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author | Quincey Koziol <koziol@koziol.gov> | 2020-06-26 23:57:38 (GMT) |
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committer | Quincey Koziol <koziol@koziol.gov> | 2020-06-26 23:57:38 (GMT) |
commit | e767f44e953047297fece364218147c908e8b585 (patch) | |
tree | d4b6909f14b78bb732b6947adc46ac3cd3ca54f6 /java/examples | |
parent | 949649a2b6e00297cbdc49437e70a27e455e92d2 (diff) | |
parent | a08ab621febde7b09e4d86eab80cb029c123e9f6 (diff) | |
download | hdf5-e767f44e953047297fece364218147c908e8b585.zip hdf5-e767f44e953047297fece364218147c908e8b585.tar.gz hdf5-e767f44e953047297fece364218147c908e8b585.tar.bz2 |
Merge remote-tracking branch 'origin/develop' into monotonic_timer
Diffstat (limited to 'java/examples')
20 files changed, 515 insertions, 420 deletions
diff --git a/java/examples/CMakeLists.txt b/java/examples/CMakeLists.txt index a1a7483..3412c40 100644 --- a/java/examples/CMakeLists.txt +++ b/java/examples/CMakeLists.txt @@ -1,7 +1,7 @@ -cmake_minimum_required (VERSION 3.2.2) -PROJECT (HDFJAVA_EXAMPLES) +cmake_minimum_required (VERSION 3.12) +project (HDFJAVA_EXAMPLES Java) -add_subdirectory (${HDFJAVA_EXAMPLES_SOURCE_DIR}/datasets datasets) -add_subdirectory (${HDFJAVA_EXAMPLES_SOURCE_DIR}/datatypes datatypes) -add_subdirectory (${HDFJAVA_EXAMPLES_SOURCE_DIR}/groups groups) -add_subdirectory (${HDFJAVA_EXAMPLES_SOURCE_DIR}/intro intro) +add_subdirectory (datasets) +add_subdirectory (datatypes) +add_subdirectory (groups) +add_subdirectory (intro) diff --git a/java/examples/Makefile.am b/java/examples/Makefile.am index 8ca49f2..054407c 100644 --- a/java/examples/Makefile.am +++ b/java/examples/Makefile.am @@ -10,7 +10,7 @@ # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. # -# +# # This makefile mostly just reinvokes make in the various subdirectories # but does so in the correct order. You can alternatively invoke make from # each subdirectory manually. diff --git a/java/examples/datasets/CMakeLists.txt b/java/examples/datasets/CMakeLists.txt index d698cfd..fc4acc4 100644 --- a/java/examples/datasets/CMakeLists.txt +++ b/java/examples/datasets/CMakeLists.txt @@ -1,13 +1,8 @@ -cmake_minimum_required (VERSION 3.2.2) -PROJECT (HDFJAVA_EXAMPLES_DATASETS Java) +cmake_minimum_required (VERSION 3.12) +project (HDFJAVA_EXAMPLES_DATASETS Java) set (CMAKE_VERBOSE_MAKEFILE 1) -INCLUDE_DIRECTORIES ( - ${HDF5_JAVA_JNI_BINARY_DIR} - ${HDF5_JAVA_HDF5_LIB_DIR} -) - set (HDF_JAVA_EXAMPLES H5Ex_D_Alloc H5Ex_D_Checksum @@ -15,13 +10,9 @@ set (HDF_JAVA_EXAMPLES H5Ex_D_Compact H5Ex_D_External H5Ex_D_FillValue - H5Ex_D_Gzip H5Ex_D_Hyperslab H5Ex_D_ReadWrite - H5Ex_D_Shuffle - H5Ex_D_Szip H5Ex_D_UnlimitedAdd - H5Ex_D_UnlimitedGzip H5Ex_D_UnlimitedMod H5Ex_D_Nbit H5Ex_D_Transform @@ -29,7 +20,26 @@ set (HDF_JAVA_EXAMPLES H5Ex_D_Soint ) -if (WIN32) +set (HDF_JAVA_ZLIB_EXAMPLES + H5Ex_D_Gzip + H5Ex_D_Shuffle + H5Ex_D_UnlimitedGzip +) + +set (HDF_JAVA_SZIP_EXAMPLES + H5Ex_D_Szip +) + +# detect whether the encoder is present. + if (H5_HAVE_FILTER_DEFLATE) + set (${HDF_JAVA_EXAMPLES} ${HDF_JAVA_EXAMPLES} ${HDF_JAVA_ZLIB_EXAMPLES}) + endif () + + if (H5_HAVE_FILTER_SZIP) + set (${HDF_JAVA_EXAMPLES} ${HDF_JAVA_EXAMPLES} ${HDF_JAVA_SZIP_EXAMPLES}) + endif (H5_HAVE_FILTER_SZIP) + +if (WIN32 OR MINGW) set (CMAKE_JAVA_INCLUDE_FLAG_SEP ";") else () set (CMAKE_JAVA_INCLUDE_FLAG_SEP ":") @@ -61,81 +71,49 @@ foreach (HDFJAVA_JAR ${CMAKE_JAVA_INCLUDE_PATH}) set (CMAKE_JAVA_CLASSPATH "${CMAKE_JAVA_CLASSPATH}${CMAKE_JAVA_INCLUDE_FLAG_SEP}${HDFJAVA_JAR}") endforeach () -MACRO (ADD_H5_TEST resultfile resultcode) - if (CMAKE_BUILD_TYPE MATCHES Debug) - if (WIN32) - set (CMD_ARGS "-Dhdf.hdf5lib.H5.loadLibraryName=hdf5_java_D;") - else () - set (CMD_ARGS "-Dhdf.hdf5lib.H5.loadLibraryName=hdf5_java_debug;") - endif () - endif () - add_test ( - NAME JAVA_datasets-${resultfile} - COMMAND "${CMAKE_COMMAND}" - -D "TEST_TESTER=${CMAKE_Java_RUNTIME};${CMAKE_Java_RUNTIME_FLAGS}" - -D "TEST_CLASSPATH:STRING=${CMAKE_JAVA_CLASSPATH}${CMAKE_JAVA_INCLUDE_FLAG_SEP}${${resultfile}_JAR_FILE}" - -D "TEST_ARGS:STRING=${CMD_ARGS}${ARGN}" - -D "TEST_PROGRAM=examples.datasets.${resultfile}" - -D "TEST_LIBRARY_DIRECTORY=${CMAKE_TEST_OUTPUT_DIRECTORY}" - -D "TEST_FOLDER=${HDFJAVA_EXAMPLES_BINARY_DIR}" - -D "TEST_OUTPUT=datasets/${resultfile}.out" - -D "TEST_EXPECT=${resultcode}" - -D "TEST_REFERENCE=datasets/${resultfile}.txt" - -P "${HDF_RESOURCES_DIR}/jrunTest.cmake" - ) - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (JAVA_datasets-${resultfile} PROPERTIES DEPENDS ${last_test}) - endif () - set (last_test "JAVA_datasets-${resultfile}") -ENDMACRO () - -if (BUILD_TESTING) - -# detect whether the encoder is present. - if (H5_HAVE_FILTER_DEFLATE) - set (USE_FILTER_DEFLATE "true") - endif () - - if (H5_HAVE_FILTER_SZIP) - set (USE_FILTER_SZIP "true") - endif (H5_HAVE_FILTER_SZIP) +if (BUILD_TESTING AND HDF5_TEST_EXAMPLES AND HDF5_TEST_SERIAL) + get_property (target_name TARGET ${HDF5_JAVA_JNI_LIB_TARGET} PROPERTY OUTPUT_NAME) + set (CMD_ARGS "-Dhdf.hdf5lib.H5.loadLibraryName=${target_name}$<$<CONFIG:Debug>:${CMAKE_DEBUG_POSTFIX}>;") foreach (example ${HDF_JAVA_EXAMPLES}) - if (${example} STREQUAL "H5Ex_D_External") + if (example STREQUAL "H5Ex_D_External") add_test ( NAME JAVA_datasets-${example}-clear-objects - COMMAND ${CMAKE_COMMAND} - -E remove + COMMAND ${CMAKE_COMMAND} -E remove ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5 ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.data ) else () add_test ( NAME JAVA_datasets-${example}-clear-objects - COMMAND ${CMAKE_COMMAND} - -E remove - ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5 + COMMAND ${CMAKE_COMMAND} -E remove ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5 ) endif () - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (JAVA_datasets-${example}-clear-objects PROPERTIES DEPENDS ${last_test}) - endif () + add_test ( NAME JAVA_datasets-${example}-copy-objects - COMMAND ${CMAKE_COMMAND} - -E copy_if_different + COMMAND ${CMAKE_COMMAND} -E copy_if_different ${HDFJAVA_EXAMPLES_SOURCE_DIR}/testfiles/examples.datasets.${example}.txt ${HDFJAVA_EXAMPLES_DATASETS_BINARY_DIR}/${example}.txt ) set_tests_properties (JAVA_datasets-${example}-copy-objects PROPERTIES DEPENDS JAVA_datasets-${example}-clear-objects) - set (last_test "JAVA_datasets-${example}-copy-objects") - if (${example} STREQUAL "H5Ex_D_Szip") - if (USE_FILTER_SZIP) - ADD_H5_TEST (${example} 0) - endif () - else () - ADD_H5_TEST (${example} 0) - endif () + add_test ( + NAME JAVA_datasets-${example} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_TESTER=${CMAKE_Java_RUNTIME};${CMAKE_Java_RUNTIME_FLAGS}" + -D "TEST_CLASSPATH:STRING=${CMAKE_JAVA_CLASSPATH}${CMAKE_JAVA_INCLUDE_FLAG_SEP}${${example}_JAR_FILE}" + -D "TEST_ARGS:STRING=${CMD_ARGS}" + -D "TEST_PROGRAM=examples.datasets.${example}" + -D "TEST_LIBRARY_DIRECTORY=${CMAKE_TEST_OUTPUT_DIRECTORY}" + -D "TEST_FOLDER=${HDFJAVA_EXAMPLES_BINARY_DIR}" + -D "TEST_OUTPUT=datasets/${example}.out" + -D "TEST_EXPECT=0" + -D "TEST_REFERENCE=datasets/${example}.txt" + -P "${HDF_RESOURCES_DIR}/jrunTest.cmake" + ) + set_tests_properties (JAVA_datasets-${example} PROPERTIES + DEPENDS JAVA_datasets-${example}-copy-objects + ) endforeach () endif () diff --git a/java/examples/datasets/runExample.sh.in b/java/examples/datasets/JavaDatasetExample.sh.in index 21c3439..ae79416 100644 --- a/java/examples/datasets/runExample.sh.in +++ b/java/examples/datasets/JavaDatasetExample.sh.in @@ -52,12 +52,14 @@ test -d $BLDLIBDIR || mkdir -p $BLDLIBDIR # Comment '#' without space can be used. # -------------------------------------------------------------------- LIST_LIBRARY_FILES=" -$HDFLIB_HOME/slf4j-api-1.7.5.jar -$HDFLIB_HOME/ext/slf4j-simple-1.7.5.jar $top_builddir/src/.libs/libhdf5.* $top_builddir/java/src/jni/.libs/libhdf5_java.* $top_builddir/java/src/$JARFILE " +LIST_JAR_TESTFILES=" +$HDFLIB_HOME/slf4j-api-1.7.25.jar +$HDFLIB_HOME/ext/slf4j-simple-1.7.25.jar +" LIST_DATA_FILES=" $HDFTEST_HOME/../testfiles/examples.datasets.H5Ex_D_Alloc.txt $HDFTEST_HOME/../testfiles/examples.datasets.H5Ex_D_Checksum.txt @@ -83,6 +85,7 @@ $HDFTEST_HOME/../testfiles/examples.datasets.H5Ex_D_Soint.txt # copy files from source dirs to test dir # COPY_LIBFILES="$LIST_LIBRARY_FILES" +COPY_JARTESTFILES="$LIST_JAR_TESTFILES" COPY_LIBFILES_TO_BLDLIBDIR() { @@ -110,6 +113,30 @@ COPY_LIBFILES_TO_BLDLIBDIR() fi fi done + # copy jar files. Used -f to make sure get a new copy + for tstfile in $COPY_JARTESTFILES + do + # ignore '#' comment + echo $tstfile | tr -d ' ' | grep '^#' > /dev/null + RET=$? + if [ $RET -eq 1 ]; then + # skip cp if srcdir is same as destdir + # this occurs when build/test performed in source dir and + # make cp fail + SDIR=`$DIRNAME $tstfile` + INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` + INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` + if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then + $CP -f $tstfile $BLDLIBDIR + if [ $? -ne 0 ]; then + echo "Error: FAILED to copy $tstfile ." + + # Comment out this to CREATE expected file + exit $EXIT_FAILURE + fi + fi + fi + done } CLEAN_LIBFILES_AND_BLDLIBDIR() @@ -117,11 +144,14 @@ CLEAN_LIBFILES_AND_BLDLIBDIR() # skip rm if srcdir is same as destdir # this occurs when build/test performed in source dir and # make cp fail - SDIR=`$DIRNAME $HDFLIB_HOME/slf4j-api-1.7.5.jar` + SDIR=$HDFLIB_HOME INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $RM $BLDLIBDIR + for tstfile in $COPY_JARTESTFILES + do + $RM $BLDLIBDIR/tstfile + done fi } @@ -183,7 +213,7 @@ JAVAEXEFLAGS=@H5_JAVAFLAGS@ COPY_LIBFILES_TO_BLDLIBDIR COPY_DATAFILES_TO_BLDDIR -CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.5.jar:"$BLDLIBDIR"/slf4j-simple-1.7.5.jar:"$TESTJARFILE"" +CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.25.jar:"$BLDLIBDIR"/slf4j-simple-1.7.25.jar:"$TESTJARFILE"" TEST=/usr/bin/test if [ ! -x /usr/bin/test ] @@ -215,20 +245,18 @@ if $TEST -z "$LD_LIBRARY_PATH" ; then fi case $os_name in - Darwin) - DYLD_LIBRARY_PATH=$BLDLIBDIR:$DYLD_LIBRARY_PATH - export DYLD_LIBRARY_PATH - LD_LIBRARY_PATH=$DYLD_LIBRARY_PATH - ;; *) LD_LIBRARY_PATH=$BLDLIBDIR:$LD_LIBRARY_PATH - ;; + ;; esac export LD_LIBRARY_PATH echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Alloc" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Alloc > H5Ex_D_Alloc.out) +TESTING examples.datasets.H5Ex_D_Alloc +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Alloc > H5Ex_D_Alloc.out +) if diff H5Ex_D_Alloc.out examples.datasets.H5Ex_D_Alloc.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_Alloc" else @@ -237,7 +265,10 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Checksum" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Checksum > H5Ex_D_Checksum.out) +TESTING examples.datasets.H5Ex_D_Checksum +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Checksum > H5Ex_D_Checksum.out +) if diff H5Ex_D_Checksum.out examples.datasets.H5Ex_D_Checksum.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_Checksum" else @@ -246,7 +277,10 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Chunk" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Chunk > H5Ex_D_Chunk.out) +TESTING examples.datasets.H5Ex_D_Chunk +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Chunk > H5Ex_D_Chunk.out +) if diff H5Ex_D_Chunk.out examples.datasets.H5Ex_D_Chunk.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_Chunk" else @@ -255,7 +289,10 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Compact" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Compact > H5Ex_D_Compact.out) +TESTING examples.datasets.H5Ex_D_Compact +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Compact > H5Ex_D_Compact.out +) if diff H5Ex_D_Compact.out examples.datasets.H5Ex_D_Compact.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_Compact" else @@ -264,7 +301,10 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_External" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_External > H5Ex_D_External.out) +TESTING examples.datasets.H5Ex_D_External +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_External > H5Ex_D_External.out +) if diff H5Ex_D_External.out examples.datasets.H5Ex_D_External.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_External" else @@ -273,7 +313,10 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_FillValue" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_FillValue > H5Ex_D_FillValue.out) +TESTING examples.datasets.H5Ex_D_FillValue +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_FillValue > H5Ex_D_FillValue.out +) if diff H5Ex_D_FillValue.out examples.datasets.H5Ex_D_FillValue.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_FillValue" else @@ -281,17 +324,25 @@ else nerrors="`expr $nerrors + 1`" fi -echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Gzip" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Gzip > H5Ex_D_Gzip.out) -if diff H5Ex_D_Gzip.out examples.datasets.H5Ex_D_Gzip.txt > /dev/null; then - echo " PASSED datasets.H5Ex_D_Gzip" -else - echo "**FAILED** datasets.H5Ex_D_Gzip" - nerrors="`expr $nerrors + 1`" +if test $USE_FILTER_DEFLATE = "yes"; then + echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Gzip" + TESTING examples.datasets.H5Ex_D_Gzip + ( + $RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Gzip > H5Ex_D_Gzip.out + ) + if diff H5Ex_D_Gzip.out examples.datasets.H5Ex_D_Gzip.txt > /dev/null; then + echo " PASSED datasets.H5Ex_D_Gzip" + else + echo "**FAILED** datasets.H5Ex_D_Gzip" + nerrors="`expr $nerrors + 1`" + fi fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Hyperslab" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Hyperslab > H5Ex_D_Hyperslab.out) +TESTING examples.datasets.H5Ex_D_Hyperslab +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Hyperslab > H5Ex_D_Hyperslab.out +) if diff H5Ex_D_Hyperslab.out examples.datasets.H5Ex_D_Hyperslab.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_Hyperslab" else @@ -300,7 +351,10 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_ReadWrite" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_ReadWrite > H5Ex_D_ReadWrite.out) +TESTING examples.datasets.H5Ex_D_ReadWrite +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_ReadWrite > H5Ex_D_ReadWrite.out +) if diff H5Ex_D_ReadWrite.out examples.datasets.H5Ex_D_ReadWrite.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_ReadWrite" else @@ -308,18 +362,26 @@ else nerrors="`expr $nerrors + 1`" fi -echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Shuffle" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Shuffle > H5Ex_D_Shuffle.out) -if diff H5Ex_D_Shuffle.out examples.datasets.H5Ex_D_Shuffle.txt > /dev/null; then - echo " PASSED datasets.H5Ex_D_Shuffle" -else - echo "**FAILED** datasets.H5Ex_D_Shuffle" - nerrors="`expr $nerrors + 1`" +if test $USE_FILTER_DEFLATE = "yes"; then + echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Shuffle" + TESTING examples.datasets.H5Ex_D_Shuffle + ( + $RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Shuffle > H5Ex_D_Shuffle.out + ) + if diff H5Ex_D_Shuffle.out examples.datasets.H5Ex_D_Shuffle.txt > /dev/null; then + echo " PASSED datasets.H5Ex_D_Shuffle" + else + echo "**FAILED** datasets.H5Ex_D_Shuffle" + nerrors="`expr $nerrors + 1`" + fi fi if test $USE_FILTER_SZIP = "yes"; then echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Szip" - ($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Szip > H5Ex_D_Szip.out) + TESTING examples.datasets.H5Ex_D_Szip + ( + $RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Szip > H5Ex_D_Szip.out + ) if diff H5Ex_D_Szip.out examples.datasets.H5Ex_D_Szip.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_Szip" else @@ -329,7 +391,10 @@ if test $USE_FILTER_SZIP = "yes"; then fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_UnlimitedAdd" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_UnlimitedAdd > H5Ex_D_UnlimitedAdd.out) +TESTING examples.datasets.H5Ex_D_UnlimitedAdd +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_UnlimitedAdd > H5Ex_D_UnlimitedAdd.out +) if diff H5Ex_D_UnlimitedAdd.out examples.datasets.H5Ex_D_UnlimitedAdd.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_UnlimitedAdd" else @@ -338,7 +403,10 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_UnlimitedGzip" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_UnlimitedGzip > H5Ex_D_UnlimitedGzip.out) +TESTING examples.datasets.H5Ex_D_UnlimitedGzip +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_UnlimitedGzip > H5Ex_D_UnlimitedGzip.out +) if diff H5Ex_D_External.out examples.datasets.H5Ex_D_External.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_UnlimitedGzip" else @@ -347,7 +415,10 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_UnlimitedMod" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_UnlimitedMod > H5Ex_D_UnlimitedMod.out) +TESTING examples.datasets.H5Ex_D_UnlimitedMod +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_UnlimitedMod > H5Ex_D_UnlimitedMod.out +) if diff H5Ex_D_UnlimitedMod.out examples.datasets.H5Ex_D_UnlimitedMod.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_UnlimitedMod" else @@ -356,7 +427,10 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Nbit" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Nbit > H5Ex_D_Nbit.out) +TESTING examples.datasets.H5Ex_D_Nbit +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Nbit > H5Ex_D_Nbit.out +) if diff H5Ex_D_Nbit.out examples.datasets.H5Ex_D_Nbit.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_Nbit" else @@ -365,7 +439,10 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Transform" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Transform > H5Ex_D_Transform.out) +TESTING examples.datasets.H5Ex_D_Transform +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Transform > H5Ex_D_Transform.out +) if diff H5Ex_D_Transform.out examples.datasets.H5Ex_D_Transform.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_Transform" else @@ -374,7 +451,10 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Sofloat" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Sofloat > H5Ex_D_Sofloat.out) +TESTING examples.datasets.H5Ex_D_Sofloat +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Sofloat > H5Ex_D_Sofloat.out +) if diff H5Ex_D_Sofloat.out examples.datasets.H5Ex_D_Sofloat.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_Sofloat" else @@ -383,7 +463,10 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Soint" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Soint > H5Ex_D_Soint.out) +TESTING examples.datasets.H5Ex_D_Soint +( +$RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datasets.H5Ex_D_Soint > H5Ex_D_Soint.out +) if diff H5Ex_D_Soint.out examples.datasets.H5Ex_D_Soint.txt > /dev/null; then echo " PASSED datasets.H5Ex_D_Soint" else diff --git a/java/examples/datasets/Makefile.am b/java/examples/datasets/Makefile.am index 18100a6..c5b8a5d 100644 --- a/java/examples/datasets/Makefile.am +++ b/java/examples/datasets/Makefile.am @@ -28,13 +28,13 @@ classes: pkgpath = examples/datasets hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar -CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.5.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.5.jar:$$CLASSPATH +CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.25.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.25.jar:$$CLASSPATH jarfile = jar$(PACKAGE_TARNAME)datasets.jar AM_JAVACFLAGS = $(H5_JAVACFLAGS) -deprecation -TESTPACKAGE = +TESTPACKAGE = noinst_JAVA = \ H5Ex_D_Alloc.java \ @@ -63,10 +63,10 @@ noinst_DATA = $(jarfile) .PHONY: classes -check_SCRIPTS = runExample.sh +check_SCRIPTS = JavaDatasetExample.sh TEST_SCRIPT = $(check_SCRIPTS) -CLEANFILES = classnoinst.stamp $(jarfile) $(JAVAROOT)/$(pkgpath)/*.class runExample.sh +CLEANFILES = classnoinst.stamp $(jarfile) $(JAVAROOT)/$(pkgpath)/*.class JavaDatasetExample.sh clean: rm -rf $(JAVAROOT)/* diff --git a/java/examples/datatypes/CMakeLists.txt b/java/examples/datatypes/CMakeLists.txt index 8569b8b..bd4f483 100644 --- a/java/examples/datatypes/CMakeLists.txt +++ b/java/examples/datatypes/CMakeLists.txt @@ -1,13 +1,8 @@ -cmake_minimum_required (VERSION 3.2.2) -PROJECT (HDFJAVA_EXAMPLES_DATATYPES Java) +cmake_minimum_required (VERSION 3.12) +project (HDFJAVA_EXAMPLES_DATATYPES Java) set (CMAKE_VERBOSE_MAKEFILE 1) -INCLUDE_DIRECTORIES ( - ${HDF5_JAVA_JNI_BINARY_DIR} - ${HDF5_JAVA_HDF5_LIB_DIR} -) - set (HDF_JAVA_EXAMPLES H5Ex_T_Array H5Ex_T_ArrayAttribute @@ -29,7 +24,7 @@ set (HDF_JAVA_EXAMPLES H5Ex_T_VLString ) -if (WIN32) +if (WIN32 OR MINGW) set (CMAKE_JAVA_INCLUDE_FLAG_SEP ";") else () set (CMAKE_JAVA_INCLUDE_FLAG_SEP ":") @@ -61,54 +56,39 @@ foreach (HDFJAVA_JAR ${CMAKE_JAVA_INCLUDE_PATH}) set (CMAKE_JAVA_CLASSPATH "${CMAKE_JAVA_CLASSPATH}${CMAKE_JAVA_INCLUDE_FLAG_SEP}${HDFJAVA_JAR}") endforeach () -MACRO (ADD_H5_TEST resultfile resultcode) - if (CMAKE_BUILD_TYPE MATCHES Debug) - if (WIN32) - set (CMD_ARGS "-Dhdf.hdf5lib.H5.loadLibraryName=hdf5_java_D;") - else () - set (CMD_ARGS "-Dhdf.hdf5lib.H5.loadLibraryName=hdf5_java_debug;") - endif () - endif () - add_test ( - NAME JAVA_datatypes-${resultfile} - COMMAND "${CMAKE_COMMAND}" - -D "TEST_TESTER=${CMAKE_Java_RUNTIME};${CMAKE_Java_RUNTIME_FLAGS}" - -D "TEST_PROGRAM=examples.datatypes.${resultfile}" - -D "TEST_ARGS:STRING=${CMD_ARGS}${ARGN}" - -D "TEST_CLASSPATH:STRING=${CMAKE_JAVA_CLASSPATH}${CMAKE_JAVA_INCLUDE_FLAG_SEP}${${resultfile}_JAR_FILE}" - -D "TEST_LIBRARY_DIRECTORY=${CMAKE_TEST_OUTPUT_DIRECTORY}" - -D "TEST_FOLDER=${HDFJAVA_EXAMPLES_BINARY_DIR}" - -D "TEST_OUTPUT=datatypes/${resultfile}.out" - -D "TEST_EXPECT=${resultcode}" - -D "TEST_REFERENCE=datatypes/${resultfile}.txt" - -P "${HDF_RESOURCES_DIR}/jrunTest.cmake" - ) - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (JAVA_datatypes-${resultfile} PROPERTIES DEPENDS ${last_test}) - endif () - set (last_test "JAVA_datatypes-${resultfile}") -ENDMACRO () +if (BUILD_TESTING AND HDF5_TEST_EXAMPLES AND HDF5_TEST_SERIAL) + get_property (target_name TARGET ${HDF5_JAVA_JNI_LIB_TARGET} PROPERTY OUTPUT_NAME) + set (CMD_ARGS "-Dhdf.hdf5lib.H5.loadLibraryName=${target_name}$<$<CONFIG:Debug>:${CMAKE_DEBUG_POSTFIX}>;") -if (BUILD_TESTING) foreach (example ${HDF_JAVA_EXAMPLES}) add_test ( NAME JAVA_datatypes-${example}-clear-objects - COMMAND ${CMAKE_COMMAND} - -E remove - ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5 + COMMAND ${CMAKE_COMMAND} -E remove ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5 ) - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (JAVA_datatypes-${example}-clear-objects PROPERTIES DEPENDS ${last_test}) - endif () + add_test ( NAME JAVA_datatypes-${example}-copy-objects - COMMAND ${CMAKE_COMMAND} - -E copy_if_different + COMMAND ${CMAKE_COMMAND} -E copy_if_different ${HDFJAVA_EXAMPLES_SOURCE_DIR}/testfiles/examples.datatypes.${example}.txt ${HDFJAVA_EXAMPLES_DATATYPES_BINARY_DIR}/${example}.txt ) set_tests_properties (JAVA_datatypes-${example}-copy-objects PROPERTIES DEPENDS JAVA_datatypes-${example}-clear-objects) - set (last_test "JAVA_datatypes-${example}-copy-objects") - ADD_H5_TEST (${example} 0) + add_test ( + NAME JAVA_datatypes-${example} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_TESTER=${CMAKE_Java_RUNTIME};${CMAKE_Java_RUNTIME_FLAGS}" + -D "TEST_PROGRAM=examples.datatypes.${example}" + -D "TEST_ARGS:STRING=${CMD_ARGS}" + -D "TEST_CLASSPATH:STRING=${CMAKE_JAVA_CLASSPATH}${CMAKE_JAVA_INCLUDE_FLAG_SEP}${${example}_JAR_FILE}" + -D "TEST_LIBRARY_DIRECTORY=${CMAKE_TEST_OUTPUT_DIRECTORY}" + -D "TEST_FOLDER=${HDFJAVA_EXAMPLES_BINARY_DIR}" + -D "TEST_OUTPUT=datatypes/${example}.out" + -D "TEST_EXPECT=0" + -D "TEST_REFERENCE=datatypes/${example}.txt" + -P "${HDF_RESOURCES_DIR}/jrunTest.cmake" + ) + set_tests_properties (JAVA_datatypes-${example} PROPERTIES + DEPENDS JAVA_datatypes-${example}-copy-objects + ) endforeach () endif () diff --git a/java/examples/datatypes/H5Ex_T_Float.java b/java/examples/datatypes/H5Ex_T_Float.java index f677479..f15f774 100644 --- a/java/examples/datatypes/H5Ex_T_Float.java +++ b/java/examples/datatypes/H5Ex_T_Float.java @@ -22,6 +22,8 @@ package examples.datatypes; import java.text.DecimalFormat; +import java.text.DecimalFormatSymbols; +import java.util.Locale; import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; @@ -173,7 +175,7 @@ public class H5Ex_T_Float { } // Output the data to the screen. - DecimalFormat df = new DecimalFormat("#,##0.0000"); + DecimalFormat df = new DecimalFormat("#,##0.0000", new DecimalFormatSymbols(Locale.US)); System.out.println(DATASETNAME + ":"); for (int indx = 0; indx < dims[0]; indx++) { System.out.print(" ["); diff --git a/java/examples/datatypes/H5Ex_T_FloatAttribute.java b/java/examples/datatypes/H5Ex_T_FloatAttribute.java index 2e706d9..12831bc 100644 --- a/java/examples/datatypes/H5Ex_T_FloatAttribute.java +++ b/java/examples/datatypes/H5Ex_T_FloatAttribute.java @@ -22,6 +22,8 @@ package examples.datatypes; import java.text.DecimalFormat; +import java.text.DecimalFormatSymbols; +import java.util.Locale; import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; @@ -201,7 +203,7 @@ public class H5Ex_T_FloatAttribute { } // Output the data to the screen. - DecimalFormat df = new DecimalFormat("#,##0.0000"); + DecimalFormat df = new DecimalFormat("#,##0.0000", new DecimalFormatSymbols(Locale.US)); System.out.println(ATTRIBUTENAME + ":"); for (int indx = 0; indx < dims[0]; indx++) { System.out.print(" ["); diff --git a/java/examples/datatypes/runExample.sh.in b/java/examples/datatypes/JavaDatatypeExample.sh.in index 32e9ade..447512a 100644 --- a/java/examples/datatypes/runExample.sh.in +++ b/java/examples/datatypes/JavaDatatypeExample.sh.in @@ -49,12 +49,14 @@ test -d $BLDLIBDIR || mkdir -p $BLDLIBDIR # Comment '#' without space can be used. # -------------------------------------------------------------------- LIST_LIBRARY_FILES=" -$HDFLIB_HOME/slf4j-api-1.7.5.jar -$HDFLIB_HOME/ext/slf4j-simple-1.7.5.jar $top_builddir/src/.libs/libhdf5.* $top_builddir/java/src/jni/.libs/libhdf5_java.* $top_builddir/java/src/$JARFILE " +LIST_JAR_TESTFILES=" +$HDFLIB_HOME/slf4j-api-1.7.25.jar +$HDFLIB_HOME/ext/slf4j-simple-1.7.25.jar +" LIST_DATA_FILES=" $HDFTEST_HOME/../testfiles/examples.datatypes.H5Ex_T_Array.txt $HDFTEST_HOME/../testfiles/examples.datatypes.H5Ex_T_ArrayAttribute.txt @@ -80,6 +82,7 @@ $HDFTEST_HOME/../testfiles/examples.datatypes.H5Ex_T_VLString.txt # copy files from source dirs to test dir # COPY_LIBFILES="$LIST_LIBRARY_FILES" +COPY_JARTESTFILES="$LIST_JAR_TESTFILES" COPY_LIBFILES_TO_BLDLIBDIR() { @@ -107,6 +110,30 @@ COPY_LIBFILES_TO_BLDLIBDIR() fi fi done + # copy jar files. Used -f to make sure get a new copy + for tstfile in $COPY_JARTESTFILES + do + # ignore '#' comment + echo $tstfile | tr -d ' ' | grep '^#' > /dev/null + RET=$? + if [ $RET -eq 1 ]; then + # skip cp if srcdir is same as destdir + # this occurs when build/test performed in source dir and + # make cp fail + SDIR=`$DIRNAME $tstfile` + INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` + INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` + if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then + $CP -f $tstfile $BLDLIBDIR + if [ $? -ne 0 ]; then + echo "Error: FAILED to copy $tstfile ." + + # Comment out this to CREATE expected file + exit $EXIT_FAILURE + fi + fi + fi + done } CLEAN_LIBFILES_AND_BLDLIBDIR() @@ -114,11 +141,14 @@ CLEAN_LIBFILES_AND_BLDLIBDIR() # skip rm if srcdir is same as destdir # this occurs when build/test performed in source dir and # make cp fail - SDIR=`$DIRNAME $HDFLIB_HOME/slf4j-api-1.7.5.jar` + SDIR=$HDFLIB_HOME INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $RM $BLDLIBDIR + for tstfile in $COPY_JARTESTFILES + do + $RM $BLDLIBDIR/tstfile + done fi } @@ -179,7 +209,7 @@ JAVAEXEFLAGS=@H5_JAVAFLAGS@ COPY_LIBFILES_TO_BLDLIBDIR COPY_DATAFILES_TO_BLDDIR -CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.5.jar:"$BLDLIBDIR"/slf4j-simple-1.7.5.jar:"$TESTJARFILE"" +CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.25.jar:"$BLDLIBDIR"/slf4j-simple-1.7.25.jar:"$TESTJARFILE"" TEST=/usr/bin/test if [ ! -x /usr/bin/test ] @@ -211,11 +241,6 @@ if $TEST -z "$LD_LIBRARY_PATH" ; then fi case $os_name in - Darwin) - DYLD_LIBRARY_PATH=$BLDLIBDIR:$DYLD_LIBRARY_PATH - export DYLD_LIBRARY_PATH - LD_LIBRARY_PATH=$DYLD_LIBRARY_PATH - ;; *) LD_LIBRARY_PATH=$BLDLIBDIR:$LD_LIBRARY_PATH ;; @@ -224,7 +249,8 @@ esac export LD_LIBRARY_PATH echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Array" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Array > H5Ex_T_Array.out) +TESTING examples.datatypes.H5Ex_T_Array +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Array > H5Ex_T_Array.out) if diff H5Ex_T_Array.out examples.datatypes.H5Ex_T_Array.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_Array" else @@ -233,7 +259,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_ArrayAttribute" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_ArrayAttribute > H5Ex_T_ArrayAttribute.out) +TESTING examples.datatypes.H5Ex_T_ArrayAttribute +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_ArrayAttribute > H5Ex_T_ArrayAttribute.out) if diff H5Ex_T_ArrayAttribute.out examples.datatypes.H5Ex_T_ArrayAttribute.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_ArrayAttribute" else @@ -242,7 +269,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Bit" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Bit > H5Ex_T_Bit.out) +TESTING examples.datatypes.H5Ex_T_Bit +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Bit > H5Ex_T_Bit.out) if diff H5Ex_T_Bit.out examples.datatypes.H5Ex_T_Bit.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_Bit" else @@ -251,7 +279,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_BitAttribute" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_BitAttribute > H5Ex_T_BitAttribute.out) +TESTING examples.datatypes.H5Ex_T_BitAttribute +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_BitAttribute > H5Ex_T_BitAttribute.out) if diff H5Ex_T_BitAttribute.out examples.datatypes.H5Ex_T_BitAttribute.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_BitAttribute" else @@ -260,7 +289,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Commit" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Commit > H5Ex_T_Commit.out) +TESTING examples.datasets.H5Ex_T_Commit +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Commit > H5Ex_T_Commit.out) if diff H5Ex_T_Commit.out examples.datatypes.H5Ex_T_Commit.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_Commit" else @@ -269,7 +299,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Compound" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Compound > H5Ex_T_Compound.out) +TESTING examples.datatypes.H5Ex_T_Compound +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Compound > H5Ex_T_Compound.out) if diff H5Ex_T_Compound.out examples.datatypes.H5Ex_T_Compound.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_Compound" else @@ -278,7 +309,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_CompoundAttribute" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_CompoundAttribute > H5Ex_T_CompoundAttribute.out) +TESTING examples.datatypes.H5Ex_T_CompoundAttribute +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_CompoundAttribute > H5Ex_T_CompoundAttribute.out) if diff H5Ex_T_CompoundAttribute.out examples.datatypes.H5Ex_T_CompoundAttribute.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_CompoundAttribute" else @@ -287,7 +319,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Float" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Float > H5Ex_T_Float.out) +TESTING examples.datatypes.H5Ex_T_Float +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Float > H5Ex_T_Float.out) if diff H5Ex_T_Float.out examples.datatypes.H5Ex_T_Float.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_Float" else @@ -296,7 +329,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_FloatAttribute" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_FloatAttribute > H5Ex_T_FloatAttribute.out) +TESTING examples.datatypes.H5Ex_T_FloatAttribute +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_FloatAttribute > H5Ex_T_FloatAttribute.out) if diff H5Ex_T_FloatAttribute.out examples.datatypes.H5Ex_T_FloatAttribute.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_FloatAttribute" else @@ -305,7 +339,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Integer" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Integer > H5Ex_T_Integer.out) +TESTING examples.datatypes.H5Ex_T_Integer +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Integer > H5Ex_T_Integer.out) if diff H5Ex_T_Integer.out examples.datatypes.H5Ex_T_Integer.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_Integer" else @@ -314,7 +349,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_IntegerAttribute" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_IntegerAttribute > H5Ex_T_IntegerAttribute.out) +TESTING examples.datatypes.H5Ex_T_IntegerAttribute +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_IntegerAttribute > H5Ex_T_IntegerAttribute.out) if diff H5Ex_T_IntegerAttribute.out examples.datatypes.H5Ex_T_IntegerAttribute.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_IntegerAttribute" else @@ -323,7 +359,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_ObjectReference" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_ObjectReference > H5Ex_T_ObjectReference.out) +TESTING examples.datatypes.H5Ex_T_ObjectReference +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_ObjectReference > H5Ex_T_ObjectReference.out) if diff H5Ex_T_ObjectReference.out examples.datatypes.H5Ex_T_ObjectReference.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_ObjectReference" else @@ -332,7 +369,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_ObjectReferenceAttribute" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_ObjectReferenceAttribute > H5Ex_T_ObjectReferenceAttribute.out) +TESTING examples.datatypes.H5Ex_T_ObjectReferenceAttribute +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_ObjectReferenceAttribute > H5Ex_T_ObjectReferenceAttribute.out) if diff H5Ex_T_ObjectReferenceAttribute.out examples.datatypes.H5Ex_T_ObjectReferenceAttribute.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_ObjectReferenceAttribute" else @@ -341,7 +379,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Opaque" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Opaque > H5Ex_T_Opaque.out) +TESTING examples.datatypes.H5Ex_T_Opaque +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_Opaque > H5Ex_T_Opaque.out) if diff H5Ex_T_Opaque.out examples.datatypes.H5Ex_T_Opaque.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_Opaque" else @@ -350,7 +389,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_OpaqueAttribute" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_OpaqueAttribute > H5Ex_T_OpaqueAttribute.out) +TESTING examples.datatypes.H5Ex_T_OpaqueAttribute +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_OpaqueAttribute > H5Ex_T_OpaqueAttribute.out) if diff H5Ex_T_OpaqueAttribute.out examples.datatypes.H5Ex_T_OpaqueAttribute.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_OpaqueAttribute" else @@ -359,7 +399,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_String" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_String > H5Ex_T_String.out) +TESTING examples.datatypes.H5Ex_T_String +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_String > H5Ex_T_String.out) if diff H5Ex_T_String.out examples.datatypes.H5Ex_T_String.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_String" else @@ -368,7 +409,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_StringAttribute" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_StringAttribute > H5Ex_T_StringAttribute.out) +TESTING examples.datatypes.H5Ex_T_StringAttribute +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_StringAttribute > H5Ex_T_StringAttribute.out) if diff H5Ex_T_StringAttribute.out examples.datatypes.H5Ex_T_StringAttribute.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_StringAttribute" else @@ -377,7 +419,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_VLString" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_VLString > H5Ex_T_VLString.out) +TESTING examples.datatypes.H5Ex_T_VLString +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.datatypes.H5Ex_T_VLString > H5Ex_T_VLString.out) if diff H5Ex_T_VLString.out examples.datatypes.H5Ex_T_VLString.txt > /dev/null; then echo " PASSED datatypes.H5Ex_T_VLString" else diff --git a/java/examples/datatypes/Makefile.am b/java/examples/datatypes/Makefile.am index 71f7769..f695528 100644 --- a/java/examples/datatypes/Makefile.am +++ b/java/examples/datatypes/Makefile.am @@ -28,13 +28,13 @@ classes: pkgpath = examples/datatypes hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar -CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.5.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.5.jar:$$CLASSPATH +CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.25.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.25.jar:$$CLASSPATH jarfile = jar$(PACKAGE_TARNAME)datatypes.jar AM_JAVACFLAGS = $(H5_JAVACFLAGS) -deprecation -TESTPACKAGE = +TESTPACKAGE = noinst_JAVA = \ H5Ex_T_Array.java \ @@ -63,10 +63,10 @@ noinst_DATA = $(jarfile) .PHONY: classes -check_SCRIPTS = runExample.sh +check_SCRIPTS = JavaDatatypeExample.sh TEST_SCRIPT = $(check_SCRIPTS) -CLEANFILES = classnoinst.stamp $(jarfile) $(JAVAROOT)/$(pkgpath)/*.class runExample.sh +CLEANFILES = classnoinst.stamp $(jarfile) $(JAVAROOT)/$(pkgpath)/*.class JavaDatatypeExample.sh clean: rm -rf $(JAVAROOT)/* diff --git a/java/examples/groups/CMakeLists.txt b/java/examples/groups/CMakeLists.txt index bb5f80f..c2c7d0f 100644 --- a/java/examples/groups/CMakeLists.txt +++ b/java/examples/groups/CMakeLists.txt @@ -1,13 +1,8 @@ -cmake_minimum_required (VERSION 3.2.2) -PROJECT (HDFJAVA_EXAMPLES_GROUPS Java) +cmake_minimum_required (VERSION 3.12) +project (HDFJAVA_EXAMPLES_GROUPS Java) set (CMAKE_VERBOSE_MAKEFILE 1) -INCLUDE_DIRECTORIES ( - ${HDF5_JAVA_JNI_BINARY_DIR} - ${HDF5_JAVA_HDF5_LIB_DIR} -) - set (HDF_JAVA_EXAMPLES H5Ex_G_Create H5Ex_G_Iterate @@ -18,7 +13,7 @@ set (HDF_JAVA_EXAMPLES H5Ex_G_Visit ) -if (WIN32) +if (WIN32 OR MINGW) set (CMAKE_JAVA_INCLUDE_FLAG_SEP ";") else () set (CMAKE_JAVA_INCLUDE_FLAG_SEP ":") @@ -60,69 +55,55 @@ foreach (h5_file ${HDF_JAVA_TEST_FILES}) endforeach () add_custom_target(H5Ex_G_Visit_files ALL COMMENT "Copying files needed by H5Ex_G_Visit tests" DEPENDS ${H5Ex_G_Visit_files_list}) -MACRO (ADD_H5_TEST resultfile resultcode) - if (CMAKE_BUILD_TYPE MATCHES Debug) - if (WIN32) - set (CMD_ARGS "-Dhdf.hdf5lib.H5.loadLibraryName=hdf5_java_D;") - else () - set (CMD_ARGS "-Dhdf.hdf5lib.H5.loadLibraryName=hdf5_java_debug;") - endif () - endif () - add_test ( - NAME JAVA_groups-${resultfile} - COMMAND "${CMAKE_COMMAND}" - -D "TEST_TESTER=${CMAKE_Java_RUNTIME};${CMAKE_Java_RUNTIME_FLAGS}" - -D "TEST_PROGRAM=examples.groups.${resultfile}" - -D "TEST_ARGS:STRING=${CMD_ARGS}${ARGN}" - -D "TEST_CLASSPATH:STRING=${CMAKE_JAVA_CLASSPATH}${CMAKE_JAVA_INCLUDE_FLAG_SEP}${${resultfile}_JAR_FILE}" - -D "TEST_LIBRARY_DIRECTORY=${CMAKE_TEST_OUTPUT_DIRECTORY}" - -D "TEST_FOLDER=${HDFJAVA_EXAMPLES_BINARY_DIR}" - -D "TEST_OUTPUT=groups/${resultfile}.out" - -D "TEST_EXPECT=${resultcode}" - -D "TEST_REFERENCE=groups/${resultfile}.txt" - -P "${HDF_RESOURCES_DIR}/jrunTest.cmake" - ) - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (JAVA_groups-${resultfile} PROPERTIES DEPENDS ${last_test}) - endif () - set (last_test "JAVA_groups-${resultfile}") -ENDMACRO () +if (BUILD_TESTING AND HDF5_TEST_EXAMPLES AND HDF5_TEST_SERIAL) + get_property (target_name TARGET ${HDF5_JAVA_JNI_LIB_TARGET} PROPERTY OUTPUT_NAME) + set (CMD_ARGS "-Dhdf.hdf5lib.H5.loadLibraryName=${target_name}$<$<CONFIG:Debug>:${CMAKE_DEBUG_POSTFIX}>;") -if (BUILD_TESTING) foreach (example ${HDF_JAVA_EXAMPLES}) - if (NOT ${example} STREQUAL "H5Ex_G_Iterate" AND NOT ${example} STREQUAL "H5Ex_G_Visit") - if (${example} STREQUAL "H5Ex_G_Compact") + if (NOT example STREQUAL "H5Ex_G_Iterate" AND NOT example STREQUAL "H5Ex_G_Visit") + if (example STREQUAL "H5Ex_G_Compact") add_test ( - NAME JAVA_groups-${example}-clear-h5s - COMMAND ${CMAKE_COMMAND} - -E remove + NAME JAVA_groups-${example}-clear-objects + COMMAND ${CMAKE_COMMAND} -E remove ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}1.h5 ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}2.h5 ) else () add_test ( - NAME JAVA_groups-${example}-clear-h5s - COMMAND ${CMAKE_COMMAND} - -E remove - ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5 + NAME JAVA_groups-${example}-clear-objects + COMMAND ${CMAKE_COMMAND} -E remove ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5 ) endif () - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (JAVA_groups-${example}-clear-h5s PROPERTIES DEPENDS ${last_test}) - endif () - set (last_test "JAVA_groups-${example}-clear-h5s") + else () + add_test ( + NAME JAVA_groups-${example}-clear-objects + COMMAND ${CMAKE_COMMAND} -E echo "${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5 exists" + ) endif () + add_test ( NAME JAVA_groups-${example}-copy-objects - COMMAND ${CMAKE_COMMAND} - -E copy_if_different + COMMAND ${CMAKE_COMMAND} -E copy_if_different ${HDFJAVA_EXAMPLES_SOURCE_DIR}/testfiles/examples.groups.${example}.txt ${HDFJAVA_EXAMPLES_GROUPS_BINARY_DIR}/${example}.txt ) - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (JAVA_groups-${example}-copy-objects PROPERTIES DEPENDS ${last_test}) - endif () - set (last_test "JAVA_groups-${example}-copy-objects") - ADD_H5_TEST (${example} 0) + set_tests_properties (JAVA_groups-${example}-copy-objects PROPERTIES DEPENDS JAVA_groups-${example}-clear-objects) + add_test ( + NAME JAVA_groups-${example} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_TESTER=${CMAKE_Java_RUNTIME};${CMAKE_Java_RUNTIME_FLAGS}" + -D "TEST_PROGRAM=examples.groups.${example}" + -D "TEST_ARGS:STRING=${CMD_ARGS}" + -D "TEST_CLASSPATH:STRING=${CMAKE_JAVA_CLASSPATH}${CMAKE_JAVA_INCLUDE_FLAG_SEP}${${example}_JAR_FILE}" + -D "TEST_LIBRARY_DIRECTORY=${CMAKE_TEST_OUTPUT_DIRECTORY}" + -D "TEST_FOLDER=${HDFJAVA_EXAMPLES_BINARY_DIR}" + -D "TEST_OUTPUT=groups/${example}.out" + -D "TEST_EXPECT=0" + -D "TEST_REFERENCE=groups/${example}.txt" + -P "${HDF_RESOURCES_DIR}/jrunTest.cmake" + ) + set_tests_properties (JAVA_groups-${example} PROPERTIES + DEPENDS JAVA_groups-${example}-copy-objects + ) endforeach () endif () diff --git a/java/examples/groups/H5Ex_G_Intermediate.java b/java/examples/groups/H5Ex_G_Intermediate.java index f7d5a50..e97e5f8 100644 --- a/java/examples/groups/H5Ex_G_Intermediate.java +++ b/java/examples/groups/H5Ex_G_Intermediate.java @@ -19,8 +19,8 @@ package examples.groups; import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; -import hdf.hdf5lib.callbacks.H5O_iterate_cb; import hdf.hdf5lib.callbacks.H5O_iterate_t; +import hdf.hdf5lib.callbacks.H5O_iterate_opdata_t; import hdf.hdf5lib.structs.H5O_info_t; import java.util.ArrayList; @@ -53,9 +53,9 @@ public class H5Ex_G_Intermediate { // Print all the objects in the file_ids to show that intermediate group_ids have been created. System.out.println("Objects in the file_id:"); - // H5O_iterate_t iter_data = null; - H5O_iterate_t iter_data = new H5O_iter_data(); - H5O_iterate_cb iter_cb = new H5O_iter_callback(); + // H5O_iterate_opdata_t iter_data = null; + H5O_iterate_opdata_t iter_data = new H5O_iter_data(); + H5O_iterate_t iter_cb = new H5O_iter_callback(); H5.H5Ovisit(file_id, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_NATIVE, iter_cb, iter_data); } @@ -92,12 +92,12 @@ public class H5Ex_G_Intermediate { } } - private class H5O_iter_data implements H5O_iterate_t { + private class H5O_iter_data implements H5O_iterate_opdata_t { public ArrayList<idata> iterdata = new ArrayList<idata>(); } - private class H5O_iter_callback implements H5O_iterate_cb { - public int callback(long group, String name, H5O_info_t info, H5O_iterate_t op_data) { + private class H5O_iter_callback implements H5O_iterate_t { + public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data) { idata id = new idata(name, info.type); ((H5O_iter_data) op_data).iterdata.add(id); diff --git a/java/examples/groups/H5Ex_G_Iterate.java b/java/examples/groups/H5Ex_G_Iterate.java index 3c9ca82..5acbf65 100644 --- a/java/examples/groups/H5Ex_G_Iterate.java +++ b/java/examples/groups/H5Ex_G_Iterate.java @@ -19,6 +19,7 @@ package examples.groups; import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; +import hdf.hdf5lib.structs.H5O_token_t; import java.util.EnumSet; import java.util.HashMap; @@ -75,8 +76,8 @@ public class H5Ex_G_Iterate { String[] oname = new String[count]; int[] otype = new int[count]; int[] ltype = new int[count]; - long[] orefs = new long[count]; - H5.H5Gget_obj_info_all(file_id, DATASETNAME, oname, otype, ltype, orefs, HDF5Constants.H5_INDEX_NAME); + H5O_token_t[] otokens = new H5O_token_t[count]; + H5.H5Gget_obj_info_all(file_id, DATASETNAME, oname, otype, ltype, otokens, HDF5Constants.H5_INDEX_NAME); // Get type of the object and display its name and type. for (int indx = 0; indx < otype.length; indx++) { diff --git a/java/examples/groups/H5Ex_G_Traverse.java b/java/examples/groups/H5Ex_G_Traverse.java index 2a2cba3..6225a9e 100644 --- a/java/examples/groups/H5Ex_G_Traverse.java +++ b/java/examples/groups/H5Ex_G_Traverse.java @@ -25,22 +25,22 @@ package examples.groups; import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; -import hdf.hdf5lib.callbacks.H5L_iterate_cb; import hdf.hdf5lib.callbacks.H5L_iterate_t; +import hdf.hdf5lib.callbacks.H5L_iterate_opdata_t; import hdf.hdf5lib.structs.H5L_info_t; import hdf.hdf5lib.structs.H5O_info_t; import examples.groups.H5Ex_G_Iterate.H5O_type; -class opdata implements H5L_iterate_t { +class opdata implements H5L_iterate_opdata_t { int recurs; opdata prev; - long addr; + H5O_token_t obj_token; } public class H5Ex_G_Traverse { private static String FILE = "h5ex_g_traverse.h5"; - public static H5L_iterate_cb iter_cb = new H5L_iter_callbackT(); + public static H5L_iterate_t iter_cb = new H5L_iter_callbackT(); private static void OpenGroup() { long file_id = -1; @@ -54,7 +54,7 @@ public class H5Ex_G_Traverse { infobuf = H5.H5Oget_info(file_id); od.recurs = 0; od.prev = null; - od.addr = infobuf.addr; + od.obj_token = infobuf.token; } } catch (Exception e) { @@ -64,7 +64,7 @@ public class H5Ex_G_Traverse { // Print the root group and formatting, begin iteration. try { System.out.println("/ {"); - // H5L_iterate_cb iter_cb = new H5L_iter_callbackT(); + // H5L_iterate_t iter_cb = new H5L_iter_callbackT(); H5.H5Literate(file_id, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_NATIVE, 0L, iter_cb, od); System.out.println("}"); } @@ -87,8 +87,8 @@ public class H5Ex_G_Traverse { } } -class H5L_iter_callbackT implements H5L_iterate_cb { - public int callback(long group, String name, H5L_info_t info, H5L_iterate_t op_data) { +class H5L_iter_callbackT implements H5L_iterate_t { + public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) { H5O_info_t infobuf; int return_val = 0; @@ -105,7 +105,7 @@ class H5L_iter_callbackT implements H5L_iterate_cb { switch (H5O_type.get(infobuf.type)) { case H5O_TYPE_GROUP: System.out.println("Group: " + name + " { "); - // Check group address against linked list of operator + // Check group object token against linked list of operator // data structures. We will always run the check, as the // reference count cannot be relied upon if there are // symbolic links, and H5Oget_info_by_name always follows @@ -114,7 +114,7 @@ class H5L_iter_callbackT implements H5L_iterate_cb { // links, however it could still fail if an object's // reference count was manually manipulated with // H5Odecr_refcount. - if (group_check(od, infobuf.addr)) { + if (group_check(od, infobuf.token)) { for (int i = 0; i < spaces; i++) System.out.print(" "); System.out.println(" Warning: Loop detected!"); @@ -127,8 +127,8 @@ class H5L_iter_callbackT implements H5L_iterate_cb { opdata nextod = new opdata(); nextod.recurs = od.recurs + 1; nextod.prev = od; - nextod.addr = infobuf.addr; - H5L_iterate_cb iter_cb2 = new H5L_iter_callbackT(); + nextod.obj_token = infobuf.token; + H5L_iterate_t iter_cb2 = new H5L_iter_callbackT(); return_val = H5.H5Literate_by_name(group, name, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_NATIVE, 0L, iter_cb2, nextod, HDF5Constants.H5P_DEFAULT); } @@ -153,13 +153,13 @@ class H5L_iter_callbackT implements H5L_iterate_cb { return return_val; } - public boolean group_check(opdata od, long target_addr) { - if (od.addr == target_addr) - return true; // Addresses match + public boolean group_check(opdata od, H5O_token_t target_token) { + if (od.obj_token.equals(target_token)) + return true; // Object tokens match else if (od.recurs == 0) return false; // Root group reached with no matches else - return group_check(od.prev, target_addr); // Recursively examine the next node + return group_check(od.prev, target_token); // Recursively examine the next node } } diff --git a/java/examples/groups/H5Ex_G_Visit.java b/java/examples/groups/H5Ex_G_Visit.java index f91c707..4255316 100644 --- a/java/examples/groups/H5Ex_G_Visit.java +++ b/java/examples/groups/H5Ex_G_Visit.java @@ -23,10 +23,10 @@ package examples.groups; import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; -import hdf.hdf5lib.callbacks.H5L_iterate_cb; import hdf.hdf5lib.callbacks.H5L_iterate_t; -import hdf.hdf5lib.callbacks.H5O_iterate_cb; +import hdf.hdf5lib.callbacks.H5L_iterate_opdata_t; import hdf.hdf5lib.callbacks.H5O_iterate_t; +import hdf.hdf5lib.callbacks.H5O_iterate_opdata_t; import hdf.hdf5lib.structs.H5L_info_t; import hdf.hdf5lib.structs.H5O_info_t; @@ -55,13 +55,13 @@ public class H5Ex_G_Visit { // Begin iteration using H5Ovisit System.out.println("Objects in the file:"); - H5O_iterate_t iter_data = new H5O_iter_data(); - H5O_iterate_cb iter_cb = new H5O_iter_callback(); + H5O_iterate_opdata_t iter_data = new H5O_iter_data(); + H5O_iterate_t iter_cb = new H5O_iter_callback(); H5.H5Ovisit(file_id, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_NATIVE, iter_cb, iter_data); System.out.println(); // Repeat the same process using H5Lvisit - H5L_iterate_t iter_data2 = new H5L_iter_data(); - H5L_iterate_cb iter_cb2 = new H5L_iter_callback(); + H5L_iterate_opdata_t iter_data2 = new H5L_iter_data(); + H5L_iterate_t iter_cb2 = new H5L_iter_callback(); System.out.println("Links in the file:"); H5.H5Lvisit(file_id, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_NATIVE, iter_cb2, iter_data2); @@ -91,12 +91,12 @@ public class H5Ex_G_Visit { } } - private class H5L_iter_data implements H5L_iterate_t { + private class H5L_iter_data implements H5L_iterate_opdata_t { public ArrayList<idata> iterdata = new ArrayList<idata>(); } - private class H5L_iter_callback implements H5L_iterate_cb { - public int callback(long group, String name, H5L_info_t info, H5L_iterate_t op_data) { + private class H5L_iter_callback implements H5L_iterate_t { + public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) { idata id = new idata(name, info.type); ((H5L_iter_data) op_data).iterdata.add(id); @@ -107,8 +107,8 @@ public class H5Ex_G_Visit { // Get type of the object and display its name and type. The name of the object is passed to this // function by the Library. infobuf = H5.H5Oget_info_by_name(group, name, HDF5Constants.H5P_DEFAULT); - H5O_iterate_cb iter_cbO = new H5O_iter_callback(); - H5O_iterate_t iter_dataO = new H5O_iter_data(); + H5O_iterate_t iter_cbO = new H5O_iter_callback(); + H5O_iterate_opdata_t iter_dataO = new H5O_iter_data(); ret = iter_cbO.callback(group, name, infobuf, iter_dataO); } catch (Exception e) { @@ -119,12 +119,12 @@ public class H5Ex_G_Visit { } } - private class H5O_iter_data implements H5O_iterate_t { + private class H5O_iter_data implements H5O_iterate_opdata_t { public ArrayList<idata> iterdata = new ArrayList<idata>(); } - private class H5O_iter_callback implements H5O_iterate_cb { - public int callback(long group, String name, H5O_info_t info, H5O_iterate_t op_data) { + private class H5O_iter_callback implements H5O_iterate_t { + public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data) { idata id = new idata(name, info.type); ((H5O_iter_data) op_data).iterdata.add(id); diff --git a/java/examples/groups/runExample.sh.in b/java/examples/groups/JavaGroupExample.sh.in index 3732e7f..acc606f 100644 --- a/java/examples/groups/runExample.sh.in +++ b/java/examples/groups/JavaGroupExample.sh.in @@ -34,13 +34,13 @@ nerrors=0 # where the libs exist HDFLIB_HOME="$top_srcdir/java/lib" BLDLIBDIR="$top_builddir/hdf5/lib" -BLDREFDIR="./groups" +BLDITERDIR="./groups" BLDDIR="." HDFTEST_HOME="$top_srcdir/java/examples/groups" JARFILE=jar@PACKAGE_TARNAME@-@PACKAGE_VERSION@.jar TESTJARFILE=jar@PACKAGE_TARNAME@groups.jar test -d $BLDLIBDIR || mkdir -p $BLDLIBDIR -test -d $BLDREFDIR || mkdir -p $BLDREFDIR +test -d $BLDITERDIR || mkdir -p $BLDITERDIR ###################################################################### # library files @@ -51,13 +51,15 @@ test -d $BLDREFDIR || mkdir -p $BLDREFDIR # Comment '#' without space can be used. # -------------------------------------------------------------------- LIST_LIBRARY_FILES=" -$HDFLIB_HOME/slf4j-api-1.7.5.jar -$HDFLIB_HOME/ext/slf4j-simple-1.7.5.jar $top_builddir/src/.libs/libhdf5.* $top_builddir/java/src/jni/.libs/libhdf5_java.* $top_builddir/java/src/$JARFILE " -LIST_REF_FILES=" +LIST_JAR_TESTFILES=" +$HDFLIB_HOME/slf4j-api-1.7.25.jar +$HDFLIB_HOME/ext/slf4j-simple-1.7.25.jar +" +LIST_ITER_FILES=" $HDFTEST_HOME/h5ex_g_iterate.h5 $HDFTEST_HOME/h5ex_g_visit.h5 " @@ -75,6 +77,7 @@ $HDFTEST_HOME/../testfiles/examples.groups.H5Ex_G_Visit.txt # copy files from source dirs to test dir # COPY_LIBFILES="$LIST_LIBRARY_FILES" +COPY_JARTESTFILES="$LIST_JAR_TESTFILES" COPY_LIBFILES_TO_BLDLIBDIR() { @@ -102,6 +105,30 @@ COPY_LIBFILES_TO_BLDLIBDIR() fi fi done + # copy jar files. Used -f to make sure get a new copy + for tstfile in $COPY_JARTESTFILES + do + # ignore '#' comment + echo $tstfile | tr -d ' ' | grep '^#' > /dev/null + RET=$? + if [ $RET -eq 1 ]; then + # skip cp if srcdir is same as destdir + # this occurs when build/test performed in source dir and + # make cp fail + SDIR=`$DIRNAME $tstfile` + INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` + INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` + if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then + $CP -f $tstfile $BLDLIBDIR + if [ $? -ne 0 ]; then + echo "Error: FAILED to copy $tstfile ." + + # Comment out this to CREATE expected file + exit $EXIT_FAILURE + fi + fi + fi + done } CLEAN_LIBFILES_AND_BLDLIBDIR() @@ -109,11 +136,14 @@ CLEAN_LIBFILES_AND_BLDLIBDIR() # skip rm if srcdir is same as destdir # this occurs when build/test performed in source dir and # make cp fail - SDIR=`$DIRNAME $HDFLIB_HOME/slf4j-api-1.7.5.jar` + SDIR=$HDFLIB_HOME INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $RM $BLDLIBDIR + for tstfile in $COPY_JARTESTFILES + do + $RM $BLDLIBDIR/tstfile + done fi } @@ -149,24 +179,17 @@ COPY_DATAFILES_TO_BLDDIR() CLEAN_DATAFILES_AND_BLDDIR() { - $RM $BLDDIR/examples.groups.H5Ex_G_*.txt - $RM $BLDDIR/H5Ex_G_*.out - $RM $BLDDIR/H5Ex_G_*.h5 - SDIR=`$DIRNAME $tstfile` - INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` - INODE_DDIR=`$LS -i -d $BLDDIR | $AWK -F' ' '{print $1}'` - if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then SDIR=`$DIRNAME $tstfile` - $RM $BLDDIR/h5ex_g_iterate.h5 - $RM $BLDDIR/h5ex_g_visit.h5 - fi + $RM $BLDDIR/examples.groups.H5Ex_G_*.txt + $RM $BLDDIR/H5Ex_G_*.out + $RM $BLDDIR/H5Ex_G_*.h5 } -COPY_REFFILES="$LIST_REF_FILES" +COPY_ITERFILES="$LIST_ITER_FILES" -COPY_REFFILES_TO_BLDREFDIR() +COPY_ITERFILES_TO_BLDITERDIR() { # copy test files. Used -f to make sure get a new copy - for tstfile in $COPY_REFFILES + for tstfile in $COPY_ITERFILES do # ignore '#' comment echo $tstfile | tr -d ' ' | grep '^#' > /dev/null @@ -177,9 +200,9 @@ COPY_REFFILES_TO_BLDREFDIR() # make cp fail SDIR=`$DIRNAME $tstfile` INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` - INODE_DDIR=`$LS -i -d $BLDREFDIR | $AWK -F' ' '{print $1}'` + INODE_DDIR=`$LS -i -d $BLDITERDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $CP -f $tstfile $BLDREFDIR + $CP -f $tstfile $BLDITERDIR if [ $? -ne 0 ]; then echo "Error: FAILED to copy $tstfile ." @@ -191,16 +214,16 @@ COPY_REFFILES_TO_BLDREFDIR() done } -CLEAN_REFFILES_AND_BLDREFDIR() +CLEAN_ITERFILES_AND_BLDITERDIR() { # skip rm if srcdir is same as destdir # this occurs when build/test performed in source dir and # make cp fail SDIR=`$DIRNAME $HDFTEST_HOME/h5ex_g_iterate.h5` INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` - INODE_DDIR=`$LS -i -d $BLDREFDIR | $AWK -F' ' '{print $1}'` + INODE_DDIR=`$LS -i -d $BLDITERDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $RM $BLDREFDIR + $RM $BLDITERDIR fi } @@ -223,9 +246,9 @@ JAVAEXEFLAGS=@H5_JAVAFLAGS@ # prepare for test COPY_LIBFILES_TO_BLDLIBDIR COPY_DATAFILES_TO_BLDDIR -COPY_REFFILES_TO_BLDREFDIR +COPY_ITERFILES_TO_BLDITERDIR -CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.5.jar:"$BLDLIBDIR"/slf4j-simple-1.7.5.jar:"$TESTJARFILE"" +CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.25.jar:"$BLDLIBDIR"/slf4j-simple-1.7.25.jar:"$TESTJARFILE"" TEST=/usr/bin/test if [ ! -x /usr/bin/test ] @@ -257,11 +280,6 @@ if $TEST -z "$LD_LIBRARY_PATH" ; then fi case $os_name in - Darwin) - DYLD_LIBRARY_PATH=$BLDLIBDIR:$DYLD_LIBRARY_PATH - export DYLD_LIBRARY_PATH - LD_LIBRARY_PATH=$DYLD_LIBRARY_PATH - ;; *) LD_LIBRARY_PATH=$BLDLIBDIR:$LD_LIBRARY_PATH ;; @@ -270,7 +288,8 @@ esac export LD_LIBRARY_PATH echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Create" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Create > H5Ex_G_Create.out) +TESTING examples.groups.H5Ex_G_Create +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Create > H5Ex_G_Create.out) if diff H5Ex_G_Create.out examples.groups.H5Ex_G_Create.txt > /dev/null; then echo " PASSED groups.H5Ex_G_Create" else @@ -279,7 +298,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Iterate" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Iterate > H5Ex_G_Iterate.out) +TESTING examples.groups.H5Ex_G_Iterate +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Iterate > H5Ex_G_Iterate.out) if diff H5Ex_G_Iterate.out examples.groups.H5Ex_G_Iterate.txt > /dev/null; then echo " PASSED groups.H5Ex_G_Iterate" else @@ -288,7 +308,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Compact" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Compact > H5Ex_G_Compact.out) +TESTING examples.groups.H5Ex_G_Compact +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Compact > H5Ex_G_Compact.out) if diff H5Ex_G_Compact.out examples.groups.H5Ex_G_Compact.txt > /dev/null; then echo " PASSED groups.H5Ex_G_Compact" else @@ -297,7 +318,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Corder" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Corder > H5Ex_G_Corder.out) +TESTING examples.groups.H5Ex_G_Corder +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Corder > H5Ex_G_Corder.out) if diff H5Ex_G_Corder.out examples.groups.H5Ex_G_Corder.txt > /dev/null; then echo " PASSED groups.H5Ex_G_Corder" else @@ -306,7 +328,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Intermediate" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Intermediate > H5Ex_G_Intermediate.out) +TESTING examples.groups.H5Ex_G_Intermediate +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Intermediate > H5Ex_G_Intermediate.out) if diff H5Ex_G_Intermediate.out examples.groups.H5Ex_G_Intermediate.txt > /dev/null; then echo " PASSED groups.H5Ex_G_Intermediate" else @@ -315,7 +338,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Phase" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Phase > H5Ex_G_Phase.out) +TESTING examples.groups.H5Ex_G_Phase +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Phase > H5Ex_G_Phase.out) if diff H5Ex_G_Phase.out examples.groups.H5Ex_G_Phase.txt > /dev/null; then echo " PASSED groups.H5Ex_G_Phase" else @@ -324,7 +348,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Visit" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Visit > H5Ex_G_Visit.out) +TESTING examples.groups.H5Ex_G_Visit +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.groups.H5Ex_G_Visit > H5Ex_G_Visit.out) if diff H5Ex_G_Visit.out examples.groups.H5Ex_G_Visit.txt > /dev/null; then echo " PASSED groups.H5Ex_G_Visit" else @@ -333,9 +358,9 @@ else fi # Clean up temporary files/directories +CLEAN_ITERFILES_AND_BLDITERDIR CLEAN_LIBFILES_AND_BLDLIBDIR CLEAN_DATAFILES_AND_BLDDIR -CLEAN_REFFILES_AND_BLDREFDIR # Report test results and exit if test $nerrors -eq 0 ; then diff --git a/java/examples/groups/Makefile.am b/java/examples/groups/Makefile.am index 08721e0..d5824e8 100644 --- a/java/examples/groups/Makefile.am +++ b/java/examples/groups/Makefile.am @@ -28,13 +28,13 @@ classes: pkgpath = examples/groups hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar -CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.5.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.5.jar:$$CLASSPATH +CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.25.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.25.jar:$$CLASSPATH jarfile = jar$(PACKAGE_TARNAME)groups.jar AM_JAVACFLAGS = $(H5_JAVACFLAGS) -deprecation -TESTPACKAGE = +TESTPACKAGE = noinst_JAVA = \ H5Ex_G_Create.java \ @@ -53,10 +53,10 @@ noinst_DATA = $(jarfile) .PHONY: classes -check_SCRIPTS = runExample.sh +check_SCRIPTS = JavaGroupExample.sh TEST_SCRIPT = $(check_SCRIPTS) -CLEANFILES = classnoinst.stamp $(jarfile) $(JAVAROOT)/$(pkgpath)/*.class runExample.sh +CLEANFILES = classnoinst.stamp $(jarfile) $(JAVAROOT)/$(pkgpath)/*.class JavaGroupExample.sh clean: rm -rf $(JAVAROOT)/* diff --git a/java/examples/intro/CMakeLists.txt b/java/examples/intro/CMakeLists.txt index 9dc4dd7..6cb1e16 100644 --- a/java/examples/intro/CMakeLists.txt +++ b/java/examples/intro/CMakeLists.txt @@ -1,13 +1,8 @@ -cmake_minimum_required (VERSION 3.2.2) -PROJECT (HDFJAVA_EXAMPLES_INTRO Java) +cmake_minimum_required (VERSION 3.12) +project (HDFJAVA_EXAMPLES_INTRO Java) set (CMAKE_VERBOSE_MAKEFILE 1) -INCLUDE_DIRECTORIES ( - ${HDF5_JAVA_JNI_BINARY_DIR} - ${HDF5_JAVA_HDF5_LIB_DIR} -) - set (HDF_JAVA_EXAMPLES H5_CreateAttribute H5_CreateDataset @@ -18,7 +13,7 @@ set (HDF_JAVA_EXAMPLES H5_ReadWrite ) -if (WIN32) +if (WIN32 OR MINGW) set (CMAKE_JAVA_INCLUDE_FLAG_SEP ";") else () set (CMAKE_JAVA_INCLUDE_FLAG_SEP ":") @@ -50,68 +45,41 @@ foreach (HDFJAVA_JAR ${CMAKE_JAVA_INCLUDE_PATH}) set (CMAKE_JAVA_CLASSPATH "${CMAKE_JAVA_CLASSPATH}${CMAKE_JAVA_INCLUDE_FLAG_SEP}${HDFJAVA_JAR}") endforeach () -foreach (example ${HDF_JAVA_OBJECT_EXAMPLES}) - file (WRITE ${PROJECT_BINARY_DIR}/${example}_Manifest.txt - "Main-Class: examples.intro.${example} -" - ) - add_jar (${example} MANIFEST ${PROJECT_BINARY_DIR}/${example}_Manifest.txt ${example}.java) - get_target_property (${example}_JAR_FILE ${example} JAR_FILE) -# install_jar (${example} ${HJAVA_INSTALL_DATA_DIR}/examples examples) - get_target_property (${example}_CLASSPATH ${example} CLASSDIR) - add_dependencies (${example} ${HDFJAVA_H5_LIB_TARGET}) -endforeach () - -MACRO (ADD_H5_TEST resultfile resultcode) - if (CMAKE_BUILD_TYPE MATCHES Debug) - if (WIN32) - set (CMD_ARGS "-Dhdf.hdf5lib.H5.loadLibraryName=hdf5_java_D;") - else () - set (CMD_ARGS "-Dhdf.hdf5lib.H5.loadLibraryName=hdf5_java_debug;") - endif () - endif () - add_test ( - NAME JAVA_intro-${resultfile} - COMMAND "${CMAKE_COMMAND}" - -D "TEST_TESTER=${CMAKE_Java_RUNTIME};${CMAKE_Java_RUNTIME_FLAGS}" - -D "TEST_PROGRAM=examples.intro.${resultfile}" - -D "TEST_ARGS:STRING=${CMD_ARGS}${ARGN}" - -D "TEST_CLASSPATH:STRING=${CMAKE_JAVA_CLASSPATH}${CMAKE_JAVA_INCLUDE_FLAG_SEP}${${resultfile}_JAR_FILE}" - -D "TEST_LIBRARY_DIRECTORY=${CMAKE_TEST_OUTPUT_DIRECTORY}" - -D "TEST_FOLDER=${HDFJAVA_EXAMPLES_BINARY_DIR}" - -D "TEST_OUTPUT=intro/${resultfile}.out" - -D "TEST_EXPECT=${resultcode}" - -D "TEST_REFERENCE=intro/${resultfile}.txt" - -P "${HDF_RESOURCES_DIR}/jrunTest.cmake" - ) - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (JAVA_intro-${resultfile} PROPERTIES DEPENDS ${last_test}) - endif () - set (last_test "JAVA_intro-${resultfile}") -ENDMACRO () - -if (BUILD_TESTING) +if (BUILD_TESTING AND HDF5_TEST_EXAMPLES AND HDF5_TEST_SERIAL) + get_property (target_name TARGET ${HDF5_JAVA_JNI_LIB_TARGET} PROPERTY OUTPUT_NAME) + set (CMD_ARGS "-Dhdf.hdf5lib.H5.loadLibraryName=${target_name}$<$<CONFIG:Debug>:${CMAKE_DEBUG_POSTFIX}>;") foreach (example ${HDF_JAVA_EXAMPLES}) add_test ( NAME JAVA_intro-${example}-clear-objects - COMMAND ${CMAKE_COMMAND} - -E remove - ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5 + COMMAND ${CMAKE_COMMAND} -E remove ${HDFJAVA_EXAMPLES_BINARY_DIR}/${example}.h5 ) - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (JAVA_intro-${example}-clear-objects PROPERTIES DEPENDS ${last_test}) - endif () + add_test ( NAME JAVA_intro-${example}-copy-objects - COMMAND ${CMAKE_COMMAND} - -E copy_if_different + COMMAND ${CMAKE_COMMAND} -E copy_if_different ${HDFJAVA_EXAMPLES_SOURCE_DIR}/testfiles/examples.intro.${example}.txt ${HDFJAVA_EXAMPLES_INTRO_BINARY_DIR}/${example}.txt ) set_tests_properties (JAVA_intro-${example}-copy-objects PROPERTIES DEPENDS JAVA_intro-${example}-clear-objects) - set (last_test "JAVA_intro-${example}-copy-objects") - ADD_H5_TEST (${example} 0) + + add_test ( + NAME JAVA_intro-${example} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_TESTER=${CMAKE_Java_RUNTIME};${CMAKE_Java_RUNTIME_FLAGS}" + -D "TEST_PROGRAM=examples.intro.${example}" + -D "TEST_ARGS:STRING=${CMD_ARGS}" + -D "TEST_CLASSPATH:STRING=${CMAKE_JAVA_CLASSPATH}${CMAKE_JAVA_INCLUDE_FLAG_SEP}${${example}_JAR_FILE}" + -D "TEST_LIBRARY_DIRECTORY=${CMAKE_TEST_OUTPUT_DIRECTORY}" + -D "TEST_FOLDER=${HDFJAVA_EXAMPLES_BINARY_DIR}" + -D "TEST_OUTPUT=intro/${example}.out" + -D "TEST_EXPECT=0" + -D "TEST_REFERENCE=intro/${example}.txt" + -P "${HDF_RESOURCES_DIR}/jrunTest.cmake" + ) + set_tests_properties (JAVA_intro-${example} PROPERTIES + DEPENDS JAVA_intro-${example}-copy-objects + ) endforeach () endif () diff --git a/java/examples/intro/runExample.sh.in b/java/examples/intro/JavaIntroExample.sh.in index 4533a1b..1886485 100644 --- a/java/examples/intro/runExample.sh.in +++ b/java/examples/intro/JavaIntroExample.sh.in @@ -49,12 +49,14 @@ test -d $BLDLIBDIR || mkdir -p $BLDLIBDIR # Comment '#' without space can be used. # -------------------------------------------------------------------- LIST_LIBRARY_FILES=" -$HDFLIB_HOME/slf4j-api-1.7.5.jar -$HDFLIB_HOME/ext/slf4j-simple-1.7.5.jar $top_builddir/src/.libs/libhdf5.* $top_builddir/java/src/jni/.libs/libhdf5_java.* $top_builddir/java/src/$JARFILE " +LIST_JAR_TESTFILES=" +$HDFLIB_HOME/slf4j-api-1.7.25.jar +$HDFLIB_HOME/ext/slf4j-simple-1.7.25.jar +" LIST_DATA_FILES=" $HDFTEST_HOME/../testfiles/examples.intro.H5_CreateDataset.txt $HDFTEST_HOME/../testfiles/examples.intro.H5_CreateAttribute.txt @@ -69,6 +71,7 @@ $HDFTEST_HOME/../testfiles/examples.intro.H5_ReadWrite.txt # copy files from source dirs to test dir # COPY_LIBFILES="$LIST_LIBRARY_FILES" +COPY_JARTESTFILES="$LIST_JAR_TESTFILES" COPY_LIBFILES_TO_BLDLIBDIR() { @@ -96,6 +99,30 @@ COPY_LIBFILES_TO_BLDLIBDIR() fi fi done + # copy jar files. Used -f to make sure get a new copy + for tstfile in $COPY_JARTESTFILES + do + # ignore '#' comment + echo $tstfile | tr -d ' ' | grep '^#' > /dev/null + RET=$? + if [ $RET -eq 1 ]; then + # skip cp if srcdir is same as destdir + # this occurs when build/test performed in source dir and + # make cp fail + SDIR=`$DIRNAME $tstfile` + INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` + INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` + if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then + $CP -f $tstfile $BLDLIBDIR + if [ $? -ne 0 ]; then + echo "Error: FAILED to copy $tstfile ." + + # Comment out this to CREATE expected file + exit $EXIT_FAILURE + fi + fi + fi + done } CLEAN_LIBFILES_AND_BLDLIBDIR() @@ -103,11 +130,14 @@ CLEAN_LIBFILES_AND_BLDLIBDIR() # skip rm if srcdir is same as destdir # this occurs when build/test performed in source dir and # make cp fail - SDIR=`$DIRNAME $HDFLIB_HOME/slf4j-api-1.7.5.jar` + SDIR=$HDFLIB_HOME INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $RM $BLDLIBDIR + for tstfile in $COPY_JARTESTFILES + do + $RM $BLDLIBDIR/tstfile + done fi } @@ -168,7 +198,7 @@ JAVAEXEFLAGS=@H5_JAVAFLAGS@ COPY_LIBFILES_TO_BLDLIBDIR COPY_DATAFILES_TO_BLDDIR -CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.5.jar:"$BLDLIBDIR"/slf4j-simple-1.7.5.jar:"$TESTJARFILE"" +CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.25.jar:"$BLDLIBDIR"/slf4j-simple-1.7.25.jar:"$TESTJARFILE"" TEST=/usr/bin/test if [ ! -x /usr/bin/test ] @@ -200,11 +230,6 @@ if $TEST -z "$LD_LIBRARY_PATH" ; then fi case $os_name in - Darwin) - DYLD_LIBRARY_PATH=$BLDLIBDIR:$DYLD_LIBRARY_PATH - export DYLD_LIBRARY_PATH - LD_LIBRARY_PATH=$DYLD_LIBRARY_PATH - ;; *) LD_LIBRARY_PATH=$BLDLIBDIR:$LD_LIBRARY_PATH ;; @@ -213,7 +238,8 @@ esac export LD_LIBRARY_PATH echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateDataset" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateDataset > H5_CreateDataset.out) +TESTING examples.intro.H5_CreateDataset +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateDataset > H5_CreateDataset.out) if diff H5_CreateDataset.out examples.intro.H5_CreateDataset.txt > /dev/null; then echo " PASSED intro.H5_CreateDataset" else @@ -222,7 +248,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateAttribute" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateAttribute > H5_CreateAttribute.out) +TESTING examples.intro.H5_CreateAttribute +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateAttribute > H5_CreateAttribute.out) if diff H5_CreateAttribute.out examples.intro.H5_CreateAttribute.txt > /dev/null; then echo " PASSED intro.H5_CreateAttribute" else @@ -231,7 +258,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateFile" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateFile > H5_CreateFile.out) +TESTING examples.intro.H5_CreateFile +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateFile > H5_CreateFile.out) if diff H5_CreateFile.out examples.intro.H5_CreateFile.txt > /dev/null; then echo " PASSED intro.H5_CreateFile" else @@ -240,7 +268,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateGroup" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateGroup > H5_CreateGroup.out) +TESTING examples.intro.H5_CreateGroup +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateGroup > H5_CreateGroup.out) if diff H5_CreateGroup.out examples.intro.H5_CreateGroup.txt > /dev/null; then echo " PASSED intro.H5_CreateGroup" else @@ -249,7 +278,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateGroupAbsoluteRelative" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateGroupAbsoluteRelative > H5_CreateGroupAbsoluteRelative.out) +TESTING examples.intro.H5_CreateGroupAbsoluteRelative +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateGroupAbsoluteRelative > H5_CreateGroupAbsoluteRelative.out) if diff H5_CreateGroupAbsoluteRelative.out examples.intro.H5_CreateGroupAbsoluteRelative.txt > /dev/null; then echo " PASSED intro.H5_CreateGroupAbsoluteRelative" else @@ -258,7 +288,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateGroupDataset" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateGroupDataset > H5_CreateGroupDataset.out) +TESTING examples.intro.H5_CreateGroupDataset +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_CreateGroupDataset > H5_CreateGroupDataset.out) if diff H5_CreateGroupDataset.out examples.intro.H5_CreateGroupDataset.txt > /dev/null; then echo " PASSED intro.H5_CreateGroupDataset" else @@ -267,7 +298,8 @@ else fi echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_ReadWrite" -($JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_ReadWrite > H5_ReadWrite.out) +TESTING examples.intro.H5_ReadWrite +($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH examples.intro.H5_ReadWrite > H5_ReadWrite.out) if diff H5_ReadWrite.out examples.intro.H5_ReadWrite.txt > /dev/null; then echo " PASSED intro.H5_ReadWrite" else diff --git a/java/examples/intro/Makefile.am b/java/examples/intro/Makefile.am index 95743d9..8c3716a 100644 --- a/java/examples/intro/Makefile.am +++ b/java/examples/intro/Makefile.am @@ -28,13 +28,13 @@ classes: pkgpath = examples/intro hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar -CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.5.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.5.jar:$$CLASSPATH +CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.25.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.25.jar:$$CLASSPATH jarfile = jar$(PACKAGE_TARNAME)intro.jar AM_JAVACFLAGS = $(H5_JAVACFLAGS) -deprecation -TESTPACKAGE = +TESTPACKAGE = noinst_JAVA = \ H5_CreateAttribute.java \ @@ -52,10 +52,10 @@ noinst_DATA = $(jarfile) .PHONY: classes -check_SCRIPTS = runExample.sh +check_SCRIPTS = JavaIntroExample.sh TEST_SCRIPT = $(check_SCRIPTS) -CLEANFILES = classnoinst.stamp $(jarfile) $(JAVAROOT)/$(pkgpath)/*.class runExample.sh +CLEANFILES = classnoinst.stamp $(jarfile) $(JAVAROOT)/$(pkgpath)/*.class JavaIntroExample.sh clean: rm -rf $(JAVAROOT)/* |