Merge pull request #1123 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop

* commit 'b1f5c9e9d63e16d67089f08ef2becc5119592a76':
  Fix ptr arith
  Correct function call
  Remove writeVL option
  Region reference in compounds need class check
  Correct cast formatting
  Correct var name
  Need to cast from void ptr
  Update Java util lib, Refactor H5D write VL to match read

8 files changed, 20 insertions, 20 deletions

diff --git a/java/examples/datasets/JavaDatasetExample.sh.in b/java/examples/datasets/JavaDatasetExample.sh.in
index 740b07d..cb16d45 100644
--- a/java/examples/datasets/JavaDatasetExample.sh.in
+++ b/java/examples/datasets/JavaDatasetExample.sh.in
@@ -52,8 +52,8 @@ test -d $BLDLIBDIR || mkdir -p $BLDLIBDIR
 #       Comment '#' without space can be used.
 # --------------------------------------------------------------------
 LIST_LIBRARY_FILES="
-$HDFLIB_HOME/slf4j-api-1.7.5.jar
-$HDFLIB_HOME/ext/slf4j-simple-1.7.5.jar
+$HDFLIB_HOME/slf4j-api-1.7.25.jar
+$HDFLIB_HOME/ext/slf4j-simple-1.7.25.jar
 $top_builddir/src/.libs/libhdf5.*
 $top_builddir/java/src/jni/.libs/libhdf5_java.*
 $top_builddir/java/src/$JARFILE
@@ -117,7 +117,7 @@ CLEAN_LIBFILES_AND_BLDLIBDIR()
     # skip rm if srcdir is same as destdir
     # this occurs when build/test performed in source dir and
     # make cp fail
-    SDIR=`$DIRNAME $HDFLIB_HOME/slf4j-api-1.7.5.jar`
+    SDIR=`$DIRNAME $HDFLIB_HOME/slf4j-api-1.7.25.jar`
     INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'`
     INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'`
     if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then
@@ -183,7 +183,7 @@ JAVAEXEFLAGS=@H5_JAVAFLAGS@
 COPY_LIBFILES_TO_BLDLIBDIR
 COPY_DATAFILES_TO_BLDDIR
 
-CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.5.jar:"$BLDLIBDIR"/slf4j-simple-1.7.5.jar:"$TESTJARFILE""
+CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.25.jar:"$BLDLIBDIR"/slf4j-simple-1.7.25.jar:"$TESTJARFILE""
 
 TEST=/usr/bin/test
 if [ ! -x /usr/bin/test ]
diff --git a/java/examples/datasets/Makefile.am b/java/examples/datasets/Makefile.am
index ddd6d39..b442603 100644
--- a/java/examples/datasets/Makefile.am
+++ b/java/examples/datasets/Makefile.am
@@ -28,7 +28,7 @@ classes:
 
 pkgpath = examples/datasets
 hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar
-CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.5.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.5.jar:$$CLASSPATH
+CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.25.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.25.jar:$$CLASSPATH
 
 jarfile = jar$(PACKAGE_TARNAME)datasets.jar
 
diff --git a/java/examples/datatypes/JavaDatatypeExample.sh.in b/java/examples/datatypes/JavaDatatypeExample.sh.in
index 590a547..033442a 100644
--- a/java/examples/datatypes/JavaDatatypeExample.sh.in
+++ b/java/examples/datatypes/JavaDatatypeExample.sh.in
@@ -49,8 +49,8 @@ test -d $BLDLIBDIR || mkdir -p $BLDLIBDIR
 #       Comment '#' without space can be used.
 # --------------------------------------------------------------------
 LIST_LIBRARY_FILES="
-$HDFLIB_HOME/slf4j-api-1.7.5.jar
-$HDFLIB_HOME/ext/slf4j-simple-1.7.5.jar
+$HDFLIB_HOME/slf4j-api-1.7.25.jar
+$HDFLIB_HOME/ext/slf4j-simple-1.7.25.jar
 $top_builddir/src/.libs/libhdf5.*
 $top_builddir/java/src/jni/.libs/libhdf5_java.*
 $top_builddir/java/src/$JARFILE
@@ -114,7 +114,7 @@ CLEAN_LIBFILES_AND_BLDLIBDIR()
     # skip rm if srcdir is same as destdir
     # this occurs when build/test performed in source dir and
     # make cp fail
-    SDIR=`$DIRNAME $HDFLIB_HOME/slf4j-api-1.7.5.jar`
+    SDIR=`$DIRNAME $HDFLIB_HOME/slf4j-api-1.7.25.jar`
     INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'`
     INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'`
     if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then
@@ -179,7 +179,7 @@ JAVAEXEFLAGS=@H5_JAVAFLAGS@
 COPY_LIBFILES_TO_BLDLIBDIR
 COPY_DATAFILES_TO_BLDDIR
 
-CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.5.jar:"$BLDLIBDIR"/slf4j-simple-1.7.5.jar:"$TESTJARFILE""
+CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.25.jar:"$BLDLIBDIR"/slf4j-simple-1.7.25.jar:"$TESTJARFILE""
 
 TEST=/usr/bin/test
 if [ ! -x /usr/bin/test ]
diff --git a/java/examples/datatypes/Makefile.am b/java/examples/datatypes/Makefile.am
index f6e58f1..5e0e971 100644
--- a/java/examples/datatypes/Makefile.am
+++ b/java/examples/datatypes/Makefile.am
@@ -28,7 +28,7 @@ classes:
 
 pkgpath = examples/datatypes
 hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar
-CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.5.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.5.jar:$$CLASSPATH
+CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.25.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.25.jar:$$CLASSPATH
 
 jarfile = jar$(PACKAGE_TARNAME)datatypes.jar
 
diff --git a/java/examples/groups/JavaGroupExample.sh.in b/java/examples/groups/JavaGroupExample.sh.in
index 53c0045..36df02e 100644
--- a/java/examples/groups/JavaGroupExample.sh.in
+++ b/java/examples/groups/JavaGroupExample.sh.in
@@ -51,8 +51,8 @@ test -d $BLDREFDIR || mkdir -p $BLDREFDIR
 #       Comment '#' without space can be used.
 # --------------------------------------------------------------------
 LIST_LIBRARY_FILES="
-$HDFLIB_HOME/slf4j-api-1.7.5.jar
-$HDFLIB_HOME/ext/slf4j-simple-1.7.5.jar
+$HDFLIB_HOME/slf4j-api-1.7.25.jar
+$HDFLIB_HOME/ext/slf4j-simple-1.7.25.jar
 $top_builddir/src/.libs/libhdf5.*
 $top_builddir/java/src/jni/.libs/libhdf5_java.*
 $top_builddir/java/src/$JARFILE
@@ -109,7 +109,7 @@ CLEAN_LIBFILES_AND_BLDLIBDIR()
     # skip rm if srcdir is same as destdir
     # this occurs when build/test performed in source dir and
     # make cp fail
-    SDIR=`$DIRNAME $HDFLIB_HOME/slf4j-api-1.7.5.jar`
+    SDIR=`$DIRNAME $HDFLIB_HOME/slf4j-api-1.7.25.jar`
     INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'`
     INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'`
     if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then
@@ -225,7 +225,7 @@ COPY_LIBFILES_TO_BLDLIBDIR
 COPY_DATAFILES_TO_BLDDIR
 COPY_REFFILES_TO_BLDREFDIR
 
-CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.5.jar:"$BLDLIBDIR"/slf4j-simple-1.7.5.jar:"$TESTJARFILE""
+CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.25.jar:"$BLDLIBDIR"/slf4j-simple-1.7.25.jar:"$TESTJARFILE""
 
 TEST=/usr/bin/test
 if [ ! -x /usr/bin/test ]
diff --git a/java/examples/groups/Makefile.am b/java/examples/groups/Makefile.am
index 4da17f9..09df743 100644
--- a/java/examples/groups/Makefile.am
+++ b/java/examples/groups/Makefile.am
@@ -28,7 +28,7 @@ classes:
 
 pkgpath = examples/groups
 hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar
-CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.5.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.5.jar:$$CLASSPATH
+CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.25.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.25.jar:$$CLASSPATH
 
 jarfile = jar$(PACKAGE_TARNAME)groups.jar
 
diff --git a/java/examples/intro/JavaIntroExample.sh.in b/java/examples/intro/JavaIntroExample.sh.in
index 3c3036a..077146d 100644
--- a/java/examples/intro/JavaIntroExample.sh.in
+++ b/java/examples/intro/JavaIntroExample.sh.in
@@ -49,8 +49,8 @@ test -d $BLDLIBDIR || mkdir -p $BLDLIBDIR
 #       Comment '#' without space can be used.
 # --------------------------------------------------------------------
 LIST_LIBRARY_FILES="
-$HDFLIB_HOME/slf4j-api-1.7.5.jar
-$HDFLIB_HOME/ext/slf4j-simple-1.7.5.jar
+$HDFLIB_HOME/slf4j-api-1.7.25.jar
+$HDFLIB_HOME/ext/slf4j-simple-1.7.25.jar
 $top_builddir/src/.libs/libhdf5.*
 $top_builddir/java/src/jni/.libs/libhdf5_java.*
 $top_builddir/java/src/$JARFILE
@@ -103,7 +103,7 @@ CLEAN_LIBFILES_AND_BLDLIBDIR()
     # skip rm if srcdir is same as destdir
     # this occurs when build/test performed in source dir and
     # make cp fail
-    SDIR=`$DIRNAME $HDFLIB_HOME/slf4j-api-1.7.5.jar`
+    SDIR=`$DIRNAME $HDFLIB_HOME/slf4j-api-1.7.25.jar`
     INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'`
     INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'`
     if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then
@@ -168,7 +168,7 @@ JAVAEXEFLAGS=@H5_JAVAFLAGS@
 COPY_LIBFILES_TO_BLDLIBDIR
 COPY_DATAFILES_TO_BLDDIR
 
-CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.5.jar:"$BLDLIBDIR"/slf4j-simple-1.7.5.jar:"$TESTJARFILE""
+CPATH=".:"$BLDLIBDIR"/"$JARFILE":"$BLDLIBDIR"/slf4j-api-1.7.25.jar:"$BLDLIBDIR"/slf4j-simple-1.7.25.jar:"$TESTJARFILE""
 
 TEST=/usr/bin/test
 if [ ! -x /usr/bin/test ]
diff --git a/java/examples/intro/Makefile.am b/java/examples/intro/Makefile.am
index 0df08cb..33f44c2 100644
--- a/java/examples/intro/Makefile.am
+++ b/java/examples/intro/Makefile.am
@@ -28,7 +28,7 @@ classes:
 
 pkgpath = examples/intro
 hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar
-CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.5.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.5.jar:$$CLASSPATH
+CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.25.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.25.jar:$$CLASSPATH
 
 jarfile = jar$(PACKAGE_TARNAME)intro.jar