Hdf5 1 10 sync (#1795)

* Branch sync updates and spelling

* Revert format of getenv

10 files changed, 38 insertions, 38 deletions

diff --git a/hl/c++/test/ptableTest.cpp b/hl/c++/test/ptableTest.cpp
index 2600367..bbc702e 100644
--- a/hl/c++/test/ptableTest.cpp
+++ b/hl/c++/test/ptableTest.cpp
@@ -223,7 +223,7 @@ TestGetNext()
     for (record = 1; record < 6; record++)
         wrapper.AppendPacket(&record);
 
-    /* Ensure that we can interate through the records and get the right ones */
+    /* Ensure that we can iterate through the records and get the right ones */
     for (i = 1; i < 6; i++) {
         wrapper.GetNextPacket(&record);
         if (record != i)
@@ -237,7 +237,7 @@ TestGetNext()
     if (error < 0)
         goto error;
 
-    /* Ensure that we can interate through the records and get the right ones */
+    /* Ensure that we can iterate through the records and get the right ones */
     for (i = 1; i < 6; i++) {
         error = wrapper.GetNextPacket(&record);
         if (record != i || error < 0)
@@ -605,8 +605,8 @@ const int     STRING_LENGTH = 19; // including terminating NULL
 int
 TestHDFFV_9758()
 {
-    hid_t  strtype;
-    hid_t  compound_type;
+    hid_t  strtype       = H5I_INVALID_HID;
+    hid_t  compound_type = H5I_INVALID_HID;
     herr_t err;
     struct s1_t {
         int    a;
diff --git a/hl/examples/ex_image1.c b/hl/examples/ex_image1.c
index ead1715..1294ab3 100644
--- a/hl/examples/ex_image1.c
+++ b/hl/examples/ex_image1.c
@@ -56,10 +56,10 @@ main(void)
     H5IMmake_image_8bit(file_id, "image1", (hsize_t)WIDTH, (hsize_t)HEIGHT, buf);
 
     /* make a palette */
-    H5IMmake_palette(file_id, "pallete", pal_dims, pal);
+    H5IMmake_palette(file_id, "palette", pal_dims, pal);
 
     /* attach the palette to the image */
-    H5IMlink_palette(file_id, "image1", "pallete");
+    H5IMlink_palette(file_id, "image1", "palette");
 
     /* close the file. */
     H5Fclose(file_id);
diff --git a/hl/src/H5DO.c b/hl/src/H5DO.c
index 3bdb4e2..1703669 100644
--- a/hl/src/H5DO.c
+++ b/hl/src/H5DO.c
@@ -182,7 +182,7 @@ H5DOappend(hid_t dset_id, hid_t dxpl_id, unsigned axis, size_t extension, hid_t
     if (FAIL == H5Sselect_hyperslab(new_space_id, H5S_SELECT_SET, start, stride, count, block))
         goto done;
 
-    /* The # of elemnts in the new extended dataspace */
+    /* The # of elements in the new extended dataspace */
     if ((snelmts = H5Sget_select_npoints(new_space_id)) < 0)
         goto done;
     nelmts = (hsize_t)snelmts;
diff --git a/hl/tools/gif2h5/decompress.c b/hl/tools/gif2h5/decompress.c
index 64d9643..ca33f86 100644
--- a/hl/tools/gif2h5/decompress.c
+++ b/hl/tools/gif2h5/decompress.c
@@ -178,7 +178,7 @@ Decompress(GIFIMAGEDESC *GifImageDesc, GIFHEAD *GifHead)
     DataMask = (1 << ((GifHead->PackedField & 0x07) + 1)) - 1;
     Raster   = GifImageDesc->GIFImage;
 
-    /* Check for image seperator */
+    /* Check for image separator */
 
     /* Now read in values from the image descriptor */
     IWidth    = GifImageDesc->ImageWidth;
@@ -193,7 +193,7 @@ Decompress(GIFIMAGEDESC *GifImageDesc, GIFHEAD *GifHead)
      */
 
     /*
-     * Start reading the raster data. First we get the intial code size and
+     * Start reading the raster data. First we get the initial code size and
      * compute decompressor constant values, based on this code size.
      */
 
diff --git a/hl/tools/gif2h5/gif.h b/hl/tools/gif2h5/gif.h
index 1a8cfe4..5ea8633 100644
--- a/hl/tools/gif2h5/gif.h
+++ b/hl/tools/gif2h5/gif.h
@@ -129,7 +129,7 @@ typedef struct _GifCommentExtension {
 **           in the HDF file.
 **           I have assumed that the ImageDescriptors and GraphicControls follow
 **           one another, ie. I have not associated them with each other. The driver
-**           must assume a 1-1 correspondance. The same discussion with plain text
+**           must assume a 1-1 correspondence. The same discussion with plain text
 **           extension.
 */
 typedef struct _GifToMem {
diff --git a/hl/tools/gif2h5/gif2mem.c b/hl/tools/gif2h5/gif2mem.c
index c66250b..2c2225e 100644
--- a/hl/tools/gif2h5/gif2mem.c
+++ b/hl/tools/gif2h5/gif2mem.c
@@ -40,7 +40,7 @@ Gif2Mem(GIFBYTE *MemGif, GIFTOMEM *GifMemoryStruct)
 {
     /*
      * The gif structure outline for passing data to memory is given in gif.h.
-     * These pointers are redunant, should take them out in ver. 2
+     * These pointers are redundant, should take them out in ver. 2
      */
     GIFHEAD *           gifHead;           /* GIF Header structure            */
     GIFIMAGEDESC **     gifImageDesc;      /* Logical Image Descriptor struct */
diff --git a/hl/tools/gif2h5/gifread.c b/hl/tools/gif2h5/gifread.c
index dd9e5be..3a6bcae 100644
--- a/hl/tools/gif2h5/gifread.c
+++ b/hl/tools/gif2h5/gifread.c
@@ -50,15 +50,15 @@ GetByte(const GIFBYTE *MemGif)
  *  Global Color Table (if any) from a GIF image file.  The information
  *  is stored in a GIFHEAD structure.
  *
- *  Returns: -1 if a FILE stream error occured during the read,
- *           otherwise 0 if no error occured.
+ *  Returns: -1 if a FILE stream error occurred during the read,
+ *           otherwise 0 if no error occurred.
  */
 int
 ReadGifHeader(GIFHEAD * GifHead, /* Pointer to GIF header structure  */
               GIFBYTE **MemGif2) /* GIF image file input FILE stream */
 {
     GIFWORD i;         /* Loop counter                                */
-    GIFWORD tableSize; /* Number of entires in the Global Color Table */
+    GIFWORD tableSize; /* Number of entries in the Global Color Table */
 
     GifHead->TableSize = 0;
     for (i = 0; i < 6; i++) {
@@ -103,7 +103,7 @@ ReadGifHeader(GIFHEAD * GifHead, /* Pointer to GIF header structure  */
         return -1;
 #endif /* 0 */
 
-    return 0; /* No FILE stream error occured */
+    return 0; /* No FILE stream error occurred */
 }
 
 /*
@@ -116,8 +116,8 @@ ReadGifHeader(GIFHEAD * GifHead, /* Pointer to GIF header structure  */
 **  Note that the ImageSeparator field value in the GIFIMAGEDESC
 **  structure is assigned by the function calling ReadGifImageDesc().
 **
-**  Returns: -1 if a FILE stream error occured during the read,
-**           otherwise 0 if no error occured.
+**  Returns: -1 if a FILE stream error occurred during the read,
+**           otherwise 0 if no error occurred.
 */
 int
 ReadGifImageDesc(GIFIMAGEDESC *GifImageDesc, /* Pointer to GIF image descriptor structure  */
@@ -196,7 +196,7 @@ ReadGifImageDesc(GIFIMAGEDESC *GifImageDesc, /* Pointer to GIF image descriptor
             *TempPtr++ = *(*MemGif2)++;
     } while (ch1);
 
-    return (0); /* No FILE stream error occured */
+    return (0); /* No FILE stream error occurred */
 }
 
 /*
@@ -205,8 +205,8 @@ ReadGifImageDesc(GIFIMAGEDESC *GifImageDesc, /* Pointer to GIF image descriptor
 **  Note that the Introducer and Label field values in the GIFGRAPHICCONTROL
 **  structure are assigned by the function calling ReadGifGraphicControl().
 **
-**  Returns: -1 if a FILE stream error occured during the read,
-**           otherwise 0 if no error occured.
+**  Returns: -1 if a FILE stream error occurred during the read,
+**           otherwise 0 if no error occurred.
 */
 int
 ReadGifGraphicControl(GIFGRAPHICCONTROL *GifGraphicControl, /* Pointer to GC Extension structure */
@@ -219,7 +219,7 @@ ReadGifGraphicControl(GIFGRAPHICCONTROL *GifGraphicControl, /* Pointer to GC Ext
         GifGraphicControl->GCEDump[i] = *(*MemGif2)++;
     }
 
-    return (0); /* No FILE stream error occured */
+    return (0); /* No FILE stream error occurred */
 }
 
 /*
@@ -228,8 +228,8 @@ ReadGifGraphicControl(GIFGRAPHICCONTROL *GifGraphicControl, /* Pointer to GC Ext
 **  Note that the Introducer and Label field values in the GIFLPLAINTEXT
 **  structure are assigned by the function calling ReadGifPlainText().
 **
-**  Returns: -1 if a FILE stream error occured during the read,
-**           otherwise 0 if no error occured.
+**  Returns: -1 if a FILE stream error occurred during the read,
+**           otherwise 0 if no error occurred.
 */
 int
 ReadGifPlainText(GIFPLAINTEXT *GifPlainText, /* Pointer to Plain Text Extension structure */
@@ -256,7 +256,7 @@ ReadGifPlainText(GIFPLAINTEXT *GifPlainText, /* Pointer to Plain Text Extension
            return(-1);
     */
 
-    return (0); /* No FILE stream error occured */
+    return (0); /* No FILE stream error occurred */
 }
 
 /*
@@ -265,8 +265,8 @@ ReadGifPlainText(GIFPLAINTEXT *GifPlainText, /* Pointer to Plain Text Extension
 **  Note that the Introducer and Label field values in the GIFAPPLICATION
 **  structure are assigned by the function calling ReadGifApplication().
 **
-**  Returns: -1 if a FILE stream error occured during the read,
-**           otherwise 0 if no error occured.
+**  Returns: -1 if a FILE stream error occurred during the read,
+**           otherwise 0 if no error occurred.
 */
 int
 ReadGifApplication(GIFAPPLICATION *GifApplication, /* Pointer to Application Extension structure */
@@ -292,7 +292,7 @@ ReadGifApplication(GIFAPPLICATION *GifApplication, /* Pointer to Application Ext
            return(-1);
     */
 
-    return (0); /* No FILE stream error occured */
+    return (0); /* No FILE stream error occurred */
 }
 
 /*
@@ -301,8 +301,8 @@ ReadGifApplication(GIFAPPLICATION *GifApplication, /* Pointer to Application Ext
 **  Note that the Introducer and Label field values in the GIFCOMMENT
 **  structure are assigned by the function calling ReadGifComment().
 **
-**  Returns: -1 if a FILE stream error occured during the read,
-**           otherwise 0 if no error occured.
+**  Returns: -1 if a FILE stream error occurred during the read,
+**           otherwise 0 if no error occurred.
 */
 int
 ReadGifComment(GIFCOMMENT *GifComment, /* Pointer to GIF Comment Extension structure */
@@ -316,7 +316,7 @@ ReadGifComment(GIFCOMMENT *GifComment, /* Pointer to GIF Comment Extension struc
 
     GifComment->Terminator = 0;
 
-    return (0); /* No FILE stream error occured */
+    return (0); /* No FILE stream error occurred */
 }
 
 /*
@@ -326,8 +326,8 @@ ReadGifComment(GIFCOMMENT *GifComment, /* Pointer to GIF Comment Extension struc
 **  A GIF "sub-block" is a single count byte followed by 1 to 255
 **  additional data bytes.
 **
-**  Returns: A NULL pointer if a memory allocation error occured,
-**           otherwise a valid pointer if no error occured.
+**  Returns: A NULL pointer if a memory allocation error occurred,
+**           otherwise a valid pointer if no error occurred.
 */
 static GIFBYTE *
 ReadDataSubBlocks(GIFBYTE **MemGif2, /* GIF image file input FILE stream              */
@@ -364,7 +364,7 @@ ReadDataSubBlocks(GIFBYTE **MemGif2, /* GIF image file input FILE stream
         if ((dataSize = *(*MemGif2)++) == 0)
             break; /* Block Terminator encountered */
 
-        /* Increase the buffer size to accomodate the next sub-block */
+        /* Increase the buffer size to accommodate the next sub-block */
         if (!(ptr1 = ptr2 = (GIFBYTE *)realloc(ptr2, bufSize + dataSize + 1)))
             return ((GIFBYTE *)NULL);
 
diff --git a/hl/tools/gif2h5/h52giftest.sh.in b/hl/tools/gif2h5/h52giftest.sh.in
index 2f84ef6..4f4057f 100644
--- a/hl/tools/gif2h5/h52giftest.sh.in
+++ b/hl/tools/gif2h5/h52giftest.sh.in
@@ -46,7 +46,7 @@ TOOLTEST()
 
 # Verify the test runs with failure (return code is not 0)
 # Use for testing if tool can handle error conditions like
-# illegal input, bad arguments, exeeding limits, ...
+# illegal input, bad arguments, exceeding limits, ...
 TOOLTESTFAIL()
 {
     # for now, discard any error messages generated.
diff --git a/hl/tools/gif2h5/writehdf.c b/hl/tools/gif2h5/writehdf.c
index 6ec6af4..c321519 100644
--- a/hl/tools/gif2h5/writehdf.c
+++ b/hl/tools/gif2h5/writehdf.c
@@ -27,7 +27,7 @@
  * Programmer: Unknown
  *
  * Modifications:  pvn
- *   Use the HDF5 IMAGE API to write the HDF5 image and pallete
+ *   Use the HDF5 IMAGE API to write the HDF5 image and palette
  *
  * Date: January, 31, 2006
  *
@@ -68,7 +68,7 @@ WriteHDF(GIFTOMEM GifMemoryStruct, char *HDFName)
 #endif /* UNUSED */
 
     if ((file_id = H5Fcreate(HDFName, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0) {
-        /* error occured opening the HDF File for write */
+        /* error occurred opening the HDF File for write */
         fprintf(stderr, "HDF file could not be opened for writing\n");
         fprintf(stderr,
                 "NOTE: GIF file must be present in the same directory as the binary on UNIX systems.\n");
diff --git a/hl/tools/h5watch/extend_dset.c b/hl/tools/h5watch/extend_dset.c
index 07a4053..7756506 100644
--- a/hl/tools/h5watch/extend_dset.c
+++ b/hl/tools/h5watch/extend_dset.c
@@ -83,7 +83,7 @@ extend_dset_two(const char *file, char *dname, int action1, int action2)
     size_t   dtype_size;  /* size of the dataset's datatype                   */
     unsigned num_elmts;   /* number of elements in the dataset                */
     int *    ibuf = NULL; /* buffer for storing retrieved elements (integer)  */
-    set_t *  cbuf = NULL; /* buffer for storing retrieved elemnets (compound) */
+    set_t *  cbuf = NULL; /* buffer for storing retrieved elements (compound) */
 
     /* Allocate memory */
     if (NULL == (ibuf = (int *)HDcalloc(TEST_BUF_SIZE, sizeof(int))))
@@ -237,7 +237,7 @@ extend_dset_one(const char *file, char *dname, int action)
     hsize_t count[1];    /* dimension sizes of appended data                 */
     size_t  dtype_size;  /* size of the dataset's datatype                   */
     int *   ibuf = NULL; /* buffer for storing retrieved elements (integer)  */
-    set_t * cbuf = NULL; /* buffer for storing retrieved elemnets (compound) */
+    set_t * cbuf = NULL; /* buffer for storing retrieved elements (compound) */
 
     /* Allocate memory */
     if (NULL == (ibuf = (int *)HDcalloc(TEST_BUF_SIZE, sizeof(int))))