%d\n", i, j);
-                HDprintf("    direct_buf=%d, check_chunk=%d\n", direct_buf[i][j], check_chunk[i][j]); 
-                goto error;
-            }
-        }
-    }
-
-    /* Reinitialize different data for one chunk */
-    for(i = 0; i < CHUNK_NX; i++)
-        for(j = 0; j < CHUNK_NY; j++)
-	    direct_buf[i][j] = i + j;
-
-    /* Allocate output (compressed) buffer */
-    outbuf = HDmalloc(z_dst_nbytes);
-    z_dst = (Bytef *)outbuf;
-
-    /* Perform compression from the source to the destination buffer */
-    ret = compress2(z_dst, &z_dst_nbytes, z_src, z_src_nbytes, aggression);
-
-    /* Check for various zlib errors */
-    if(Z_BUF_ERROR == ret) {
-        HDfprintf(stderr, "overflow");
-        goto error;
-    } else if(Z_MEM_ERROR == ret) {
-        HDfprintf(stderr, "deflate memory error");
-        goto error;
-    } else if(Z_OK != ret) {
-        HDfprintf(stderr, "other deflate error");
-        goto error;
-    }
-
-    /* Rewrite the compressed chunk data repeatedly to cover all the chunks in the 
-     * dataset, using the direct writing function.     */ 
-    offset[0] = offset[1] = 0;
-    for(i=0; i<NX/CHUNK_NX; i++) {
-        for(j=0; j<NY/CHUNK_NY; j++) {
-            status = H5DOwrite_chunk(dataset, dxpl, filter_mask, offset, z_dst_nbytes, outbuf);
-            offset[1] += CHUNK_NY;
-        }
-        offset[0] += CHUNK_NX;
-        offset[1] = 0;
-    }
-
-    if(outbuf)
-        HDfree(outbuf);
-
-    if(H5Fflush(dataset, H5F_SCOPE_LOCAL) < 0) 
-        goto error;
-
-    if(H5Dclose(dataset) < 0)
-        goto error;
-
-    if((dataset = H5Dopen2(file, DATASETNAME1, H5P_DEFAULT)) < 0)
-        goto error;
-
-    /* Read the chunk back */
-    if((status = H5Dread(dataset, H5T_NATIVE_INT, mem_space, dataspace, H5P_DEFAULT, check_chunk)) < 0)
-        goto error;
-
-    /* Check that the values read are the same as the values written */
-    for(i = 0; i < CHUNK_NX; i++) {
-        for(j = 0; j < CHUNK_NY; j++) {
-            if(direct_buf[i][j] != check_chunk[i][j]) {
-                HDprintf("    2. Read different values than written.");
-                HDprintf("    At index %d,%d\n", i, j);
-                HDprintf("    direct_buf=%d, check_chunk=%d\n", direct_buf[i][j], check_chunk[i][j]); 
-                goto error;
-            }
-        }
-    }
-
-    /*
-     * Close/release resources.
-     */
-    H5Dclose(dataset);
-    H5Sclose(mem_space);
-    H5Sclose(dataspace);
-    H5Pclose(cparms);
-    H5Pclose(dxpl);
-    
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(dataset);
-        H5Sclose(mem_space);
-        H5Sclose(dataspace);
-        H5Pclose(cparms);
-        H5Pclose(dxpl);
-    } H5E_END_TRY;
-
-    if(outbuf)
-        HDfree(outbuf);
-
-    H5_FAILED();
-    return 1;
-} /* test_direct_chunk_write() */
-#endif /* H5_HAVE_FILTER_DEFLATE */
-
-/*-------------------------------------------------------------------------
- * Function:    test_direct_chunk_overwrite_data
- *
- * Purpose:     Test overwriting a chunk with new data.
- *
- * Return:      Success:    0
- *              Failure:    1
- *
- * Programmer:  Dana Robinson
- *              Spring 2017
- *
- *-------------------------------------------------------------------------
- */
-static int
-test_direct_chunk_overwrite_data(hid_t fid)
-{
-    size_t      buf_size = OVERWRITE_CHUNK_NX * OVERWRITE_CHUNK_NY * sizeof(int16_t);
-    int16_t     data_buf[OVERWRITE_CHUNK_NY][OVERWRITE_CHUNK_NX];
-    int16_t     overwrite_buf[OVERWRITE_CHUNK_NY][OVERWRITE_CHUNK_NX];
-    uint32_t    filter_mask = 0;
-    hid_t       tid = H5T_NATIVE_UINT16;
-    hid_t       dcpl_id = -1;
-    hid_t       sid = -1;
-    hid_t       did = -1;
-    uint16_t    fill_value = 0;
-    hsize_t     dset_dims[] = {1, OVERWRITE_CHUNK_NY, OVERWRITE_CHUNK_2NX};
-    hsize_t     dset_max_dims[] = {H5S_UNLIMITED, OVERWRITE_CHUNK_NY, OVERWRITE_CHUNK_2NX};
-    hsize_t     chunk_dims[] = {1, OVERWRITE_CHUNK_NY, OVERWRITE_CHUNK_NX};
-    hsize_t     offset[] = {0, 0, 0};
-    hsize_t     i, j;
-    int16_t     n;
-    int16_t     read_buf[OVERWRITE_CHUNK_NY][OVERWRITE_CHUNK_2NX];
-
-    TESTING("overwriting existing data with H5DOwrite_chunk");
-
-    /* Create the dataset's data space */
-    if ((sid = H5Screate_simple(OVERWRITE_NDIMS, dset_dims, dset_max_dims)) < 0)
-        FAIL_STACK_ERROR
-
-    /* Set chunk size and filll value */
-    if ((dcpl_id = H5Pcreate(H5P_DATASET_CREATE)) < 0)
-        FAIL_STACK_ERROR
-    if (H5Pset_fill_value(dcpl_id, tid, &fill_value) < 0)
-        FAIL_STACK_ERROR
-    if (H5Pset_chunk(dcpl_id, OVERWRITE_NDIMS, chunk_dims) < 0)
-        FAIL_STACK_ERROR
-
-    /* Create dataset */
-    if ((did = H5Dcreate2(fid, DATASETNAME7, tid, sid, H5P_DEFAULT, dcpl_id, H5P_DEFAULT)) < 0)
-        FAIL_STACK_ERROR
-
-    /* Initialize data buffers */
-    n = 0;
-    for (i = 0; i < OVERWRITE_CHUNK_NY; i++) {
-        for (j = 0; j < OVERWRITE_CHUNK_NX; j++) {
-            data_buf[i][j] = n++;
-            overwrite_buf[i][j] = OVERWRITE_VALUE;
-        }
-    }
-
-    /* Write chunk data using the direct write function. */
-    if (H5DOwrite_chunk(did, H5P_DEFAULT, filter_mask, offset, buf_size, data_buf) < 0)
-        FAIL_STACK_ERROR
-
-    /* Write second chunk. */
-    offset[2] = OVERWRITE_CHUNK_NX;
-    if (H5DOwrite_chunk(did, H5P_DEFAULT, filter_mask, offset, buf_size, data_buf) < 0)
-        FAIL_STACK_ERROR
-
-    /* Overwrite first chunk. */
-    offset[2] = 0;
-    if (H5DOwrite_chunk(did, H5P_DEFAULT, filter_mask, offset, buf_size, overwrite_buf) < 0)
-        FAIL_STACK_ERROR
-
-    /* Read the data back out */
-    if (H5Dread(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, read_buf) < 0)
-        FAIL_STACK_ERROR
-
-    /* Ensure that the data are correct in chunk 1 */
-    for (i = 0; i < OVERWRITE_CHUNK_NY; i++)
-        for (j = 0; j < OVERWRITE_CHUNK_NX; j++) {
-            if (read_buf[i][j] != OVERWRITE_VALUE)
-                TEST_ERROR
-        }
-
-    if (H5Pclose(dcpl_id) < 0)
-        FAIL_STACK_ERROR
-    if (H5Sclose(sid) < 0)
-        FAIL_STACK_ERROR
-    if (H5Dclose(did) < 0)
-        FAIL_STACK_ERROR
-
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Pclose(dcpl_id);
-        H5Sclose(sid);
-        H5Dclose(did);
-    } H5E_END_TRY;
-
-    H5_FAILED();
-    return 1;
-} /* end test_direct_chunk_overwrite_data() */
-
-/*-------------------------------------------------------------------------
- * Function:	test_skip_compress_write1
- *
- * Purpose:	Test skipping compression filter when it is the only filter
- *              for the dataset
- *
- * Return:	Success:	0
- *		    Failure:	1
- *
- * Programmer:  Raymond Lu	
- *              30 November 2012
- *
- *-------------------------------------------------------------------------
- */
-static int
-test_skip_compress_write1(hid_t file)
-{
-    hid_t       dataspace = -1, dataset = -1;
-    hid_t       mem_space = -1;
-    hid_t       cparms = -1, dxpl = -1;
-    hsize_t     dims[2]  = {NX, NY};
-    hsize_t     maxdims[2] = {H5S_UNLIMITED, H5S_UNLIMITED};
-    hsize_t     chunk_dims[2] ={CHUNK_NX, CHUNK_NY};
-    herr_t      status;
-    int         i, j, n;
-
-    unsigned    filter_mask = 0;
-    int         direct_buf[CHUNK_NX][CHUNK_NY];
-    int         check_chunk[CHUNK_NX][CHUNK_NY];
-    hsize_t     offset[2] = {0, 0};
-    size_t      buf_size = CHUNK_NX*CHUNK_NY*sizeof(int);
-    int         aggression = 9;     /* Compression aggression setting */
-
-    unsigned    read_filter_mask = 0; /* filter mask after direct read */
-    int         read_direct_buf[CHUNK_NX][CHUNK_NY];
-    hsize_t     read_buf_size = 0; /* buf size */
-
-    hsize_t start[2];  /* Start of hyperslab */
-    hsize_t stride[2]; /* Stride of hyperslab */
-    hsize_t count[2];  /* Block count */
-    hsize_t block[2];  /* Block sizes */
-
-    TESTING("skipping compression filter for H5DOwrite_chunk/H5DOread_chunk");
-
-    /*
-     * Create the data space with unlimited dimensions.
-     */
-    if((dataspace = H5Screate_simple(RANK, dims, maxdims)) < 0)
-        goto error;
-
-    if((mem_space = H5Screate_simple(RANK, chunk_dims, NULL)) < 0)
-        goto error;
-
-    /*
-     * Modify dataset creation properties, i.e. enable chunking and compression
-     */
-    if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0)
-        goto error;
-
-    if((status = H5Pset_chunk( cparms, RANK, chunk_dims)) < 0)
-        goto error;
-
-    if((status = H5Pset_deflate( cparms, (unsigned ) aggression)) < 0)
-        goto error;
-
-    /*
-     * Create a new dataset within the file using cparms
-     * creation properties.
-     */
-    if((dataset = H5Dcreate2(file, DATASETNAME2, H5T_NATIVE_INT, dataspace, H5P_DEFAULT,
-			cparms, H5P_DEFAULT)) < 0)
-        goto error;
-
-    if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-        goto error;
-
-    /* Initialize data for one chunk */
-    for(i = n = 0; i < CHUNK_NX; i++)
-        for(j = 0; j < CHUNK_NY; j++) {
-            direct_buf[i][j] = n++;
-    }
-
-    /* write the uncompressed chunk data repeatedly to dataset, using the direct writing function.
-     * Indicate skipping the compression filter.     */
-    offset[0] = CHUNK_NX;
-    offset[1] = CHUNK_NY;
-
-    filter_mask = 0x00000001;
-
-    if((status = H5DOwrite_chunk(dataset, dxpl, filter_mask, offset, buf_size, direct_buf)) < 0)
-        goto error;
-
-    if(H5Fflush(dataset, H5F_SCOPE_LOCAL) < 0)
-        goto error;
-
-    if(H5Dclose(dataset) < 0)
-        goto error;
-
-    if((dataset = H5Dopen2(file, DATASETNAME2, H5P_DEFAULT)) < 0)
-        goto error;
-
-    /*
-     * Select hyperslab for the chunk just written in the file
-     */
-    start[0]  = CHUNK_NX; start[1]  = CHUNK_NY;
-    stride[0] = 1; stride[1] = 1;
-    count[0]  = 1; count[1]  = 1;
-    block[0]  = CHUNK_NX; block[1]  = CHUNK_NY;
-    if((status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, start, stride, count, block)) < 0)
-        goto error;
-
-    /* Read the chunk back */
-    if((status = H5Dread(dataset, H5T_NATIVE_INT, mem_space, dataspace, H5P_DEFAULT, check_chunk)) < 0)
-        goto error;
-
-    /* Check that the values read are the same as the values written */
-    for(i = 0; i < CHUNK_NX; i++) {
-        for(j = 0; j < CHUNK_NY; j++) {
-            if(direct_buf[i][j] != check_chunk[i][j]) {
-                HDprintf("    1. Read different values than written.");
-                HDprintf("    At index %d,%d\n", i, j);
-                HDprintf("    direct_buf=%d, check_chunk=%d\n", direct_buf[i][j], check_chunk[i][j]);
-                goto error;
-            }
-        }
-    }
-
-    /* Query chunk storage size */
-    if((status = H5Dget_chunk_storage_size(dataset, offset, &read_buf_size)) < 0)
-        goto error;
-    if(read_buf_size != buf_size)
-        goto error;
-
-    /* Read the raw chunk back */
-    HDmemset(&read_direct_buf, 0, sizeof(read_direct_buf));
-    if((status = H5DOread_chunk(dataset, H5P_DEFAULT, offset, &read_filter_mask, read_direct_buf)) < 0)
-        goto error;
-    if(read_filter_mask != filter_mask)
-        goto error;
-
-    /* Check that the direct chunk read is the same as the chunk written */
-    for(i = 0; i < CHUNK_NX; i++) {
-        for(j = 0; j < CHUNK_NY; j++) {
-            if(direct_buf[i][j] != read_direct_buf[i][j]) {
-                HDprintf("    1. Read different values than written.");
-                HDprintf("    At index %d,%d\n", i, j);
-                HDprintf("    direct_buf=%d, read_direct_buf=%d\n", direct_buf[i][j], read_direct_buf[i][j]);
-                goto error;
-            }
-        }
-    }
-
-    /*
-     * Close/release resources.
-     */
-    H5Dclose(dataset);
-    H5Sclose(mem_space);
-    H5Sclose(dataspace);
-    H5Pclose(cparms);
-    H5Pclose(dxpl);
-
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(dataset);
-        H5Sclose(mem_space);
-        H5Sclose(dataspace);
-        H5Pclose(cparms);
-        H5Pclose(dxpl);
-    } H5E_END_TRY;
-
-    H5_FAILED();
-    return 1;
-} /* test_skip_compress_write1() */
-
-/*-------------------------------------------------------------------------
- * Function:	filter_bogus1
- *
- * Purpose:	    A bogus filter that adds ADD_ON to the original value
- *
- * Return:	    Success:	Data chunk size
- *
- * Programmer:  Raymond Lu	
- *              30 November 2012
- *
- *-------------------------------------------------------------------------
- */
-static size_t
-filter_bogus1(unsigned int flags, size_t H5_ATTR_UNUSED cd_nelmts,
-      const unsigned int H5_ATTR_UNUSED *cd_values, size_t nbytes,
-      size_t *buf_size, void **buf)
-{
-    int *int_ptr=(int *)*buf;          /* Pointer to the data values */
-    ssize_t buf_left=(ssize_t)*buf_size;  /* Amount of data buffer left to process */
-
-    if(flags & H5Z_FLAG_REVERSE) { /* read */
-        /* Substract the "add on" value to all the data values */
-        while(buf_left>0) {
-            *int_ptr++ -= (int)ADD_ON;
-            buf_left -= (ssize_t)sizeof(int);
-        } /* end while */
-    } /* end if */
-    else { /* write */
-        /* Add the "add on" value to all the data values */
-        while(buf_left>0) {
-            *int_ptr++ += (int)ADD_ON;
-            buf_left -= (ssize_t)sizeof(int);
-        } /* end while */
-    } /* end else */
-
-    return nbytes;
-} /* filter_bogus1() */
-
-/*-------------------------------------------------------------------------
- * Function:	filter_bogus2
- *
- * Purpose:	A bogus filter that multiplies the original value by FACTOR.
- *
- * Return:	Success:	Data chunk size
- *
- * Programmer:  Raymond Lu	
- *              30 November 2012
- *-------------------------------------------------------------------------
- */
-static size_t
-filter_bogus2(unsigned int flags, size_t H5_ATTR_UNUSED cd_nelmts,
-      const unsigned int H5_ATTR_UNUSED *cd_values, size_t nbytes,
-      size_t *buf_size, void **buf)
-{
-    int *int_ptr=(int *)*buf;          /* Pointer to the data values */
-    ssize_t buf_left=(ssize_t)*buf_size;  /* Amount of data buffer left to process */
-
-    if(flags & H5Z_FLAG_REVERSE) { /* read */
-        /* Substract the "add on" value to all the data values */
-        while(buf_left>0) {
-            *int_ptr++ /= (int)FACTOR;
-            buf_left -= (ssize_t)sizeof(int);
-        } /* end while */
-    } /* end if */
-    else { /* write */
-        /* Add the "add on" value to all the data values */
-        while(buf_left>0) {
-            *int_ptr++ *= (int)FACTOR;
-            buf_left -= (ssize_t)sizeof(int);
-        } /* end while */
-    } /* end else */
-
-    return nbytes;
-} /* filter_bogus2() */
-
-/*-------------------------------------------------------------------------
- * Function:	test_skip_compress_write2
- *
- * Purpose:	Test skipping compression filter when there are three filters
- *              for the dataset
- *
- * Return:	Success:	0
- *		    Failure:	1
- *
- * Programmer:  Raymond Lu	
- *              30 November 2012
- *
- *-------------------------------------------------------------------------
- */
-static int
-test_skip_compress_write2(hid_t file)
-{
-    hid_t       dataspace = -1, dataset = -1;
-    hid_t       mem_space = -1;
-    hid_t       cparms = -1, dxpl = -1;
-    hsize_t     dims[2]  = {NX, NY};
-    hsize_t     maxdims[2] = {H5S_UNLIMITED, H5S_UNLIMITED};
-    hsize_t     chunk_dims[2] ={CHUNK_NX, CHUNK_NY};
-    herr_t      status;
-    int         i, j, n;
-
-    unsigned    filter_mask = 0;    /* orig filter mask */
-    int         origin_direct_buf[CHUNK_NX][CHUNK_NY];
-    int         direct_buf[CHUNK_NX][CHUNK_NY];
-    int         check_chunk[CHUNK_NX][CHUNK_NY];
-    hsize_t     offset[2] = {0, 0};
-    size_t      buf_size = CHUNK_NX*CHUNK_NY*sizeof(int);
-    int         aggression = 9;     /* Compression aggression setting */
-
-    unsigned    read_filter_mask = 0;   /* filter mask after direct read */
-    int         read_direct_buf[CHUNK_NX][CHUNK_NY];
-    hsize_t     read_buf_size = 0;  /* buf size */
-
-    hsize_t start[2];   /* Start of hyperslab */
-    hsize_t stride[2];  /* Stride of hyperslab */
-    hsize_t count[2];   /* Block count */
-    hsize_t block[2];   /* Block sizes */
-
-    TESTING("skipping compression filters but keep two other filters");
-
-    /*
-     * Create the data space with unlimited dimensions.
-     */
-    if((dataspace = H5Screate_simple(RANK, dims, maxdims)) < 0)
-        goto error;
-
-    if((mem_space = H5Screate_simple(RANK, chunk_dims, NULL)) < 0)
-        goto error;
-
-    /*
-     * Modify dataset creation properties, i.e. enable chunking and compression.
-     * The order of filters is bogus 1 + deflate + bogus 2.
-     */
-    if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0)
-        goto error;
-
-    if((status = H5Pset_chunk( cparms, RANK, chunk_dims)) < 0)
-        goto error;
-
-    /* Register and enable first bogus filter */
-    if(H5Zregister (H5Z_BOGUS1) < 0)
-        goto error;
-
-    if(H5Pset_filter(cparms, H5Z_FILTER_BOGUS1, 0, (size_t)0, NULL) < 0)
-        goto error;
-
-    /* Enable compression filter */
-    if((status = H5Pset_deflate( cparms, (unsigned) aggression)) < 0)
-        goto error;
-
-    /* Register and enable second bogus filter */
-    if(H5Zregister (H5Z_BOGUS2) < 0)
-        goto error;
-
-    if(H5Pset_filter(cparms, H5Z_FILTER_BOGUS2, 0, (size_t)0, NULL) < 0)
-        goto error;
-
-    /*
-     * Create a new dataset within the file using cparms
-     * creation properties.
-     */
-    if((dataset = H5Dcreate2(file, DATASETNAME3, H5T_NATIVE_INT, dataspace, H5P_DEFAULT,
-			cparms, H5P_DEFAULT)) < 0)
-        goto error;
-
-    if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-        goto error;
-
-    /* Initialize data for one chunk. Apply operations of two bogus filters to the chunk */
-    for(i = n = 0; i < CHUNK_NX; i++)
-        for(j = 0; j < CHUNK_NY; j++) {
-            origin_direct_buf[i][j] = n++;
-            direct_buf[i][j] = (origin_direct_buf[i][j] + ADD_ON) * FACTOR;
-        }
-
-    /* write the uncompressed chunk data repeatedly to dataset, using the direct writing function.
-     * Indicate skipping the compression filter but keep the other two bogus filters */
-    offset[0] = CHUNK_NX;
-    offset[1] = CHUNK_NY;
-
-    /* compression filter is the middle one to be skipped */
-    filter_mask = 0x00000002;
-
-    if((status = H5DOwrite_chunk(dataset, dxpl, filter_mask, offset, buf_size, direct_buf)) < 0)
-        goto error;
-
-    if(H5Fflush(dataset, H5F_SCOPE_LOCAL) < 0)
-        goto error;
-
-    if(H5Dclose(dataset) < 0)
-        goto error;
-
-    if((dataset = H5Dopen2(file, DATASETNAME3, H5P_DEFAULT)) < 0)
-        goto error;
-
-    /*
-     * Select hyperslab for one chunk in the file
-     */
-    start[0]  = CHUNK_NX; start[1]  = CHUNK_NY;
-    stride[0] = 1; stride[1] = 1;
-    count[0]  = 1; count[1]  = 1;
-    block[0]  = CHUNK_NX; block[1]  = CHUNK_NY;
-    if((status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, start, stride, count, block)) < 0)
-        goto error;
-
-    /* Read the chunk back */
-    if((status = H5Dread(dataset, H5T_NATIVE_INT, mem_space, dataspace, H5P_DEFAULT, check_chunk)) < 0)
-        goto error;
-
-    /* Check that the values read are the same as the values written */
-    for(i = 0; i < CHUNK_NX; i++) {
-        for(j = 0; j < CHUNK_NY; j++) {
-            if(origin_direct_buf[i][j] != check_chunk[i][j]) {
-                HDprintf("    1. Read different values than written.");
-                HDprintf("    At index %d,%d\n", i, j);
-                HDprintf("    origin_direct_buf=%d, check_chunk=%d\n", origin_direct_buf[i][j], check_chunk[i][j]);
-                goto error;
-            }
-        }
-    }
-
-    /* Query chunk storage size */
-    if((status = H5Dget_chunk_storage_size(dataset, offset, &read_buf_size)) < 0)
-        goto error;
-    if(read_buf_size != buf_size)
-        goto error;
-
-    /* Read the raw chunk back */
-    HDmemset(&read_direct_buf, 0, sizeof(read_direct_buf));
-    if((status = H5DOread_chunk(dataset, H5P_DEFAULT, offset, &read_filter_mask, read_direct_buf)) < 0)
-        goto error;
-    if(read_filter_mask != filter_mask)
-        goto error;
-
-    /* Check that the direct chunk read is the same as the chunk written */
-    for(i = 0; i < CHUNK_NX; i++) {
-        for(j = 0; j < CHUNK_NY; j++) {
-            if(direct_buf[i][j] != read_direct_buf[i][j]) {
-                HDprintf("    1. Read different values than written.");
-                HDprintf("    At index %d,%d\n", i, j);
-                HDprintf("    direct_buf=%d, read_direct_buf=%d\n", direct_buf[i][j], read_direct_buf[i][j]);
-                goto error;
-            }
-        }
-    }
-
-    /*
-     * Close/release resources.
-     */
-    H5Dclose(dataset);
-    H5Sclose(mem_space);
-    H5Sclose(dataspace);
-    H5Pclose(cparms);
-    H5Pclose(dxpl);
-
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(dataset);
-        H5Sclose(mem_space);
-        H5Sclose(dataspace);
-        H5Pclose(cparms);
-        H5Pclose(dxpl);
-    } H5E_END_TRY;
-
-    H5_FAILED();
-    return 1;
-} /* test_skip_compress_write2() */
-
-/*-------------------------------------------------------------------------
- * Function:	test_data_conv
- *
- * Purpose:	Test data conversion
- *
- * Return:	Success:	0
- *		    Failure:	1
- *
- * Programmer:  Raymond Lu	
- *              30 November 2012
- *
- *-------------------------------------------------------------------------
- */
-static int
-test_data_conv(hid_t file)
-{
-    typedef struct {
-        int a, b, c[4], d, e;
-    } src_type_t;
-    typedef struct {
-        int a,    c[4],    e;
-    } dst_type_t;
-
-    hid_t       dataspace = -1, dataset = -1;
-    hid_t       mem_space = -1;
-    hid_t       cparms = -1, dxpl = -1;
-    hsize_t     dims[2]  = {NX, NY};        
-    hsize_t     maxdims[2] = {H5S_UNLIMITED, H5S_UNLIMITED};
-    hsize_t     chunk_dims[2] ={CHUNK_NX, CHUNK_NY};
-    herr_t      status;
-    int         i, j, n;
-    const hsize_t	four = 4;
-    hid_t	st=-1, dt=-1;
-    hid_t       array_dt;
-
-    unsigned    filter_mask = 0;
-    src_type_t  direct_buf[CHUNK_NX][CHUNK_NY];
-    dst_type_t  check_chunk[CHUNK_NX][CHUNK_NY];
-    src_type_t  read_chunk[CHUNK_NX][CHUNK_NY];       /* For H5DOread_chunk */
-
-    hsize_t     offset[2] = {0, 0};
-    size_t      buf_size = CHUNK_NX*CHUNK_NY*sizeof(src_type_t);
-
-    hsize_t start[2];  /* Start of hyperslab */
-    hsize_t stride[2]; /* Stride of hyperslab */
-    hsize_t count[2];  /* Block count */
-    hsize_t block[2];  /* Block sizes */
-
-    TESTING("data conversion for H5DOwrite_chunk/H5DOread_chunk");
-
-    /*
-     * Create the data space with unlimited dimensions.
-     */
-    if((dataspace = H5Screate_simple(RANK, dims, maxdims)) < 0)
-        goto error;
-
-    if((mem_space = H5Screate_simple(RANK, chunk_dims, NULL)) < 0)
-        goto error;
-
-    /*
-     * Modify dataset creation properties, i.e. enable chunking
-     */
-    if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0)
-        goto error;
-
-    if((status = H5Pset_chunk( cparms, RANK, chunk_dims)) < 0)
-        goto error;
-
-    /* Build hdf5 datatypes */
-    array_dt = H5Tarray_create2(H5T_NATIVE_INT, 1, &four);
-    if((st = H5Tcreate(H5T_COMPOUND, sizeof(src_type_t))) < 0 ||
-            H5Tinsert(st, "a", HOFFSET(src_type_t, a), H5T_NATIVE_INT) < 0 ||
-            H5Tinsert(st, "b", HOFFSET(src_type_t, b), H5T_NATIVE_INT) < 0 ||
-            H5Tinsert(st, "c", HOFFSET(src_type_t, c), array_dt) < 0 ||
-            H5Tinsert(st, "d", HOFFSET(src_type_t, d), H5T_NATIVE_INT) < 0 ||
-            H5Tinsert(st, "e", HOFFSET(src_type_t, e), H5T_NATIVE_INT) < 0)
-        goto error;
-
-    if(H5Tclose(array_dt) < 0)
-        goto error;
-
-    array_dt = H5Tarray_create2(H5T_NATIVE_INT, 1, &four);
-    if((dt = H5Tcreate(H5T_COMPOUND, sizeof(dst_type_t))) < 0 ||
-            H5Tinsert(dt, "a", HOFFSET(dst_type_t, a), H5T_NATIVE_INT) < 0 ||
-            H5Tinsert(dt, "c", HOFFSET(dst_type_t, c), array_dt) < 0 ||
-            H5Tinsert(dt, "e", HOFFSET(dst_type_t, e), H5T_NATIVE_INT) < 0)
-        goto error;
-
-    if(H5Tclose(array_dt) < 0)
-        goto error;
-
-    /*
-     * Create a new dataset within the file using cparms
-     * creation properties.
-     */
-    if((dataset = H5Dcreate2(file, DATASETNAME4, st, dataspace, H5P_DEFAULT,
-			cparms, H5P_DEFAULT)) < 0)
-        goto error;
-
-    if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-        goto error;
-
-    /* Initialize data for one chunk */
-    for(i = n = 0; i < CHUNK_NX; i++) {
-        for(j = 0; j < CHUNK_NY; j++) {
-            (direct_buf[i][j]).a    = i*j+0;
-            (direct_buf[i][j]).b    = i*j+1;
-            (direct_buf[i][j]).c[0] = i*j+2;
-            (direct_buf[i][j]).c[1] = i*j+3;
-            (direct_buf[i][j]).c[2] = i*j+4;
-            (direct_buf[i][j]).c[3] = i*j+5;
-            (direct_buf[i][j]).d    = i*j+6;
-            (direct_buf[i][j]).e    = i*j+7;
-        }
-    }
-
-    /* write the chunk data to dataset, using the direct writing function. 
-     * There should be no data conversion involved. */
-    offset[0] = CHUNK_NX;
-    offset[1] = CHUNK_NY;
-
-    if((status = H5DOwrite_chunk(dataset, dxpl, filter_mask, offset, buf_size, direct_buf)) < 0)
-        goto error;
-
-    if(H5Fflush(dataset, H5F_SCOPE_LOCAL) < 0) 
-        goto error;
-
-    if(H5Dclose(dataset) < 0)
-        goto error;
-
-    if((dataset = H5Dopen2(file, DATASETNAME4, H5P_DEFAULT)) < 0)
-        goto error;
-
-    /* Use H5DOread_chunk() to read the uncompressed data */
-    if((status = H5DOread_chunk(dataset, dxpl, offset, &filter_mask, read_chunk)) < 0)
-        goto error;
-
-    /* Check that the values read are the same as the values written */
-    for(i = 0; i < CHUNK_NX; i++) {
-        for(j = 0; j < CHUNK_NY; j++) {
-            if ((direct_buf[i][j]).a    != (read_chunk[i][j]).a    ||
-                (direct_buf[i][j]).b    != (read_chunk[i][j]).b    ||
-                (direct_buf[i][j]).c[0] != (read_chunk[i][j]).c[0] ||
-                (direct_buf[i][j]).c[1] != (read_chunk[i][j]).c[1] ||
-                (direct_buf[i][j]).c[2] != (read_chunk[i][j]).c[2] ||
-                (direct_buf[i][j]).c[3] != (read_chunk[i][j]).c[3] ||
-                (direct_buf[i][j]).d    != (read_chunk[i][j]).d    ||
-                (direct_buf[i][j]).e    != (read_chunk[i][j]).e) {
-                    HDprintf("    1. Read different values than written.");
-                    HDprintf("    At index %d,%d\n", i, j);
-                    HDprintf("    src={a=%d, b=%d, c=[%d,%d,%d,%d], d=%d, e=%d\n",
-                        (direct_buf[i][j]).a, (direct_buf[i][j]).b, (direct_buf[i][j]).c[0], (direct_buf[i][j]).c[1], 
-                        (direct_buf[i][j]).c[2], (direct_buf[i][j]).c[3], (direct_buf[i][j]).d, (direct_buf[i][j]).e);
-                    HDprintf("    dst={a=%d, b=%d, c=[%d,%d,%d,%d], d=%d, e=%d\n",
-                        (read_chunk[i][j]).a, (read_chunk[i][j]).b, (read_chunk[i][j]).c[0], (read_chunk[i][j]).c[1], 
-                        (read_chunk[i][j]).c[2], (read_chunk[i][j]).c[3], (read_chunk[i][j]).d, (read_chunk[i][j]).e);
-
-                    goto error;
-            }
-        }
-    }
-
-    /*
-     * Select hyperslab for the chunk just written in the file
-     */
-    start[0]  = CHUNK_NX; start[1]  = CHUNK_NY;
-    stride[0] = 1; stride[1] = 1;
-    count[0]  = 1; count[1]  = 1;
-    block[0]  = CHUNK_NX; block[1]  = CHUNK_NY;
-    if((status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, start, stride, count, block)) < 0)
-        goto error;
-
-    /* Read the chunk back. Data should be converted */
-    if((status = H5Dread(dataset, dt, mem_space, dataspace, H5P_DEFAULT, check_chunk)) < 0)
-        goto error;
-
-    /* Check that the values read are the same as the values written */
-    for(i = 0; i < CHUNK_NX; i++) {
-        for(j = 0; j < CHUNK_NY; j++) {
-            if ((direct_buf[i][j]).a    != (check_chunk[i][j]).a    ||
-                (direct_buf[i][j]).c[0] != (check_chunk[i][j]).c[0] ||
-                (direct_buf[i][j]).c[1] != (check_chunk[i][j]).c[1] ||
-                (direct_buf[i][j]).c[2] != (check_chunk[i][j]).c[2] ||
-                (direct_buf[i][j]).c[3] != (check_chunk[i][j]).c[3] ||
-                (direct_buf[i][j]).e    != (check_chunk[i][j]).e) {
-                    HDprintf("    1. Read different values than written.");
-                    HDprintf("    At index %d,%d\n", i, j);
-                    HDprintf("    src={a=%d, b=%d, c=[%d,%d,%d,%d], d=%d, e=%d\n",
-                        (direct_buf[i][j]).a, (direct_buf[i][j]).b, (direct_buf[i][j]).c[0], (direct_buf[i][j]).c[1], 
-                        (direct_buf[i][j]).c[2], (direct_buf[i][j]).c[3], (direct_buf[i][j]).d, (direct_buf[i][j]).e);
-                    HDprintf("    dst={a=%d, c=[%d,%d,%d,%d], e=%d\n",
-                        (check_chunk[i][j]).a, (check_chunk[i][j]).c[0], (check_chunk[i][j]).c[1], (check_chunk[i][j]).c[2], 
-                        (check_chunk[i][j]).c[3], (check_chunk[i][j]).e);
-
-                    goto error;
-            }
-        }
-    }
-
-    /*
-     * Close/release resources.
-     */
-    H5Dclose(dataset);
-    H5Sclose(mem_space);
-    H5Sclose(dataspace);
-    H5Pclose(cparms);
-    H5Pclose(dxpl);
-    H5Tclose(st);
-    H5Tclose(dt);
-
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(dataset);
-        H5Sclose(mem_space);
-        H5Sclose(dataspace);
-        H5Pclose(cparms);
-        H5Pclose(dxpl);
-        H5Tclose(st);
-        H5Tclose(dt);
-    } H5E_END_TRY;
-
-    H5_FAILED();
-    return 1;
-} /* test_data_conv() */
-
-/*-------------------------------------------------------------------------
- * Function:	test_invalid_parameters
- *
- * Purpose:     Test invalid parameters for H5DOwrite_chunk and H5DOread_chunk
- *
- * Return:      Success:	0
- *              Failure:	1
- *
- * Programmer:  Raymond Lu	
- *              30 November 2012
- *
- *-------------------------------------------------------------------------
- */
-static int
-test_invalid_parameters(hid_t file)
-{
-    hid_t       dataspace = -1, dataset = -1;
-    hid_t       mem_space = -1;
-    hid_t       cparms = -1, dxpl = -1;
-    hsize_t     dims[2]  = {NX, NY};        
-    hsize_t     chunk_dims[2] ={CHUNK_NX, CHUNK_NY};
-    herr_t      status;
-    int         i, j, n;
-
-    unsigned    filter_mask = 0;
-    int         direct_buf[CHUNK_NX][CHUNK_NY];
-    hsize_t     offset[2] = {0, 0};
-    size_t      buf_size = CHUNK_NX*CHUNK_NY*sizeof(int);
-    int         aggression = 9;     /* Compression aggression setting */
-
-    hsize_t     chunk_nbytes;       /* Chunk size */
-
-    TESTING("invalid parameters for H5DOwrite_chunk/H5DOread_chunk");
-
-    /*
-     * Create the data space with unlimited dimensions.
-     */
-    if((dataspace = H5Screate_simple(RANK, dims, NULL)) < 0)
-        goto error;
-
-    if((mem_space = H5Screate_simple(RANK, chunk_dims, NULL)) < 0)
-        goto error;
-
-    /*
-     * Modify dataset creation properties
-     */
-    if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0)
-        goto error;
-
-    /*
-     * Create a new contiguous dataset to verify H5DOwrite_chunk/H5DOread_chunk doesn't work
-     */
-    if((dataset = H5Dcreate2(file, DATASETNAME5, H5T_NATIVE_INT, dataspace, H5P_DEFAULT,
-			cparms, H5P_DEFAULT)) < 0)
-        goto error;
-
-    if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-        goto error;
-
-    /* Initialize data for one chunk */
-    for(i = n = 0; i < CHUNK_NX; i++)
-        for(j = 0; j < CHUNK_NY; j++) {
-            direct_buf[i][j] = n++;
-        }
-
-    /* Try to write the chunk data to contiguous dataset.  It should fail */
-    offset[0] = CHUNK_NX;
-    offset[1] = CHUNK_NY;
-
-    H5E_BEGIN_TRY {
-        if((status = H5DOwrite_chunk(dataset, dxpl, filter_mask, offset, buf_size, direct_buf)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    /* Try to get chunk size for a contiguous dataset.  It should fail */
-    H5E_BEGIN_TRY {
-        if((status = H5Dget_chunk_storage_size(dataset, offset, &chunk_nbytes)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    /* Try to H5DOread_chunk from the contiguous dataset.  It should fail */
-    H5E_BEGIN_TRY {
-        if((status = H5DOread_chunk(dataset, dxpl, offset, &filter_mask, direct_buf)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    if(H5Dclose(dataset) < 0)
-        goto error;
-
-
-    /* Create a chunked dataset with compression filter */
-    if((status = H5Pset_chunk( cparms, RANK, chunk_dims)) < 0)
-        goto error;
-
-    if((status = H5Pset_deflate( cparms, (unsigned ) aggression)) < 0)
-        goto error;
-
-    /*
-     * Create a new dataset within the file using cparms
-     * creation properties.
-     */
-    if((dataset = H5Dcreate2(file, DATASETNAME6, H5T_NATIVE_INT, dataspace, H5P_DEFAULT,
-			cparms, H5P_DEFAULT)) < 0)
-        goto error;
-
-    /* Check invalid dataset ID for H5DOwrite_chunk and H5DOread_chunk */ 
-    H5E_BEGIN_TRY {
-        if((status = H5DOwrite_chunk((hid_t)-1, dxpl, filter_mask, offset, buf_size, direct_buf)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    H5E_BEGIN_TRY {
-        if((status = H5DOread_chunk((hid_t)-1, dxpl, offset, &filter_mask, direct_buf)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    /* Check invalid DXPL ID for H5DOwrite_chunk and H5DOread_chunk */
-    H5E_BEGIN_TRY {
-        if((status = H5DOwrite_chunk(dataset, (hid_t)-1, filter_mask, offset, buf_size, direct_buf)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    H5E_BEGIN_TRY {
-        if((status = H5DOread_chunk(dataset, (hid_t)-1, offset, &filter_mask, direct_buf)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    /* Check invalid OFFSET for H5DOwrite_chunk and H5DOread_chunk */
-    H5E_BEGIN_TRY {
-        if((status = H5DOwrite_chunk(dataset, dxpl, filter_mask, NULL, buf_size, direct_buf)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    H5E_BEGIN_TRY {
-        if((status = H5DOread_chunk(dataset, dxpl, NULL, &filter_mask, direct_buf)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    /* Check when OFFSET is out of dataset range for H5DOwrite_chunk and H5DOread_chunk */
-    offset[0] = NX + 1;
-    offset[1] = NY;
-    H5E_BEGIN_TRY {
-        if((status = H5DOwrite_chunk(dataset, dxpl, filter_mask, offset, buf_size, direct_buf)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    H5E_BEGIN_TRY {
-        if((status = H5DOread_chunk(dataset, dxpl, offset, &filter_mask, direct_buf)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    /* Check when OFFSET is not on chunk boundary for H5DOwrite_chunk and H5DOread_chunk */
-    offset[0] = CHUNK_NX;
-    offset[1] = CHUNK_NY + 1;
-    H5E_BEGIN_TRY {
-        if((status = H5DOwrite_chunk(dataset, dxpl, filter_mask, offset, buf_size, direct_buf)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    H5E_BEGIN_TRY {
-        if((status = H5DOread_chunk(dataset, dxpl, offset, &filter_mask, direct_buf)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    /* Check invalid buffer size for H5DOwrite_chunk only */
-    offset[0] = CHUNK_NX;
-    offset[1] = CHUNK_NY;
-    buf_size = 0; 
-    H5E_BEGIN_TRY {
-        if((status = H5DOwrite_chunk(dataset, dxpl, filter_mask, offset, buf_size, direct_buf)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    /* Check invalid data buffer for H5DOwrite_chunk and H5DOread_chunk */
-    buf_size = CHUNK_NX*CHUNK_NY*sizeof(int);
-    H5E_BEGIN_TRY {
-        if((status = H5DOwrite_chunk(dataset, dxpl, filter_mask, offset, buf_size, NULL)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    H5E_BEGIN_TRY {
-        if((status = H5DOread_chunk(dataset, dxpl, offset, &filter_mask, NULL)) != FAIL)
-            goto error;
-    } H5E_END_TRY;
-
-    if(H5Dclose(dataset) < 0)
-        goto error;
-
-    /*
-     * Close/release resources.
-     */
-    H5Sclose(mem_space);
-    H5Sclose(dataspace);
-    H5Pclose(cparms);
-    H5Pclose(dxpl);
-    
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(dataset);
-        H5Sclose(mem_space);
-        H5Sclose(dataspace);
-        H5Pclose(cparms);
-        H5Pclose(dxpl);
-    } H5E_END_TRY;
-
-    H5_FAILED();
-    return 1;
-} /* test_invalid_parameters() */
-
-/*-------------------------------------------------------------------------
- * Function:    test_direct_chunk_read_no_cache
- *
- * Purpose:     Test the basic functionality of H5DOread_chunk with the
- *              chunk cache diabled.
- *
- * Return:      Success:        0
- *              Failure:        1
- *
- * Programmer:  Matthew Strong (GE Healthcare)
- *              14 February 2016
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_FILTER_DEFLATE
-static int
-test_direct_chunk_read_no_cache (hid_t file)
-{
-    hid_t       dataspace = -1, dataset = -1;
-    hid_t       mem_space = -1;
-    hid_t       cparms = -1, dxpl = -1, dapl = -1;
-    hsize_t     dims[2]  = {NX, NY};
-    hsize_t     maxdims[2] = {H5S_UNLIMITED, H5S_UNLIMITED};
-    hsize_t     chunk_dims[2] = {CHUNK_NX, CHUNK_NY};
-    herr_t      status;             /* status from H5 function calls */
-    int         ret;                /* deflate return status */
-    int         data[NX][NY];
-    int         i, j, k, l, n;      /* local index variables */
-
-    unsigned    filter_mask = 0;    /* filter mask returned from H5DOread_chunk */
-    int         direct_buf[CHUNK_NX][CHUNK_NY];  /* chunk read with H5DOread and manually decompressed */
-    int         check_chunk[CHUNK_NX][CHUNK_NY]; /* chunk read with H5Dread */
-    hsize_t     offset[2]; /* chunk offset used for H5DOread_chunk */
-    size_t      buf_size = CHUNK_NX*CHUNK_NY*sizeof(int);
-
-    Bytef       *z_src = NULL;      /* source buffer        */
-    uLongf       z_src_nbytes = (uLongf)DEFLATE_SIZE_ADJUST(buf_size);
-    Bytef       *z_dst = (Bytef*)(direct_buf);
-    uLong        z_dst_nbytes = (uLong)buf_size;
-    int          aggression = 9;     /* Compression aggression setting */
-    void        *outbuf = NULL;      /* Pointer to new buffer */
-
-    hsize_t start[2];  /* Start of hyperslab */
-    hsize_t stride[2]; /* Stride of hyperslab */
-    hsize_t count[2];  /* Block count */
-    hsize_t block[2];  /* Block sizes */
-
-    TESTING("basic functionality of H5DOread_chunk (chunk cache disabled)");
-
-    /* Create the data space with unlimited dimensions. */
-    if((dataspace = H5Screate_simple(RANK, dims, maxdims)) < 0)
-        goto error;
-    if((mem_space = H5Screate_simple(RANK, chunk_dims, NULL)) < 0)
-        goto error;
-
-    /* Modify dataset creation properties, i.e. enable chunking and compression */
-    if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0)
-        goto error;
-    if((status = H5Pset_chunk( cparms, RANK, chunk_dims)) < 0)
-        goto error;
-    if((status = H5Pset_deflate( cparms, (unsigned) aggression)) < 0)
-        goto error;
-    if((dapl = H5Pcreate(H5P_DATASET_ACCESS)) < 0)
-        goto error;
-
-    /* Disable chunk cache by setting number of slots to 0 */
-    if((status = H5Pset_chunk_cache(dapl, 0, H5D_CHUNK_CACHE_NBYTES_DEFAULT, H5D_CHUNK_CACHE_W0_DEFAULT)) < 0)
-        goto error;
-
-    /* Create a new dataset within the file using cparms creation properties. */
-    if((dataset = H5Dcreate2(file, DATASETNAME8, H5T_NATIVE_INT, dataspace, H5P_DEFAULT,
-            cparms, dapl)) < 0)
-        goto error;
-
-    /* Initialize the dataset */
-    for(i = n = 0; i < NX; i++)
-        for(j = 0; j < NY; j++)
-            data[i][j] = n++;
-
-    if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-        goto error;
-
-    /* Write the data for the dataset.
-     * Data will skip chunk cache and go directly to disk. */
-    if((status = H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
-              dxpl, data)) < 0)
-        goto error;
-
-    /* Allocate output (compressed) buffer */
-    outbuf = HDmalloc(z_src_nbytes);
-    z_src = (Bytef *)outbuf;
-
-    /* For each chunk in the dataset, compare the result of H5Dread and H5DOread_chunk. */
-    for(i=0; i<NX/CHUNK_NX; i++) {
-        for(j=0; j<NY/CHUNK_NY; j++) {
-            /* Select hyperslab for one chunk in the file */
-            start[0]  = (hsize_t)i * CHUNK_NX; start[1]  = (hsize_t)j * CHUNK_NY;
-            stride[0] = 1; stride[1] = 1;
-            count[0]  = 1; count[1]  = 1;
-            block[0]  = CHUNK_NX; block[1]  = CHUNK_NY;
-
-            /* Hyperslab selection equals single chunk */
-            if((status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, start, stride, count, block)) < 0)
-                goto error;
-
-            /* Read the chunk back */
-            if((status = H5Dread(dataset, H5T_NATIVE_INT, mem_space, dataspace, H5P_DEFAULT, check_chunk)) < 0)
-                goto error;
-
-            offset[0] = (hsize_t)i * CHUNK_NX; offset[1] = (hsize_t)j * CHUNK_NY;
-            /* Read the compressed chunk back using the direct read function. */
-            if((status = H5DOread_chunk(dataset, dxpl, offset, &filter_mask, outbuf)) < 0)
-                goto error;
-
-            /* Check filter mask return value */
-            if(filter_mask != 0)
-                goto error;
-
-            /* Perform decompression from the source to the destination buffer */
-            ret = uncompress(z_dst, &z_dst_nbytes, z_src, z_src_nbytes);
-
-            /* Check for various zlib errors */
-            if(Z_BUF_ERROR == ret) {
-                HDfprintf(stderr, "overflow\n");
-                goto error;
-            } else if(Z_MEM_ERROR == ret) {
-                HDfprintf(stderr, "deflate memory error\n");
-                goto error;
-            } else if(Z_DATA_ERROR == ret) {
-                HDfprintf(stderr, "corrupted data\n");
-                goto error;
-            } else if(Z_OK != ret) {
-                HDfprintf(stderr, "other deflate error\n");
-                goto error;
-            }
-
-            /* Check that the decompressed values match those read from H5Dread */
-            for(k = 0; k < CHUNK_NX; k++) {
-                for(l = 0; l < CHUNK_NY; l++) {
-                    if(direct_buf[k][l] != check_chunk[k][l]) {
-                        HDprintf("\n    1. Read different values than written.");
-                        HDprintf("    At index %d,%d\n", k, l);
-                        HDprintf("    direct_buf=%d, check_chunk=%d\n", direct_buf[k][l], check_chunk[k][l]);
-                        goto error;
-                    }
-                }
-            }
-        }
-    }
-
-    /* Close/release resources. */
-    H5Dclose(dataset);
-    H5Sclose(mem_space);
-    H5Sclose(dataspace);
-    H5Pclose(cparms);
-    H5Pclose(dxpl);
-    H5Pclose(dapl);
-
-    if(outbuf)
-        HDfree(outbuf);
-
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(dataset);
-        H5Sclose(mem_space);
-        H5Sclose(dataspace);
-        H5Pclose(cparms);
-        H5Pclose(dxpl);
-        H5Pclose(dapl);
-    } H5E_END_TRY;
-
-    if(outbuf)
-        HDfree(outbuf);
-
-    H5_FAILED();
-    return 1;
-} /* test_direct_chunk_read_no_cache() */
-#endif /* H5_HAVE_FILTER_DEFLATE */
-
-#ifdef H5_HAVE_FILTER_DEFLATE
-static int
-test_direct_chunk_read_cache (hid_t file, hbool_t flush)
-{
-    hid_t       dataspace = -1, dataset = -1;
-    hid_t       mem_space = -1;
-    hid_t       cparms = -1, dxpl = -1;
-    hsize_t     dims[2]  = {NX, NY};
-    hsize_t     maxdims[2] = {H5S_UNLIMITED, H5S_UNLIMITED};
-    hsize_t     chunk_dims[2] = {CHUNK_NX, CHUNK_NY};
-    herr_t      status;             /* status from H5 function calls */
-    int         ret;                /* deflate return status */
-    int         data[NX][NY];
-    int         i, j, k, l, n;      /* local index variables */
-
-    unsigned    filter_mask = 0;    /* filter mask returned from H5DOread_chunk */
-    int         direct_buf[CHUNK_NX][CHUNK_NY];  /* chunk read with H5DOread and manually decompressed */
-    int         check_chunk[CHUNK_NX][CHUNK_NY]; /* chunk read with H5Dread */
-    hsize_t     offset[2]; /* chunk offset used for H5DOread_chunk */
-    size_t      buf_size = CHUNK_NX*CHUNK_NY*sizeof(int);
-
-    Bytef       *z_src = NULL;      /* source buffer        */
-    uLongf       z_src_nbytes = (uLongf)DEFLATE_SIZE_ADJUST(buf_size);
-    Bytef       *z_dst = (Bytef*)(direct_buf);
-    uLong        z_dst_nbytes = (uLong)buf_size;
-    int          aggression = 9;     /* Compression aggression setting */
-    void        *outbuf = NULL;      /* Pointer to new buffer */
-    hsize_t     read_buf_size = 0;
-
-    hsize_t start[2];  /* Start of hyperslab */
-    hsize_t stride[2]; /* Stride of hyperslab */
-    hsize_t count[2];  /* Block count */
-    hsize_t block[2];  /* Block sizes */
-
-    if(flush) {
-        TESTING("basic functionality of H5DOread_chunk (flush chunk cache)");
-    } else {
-        TESTING("basic functionality of H5DOread_chunk (does not flush chunk cache)");
-    }
-
-    /* Create the data space with unlimited dimensions. */
-    if((dataspace = H5Screate_simple(RANK, dims, maxdims)) < 0)
-        goto error;
-    if((mem_space = H5Screate_simple(RANK, chunk_dims, NULL)) < 0)
-        goto error;
-
-    /* Modify dataset creation properties, i.e. enable chunking and compression */
-    if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0)
-        goto error;
-    if((status = H5Pset_chunk( cparms, RANK, chunk_dims)) < 0)
-        goto error;
-    if((status = H5Pset_deflate( cparms, (unsigned) aggression)) < 0)
-        goto error;
-
-    /* Create a new dataset within the file using cparms creation properties. */
-    if((dataset = H5Dcreate2(file, flush?DATASETNAME9:DATASETNAME10, H5T_NATIVE_INT, dataspace, H5P_DEFAULT,
-            cparms, H5P_DEFAULT)) < 0)
-        goto error;
-
-    /* Initialize the dataset */
-    for(i = n = 0; i < NX; i++)
-        for(j = 0; j < NY; j++)
-            data[i][j] = n++;
-
-    if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-        goto error;
-
-    /* Write the data for the dataset.
-     * It should stay in the chunk cache. */
-    if((status = H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
-              dxpl, data)) < 0)
-        goto error;
-
-    if(flush) {
-        /* Flush the chunk cache to disk. Cache entry is not evicted. */
-        if(H5Fflush(dataset, H5F_SCOPE_LOCAL) < 0)
-            goto error;
-    }
-
-    /* Allocate output (compressed) buffer */
-    outbuf = HDmalloc(z_src_nbytes);
-    z_src = (Bytef *)outbuf;
-
-    /* For each chunk in the dataset, compare the result of H5Dread and H5DOread_chunk. */
-    for(i=0; i<NX/CHUNK_NX; i++) {
-        for(j=0; j<NY/CHUNK_NY; j++) {
-            /* Select hyperslab for one chunk in the file */
-            start[0]  = (hsize_t)i * CHUNK_NX; start[1]  = (hsize_t)j * CHUNK_NY;
-            stride[0] = 1; stride[1] = 1;
-            count[0]  = 1; count[1]  = 1;
-            block[0]  = CHUNK_NX; block[1]  = CHUNK_NY;
-
-            /* Hyperslab selection equals single chunk */
-            if((status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, start, stride, count, block)) < 0)
-                goto error;
-
-            /* Read the chunk back */
-            if((status = H5Dread(dataset, H5T_NATIVE_INT, mem_space, dataspace, H5P_DEFAULT, check_chunk)) < 0)
-                goto error;
-
-            offset[0] = (hsize_t)i * CHUNK_NX; offset[1] = (hsize_t)j * CHUNK_NY;
-
-            /* Query chunk storage size */
-            if((status = H5Dget_chunk_storage_size(dataset, offset, &read_buf_size)) < 0)
-                goto error;
-            if(read_buf_size == 0)
-                goto error;
-        
-            /* Read the compressed chunk back using the direct read function. */
-            if((status = H5DOread_chunk(dataset, dxpl, offset, &filter_mask, outbuf)) < 0)
-                goto error;
-
-            /* Check filter mask return value */
-            if(filter_mask != 0)
-                goto error;
-
-            /* Perform decompression from the source to the destination buffer */
-            ret = uncompress(z_dst, &z_dst_nbytes, z_src, z_src_nbytes);
-
-            /* Check for various zlib errors */
-            if(Z_BUF_ERROR == ret) {
-                HDfprintf(stderr, "overflow\n");
-                goto error;
-            } else if(Z_MEM_ERROR == ret) {
-                HDfprintf(stderr, "deflate memory error\n");
-                goto error;
-            } else if(Z_DATA_ERROR == ret) {
-                HDfprintf(stderr, "corrupted data\n");
-                goto error;
-            } else if(Z_OK != ret) {
-                HDfprintf(stderr, "other deflate error\n");
-                goto error;
-            }
-
-            /* Check that the decompressed values match those read from H5Dread */
-            for(k = 0; k < CHUNK_NX; k++) {
-                for(l = 0; l < CHUNK_NY; l++) {
-                    if(direct_buf[k][l] != check_chunk[k][l]) {
-                        HDprintf("\n    1. Read different values than written.");
-                        HDprintf("    At index %d,%d\n", k, l);
-                        HDprintf("    direct_buf=%d, check_chunk=%d\n", direct_buf[k][l], check_chunk[k][l]);
-                        goto error;
-                    }
-                }
-            }
-        }
-    }
-
-    /* Close/release resources. */
-    H5Dclose(dataset);
-    H5Sclose(mem_space);
-    H5Sclose(dataspace);
-    H5Pclose(cparms);
-    H5Pclose(dxpl);
-
-    if(outbuf)
-        HDfree(outbuf);
-
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(dataset);
-        H5Sclose(mem_space);
-        H5Sclose(dataspace);
-        H5Pclose(cparms);
-        H5Pclose(dxpl);
-    } H5E_END_TRY;
-
-    if(outbuf)
-        HDfree(outbuf);
-
-    H5_FAILED();
-    return 1;
-} /* test_direct_chunk_read_cache() */
-#endif /* H5_HAVE_FILTER_DEFLATE */
-
-/*-------------------------------------------------------------------------
- * Function:    test_read_unfiltered_dset
- *
- * Purpose:     Test the basic functionality of H5DOread_chunk on a dataset
- *              without no filters applied.
- *
- * Return:      Success:        0
- *              Failure:        1
- *
- * Programmer:  Matthew Strong (GE Healthcare)
- *              30 November 2016
- *
- *-------------------------------------------------------------------------
- */
-static int
-test_read_unfiltered_dset(hid_t file)
-{
-    hid_t       dataspace = -1, dataset = -1;
-    hid_t       mem_space = -1;
-    hid_t       cparms = -1, dxpl = -1;
-    hsize_t     dims[2]  = {NX, NY};
-    hsize_t     maxdims[2] = {H5S_UNLIMITED, H5S_UNLIMITED};
-    hsize_t     chunk_dims[2] ={CHUNK_NX, CHUNK_NY};
-    herr_t      status;
-    int         data[NX][NY];
-    int         i, j, k, l, n;
-
-    unsigned    filter_mask = 0;
-    int         direct_buf[CHUNK_NX][CHUNK_NY];
-    int         check_chunk[CHUNK_NX][CHUNK_NY]; /* chunk read with H5Dread */
-    hsize_t     offset[2] = {0, 0};
-    size_t      buf_size = CHUNK_NX*CHUNK_NY*sizeof(int);
-    hsize_t     read_buf_size = 0;
-
-    hsize_t start[2];  /* Start of hyperslab */
-    hsize_t stride[2]; /* Stride of hyperslab */
-    hsize_t count[2];  /* Block count */
-    hsize_t block[2];  /* Block sizes */
-
-    TESTING("basic functionality of H5DOread_chunk on unfiltered datasets");
-
-    /* Create the data space with unlimited dimensions. */
-    if((dataspace = H5Screate_simple(RANK, dims, maxdims)) < 0)
-        goto error;
-    if((mem_space = H5Screate_simple(RANK, chunk_dims, NULL)) < 0)
-        goto error;
-
-    /* Modify dataset creation properties, i.e. enable chunking, no compression */
-    if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0)
-        goto error;
-    if((status = H5Pset_chunk( cparms, RANK, chunk_dims)) < 0)
-        goto error;
-
-    /* Create a new dataset within the file using cparms creation properties. */
-    if((dataset = H5Dcreate2(file, DATASETNAME12, H5T_NATIVE_INT, dataspace, H5P_DEFAULT,
-            cparms, H5P_DEFAULT)) < 0)
-        goto error;
-
-    /* Initialize the dataset */
-    for(i = n = 0; i < NX; i++)
-        for(j = 0; j < NY; j++)
-            data[i][j] = n++;
-
-    if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-        goto error;
-
-    /* Write the data for the dataset.
-     * It should stay in the chunk cache and will be evicted/flushed by
-     * the H5DOread_chunk function call. */
-    if((status = H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
-              dxpl, data)) < 0)
-        goto error;
-
-    if(H5Fflush(dataset, H5F_SCOPE_LOCAL) < 0)
-        goto error;
-
-    /* For each chunk in the dataset, compare the result of H5Dread and H5DOread_chunk. */
-    for(i=0; i<NX/CHUNK_NX; i++) {
-        for(j=0; j<NY/CHUNK_NY; j++) {
-            /* Select hyperslab for one chunk in the file */
-            start[0]  = (hsize_t)i * CHUNK_NX; start[1]  = (hsize_t)j * CHUNK_NY;
-            stride[0] = 1; stride[1] = 1;
-            count[0]  = 1; count[1]  = 1;
-            block[0]  = CHUNK_NX; block[1]  = CHUNK_NY;
-
-            /* Hyperslab selection equals single chunk */
-            if((status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, start, stride, count, block)) < 0)
-                goto error;
-
-            /* Read the chunk back */
-            if((status = H5Dread(dataset, H5T_NATIVE_INT, mem_space, dataspace, H5P_DEFAULT, check_chunk)) < 0)
-                goto error;
-
-            /* Query chunk storage size */
-            if((status = H5Dget_chunk_storage_size(dataset, offset, &read_buf_size)) < 0)
-                goto error;
-
-            if(read_buf_size != buf_size )
-                goto error;
-
-            offset[0] = (hsize_t)i * CHUNK_NX; offset[1] = (hsize_t)j * CHUNK_NY;
-            /* Read the raw chunk back */
-            HDmemset(&direct_buf, 0, sizeof(direct_buf));
-            filter_mask = UINT_MAX;
-            if((status = H5DOread_chunk(dataset, dxpl, offset, &filter_mask, direct_buf)) < 0)
-                goto error;
-
-            /* Check filter mask return value */
-            if(filter_mask != 0)
-                goto error;
-
-            /* Check that the decompressed values match those read from H5Dread */
-            for(k = 0; k < CHUNK_NX; k++) {
-                for(l = 0; l < CHUNK_NY; l++) {
-                    if(direct_buf[k][l] != check_chunk[k][l]) {
-                        HDprintf("\n    1. Read different values than written.");
-                        HDprintf("    At index %d,%d\n", k, l);
-                        HDprintf("    direct_buf=%d, check_chunk=%d\n", direct_buf[k][l], check_chunk[k][l]);
-                        goto error;
-                    }
-                }
-            }
-        }
-    }
-
-    /* Close/release resources. */
-    H5Dclose(dataset);
-    H5Sclose(mem_space);
-    H5Sclose(dataspace);
-    H5Pclose(cparms);
-    H5Pclose(dxpl);
-
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(dataset);
-        H5Sclose(mem_space);
-        H5Sclose(dataspace);
-        H5Pclose(cparms);
-        H5Pclose(dxpl);
-    } H5E_END_TRY;
-
-    H5_FAILED();
-    return 1;
-} /* test_read_unfiltered_dset() */
-
-/*-------------------------------------------------------------------------
- * Function:    test_read_unallocated_chunk
- *
- * Purpose:     Tests the H5DOread_chunk and H5Dget_chunk_storage_size with valid
- *              offets to chunks that have not been written to the dataset and are
- *              not allocated in the chunk storage on disk.
- *
- * Return:      Success:        0
- *              Failure:        1
- *
- * Programmer:  Matthew Strong (GE Healthcare)
- *              30 November 2016
- *
- *-------------------------------------------------------------------------
- */
-static int
-test_read_unallocated_chunk (hid_t file)
-{
-    hid_t       dataspace = -1, dataset = -1;
-    hid_t       mem_space = -1;
-    hid_t       cparms = -1, dxpl = -1;
-    hsize_t     dims[2]  = {NX, NY};
-    hsize_t     maxdims[2] = {H5S_UNLIMITED, H5S_UNLIMITED};
-    hsize_t     chunk_dims[2] = {CHUNK_NX, CHUNK_NY};
-    hsize_t     chunk_nbytes = CHUNK_NX*CHUNK_NY*sizeof(int);
-    hsize_t     direct_chunk_nbytes = 0;        /* size (bytes) of the on-disk chunk */
-    herr_t      status;     /* status from H5 function calls */
-    hsize_t     i, j;       /* local index variables */
-
-    unsigned    filter_mask = 0;    /* filter mask returned from H5DOread_chunk */
-    int         direct_buf[CHUNK_NX][CHUNK_NY]; /* chunk read with H5DOread and manually decompressed */
-    hsize_t     offset[2];  /* chunk offset used for H5DOread_chunk */
-
-    TESTING("H5DOread_chunk with unallocated chunks");
-
-    /* Create the data space with unlimited dimensions. */
-    if((dataspace = H5Screate_simple(RANK, dims, maxdims)) < 0)
-        goto error;
-    if((mem_space = H5Screate_simple(RANK, chunk_dims, NULL)) < 0)
-        goto error;
-
-    /* Modify dataset creation properties, i.e. enable chunking, no compression */
-    if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0)
-        goto error;
-    if((status = H5Pset_chunk( cparms, RANK, chunk_dims)) < 0)
-        goto error;
-
-    /* Create a new dataset within the file using cparms creation properties. */
-    if((dataset = H5Dcreate2(file, DATASETNAME11, H5T_NATIVE_INT, dataspace, H5P_DEFAULT,
-            cparms, H5P_DEFAULT)) < 0)
-        goto error;
-
-    if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-        goto error;
-
-    /* Write a single chunk to intialize the chunk storage */
-    HDmemset(&chunk_dims, 0, sizeof(chunk_dims));
-    offset[0] = 0; offset[1] = 0;
-
-    if(H5DOwrite_chunk(dataset, dxpl, filter_mask, offset, chunk_nbytes, &chunk_dims) < 0)
-        goto error;
-
-    /* Attempt to read each chunk in the dataset. Chunks are not allocated,
-     * therefore we expect the result of H5DOread_chunk to fail. Chunk idx starts
-     * at 1, since one chunk was written to init the chunk storage. */
-    for(i=1; i<NX/CHUNK_NX; i++) {
-        for(j=0; j<NY/CHUNK_NY; j++) {
-
-            offset[0] = i * CHUNK_NX;
-            offset[1] = j * CHUNK_NY;
-
-            /* Read a non-existant chunk using the direct read function. */
-            H5E_BEGIN_TRY {
-                status = H5DOread_chunk(dataset, dxpl, offset, &filter_mask, &direct_buf);
-            } H5E_END_TRY;
-
-            /* Check that the chunk read call does not succeed. */
-            if(status != -1)
-                goto error;
-
-            /* Query the size of the non-existant chunk */
-            direct_chunk_nbytes = ULONG_MAX;
-            H5E_BEGIN_TRY {
-                status = H5Dget_chunk_storage_size(dataset, offset, &direct_chunk_nbytes);
-            } H5E_END_TRY;
-
-            /* Check that the chunk storage size call does not succeed. */
-            if(status != -1 )
-                goto error;
-            if(direct_chunk_nbytes != 0 )
-                goto error;
-
-        }
-    }
-
-    /* Close/release resources. */
-    H5Dclose(dataset);
-    H5Sclose(mem_space);
-    H5Sclose(dataspace);
-    H5Pclose(cparms);
-    H5Pclose(dxpl);
-
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(dataset);
-        H5Sclose(mem_space);
-        H5Sclose(dataspace);
-        H5Pclose(cparms);
-        H5Pclose(dxpl);
-    } H5E_END_TRY;
-
-    H5_FAILED();
-    return 1;
-} /* test_read_unallocated_chunk() */
-
-/*-------------------------------------------------------------------------
- * Function:    test_single_chunk_latest
- *
- * Purpose:     This is to verify the fix for jira issue HDFFV-10425.
- *              The problem was due to a bug in the internal ilbrary routine
- *              H5D__chunk_direct_write() which passed a null dataset
- *              pointer to the insert callback for the chunk index type.
- *              Currently, the single chunk index is the only one that
- *              used the dataset pointer in the insert callback.
- *
- *              This routine is based on the test program attached to
- *              this jira issue:
- *                  Create a file with the latest format and a chunked dataset
- *                  with one single chunk.  The library will use single chunk
- *                  index for the dataset.  
- *                  Verify that the data read is the same as the written data.
- *
- * Return:      Success:        0
- *              Failure:        1
- *
- *-------------------------------------------------------------------------
- */
-static int
-test_single_chunk_latest(void)
-{
-    hid_t fid;              /* File ID */
-    hid_t fapl;             /* File access property list ID */
-    hid_t sid;              /* Dataspace ID */
-    hid_t did;              /* Dataset ID */
-    hid_t dcpl;             /* Dataset creation property list */
-    hsize_t dims[2] = {DIM0, DIM1};         /* Dimension sizes */
-    hsize_t chunk[2] = {CHUNK0, CHUNK1};    /* Chunk dimension sizes */
-    hsize_t offset[2] = {0,0};              /* Offset for writing */
-    int wdata[DIM0][DIM1];  /* Write buffer */
-    int rdata[DIM0][DIM1];  /* Read buffer */
-    int i, j;               /* Local index variable */
-
-    TESTING("H5DOwrite_chunk with single chunk and latest format");
-
-    /* Initialize data */
-    for (i=0; i<DIM0; i++) {
-      for (j=0; j< DIM1; j++)
-        wdata[i][j] = j/CHUNK0;
-    }
-
-    /* Create a new file with the latest format  */
-    if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0)
-        goto error;
-    if(H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0)
-        goto error;
-    if((fid = H5Fcreate(FILE, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0)
-        goto error;
-
-    /* Create dataspace */
-    if((sid = H5Screate_simple(2, dims, NULL)) < 0)
-        goto error;
-
-    /* Create the dataset creation property list and set the chunk size */
-    if((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
-        goto error;
-    if(H5Pset_chunk(dcpl, 2, chunk) < 0)
-        goto error;
-
-    /* Create the dataset */
-    if((did = H5Dcreate2(fid, DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
-        goto error;
-
-    /* Write the data directly to the dataset */
-    if(H5DOwrite_chunk(did, H5P_DEFAULT, 0, offset, CHUNK0*CHUNK1*4, (void *)wdata) < 0)
-        goto error;
-
-    /*
-     * Close and release resources.
-     */
-    if(H5Pclose(dcpl) < 0)
-        goto error;
-    if(H5Dclose(did) < 0)
-        goto error;
-    if(H5Sclose(sid) < 0)
-        goto error;
-    if(H5Pclose(fapl) < 0)
-        goto error;
-    if(H5Fclose(fid) < 0)
-        goto error;
-
-    /* Open the file and dataset with default properties  */
-    if((fid = H5Fopen(FILE, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0)
-        goto error;
-    if((did = H5Dopen2(fid, DATASET, H5P_DEFAULT)) < 0)
-        goto error;
-
-    /* Retrieve dataset creation property list */
-    if((dcpl = H5Dget_create_plist(did)) < 0)
-        goto error;
-
-    /* Read the data */
-    if(H5Dread(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, rdata) < 0)
-        goto error;
-
-    /* Verify that the data read was correct.  */
-    for (i = 0; i < DIM0; i++) {
-        for (j = 0; j < DIM1; j++) {
-            if(rdata[i][j] != wdata[i][j])
-                goto error;
-        }
-    }
-
-    /*
-     * Close and release resources
-     */
-    if(H5Pclose(dcpl) < 0)
-        goto error;
-    if(H5Dclose(did) < 0)
-        goto error;
-    if(H5Fclose(fid) < 0)
-        goto error;
-
-    PASSED();
-    return 0;
-
-error:
-    H5E_BEGIN_TRY {
-        H5Dclose(did);
-        H5Sclose(sid);
-        H5Pclose(dcpl);
-        H5Pclose(fapl);
-        H5Fclose(fid);
-    } H5E_END_TRY;
-
-    H5_FAILED();
-    return 1;
-} /* test_single_chunk_latest() */
-
-/*-------------------------------------------------------------------------
- * Function:	Main function
- *
- * Purpose:	    Test direct chunk write function H5DOwrite_chunk and
- *              chunk direct read function H5DOread_chunk
- *
- * Return:	    Success:	0
- *		        Failure:	1
- *
- * Programmer:  Raymond Lu	
- *              30 November 2012
- *
- *-------------------------------------------------------------------------
- */
-int main( void )
-{
-    hid_t file_id;
-    int   nerrors=0;
-
-    /*
-     * Create a new file. If file exists its contents will be overwritten.
-     */
-    if((file_id = H5Fcreate(FILE_NAME, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0)
-        goto error;
-
-    /* Test direct chunk write and direct chunk read */
-#ifdef H5_HAVE_FILTER_DEFLATE
-    nerrors += test_direct_chunk_write(file_id);
-#endif /* H5_HAVE_FILTER_DEFLATE */
-	nerrors += test_direct_chunk_overwrite_data(file_id);
-    nerrors += test_skip_compress_write1(file_id);
-    nerrors += test_skip_compress_write2(file_id);
-    nerrors += test_data_conv(file_id);
-    nerrors += test_invalid_parameters(file_id);
-
-    /* Test direct chunk read */
-#ifdef H5_HAVE_FILTER_DEFLATE
-    nerrors += test_direct_chunk_read_no_cache(file_id);
-    nerrors += test_direct_chunk_read_cache(file_id, TRUE);
-    nerrors += test_direct_chunk_read_cache(file_id, FALSE);
-#endif /* H5_HAVE_FILTER_DEFLATE */
-    nerrors += test_read_unfiltered_dset(file_id);
-    nerrors += test_read_unallocated_chunk(file_id);
-
-    nerrors += test_single_chunk_latest();
-
-    if(H5Fclose(file_id) < 0)
-        goto error;
-
-    /* check for errors */
-    if (nerrors)
-        goto error;
-
-    HDputs("All direct chunk read/write tests passed.");
-    return EXIT_SUCCESS;
-
-error:
-    HDputs("*** TESTS FAILED ***");
-    return EXIT_FAILURE;
-}