Fixed Spelling Errors (#1166)

* fixed missed closing of a dataset

* fixed missed closing of a dataset

* fixed typo in error return

* Committing clang-format changes

* minor edits

* code format

* Committing clang-format changes

* code format

* minor edit

* switched from using MPI_count, to actual bytes written for H5FD_mpio_debug rw debugging

* Committing clang-format changes

* changed size_i in printf to reflect the I/O.

* Committing clang-format changes

* Fixed seg fault with xlf on BE with -qintsize=8

* fixed error function string

* spelling corrections via codespell, added new spell check github actions

* Committing clang-format changes

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* Committing clang-format changes

* misc

* misc

* misc

* misc

* misc

* misc

* Committing clang-format changes

* misc

* work around for https://github.com/codespell-project/codespell/issues/2137

* misc

* added missing file

* misc

* misc.

* misc

* switch to using Codespell with GitHub Actions

* misc.

* misc.

* fixed more sp errors

* Fix new typos found by codespell.

* fixed proceed with precede

* fixed variable in fortran test

* fixed minnum

* updated spelling list

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>

7 files changed, 23 insertions, 23 deletions

diff --git a/hl/test/test_ds.c b/hl/test/test_ds.c
index c66ef49..12b6840 100644
--- a/hl/test/test_ds.c
+++ b/hl/test/test_ds.c
@@ -3021,7 +3021,7 @@ test_simple(void)
     }
 
     /*-------------------------------------------------------------------------
-     * dettach for DIM0
+     * detach for DIM0
      *-------------------------------------------------------------------------
      */
 
@@ -3319,11 +3319,11 @@ test_simple(void)
         goto out;
     dim = 0;
 
-    /* iterate trough the 1st dimension of "dset_a" and verify that its DS is valid  */
+    /* iterate through the 1st dimension of "dset_a" and verify that its DS is valid  */
     if (H5DSiterate_scales(did, dim, NULL, verify_scale, NULL) < 0)
         goto out;
 
-    /* iterate trough the 2nd dimension of "dset_a" and verify that its DS is valid
+    /* iterate through the 2nd dimension of "dset_a" and verify that its DS is valid
     start at DS index 2 */
     dim       = 1;
     scale_idx = 2;
@@ -3344,11 +3344,11 @@ test_simple(void)
         goto out;
     dim = 0;
 
-    /* iterate trough the 1st dimension of "dset_a" and read the DS  */
+    /* iterate through the 1st dimension of "dset_a" and read the DS  */
     if (H5DSiterate_scales(did, dim, NULL, read_scale, s1_wbuf) < 0)
         goto out;
 
-    /* iterate trough the 2nd dimension of "dset_a" and read the DS
+    /* iterate through the 2nd dimension of "dset_a" and read the DS
     start at DS index 2 */
     dim       = 1;
     scale_idx = 2;
@@ -3381,9 +3381,9 @@ test_simple(void)
         goto out;
     {
         int match_size; /* does this scale size matches the dataset DIM size */
-        int idx = 0;    /* scale index to start iterating, on return, index where iterator stoped */
+        int idx = 0;    /* scale index to start iterating, on return, index where iterator stopped */
 
-        /* iterate trough all the dimensions  */
+        /* iterate through all the dimensions  */
         for (dim = 0; dim < (unsigned)rank; dim++) {
             if ((match_size = H5DSiterate_scales(did, dim, &idx, match_dim_scale, NULL)) < 0)
                 goto out;
@@ -3475,9 +3475,9 @@ test_simple(void)
         goto out;
     {
         int match_size; /* does this scale size matches the dataset DIM size */
-        int idx;        /* scale index to start iterating, on return, index where iterator stoped */
+        int idx;        /* scale index to start iterating, on return, index where iterator stopped */
 
-        /* iterate trough all the dimensions  */
+        /* iterate through all the dimensions  */
         for (dim = 0; dim < (unsigned)rank; dim++) {
             /* always start at 1st scale */
             idx = 0;
@@ -4025,7 +4025,7 @@ test_errors(void)
     PASSED();
 
     /*-------------------------------------------------------------------------
-     * try to attach a scale to an image, pallete or table
+     * try to attach a scale to an image, palette or table
      *-------------------------------------------------------------------------
      */
 
@@ -4036,7 +4036,7 @@ test_errors(void)
         goto out;
 
     /* make a palette */
-    if (H5IMmake_palette(fid, "pallete", pal_dims, NULL) < 0)
+    if (H5IMmake_palette(fid, "palette", pal_dims, NULL) < 0)
         goto out;
 
     /* open the previous written "ds_b" */
@@ -4248,7 +4248,7 @@ test_iterators(void)
     if ((did = H5Dopen2(fid, "dset_a", H5P_DEFAULT)) < 0)
         goto out;
 
-    /* try to iterate trough the 1st dimension of "dset_a", return error */
+    /* try to iterate through the 1st dimension of "dset_a", return error */
     if (H5DSiterate_scales(did, 0, NULL, verify_scale, NULL) < 0)
         goto out;
 
@@ -4269,7 +4269,7 @@ test_iterators(void)
     if ((did = H5Dopen2(fid, "dset_a", H5P_DEFAULT)) < 0)
         goto out;
 
-    /* try to iterate trough the 3rd dimension of "dset_a", return error */
+    /* try to iterate through the 3rd dimension of "dset_a", return error */
     if (H5DSiterate_scales(did, 3, NULL, verify_scale, NULL) == SUCCEED)
         goto out;
 
@@ -4306,7 +4306,7 @@ test_iterators(void)
             goto out;
     }
 
-    /* iterate trough the 1st dimension of "dset_a" */
+    /* iterate through the 1st dimension of "dset_a" */
     if (H5DSiterate_scales(did, 0, NULL, op_continue, NULL) < 0)
         goto out;
 
diff --git a/hl/test/test_file_image.c b/hl/test/test_file_image.c
index bde8adc..6bb36e4 100644
--- a/hl/test/test_file_image.c
+++ b/hl/test/test_file_image.c
@@ -243,7 +243,7 @@ test_file_image(size_t open_images, size_t nflags, const unsigned *flags)
                  */
                 HDmemset((uint8_t *)tmp_ptr + SUPER_STATUS_FLAGS_OFF_V0_V1, (int)0,
                          (size_t)SUPER_STATUS_FLAGS_SIZE_V0_V1);
-                /* Does the comparision */
+                /* Does the comparison */
                 if (HDmemcmp(tmp_ptr, buf_ptr[i], (size_t)buf_size[i]) != 0)
                     FAIL_PUTS_ERROR("comparison of TMP vfd and user buffer failed");
                 /* Free the temporary buffer */
diff --git a/hl/test/test_h5do_compat.c b/hl/test/test_h5do_compat.c
index c554ae7..6f19d4b 100644
--- a/hl/test/test_h5do_compat.c
+++ b/hl/test/test_h5do_compat.c
@@ -31,7 +31,7 @@
  *
  * Purpose:        Test the basic functionality of H5DOwrite_chunk
  *
- * Return:        Success:    An identifer for the dataset used in the tests
+ * Return:        Success:    An identifier for the dataset used in the tests
  *                Failure:    H5I_INVALID_HID
  *
  *-------------------------------------------------------------------------
diff --git a/hl/test/test_image.c b/hl/test/test_image.c
index 81340c1..2251a04 100644
--- a/hl/test/test_image.c
+++ b/hl/test/test_image.c
@@ -219,7 +219,7 @@ test_simple(void)
      *-------------------------------------------------------------------------
      */
 
-    HL_TESTING2("pallete functions");
+    HL_TESTING2("palette functions");
 
     if (H5IMget_npalettes(fid, IMAGE1_NAME, &npals) < 0)
         goto out;
@@ -422,7 +422,7 @@ test_data(void)
 
     /*-------------------------------------------------------------------------
      * palette #4. blue-red
-     * make a palette whith blue to red colors
+     * make a palette with blue to red colors
      *-------------------------------------------------------------------------
      */
     for (i = 0, n = 0; i < 256 * 3; i += 3, n++) {
diff --git a/hl/test/test_ld.c b/hl/test/test_ld.c
index dc5755c..150d04c 100644
--- a/hl/test/test_ld.c
+++ b/hl/test/test_ld.c
@@ -189,7 +189,7 @@ typedef struct set_t {
  * This will fail on heiwa and amani when VALID_FIELDS1 is "field1,field3,field4"
  * because of alignment problems:
  *    amani and heiwa - 8 byte alignment
- *    jam - 4 byte alignemnt
+ *    jam - 4 byte alignment
  * This will need to be fixed in the library for H5Tget_native_type().
  */
 /* VALID_FIELDS1 "field1,field2.a,field3,field4" */
@@ -213,8 +213,8 @@ typedef struct test_valid_fields2 {
 #define TEST_BUF_SIZE 100
 int *               iibuf; /* buffer for storing retrieved elements */
 int *               ibuf;  /* buffer for storing retrieved elements (integer) */
-set_t *             cbuf;  /* buffer for storing retrieved elemnets (compound) */
-set_t *             ccbuf; /* buffer for storing retrieved elemnets (compound) */
+set_t *             cbuf;  /* buffer for storing retrieved elements (compound) */
+set_t *             ccbuf; /* buffer for storing retrieved elements (compound) */
 test_valid_fields1 *vbuf1; /* buffer for storing retrieved elements (FIELDS1) */
 test_valid_fields2 *vbuf2; /* buffer for storing retrieved elements (FIELDS2) */
 
diff --git a/hl/test/test_packet_vlen.c b/hl/test/test_packet_vlen.c
index 6d6bf34..e704944 100644
--- a/hl/test/test_packet_vlen.c
+++ b/hl/test/test_packet_vlen.c
@@ -677,7 +677,7 @@ error: /* An error has occurred.  Clean up and exit. */
  *
  * Description:
  *    - Added a fixed-length packet table to the file for variety
- *    - Use the helper funtion verify_ptlengthtype to test H5PTis_varlen
+ *    - Use the helper function verify_ptlengthtype to test H5PTis_varlen
  *      on each packet table.
  *
  * 2016/01/27 -BMR
diff --git a/hl/test/test_table.c b/hl/test/test_table.c
index 6199e27..90a930c 100644
--- a/hl/test/test_table.c
+++ b/hl/test/test_table.c
@@ -1464,7 +1464,7 @@ test_table(hid_t fid, int do_write)
 
     HL_TESTING2("getting field info");
 
-    /* alocate */
+    /* allocate */
     names_out = (char **)HDmalloc(sizeof(char *) * (size_t)NFIELDS);
     for (i = 0; i < NFIELDS; i++) {
         names_out[i] = (char *)HDmalloc(sizeof(char) * 255);