[svn-r11179] Purpose:

Feature: check-clean target

Description:
'make check-clean' cleans up output files from tests.

Solution:
Tests create foo.chkexe and foo.log files.  Scripts create foo.chksh and
foo.logsh files.  'make check-clean' will clean these files up so that
the tests can be re-run.
Also suppressed some not-very-useful output of Makefiles when it would
echo commands.

Platforms tested:
mir, sleipnir, modi4

Misc. update:

11 files changed, 132 insertions, 65 deletions

diff --git a/hl/Makefile.in b/hl/Makefile.in
index 5e6b384..7ca0077 100755
--- a/hl/Makefile.in
+++ b/hl/Makefile.in
@@ -280,13 +280,16 @@ H5FC_PP = $(bindir)/h5pfc
 # Serial tests create .log and .logsh files.  It's important only to clean log
 # files generated by HDF5's tests, because the .log suffix is used for
 # other files (e.g., config.log)!
-MOSTLYCLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
+# On the other hand, it is very hard to specify the exact name of .chksh and
+# .logsh files because some scripts live in the source tree, not the build
+# tree.  Thus, we clean all .logsh and .chksh files.
+CHECK_CLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
         $(TEST_PROG_PARA_CHKEXE:.chkexe_=.chkexe)                        \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.chksh)                              \
-        $(TEST_SCRIPT_PARA_CHKSH:.chksh_=.chksh)                         \
         $(TEST_PROG_CHKEXE:.chkexe_=.log)                                \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.logsh)
+        $(TEST_PROG_PARA_CHKEXE:.chkexe_=.log)                           \
+        *.chksh *.logsh
 
+MOSTLYCLEANFILES = $(CHECK_CLEANFILES)
 @BUILD_FORTRAN_CONDITIONAL_TRUE@FORTRAN_DIR = fortran
 @BUILD_CXX_CONDITIONAL_TRUE@CXX_DIR = c++
 @BUILD_HDF5_HL_CONDITIONAL_TRUE@SUBDIRS = src test $(CXX_DIR) $(FORTRAN_DIR)
@@ -633,7 +636,7 @@ build-lib: $(BUILT_SOURCES) $(LIB)
 build-progs: $(BUILT_SOURCES) $(LIB) $(PROGS)
 build-tests: $(BUILT_SOURCES) $(LIB) $(PROGS) $(TESTS)
 
-lib progs tests check-s check-p ::
+lib progs tests check-s check-p check-clean ::
 	@$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
 	@for d in X $(SUBDIRS); do                                             \
 	    if test $$d != X && test $$d != .; then                           \
@@ -653,6 +656,10 @@ all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(TESTS)
 install-doc uninstall-doc:
 	@echo "Nothing to be done."
 
+# clean up files generated by tests so they can be re-run.
+build-check-clean:
+	$(RM) $(CHECK_CLEANFILES)
+
 # Run each test in order, passing $(TEST_FLAGS) to the program.
 # Since tests are done in a shell loop, "make -i" does apply inside it.
 # Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
diff --git a/hl/c++/Makefile.in b/hl/c++/Makefile.in
index b5fb124..7da55eb 100644
--- a/hl/c++/Makefile.in
+++ b/hl/c++/Makefile.in
@@ -285,13 +285,16 @@ H5FC_PP = $(bindir)/h5pfc
 # Serial tests create .log and .logsh files.  It's important only to clean log
 # files generated by HDF5's tests, because the .log suffix is used for
 # other files (e.g., config.log)!
-MOSTLYCLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
+# On the other hand, it is very hard to specify the exact name of .chksh and
+# .logsh files because some scripts live in the source tree, not the build
+# tree.  Thus, we clean all .logsh and .chksh files.
+CHECK_CLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
         $(TEST_PROG_PARA_CHKEXE:.chkexe_=.chkexe)                        \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.chksh)                              \
-        $(TEST_SCRIPT_PARA_CHKSH:.chksh_=.chksh)                         \
         $(TEST_PROG_CHKEXE:.chkexe_=.log)                                \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.logsh)
+        $(TEST_PROG_PARA_CHKEXE:.chkexe_=.log)                           \
+        *.chksh *.logsh
 
+MOSTLYCLEANFILES = $(CHECK_CLEANFILES)
 SUBDIRS = src test
 
 # Automake needs to be taught how to build lib, progs, and tests targets.
@@ -636,7 +639,7 @@ build-lib: $(BUILT_SOURCES) $(LIB)
 build-progs: $(BUILT_SOURCES) $(LIB) $(PROGS)
 build-tests: $(BUILT_SOURCES) $(LIB) $(PROGS) $(TESTS)
 
-lib progs tests check-s check-p ::
+lib progs tests check-s check-p check-clean ::
 	@$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
 	@for d in X $(SUBDIRS); do                                             \
 	    if test $$d != X && test $$d != .; then                           \
@@ -656,6 +659,10 @@ all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(TESTS)
 install-doc uninstall-doc:
 	@echo "Nothing to be done."
 
+# clean up files generated by tests so they can be re-run.
+build-check-clean:
+	$(RM) $(CHECK_CLEANFILES)
+
 # Run each test in order, passing $(TEST_FLAGS) to the program.
 # Since tests are done in a shell loop, "make -i" does apply inside it.
 # Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
diff --git a/hl/c++/src/Makefile.in b/hl/c++/src/Makefile.in
index e6b857f..2a20f72 100644
--- a/hl/c++/src/Makefile.in
+++ b/hl/c++/src/Makefile.in
@@ -307,13 +307,16 @@ H5FC_PP = $(bindir)/h5pfc
 # Serial tests create .log and .logsh files.  It's important only to clean log
 # files generated by HDF5's tests, because the .log suffix is used for
 # other files (e.g., config.log)!
-MOSTLYCLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
+# On the other hand, it is very hard to specify the exact name of .chksh and
+# .logsh files because some scripts live in the source tree, not the build
+# tree.  Thus, we clean all .logsh and .chksh files.
+CHECK_CLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
         $(TEST_PROG_PARA_CHKEXE:.chkexe_=.chkexe)                        \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.chksh)                              \
-        $(TEST_SCRIPT_PARA_CHKSH:.chksh_=.chksh)                         \
         $(TEST_PROG_CHKEXE:.chkexe_=.log)                                \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.logsh)
+        $(TEST_PROG_PARA_CHKEXE:.chkexe_=.log)                           \
+        *.chksh *.logsh
 
+MOSTLYCLEANFILES = $(CHECK_CLEANFILES)
 
 # Include src directory
 INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/hl/src
@@ -658,7 +661,7 @@ build-lib: $(BUILT_SOURCES) $(LIB)
 build-progs: $(BUILT_SOURCES) $(LIB) $(PROGS)
 build-tests: $(BUILT_SOURCES) $(LIB) $(PROGS) $(TESTS)
 
-lib progs tests check-s check-p ::
+lib progs tests check-s check-p check-clean ::
 	@$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
 	@for d in X $(SUBDIRS); do                                             \
 	    if test $$d != X && test $$d != .; then                           \
@@ -678,6 +681,10 @@ all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(TESTS)
 install-doc uninstall-doc:
 	@echo "Nothing to be done."
 
+# clean up files generated by tests so they can be re-run.
+build-check-clean:
+	$(RM) $(CHECK_CLEANFILES)
+
 # Run each test in order, passing $(TEST_FLAGS) to the program.
 # Since tests are done in a shell loop, "make -i" does apply inside it.
 # Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
diff --git a/hl/c++/test/Makefile.in b/hl/c++/test/Makefile.in
index efce9d9..53d499c 100644
--- a/hl/c++/test/Makefile.in
+++ b/hl/c++/test/Makefile.in
@@ -301,13 +301,16 @@ H5FC_PP = $(bindir)/h5pfc
 # Serial tests create .log and .logsh files.  It's important only to clean log
 # files generated by HDF5's tests, because the .log suffix is used for
 # other files (e.g., config.log)!
-MOSTLYCLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
+# On the other hand, it is very hard to specify the exact name of .chksh and
+# .logsh files because some scripts live in the source tree, not the build
+# tree.  Thus, we clean all .logsh and .chksh files.
+CHECK_CLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
         $(TEST_PROG_PARA_CHKEXE:.chkexe_=.chkexe)                        \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.chksh)                              \
-        $(TEST_SCRIPT_PARA_CHKSH:.chksh_=.chksh)                         \
         $(TEST_PROG_CHKEXE:.chkexe_=.log)                                \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.logsh)
+        $(TEST_PROG_PARA_CHKEXE:.chkexe_=.log)                           \
+        *.chksh *.logsh
 
+MOSTLYCLEANFILES = $(CHECK_CLEANFILES)
 
 # Include directories
 INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/hl/src -I$(top_srcdir)/hl/c++/src -I$(top_srcdir)/test
@@ -607,7 +610,7 @@ build-lib: $(BUILT_SOURCES) $(LIB)
 build-progs: $(BUILT_SOURCES) $(LIB) $(PROGS)
 build-tests: $(BUILT_SOURCES) $(LIB) $(PROGS) $(TESTS)
 
-lib progs tests check-s check-p ::
+lib progs tests check-s check-p check-clean ::
 	@$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
 	@for d in X $(SUBDIRS); do                                             \
 	    if test $$d != X && test $$d != .; then                           \
@@ -627,6 +630,10 @@ all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(TESTS)
 install-doc uninstall-doc:
 	@echo "Nothing to be done."
 
+# clean up files generated by tests so they can be re-run.
+build-check-clean:
+	$(RM) $(CHECK_CLEANFILES)
+
 # Run each test in order, passing $(TEST_FLAGS) to the program.
 # Since tests are done in a shell loop, "make -i" does apply inside it.
 # Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
diff --git a/hl/fortran/Makefile.in b/hl/fortran/Makefile.in
index f58bf2f..ba8c2ae 100644
--- a/hl/fortran/Makefile.in
+++ b/hl/fortran/Makefile.in
@@ -280,13 +280,16 @@ H5FC_PP = $(bindir)/h5pfc
 # Serial tests create .log and .logsh files.  It's important only to clean log
 # files generated by HDF5's tests, because the .log suffix is used for
 # other files (e.g., config.log)!
-MOSTLYCLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
+# On the other hand, it is very hard to specify the exact name of .chksh and
+# .logsh files because some scripts live in the source tree, not the build
+# tree.  Thus, we clean all .logsh and .chksh files.
+CHECK_CLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
         $(TEST_PROG_PARA_CHKEXE:.chkexe_=.chkexe)                        \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.chksh)                              \
-        $(TEST_SCRIPT_PARA_CHKSH:.chksh_=.chksh)                         \
         $(TEST_PROG_CHKEXE:.chkexe_=.log)                                \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.logsh)
+        $(TEST_PROG_PARA_CHKEXE:.chkexe_=.log)                           \
+        *.chksh *.logsh
 
+MOSTLYCLEANFILES = $(CHECK_CLEANFILES)
 SUBDIRS = src test
 
 # Automake needs to be taught how to build lib, progs, and tests targets.
@@ -631,7 +634,7 @@ build-lib: $(BUILT_SOURCES) $(LIB)
 build-progs: $(BUILT_SOURCES) $(LIB) $(PROGS)
 build-tests: $(BUILT_SOURCES) $(LIB) $(PROGS) $(TESTS)
 
-lib progs tests check-s check-p ::
+lib progs tests check-s check-p check-clean ::
 	@$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
 	@for d in X $(SUBDIRS); do                                             \
 	    if test $$d != X && test $$d != .; then                           \
@@ -651,6 +654,10 @@ all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(TESTS)
 install-doc uninstall-doc:
 	@echo "Nothing to be done."
 
+# clean up files generated by tests so they can be re-run.
+build-check-clean:
+	$(RM) $(CHECK_CLEANFILES)
+
 # Run each test in order, passing $(TEST_FLAGS) to the program.
 # Since tests are done in a shell loop, "make -i" does apply inside it.
 # Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
diff --git a/hl/fortran/src/Makefile.am b/hl/fortran/src/Makefile.am
index 1462fbb..14076e7 100644
--- a/hl/fortran/src/Makefile.am
+++ b/hl/fortran/src/Makefile.am
@@ -29,8 +29,6 @@ lib_LTLIBRARIES=libhdf5hl_fortran.la
 libhdf5hl_fortran_la_SOURCES=H5LTfc.c  H5IMfc.c H5IMcc.c H5TBfc.c H5LTff.f90  \
                 H5IMff.f90 H5TBff.f90 
 
-#libhdf5hl_fortran_la_LIBADD=$(LIBH5_HL)
-
 # Fortran module files can have different extensions and different names
 # (e.g., different capitalizations) on different platforms.  Write rules
 # for them explicitly rather than trying to teach automake about them.
@@ -38,17 +36,17 @@ libhdf5hl_fortran_la_SOURCES=H5LTfc.c  H5IMfc.c H5IMcc.c H5TBfc.c H5LTff.f90  \
 maintainer-clean-local: clean-local
 distclean-local: clean-local
 clean-local:
-	if test -n "$(F9XMODEXT)" && test "X$(F9XMODEXT)" != "Xo"; then \
+	@if test -n "$(F9XMODEXT)" && test "X$(F9XMODEXT)" != "Xo"; then \
 	  $(RM) *.$(F9XMODEXT);                                         \
 	fi
 
 install-data-local:
-	if test -n "$(F9XMODEXT)" && test "X$(F9XMODEXT)" != "Xo"; then \
+	@if test -n "$(F9XMODEXT)" && test "X$(F9XMODEXT)" != "Xo"; then \
 	  $(CP) $(top_builddir)/$(subdir)/*.$(F9XMODEXT) $(includedir)/. ; \
 	fi
 
 uninstall-local:
-	if test -n "$(F9XMODEXT)" -a "X$(F9XMODEXT)" != "Xo"; then      \
+	@if test -n "$(F9XMODEXT)" -a "X$(F9XMODEXT)" != "Xo"; then      \
 	  if test -f "$(includedir)/hdf5.$(F9XMODEXT)" -o -f "$(includedir)/HDF5.$(F9XMODEXT)"; then \
 	    set -x; $(RM) $(includedir)/*.$(F9XMODEXT);                 \
 	  fi;                                                           \
diff --git a/hl/fortran/src/Makefile.in b/hl/fortran/src/Makefile.in
index e945d4e..409bb03 100644
--- a/hl/fortran/src/Makefile.in
+++ b/hl/fortran/src/Makefile.in
@@ -301,13 +301,16 @@ H5FC_PP = $(bindir)/h5pfc
 # Serial tests create .log and .logsh files.  It's important only to clean log
 # files generated by HDF5's tests, because the .log suffix is used for
 # other files (e.g., config.log)!
-MOSTLYCLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
+# On the other hand, it is very hard to specify the exact name of .chksh and
+# .logsh files because some scripts live in the source tree, not the build
+# tree.  Thus, we clean all .logsh and .chksh files.
+CHECK_CLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
         $(TEST_PROG_PARA_CHKEXE:.chkexe_=.chkexe)                        \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.chksh)                              \
-        $(TEST_SCRIPT_PARA_CHKSH:.chksh_=.chksh)                         \
         $(TEST_PROG_CHKEXE:.chkexe_=.log)                                \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.logsh)
+        $(TEST_PROG_PARA_CHKEXE:.chkexe_=.log)                           \
+        *.chksh *.logsh
 
+MOSTLYCLEANFILES = $(CHECK_CLEANFILES)
 INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/hl/src -I$(top_builddir)/hl/src \
          -I$(top_srcdir)/fortran/src -I$(top_builddir)/fortran/src
 
@@ -641,8 +644,6 @@ uninstall-am: uninstall-info-am uninstall-libLTLIBRARIES \
 # as well.
 check-install: installcheck
 
-#libhdf5hl_fortran_la_LIBADD=$(LIBH5_HL)
-
 # Fortran module files can have different extensions and different names
 # (e.g., different capitalizations) on different platforms.  Write rules
 # for them explicitly rather than trying to teach automake about them.
@@ -650,17 +651,17 @@ check-install: installcheck
 maintainer-clean-local: clean-local
 distclean-local: clean-local
 clean-local:
-	if test -n "$(F9XMODEXT)" && test "X$(F9XMODEXT)" != "Xo"; then \
+	@if test -n "$(F9XMODEXT)" && test "X$(F9XMODEXT)" != "Xo"; then \
 	  $(RM) *.$(F9XMODEXT);                                         \
 	fi
 
 install-data-local:
-	if test -n "$(F9XMODEXT)" && test "X$(F9XMODEXT)" != "Xo"; then \
+	@if test -n "$(F9XMODEXT)" && test "X$(F9XMODEXT)" != "Xo"; then \
 	  $(CP) $(top_builddir)/$(subdir)/*.$(F9XMODEXT) $(includedir)/. ; \
 	fi
 
 uninstall-local:
-	if test -n "$(F9XMODEXT)" -a "X$(F9XMODEXT)" != "Xo"; then      \
+	@if test -n "$(F9XMODEXT)" -a "X$(F9XMODEXT)" != "Xo"; then      \
 	  if test -f "$(includedir)/hdf5.$(F9XMODEXT)" -o -f "$(includedir)/HDF5.$(F9XMODEXT)"; then \
 	    set -x; $(RM) $(includedir)/*.$(F9XMODEXT);                 \
 	  fi;                                                           \
@@ -682,7 +683,7 @@ build-lib: $(BUILT_SOURCES) $(LIB)
 build-progs: $(BUILT_SOURCES) $(LIB) $(PROGS)
 build-tests: $(BUILT_SOURCES) $(LIB) $(PROGS) $(TESTS)
 
-lib progs tests check-s check-p ::
+lib progs tests check-s check-p check-clean ::
 	@$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
 	@for d in X $(SUBDIRS); do                                             \
 	    if test $$d != X && test $$d != .; then                           \
@@ -702,6 +703,10 @@ all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(TESTS)
 install-doc uninstall-doc:
 	@echo "Nothing to be done."
 
+# clean up files generated by tests so they can be re-run.
+build-check-clean:
+	$(RM) $(CHECK_CLEANFILES)
+
 # Run each test in order, passing $(TEST_FLAGS) to the program.
 # Since tests are done in a shell loop, "make -i" does apply inside it.
 # Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
diff --git a/hl/fortran/test/Makefile.in b/hl/fortran/test/Makefile.in
index 594253a..891a304 100644
--- a/hl/fortran/test/Makefile.in
+++ b/hl/fortran/test/Makefile.in
@@ -300,15 +300,18 @@ H5FC_PP = $(bindir)/h5pfc
 # Serial tests create .log and .logsh files.  It's important only to clean log
 # files generated by HDF5's tests, because the .log suffix is used for
 # other files (e.g., config.log)!
+# On the other hand, it is very hard to specify the exact name of .chksh and
+# .logsh files because some scripts live in the source tree, not the build
+# tree.  Thus, we clean all .logsh and .chksh files.
+CHECK_CLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
+        $(TEST_PROG_PARA_CHKEXE:.chkexe_=.chkexe)                        \
+        $(TEST_PROG_CHKEXE:.chkexe_=.log)                                \
+        $(TEST_PROG_PARA_CHKEXE:.chkexe_=.log)                           \
+        *.chksh *.logsh
+
 
 # Temporary files.
-MOSTLYCLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe) \
-	$(TEST_PROG_PARA_CHKEXE:.chkexe_=.chkexe) \
-	$(TEST_SCRIPT_CHKSH:.chksh_=.chksh) \
-	$(TEST_SCRIPT_PARA_CHKSH:.chksh_=.chksh) \
-	$(TEST_PROG_CHKEXE:.chkexe_=.log) \
-	$(TEST_SCRIPT_CHKSH:.chksh_=.logsh) dsetf[1-4].h5 f1img.h5 \
-	f1tab.h5
+MOSTLYCLEANFILES = $(CHECK_CLEANFILES) dsetf[1-4].h5 f1img.h5 f1tab.h5
 AM_CPPFLAGS = -I$(top_srcdir)/src -I$(top_builddir)/src -I$(top_srcdir)/hl/src
 AM_FCFLAGS = -I$(top_builddir)/fortran/src -I$(top_builddir)/hl/fortran/src $(F9XMODFLAG)$(top_builddir)/fortran/src $(F9XMODFLAG)$(top_builddir)/hl/fortran/src
 
@@ -598,7 +601,7 @@ build-lib: $(BUILT_SOURCES) $(LIB)
 build-progs: $(BUILT_SOURCES) $(LIB) $(PROGS)
 build-tests: $(BUILT_SOURCES) $(LIB) $(PROGS) $(TESTS)
 
-lib progs tests check-s check-p ::
+lib progs tests check-s check-p check-clean ::
 	@$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
 	@for d in X $(SUBDIRS); do                                             \
 	    if test $$d != X && test $$d != .; then                           \
@@ -618,6 +621,10 @@ all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(TESTS)
 install-doc uninstall-doc:
 	@echo "Nothing to be done."
 
+# clean up files generated by tests so they can be re-run.
+build-check-clean:
+	$(RM) $(CHECK_CLEANFILES)
+
 # Run each test in order, passing $(TEST_FLAGS) to the program.
 # Since tests are done in a shell loop, "make -i" does apply inside it.
 # Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
diff --git a/hl/src/Makefile.in b/hl/src/Makefile.in
index 56a47b8..c4f5777 100644
--- a/hl/src/Makefile.in
+++ b/hl/src/Makefile.in
@@ -298,13 +298,16 @@ H5FC_PP = $(bindir)/h5pfc
 # Serial tests create .log and .logsh files.  It's important only to clean log
 # files generated by HDF5's tests, because the .log suffix is used for
 # other files (e.g., config.log)!
-MOSTLYCLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
+# On the other hand, it is very hard to specify the exact name of .chksh and
+# .logsh files because some scripts live in the source tree, not the build
+# tree.  Thus, we clean all .logsh and .chksh files.
+CHECK_CLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
         $(TEST_PROG_PARA_CHKEXE:.chkexe_=.chkexe)                        \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.chksh)                              \
-        $(TEST_SCRIPT_PARA_CHKSH:.chksh_=.chksh)                         \
         $(TEST_PROG_CHKEXE:.chkexe_=.log)                                \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.logsh)
+        $(TEST_PROG_PARA_CHKEXE:.chkexe_=.log)                           \
+        *.chksh *.logsh
 
+MOSTLYCLEANFILES = $(CHECK_CLEANFILES)
 
 # Add include directories to the C preprocessor flags
 AM_CPPFLAGS = -I$(top_srcdir)/src
@@ -646,7 +649,7 @@ build-lib: $(BUILT_SOURCES) $(LIB)
 build-progs: $(BUILT_SOURCES) $(LIB) $(PROGS)
 build-tests: $(BUILT_SOURCES) $(LIB) $(PROGS) $(TESTS)
 
-lib progs tests check-s check-p ::
+lib progs tests check-s check-p check-clean ::
 	@$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
 	@for d in X $(SUBDIRS); do                                             \
 	    if test $$d != X && test $$d != .; then                           \
@@ -666,6 +669,10 @@ all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(TESTS)
 install-doc uninstall-doc:
 	@echo "Nothing to be done."
 
+# clean up files generated by tests so they can be re-run.
+build-check-clean:
+	$(RM) $(CHECK_CLEANFILES)
+
 # Run each test in order, passing $(TEST_FLAGS) to the program.
 # Since tests are done in a shell loop, "make -i" does apply inside it.
 # Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
diff --git a/hl/test/Makefile.in b/hl/test/Makefile.in
index 0e9ee01..c648788 100644
--- a/hl/test/Makefile.in
+++ b/hl/test/Makefile.in
@@ -310,14 +310,18 @@ H5FC_PP = $(bindir)/h5pfc
 # Serial tests create .log and .logsh files.  It's important only to clean log
 # files generated by HDF5's tests, because the .log suffix is used for
 # other files (e.g., config.log)!
+# On the other hand, it is very hard to specify the exact name of .chksh and
+# .logsh files because some scripts live in the source tree, not the build
+# tree.  Thus, we clean all .logsh and .chksh files.
+CHECK_CLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
+        $(TEST_PROG_PARA_CHKEXE:.chkexe_=.chkexe)                        \
+        $(TEST_PROG_CHKEXE:.chkexe_=.log)                                \
+        $(TEST_PROG_PARA_CHKEXE:.chkexe_=.log)                           \
+        *.chksh *.logsh
+
 
 # Temporary files.  These files are the ones created by running `make test'.
-MOSTLYCLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe) \
-	$(TEST_PROG_PARA_CHKEXE:.chkexe_=.chkexe) \
-	$(TEST_SCRIPT_CHKSH:.chksh_=.chksh) \
-	$(TEST_SCRIPT_PARA_CHKSH:.chksh_=.chksh) \
-	$(TEST_PROG_CHKEXE:.chkexe_=.log) \
-	$(TEST_SCRIPT_CHKSH:.chksh_=.logsh) combine_tables[1-2].h5 \
+MOSTLYCLEANFILES = $(CHECK_CLEANFILES) combine_tables[1-2].h5 \
 	test_ds[1-6].h5 test_image[1-3].h5 test_lite[1-2].h5 \
 	test_table.h5 test_packet_table.h5
 
@@ -631,7 +635,7 @@ build-lib: $(BUILT_SOURCES) $(LIB)
 build-progs: $(BUILT_SOURCES) $(LIB) $(PROGS)
 build-tests: $(BUILT_SOURCES) $(LIB) $(PROGS) $(TESTS)
 
-lib progs tests check-s check-p ::
+lib progs tests check-s check-p check-clean ::
 	@$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
 	@for d in X $(SUBDIRS); do                                             \
 	    if test $$d != X && test $$d != .; then                           \
@@ -651,6 +655,10 @@ all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(TESTS)
 install-doc uninstall-doc:
 	@echo "Nothing to be done."
 
+# clean up files generated by tests so they can be re-run.
+build-check-clean:
+	$(RM) $(CHECK_CLEANFILES)
+
 # Run each test in order, passing $(TEST_FLAGS) to the program.
 # Since tests are done in a shell loop, "make -i" does apply inside it.
 # Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
diff --git a/hl/tools/gif2h5/Makefile.in b/hl/tools/gif2h5/Makefile.in
index b5b639d..b8c389a 100644
--- a/hl/tools/gif2h5/Makefile.in
+++ b/hl/tools/gif2h5/Makefile.in
@@ -308,13 +308,16 @@ H5FC_PP = $(bindir)/h5pfc
 # Serial tests create .log and .logsh files.  It's important only to clean log
 # files generated by HDF5's tests, because the .log suffix is used for
 # other files (e.g., config.log)!
-MOSTLYCLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
+# On the other hand, it is very hard to specify the exact name of .chksh and
+# .logsh files because some scripts live in the source tree, not the build
+# tree.  Thus, we clean all .logsh and .chksh files.
+CHECK_CLEANFILES = $(TEST_PROG_CHKEXE:.chkexe_=.chkexe)                    \
         $(TEST_PROG_PARA_CHKEXE:.chkexe_=.chkexe)                        \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.chksh)                              \
-        $(TEST_SCRIPT_PARA_CHKSH:.chksh_=.chksh)                         \
         $(TEST_PROG_CHKEXE:.chkexe_=.log)                                \
-        $(TEST_SCRIPT_CHKSH:.chksh_=.logsh)
+        $(TEST_PROG_PARA_CHKEXE:.chkexe_=.log)                           \
+        *.chksh *.logsh
 
+MOSTLYCLEANFILES = $(CHECK_CLEANFILES)
 
 # Include src and tools/lib directories
 INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/tools/lib
@@ -641,7 +644,7 @@ build-lib: $(BUILT_SOURCES) $(LIB)
 build-progs: $(BUILT_SOURCES) $(LIB) $(PROGS)
 build-tests: $(BUILT_SOURCES) $(LIB) $(PROGS) $(TESTS)
 
-lib progs tests check-s check-p ::
+lib progs tests check-s check-p check-clean ::
 	@$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
 	@for d in X $(SUBDIRS); do                                             \
 	    if test $$d != X && test $$d != .; then                           \
@@ -661,6 +664,10 @@ all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(TESTS)
 install-doc uninstall-doc:
 	@echo "Nothing to be done."
 
+# clean up files generated by tests so they can be re-run.
+build-check-clean:
+	$(RM) $(CHECK_CLEANFILES)
+
 # Run each test in order, passing $(TEST_FLAGS) to the program.
 # Since tests are done in a shell loop, "make -i" does apply inside it.
 # Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.