[svn-r14933] Purpose: Updating HDF5 to use automake 1.10.1 and libtool 2.2.2

Description: Applying update to autotools that was applied to 1.8 a couple
             of weeks ago to the trunk.

             Updated bin/reconfigure script to reflect the new versions of 
             libtool and automake in the /home1/packages/ directory.

             Rearranged configure.in script. When using libtool 2.2.2, the
             libtool script doesn't generate until later in the configuration
             process, so I had to move a test that parsed through the libtool
             script to a point after where it was actually being generated.

             Ran libtoolize on the project, and ran bin/reconfigure to
             regenerate configure and Makefile.in's throughout.

Tested:      kagiso, smirom, linew (h5committest)

2 files changed, 37 insertions, 29 deletions

diff --git a/hl/tools/Makefile.in b/hl/tools/Makefile.in
index 069c85c..a8654bb 100644
--- a/hl/tools/Makefile.in
+++ b/hl/tools/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.10 from Makefile.am.
+# Makefile.in generated by automake 1.10.1 from Makefile.am.
 # @configure_input@
 
 # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005, 2006  Free Software Foundation, Inc.
+# 2003, 2004, 2005, 2006, 2007, 2008  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -111,14 +111,14 @@ DEFAULT_API_VERSION = @DEFAULT_API_VERSION@
 DEFS = @DEFS@
 DEPDIR = @DEPDIR@
 DEPRECATED_SYMBOLS = @DEPRECATED_SYMBOLS@
+DSYMUTIL = @DSYMUTIL@
+DUMPBIN = @DUMPBIN@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
-ECHO = @ECHO@
 ECHO_C = @ECHO_C@
 ECHO_N = @ECHO_N@
 ECHO_T = @ECHO_T@
 EGREP = @EGREP@
 EXEEXT = @EXEEXT@
-F77 = @F77@
 
 # Make sure that these variables are exported to the Makefiles
 F9XMODEXT = @F9XMODEXT@
@@ -128,7 +128,7 @@ FC = @FC@
 FCFLAGS = @FCFLAGS@ @H5_FCFLAGS@
 FCFLAGS_f90 = @FCFLAGS_f90@
 FCLIBS = @FCLIBS@
-FFLAGS = @FFLAGS@
+FGREP = @FGREP@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
 GREP = @GREP@
@@ -152,6 +152,7 @@ INSTALL_PROGRAM = @INSTALL_PROGRAM@
 INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LD = @LD@
 LDFLAGS = @LDFLAGS@
 LIBOBJS = @LIBOBJS@
 LIBS = @LIBS@
@@ -164,6 +165,8 @@ MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
 MPI_GET_SIZE = @MPI_GET_SIZE@
+NM = @NM@
+NMEDIT = @NMEDIT@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
@@ -183,6 +186,7 @@ RUNSERIAL = @RUNSERIAL@
 R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
+SED = @SED@
 SETX = @SETX@
 SET_MAKE = @SET_MAKE@
 
@@ -213,7 +217,7 @@ abs_top_builddir = @abs_top_builddir@
 abs_top_srcdir = @abs_top_srcdir@
 ac_ct_CC = @ac_ct_CC@
 ac_ct_CXX = @ac_ct_CXX@
-ac_ct_F77 = @ac_ct_F77@
+ac_ct_DUMPBIN = @ac_ct_DUMPBIN@
 ac_ct_FC = @ac_ct_FC@
 am__include = @am__include@
 am__leading_dot = @am__leading_dot@
@@ -247,6 +251,7 @@ libdir = @libdir@
 libexecdir = @libexecdir@
 localedir = @localedir@
 localstatedir = @localstatedir@
+lt_ECHO = @lt_ECHO@
 mandir = @mandir@
 mkdir_p = @mkdir_p@
 oldincludedir = @oldincludedir@
@@ -436,8 +441,8 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonemtpy = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	mkid -fID $$unique
 tags: TAGS
 
@@ -462,8 +467,8 @@ TAGS: tags-recursive $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
 	  test -n "$$unique" || unique=$$empty_fix; \
 	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
@@ -473,13 +478,12 @@ ctags: CTAGS
 CTAGS: ctags-recursive $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
 	tags=; \
-	here=`pwd`; \
 	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	test -z "$(CTAGS_ARGS)$$tags$$unique" \
 	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique
diff --git a/hl/tools/gif2h5/Makefile.in b/hl/tools/gif2h5/Makefile.in
index ede1783..4441cfe 100644
--- a/hl/tools/gif2h5/Makefile.in
+++ b/hl/tools/gif2h5/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.10 from Makefile.am.
+# Makefile.in generated by automake 1.10.1 from Makefile.am.
 # @configure_input@
 
 # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005, 2006  Free Software Foundation, Inc.
+# 2003, 2004, 2005, 2006, 2007, 2008  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -78,7 +78,7 @@ am_h52gifgentst_OBJECTS = h52gifgentst.$(OBJEXT)
 h52gifgentst_OBJECTS = $(am_h52gifgentst_OBJECTS)
 h52gifgentst_LDADD = $(LDADD)
 h52gifgentst_DEPENDENCIES = $(LIBH5_HL) $(LIBH5TOOLS) $(LIBHDF5)
-DEFAULT_INCLUDES = -I. -I$(top_builddir)/src@am__isrc@
+DEFAULT_INCLUDES = -I.@am__isrc@ -I$(top_builddir)/src
 depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
 am__depfiles_maybe = depfiles
 COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
@@ -132,14 +132,14 @@ DEFAULT_API_VERSION = @DEFAULT_API_VERSION@
 DEFS = @DEFS@
 DEPDIR = @DEPDIR@
 DEPRECATED_SYMBOLS = @DEPRECATED_SYMBOLS@
+DSYMUTIL = @DSYMUTIL@
+DUMPBIN = @DUMPBIN@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
-ECHO = @ECHO@
 ECHO_C = @ECHO_C@
 ECHO_N = @ECHO_N@
 ECHO_T = @ECHO_T@
 EGREP = @EGREP@
 EXEEXT = @EXEEXT@
-F77 = @F77@
 
 # Make sure that these variables are exported to the Makefiles
 F9XMODEXT = @F9XMODEXT@
@@ -149,7 +149,7 @@ FC = @FC@
 FCFLAGS = @FCFLAGS@ @H5_FCFLAGS@
 FCFLAGS_f90 = @FCFLAGS_f90@
 FCLIBS = @FCLIBS@
-FFLAGS = @FFLAGS@
+FGREP = @FGREP@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
 GREP = @GREP@
@@ -173,6 +173,7 @@ INSTALL_PROGRAM = @INSTALL_PROGRAM@
 INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LD = @LD@
 LDFLAGS = @LDFLAGS@
 LIBOBJS = @LIBOBJS@
 LIBS = @LIBS@
@@ -185,6 +186,8 @@ MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
 MPI_GET_SIZE = @MPI_GET_SIZE@
+NM = @NM@
+NMEDIT = @NMEDIT@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
@@ -204,6 +207,7 @@ RUNSERIAL = @RUNSERIAL@
 R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
+SED = @SED@
 SETX = @SETX@
 SET_MAKE = @SET_MAKE@
 
@@ -234,7 +238,7 @@ abs_top_builddir = @abs_top_builddir@
 abs_top_srcdir = @abs_top_srcdir@
 ac_ct_CC = @ac_ct_CC@
 ac_ct_CXX = @ac_ct_CXX@
-ac_ct_F77 = @ac_ct_F77@
+ac_ct_DUMPBIN = @ac_ct_DUMPBIN@
 ac_ct_FC = @ac_ct_FC@
 am__include = @am__include@
 am__leading_dot = @am__leading_dot@
@@ -268,6 +272,7 @@ libdir = @libdir@
 libexecdir = @libexecdir@
 localedir = @localedir@
 localstatedir = @localstatedir@
+lt_ECHO = @lt_ECHO@
 mandir = @mandir@
 mkdir_p = @mkdir_p@
 oldincludedir = @oldincludedir@
@@ -396,8 +401,8 @@ install-binPROGRAMS: $(bin_PROGRAMS)
 	     || test -f $$p1 \
 	  ; then \
 	    f=`echo "$$p1" | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'`; \
-	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
-	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
+	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
+	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
 	  else :; fi; \
 	done
 
@@ -472,8 +477,8 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonemtpy = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	mkid -fID $$unique
 tags: TAGS
 
@@ -485,8 +490,8 @@ TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
 	  test -n "$$unique" || unique=$$empty_fix; \
 	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
@@ -496,13 +501,12 @@ ctags: CTAGS
 CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
 	tags=; \
-	here=`pwd`; \
 	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
 	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
 	  done | \
-	  $(AWK) '    { files[$$0] = 1; } \
-	       END { for (i in files) print i; }'`; \
+	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+	      END { if (nonempty) { for (i in files) print i; }; }'`; \
 	test -z "$(CTAGS_ARGS)$$tags$$unique" \
 	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique