[svn-r13829] Some systems (only SGI Altix ProPack 4 discovered so far) doesn't return correct

file size from MPI_File_get_size.  Bypass this problem by replacing it with
stat.  Add an option --disable-mpi-size in configure to indicate this function
doesn't work properly.  Add a test in testpar/t_mpi.c, too.  If it returns wrong
file size, print out a warning.

Tested on kagiso (parallel) because already tested the same change to v1.6 on 
several platforms (kagiso, cobalt, copper, and sol).

16 files changed, 17 insertions, 6 deletions

diff --git a/hl/Makefile.in b/hl/Makefile.in
index af961c1..32c02b3 100755
--- a/hl/Makefile.in
+++ b/hl/Makefile.in
@@ -164,6 +164,7 @@ MAINT = @MAINT@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
+MPI_GET_SIZE = @MPI_GET_SIZE@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
diff --git a/hl/c++/Makefile.in b/hl/c++/Makefile.in
index 4695fb8..81cb283 100644
--- a/hl/c++/Makefile.in
+++ b/hl/c++/Makefile.in
@@ -160,6 +160,7 @@ MAINT = @MAINT@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
+MPI_GET_SIZE = @MPI_GET_SIZE@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
diff --git a/hl/c++/examples/Makefile.in b/hl/c++/examples/Makefile.in
index 74a128f..fe344d9 100644
--- a/hl/c++/examples/Makefile.in
+++ b/hl/c++/examples/Makefile.in
@@ -154,6 +154,7 @@ MAINT = @MAINT@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
+MPI_GET_SIZE = @MPI_GET_SIZE@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
diff --git a/hl/c++/src/Makefile.in b/hl/c++/src/Makefile.in
index cf455de..35f1148 100644
--- a/hl/c++/src/Makefile.in
+++ b/hl/c++/src/Makefile.in
@@ -179,6 +179,7 @@ MAINT = @MAINT@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
+MPI_GET_SIZE = @MPI_GET_SIZE@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
diff --git a/hl/c++/test/Makefile.in b/hl/c++/test/Makefile.in
index 44cab07..d619d7b 100644
--- a/hl/c++/test/Makefile.in
+++ b/hl/c++/test/Makefile.in
@@ -170,6 +170,7 @@ MAINT = @MAINT@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
+MPI_GET_SIZE = @MPI_GET_SIZE@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
diff --git a/hl/examples/Makefile.in b/hl/examples/Makefile.in
index 0f191b3..64fda22 100644
--- a/hl/examples/Makefile.in
+++ b/hl/examples/Makefile.in
@@ -154,6 +154,7 @@ MAINT = @MAINT@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
+MPI_GET_SIZE = @MPI_GET_SIZE@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
diff --git a/hl/fortran/Makefile.in b/hl/fortran/Makefile.in
index 5b0bd72..db9c4c6 100644
--- a/hl/fortran/Makefile.in
+++ b/hl/fortran/Makefile.in
@@ -164,6 +164,7 @@ MAINT = @MAINT@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
+MPI_GET_SIZE = @MPI_GET_SIZE@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
diff --git a/hl/fortran/examples/Makefile.in b/hl/fortran/examples/Makefile.in
index 86cd941..693357f 100644
--- a/hl/fortran/examples/Makefile.in
+++ b/hl/fortran/examples/Makefile.in
@@ -154,6 +154,7 @@ MAINT = @MAINT@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
+MPI_GET_SIZE = @MPI_GET_SIZE@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
diff --git a/hl/fortran/src/Makefile.in b/hl/fortran/src/Makefile.in
index 8dbe8d4..bf9ac00 100644
--- a/hl/fortran/src/Makefile.in
+++ b/hl/fortran/src/Makefile.in
@@ -184,6 +184,7 @@ MAINT = @MAINT@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
+MPI_GET_SIZE = @MPI_GET_SIZE@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
diff --git a/hl/fortran/test/Makefile.in b/hl/fortran/test/Makefile.in
index 74d93fb..3233ade 100644
--- a/hl/fortran/test/Makefile.in
+++ b/hl/fortran/test/Makefile.in
@@ -174,6 +174,7 @@ MAINT = @MAINT@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
+MPI_GET_SIZE = @MPI_GET_SIZE@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
diff --git a/hl/src/H5TB.c b/hl/src/H5TB.c
index 7e1de59..666c6f4 100644
--- a/hl/src/H5TB.c
+++ b/hl/src/H5TB.c
@@ -113,7 +113,7 @@ herr_t H5TBmake_table( const char *table_title,
  }
 
  /* Create a simple data space with unlimited size */
- if ( (sid = H5Screate_simple( 1, dims, maxdims )) < 0 )
+ if ( (sid = H5Screate_simple( 1, dims, maxdims )) < 0 ) 
   return -1;
 
  /* Modify dataset creation properties, i.e. enable chunking  */
@@ -249,7 +249,6 @@ herr_t H5TBmake_table( const char *table_title,
  if ( H5Tclose( mem_type_id ) < 0 )
   return -1;
 
-
 return 0;
 
 /* error zone, gracefully close */
@@ -3281,7 +3280,8 @@ herr_t H5TBget_table_info ( hid_t loc_id,
    if ( H5LTget_attribute(loc_id,dset_name,"NROWS",H5T_NATIVE_LLONG,n)<0)
     return -1;
 
-   *nrecords = *n;
+   /**nrecords = *n;*/
+   *nrecords = n[0];
   }
   else
   {
diff --git a/hl/src/Makefile.in b/hl/src/Makefile.in
index 2c3e05e..670932f 100644
--- a/hl/src/Makefile.in
+++ b/hl/src/Makefile.in
@@ -180,6 +180,7 @@ MAINT = @MAINT@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
+MPI_GET_SIZE = @MPI_GET_SIZE@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
diff --git a/hl/test/Makefile.in b/hl/test/Makefile.in
index 1e580c6..08276d4 100644
--- a/hl/test/Makefile.in
+++ b/hl/test/Makefile.in
@@ -190,6 +190,7 @@ MAINT = @MAINT@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
+MPI_GET_SIZE = @MPI_GET_SIZE@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
diff --git a/hl/test/test_table.c b/hl/test/test_table.c
index f5b73f9..16172c4 100644
--- a/hl/test/test_table.c
+++ b/hl/test/test_table.c
@@ -354,7 +354,6 @@ int test_table(hid_t fid, int write)
  PASSED();
  }
 
-
  TESTING2("reading table");
 
 /*-------------------------------------------------------------------------
@@ -1355,7 +1354,6 @@ int test_table(hid_t fid, int write)
  PASSED();
  }
 
-
 /*-------------------------------------------------------------------------
  *
  * Functions tested:
@@ -1374,7 +1372,6 @@ int test_table(hid_t fid, int write)
                     chunk_size,fill,compress,wbuf)<0)
                     goto out;
 
-
  /* delete the field */
  if ( H5TBdelete_field(fid, "table14", "Pressure" ) < 0 )
   goto out;
diff --git a/hl/tools/Makefile.in b/hl/tools/Makefile.in
index 243f496..aa08313 100644
--- a/hl/tools/Makefile.in
+++ b/hl/tools/Makefile.in
@@ -161,6 +161,7 @@ MAINT = @MAINT@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
+MPI_GET_SIZE = @MPI_GET_SIZE@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
diff --git a/hl/tools/gif2h5/Makefile.in b/hl/tools/gif2h5/Makefile.in
index 46ccc98..f8befa4 100644
--- a/hl/tools/gif2h5/Makefile.in
+++ b/hl/tools/gif2h5/Makefile.in
@@ -182,6 +182,7 @@ MAINT = @MAINT@
 MAKEINFO = @MAKEINFO@
 MKDIR_P = @MKDIR_P@
 MPE = @MPE@
+MPI_GET_SIZE = @MPI_GET_SIZE@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@