Merge branch 'develop' into parallel_vds_developinactive/parallel_vds_develop

1 files changed, 1415 insertions, 0 deletions

diff --git a/java/src/jni/h5pDCPLImp.c b/java/src/jni/h5pDCPLImp.c
new file mode 100644
index 0000000..7559c3b
--- /dev/null
+++ b/java/src/jni/h5pDCPLImp.c
@@ -0,0 +1,1415 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group.                                               *
+ * Copyright by the Board of Trustees of the University of Illinois.         *
+ * All rights reserved.                                                      *
+ *                                                                           *
+ * This file is part of HDF5.  The full HDF5 copyright notice, including     *
+ * terms governing use, modification, and redistribution, is contained in    *
+ * the COPYING file, which can be found at the root of the source code       *
+ * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.  *
+ * If you do not have access to either file, you may request a copy from     *
+ * help@hdfgroup.org.                                                        *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/*
+ *  For details of the HDF libraries, see the HDF Documentation at:
+ *    http://hdfgroup.org/HDF5/doc/
+ *
+ */
+
+#ifdef __cplusplus
+extern "C" {
+#endif /* __cplusplus */
+
+#include <stdlib.h>
+#include "hdf5.h"
+#include "h5jni.h"
+#include "h5pDCPLImp.h"
+
+/*
+ * Pointer to the JNI's Virtual Machine; used for callback functions.
+ */
+/* extern JavaVM *jvm; */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_layout
+ * Signature: (JI)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1layout
+    (JNIEnv *env, jclass clss, jlong plist, jint layout)
+{
+    herr_t retVal = FAIL;
+
+    UNUSED(clss);
+
+    if ((retVal = H5Pset_layout((hid_t)plist, (H5D_layout_t)layout)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1layout */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_layout
+ * Signature: (J)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1layout
+    (JNIEnv *env, jclass clss, jlong plist)
+{
+    H5D_layout_t retVal = H5D_LAYOUT_ERROR;
+
+    UNUSED(clss);
+
+    if (H5D_LAYOUT_ERROR == (retVal = H5Pget_layout((hid_t)plist)))
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1layout */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_chunk
+ * Signature: (JI[B)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1chunk
+    (JNIEnv *env, jclass clss, jlong plist, jint ndims, jbyteArray dim)
+{
+    jboolean  isCopy;
+    hsize_t  *da = NULL;
+    hsize_t  *lp = NULL;
+    size_t    i;
+    size_t    rank;
+    jsize     arrLen;
+    jbyte    *theArray = NULL;
+    jlong    *jlp = NULL;
+    herr_t    status = FAIL;
+
+    UNUSED(clss);
+
+    if (ndims < 0)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pset_chunk: ndims < 0");
+    if (NULL == dim)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pset_chunk: dim array is NULL");
+
+    if ((arrLen = ENVPTR->GetArrayLength(ENVONLY, dim)) < 0) {
+        CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pset_chunk: dim array length < 0");
+    }
+
+    rank = (size_t) arrLen / sizeof(jlong);
+    if (rank < (size_t) ndims)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pset_chunk: dims array rank < ndims");
+
+    PIN_BYTE_ARRAY(ENVONLY, dim, theArray, &isCopy, "H5Pset_chunk: dim array not pinned");
+
+    if (NULL == (da = lp = (hsize_t *) HDmalloc(rank * sizeof(hsize_t))))
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pset_chunk: memory allocation failed");
+
+    jlp = (jlong *)theArray;
+    for (i = 0; i < rank; i++) {
+        *lp = (hsize_t)*jlp;
+        lp++;
+        jlp++;
+    } /* end if */
+
+    if ((status = H5Pset_chunk((hid_t)plist, (int)ndims, da)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    if (da)
+        HDfree(da);
+    if (theArray)
+        UNPIN_BYTE_ARRAY(ENVONLY, dim, theArray, JNI_ABORT);
+
+    return (jint)status;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1chunk */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_chunk
+ * Signature: (JI[J)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1chunk
+    (JNIEnv *env, jclass clss, jlong plist, jint max_ndims, jlongArray dims)
+{
+    jboolean  isCopy;
+    hsize_t  *da = NULL;
+    jlong    *theArray = NULL;
+    jsize     arrLen;
+    int       i;
+    herr_t    status = FAIL;
+
+    UNUSED(clss);
+
+    if (NULL == dims)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pget_chunk: dims is NULL");
+
+    if ((arrLen = ENVPTR->GetArrayLength(ENVONLY, dims)) < 0) {
+        CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_chunk: dims array length < 0");
+    }
+    if (arrLen < max_ndims)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_chunk: dims array < max_ndims");
+
+    PIN_LONG_ARRAY(ENVONLY, dims, theArray, &isCopy, "H5Pget_chunk: input dims not pinned");
+
+    if (NULL == (da = (hsize_t *) HDmalloc((size_t)max_ndims * sizeof(hsize_t))))
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_chunk: memory allocation failed");
+
+    if ((status = H5Pget_chunk((hid_t)plist, (int)max_ndims, da)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+    for (i = 0; i < max_ndims; i++)
+        theArray[i] = (jlong)da[i];
+
+done:
+    if (da)
+        HDfree(da);
+    if (theArray)
+        UNPIN_LONG_ARRAY(ENVONLY, dims, theArray, (status < 0) ? JNI_ABORT : 0);
+
+    return (jint)status;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1chunk */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_chunk_opts
+ * Signature: (JI)V
+ */
+JNIEXPORT void JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1chunk_1opts
+    (JNIEnv *env, jclass clss, jlong dcpl_id, jint opts)
+{
+    herr_t retVal = FAIL;
+
+    UNUSED(clss);
+
+    if ((retVal = H5Pset_chunk_opts((hid_t)dcpl_id, (unsigned)opts)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1chunk_1opts */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_chunk_opts
+ * Signature: (J)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1chunk_1opts
+    (JNIEnv *env, jclass clss, jlong dcpl_id)
+{
+    unsigned opts = 0;
+
+    UNUSED(clss);
+
+    if (H5Pget_chunk_opts((hid_t)dcpl_id, &opts) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jint)opts;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1chunk_1opts */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_dset_no_attrs_hint
+ * Signature: (JZ)V
+ */
+JNIEXPORT void JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1dset_1no_1attrs_1hint
+(JNIEnv *env, jclass clss, jlong dcpl_id, jboolean minimize)
+{
+    hbool_t minimize_val;
+    herr_t  retVal = FAIL;
+
+    UNUSED(clss);
+
+    minimize_val = (JNI_TRUE == minimize) ? TRUE : FALSE;
+
+    if ((retVal = H5Pset_dset_no_attrs_hint((hid_t)dcpl_id, (hbool_t)minimize_val)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1dset_1no_1attrs_1hint */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_dset_no_attrs_hint
+ * Signature: (J)Z
+ */
+JNIEXPORT jboolean JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1dset_1no_1attrs_1hint
+(JNIEnv *env, jclass clss, jlong dcpl_id)
+{
+    hbool_t  minimize = FALSE;
+    jboolean bval = JNI_FALSE;
+
+    UNUSED(clss);
+
+    if (H5Pget_dset_no_attrs_hint((hid_t)dcpl_id, (hbool_t *)&minimize) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+    if (minimize == TRUE)
+        bval = JNI_TRUE;
+
+done:
+    return bval;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1dset_1no_1attrs_1hint */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_deflate
+ * Signature: (JI)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1deflate
+    (JNIEnv *env, jclass clss, jlong plist, jint level)
+{
+    herr_t retVal = FAIL;
+
+    UNUSED(clss);
+
+    if ((retVal = H5Pset_deflate((hid_t)plist, (unsigned)level)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1deflate */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_fill_value
+ * Signature: (JJ[B)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1fill_1value
+    (JNIEnv *env, jclass clss, jlong plist_id, jlong type_id, jbyteArray value)
+{
+    jboolean  isCopy;
+    jbyte    *byteP = NULL;
+    herr_t    status = FAIL;
+
+    UNUSED(clss);
+
+    if (NULL == value) {
+        if ((status = H5Pset_fill_value((hid_t)plist_id, (hid_t)type_id, byteP)) < 0)
+            H5_LIBRARY_ERROR(ENVONLY);
+    }
+    else {
+        PIN_BYTE_ARRAY(ENVONLY, value, byteP, &isCopy, "H5Pget_fill_value: value array not pinned");
+
+        if ((status = H5Pset_fill_value((hid_t)plist_id, (hid_t)type_id, byteP)) < 0)
+            H5_LIBRARY_ERROR(ENVONLY);
+    }
+
+done:
+    if (byteP)
+        UNPIN_BYTE_ARRAY(ENVONLY, value, byteP, JNI_ABORT);
+
+    return (jint)status;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1fill_1value */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_fill_value
+ * Signature: (JJ[B)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1fill_1value
+    (JNIEnv *env, jclass clss, jlong plist_id, jlong type_id, jbyteArray value)
+{
+    jboolean  isCopy;
+    herr_t    status = FAIL;
+    jbyte    *byteP = NULL;
+
+    UNUSED(clss);
+
+    if (NULL == value)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_fill_value: value is NULL");
+
+    PIN_BYTE_ARRAY(ENVONLY, value, byteP, &isCopy, "H5Pget_fill_value: value array not pinned");
+
+    if ((status = H5Pget_fill_value((hid_t)plist_id, (hid_t)type_id, byteP)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    if (byteP)
+        UNPIN_BYTE_ARRAY(ENVONLY, value, byteP, (status < 0) ? JNI_ABORT : 0);
+
+    return (jint)status;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1fill_1value */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pfill_value_defined
+ * Signature: (J[I)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pfill_1value_1defined
+    (JNIEnv *env, jclass clss, jlong plist, jintArray status)
+{
+    H5D_fill_value_t  value = H5D_FILL_VALUE_ERROR;
+    jboolean          isCopy;
+    jint             *theArray = NULL;
+    herr_t            retVal = FAIL;
+
+    UNUSED(clss);
+
+    if (NULL == status)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pfill_value_defined: status is NULL");
+
+    PIN_INT_ARRAY(ENVONLY, status, theArray, &isCopy, "H5Pfill_value_defined: status not pinned");
+
+    if ((retVal = H5Pfill_value_defined((hid_t)plist, &value)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+    theArray[0] = (jint)value;
+
+done:
+    if (theArray)
+        UNPIN_INT_ARRAY(ENVONLY, status, theArray, (retVal < 0) ? JNI_ABORT : 0);
+
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pfill_1value_1defined */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_fill_time
+ * Signature: (JI)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1fill_1time
+    (JNIEnv *env, jclass clss, jlong plist, jint fill_time)
+{
+    herr_t retVal = FAIL;
+
+    UNUSED(clss);
+
+    if ((retVal = H5Pset_fill_time((hid_t)plist, (H5D_fill_time_t)fill_time)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1fill_1time */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_fill_time
+ * Signature: (J[I)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1fill_1time
+    (JNIEnv *env, jclass clss, jlong plist, jintArray fill_time)
+{
+    H5D_fill_time_t  time = H5D_FILL_TIME_ERROR;
+    jboolean         isCopy;
+    jint            *theArray = NULL;
+    herr_t           retVal = FAIL;
+
+    UNUSED(clss);
+
+    if (NULL == fill_time)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pget_fill_time: fill_time is NULL");
+
+    PIN_INT_ARRAY(ENVONLY, fill_time, theArray, &isCopy, "H5Pget_fill_time: fill_time not pinned");
+
+    if ((retVal = H5Pget_fill_time((hid_t)plist, &time)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+    theArray[0] = (jint)time;
+
+done:
+    if (theArray)
+        UNPIN_INT_ARRAY(ENVONLY, fill_time, theArray, (retVal < 0) ? JNI_ABORT : 0);
+
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1fill_1time */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_alloc_time
+ * Signature: (JI)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1alloc_1time
+    (JNIEnv *env, jclass clss, jlong plist, jint alloc_time)
+{
+    herr_t retVal = FAIL;
+
+    UNUSED(clss);
+
+    if ((retVal = H5Pset_alloc_time((hid_t)plist, (H5D_alloc_time_t)alloc_time)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1alloc_1time */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_alloc_time
+ * Signature: (J[I)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1alloc_1time
+    (JNIEnv *env, jclass clss, jlong plist, jintArray alloc_time)
+{
+    H5D_alloc_time_t  time = H5D_ALLOC_TIME_ERROR;
+    jboolean          isCopy;
+    jint             *theArray = NULL;
+    herr_t            retVal = FAIL;
+
+    UNUSED(clss);
+
+    if (NULL == alloc_time)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pget_alloc_time: alloc_time is NULL");
+
+    PIN_INT_ARRAY(ENVONLY, alloc_time, theArray, &isCopy, "H5Pget_alloc_time: alloc_time not pinned");
+
+    if ((retVal =  H5Pget_alloc_time((hid_t)plist, &time)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+    theArray[0] = time;
+
+done:
+    if (theArray)
+        UNPIN_INT_ARRAY(ENVONLY, alloc_time, theArray, (retVal < 0) ? JNI_ABORT : 0);
+
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1alloc_1time */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_filter
+ * Signature: (JIIJ[I)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1filter
+    (JNIEnv *env, jclass clss, jlong plist, jint filter, jint flags,
+  jlong cd_nelmts, jintArray cd_values)
+{
+    jboolean  isCopy;
+    jint     *theArray = NULL;
+    herr_t    status = FAIL;
+
+    UNUSED(clss);
+
+    if (NULL == cd_values) {
+        if ((status = H5Pset_filter((hid_t)plist, (H5Z_filter_t)filter,
+                (unsigned int)flags, (size_t)cd_nelmts, NULL)) < 0)
+            H5_LIBRARY_ERROR(ENVONLY);
+    }
+    else {
+        PIN_INT_ARRAY(ENVONLY, cd_values, theArray, &isCopy, "H5Pset_filter: input array not pinned");
+
+        if ((status = H5Pset_filter((hid_t)plist, (H5Z_filter_t)filter,
+                (unsigned int)flags, (size_t)cd_nelmts, (const unsigned int *)theArray)) < 0)
+            H5_LIBRARY_ERROR(ENVONLY);
+    }
+
+done:
+    if (theArray)
+        UNPIN_INT_ARRAY(ENVONLY, cd_values, theArray, JNI_ABORT);
+
+    return (jint)status;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1filter */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pall_filters_avail
+ * Signature: (J)Z
+ */
+JNIEXPORT jboolean JNICALL
+Java_hdf_hdf5lib_H5_H5Pall_1filters_1avail
+    (JNIEnv *env, jclass clss, jlong dcpl_id)
+{
+    htri_t bval = JNI_FALSE;
+
+    UNUSED(clss);
+
+    if ((bval = H5Pall_filters_avail((hid_t)dcpl_id)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+    bval = (bval > 0) ? JNI_TRUE : JNI_FALSE;
+
+done:
+    return (jboolean)bval;
+} /* end Java_hdf_hdf5lib_H5_H5Pall_1filters_1avail */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_nfilters
+ * Signature: (J)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1nfilters
+    (JNIEnv *env, jclass clss, jlong plist)
+{
+    int retVal = -1;
+
+    UNUSED(clss);
+
+    if ((retVal = H5Pget_nfilters((hid_t)plist)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1nfilters */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_filter
+ * Signature: (JI[I[J[IJ[Ljava/lang/String;)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1filter
+    (JNIEnv *env, jclass clss, jlong plist, jint filter_number, jintArray flags,
+        jlongArray cd_nelmts, jintArray cd_values, jlong namelen, jobjectArray name)
+{
+    jboolean  isCopy;
+    jstring   str;
+    jint     *flagsArray = NULL;
+    jlong    *cd_nelmtsArray = NULL;
+    jint     *cd_valuesArray = NULL;
+    char     *filter = NULL;
+    herr_t    status = FAIL;
+
+    UNUSED(clss);
+
+    if (namelen <= 0)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter: namelen <= 0");
+    if (NULL == flags)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter: flags is NULL");
+    if (NULL == cd_nelmts)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter: cd_nelmts is NULL");
+    if (NULL == cd_values)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter: cd_values is NULL");
+
+    if (NULL == (filter = (char *) HDmalloc(sizeof(char) * (size_t)namelen)))
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_filter: memory allocation failed");
+
+    PIN_INT_ARRAY(ENVONLY, flags, flagsArray, &isCopy, "H5Pget_filter: flags array not pinned");
+    PIN_LONG_ARRAY(ENVONLY, cd_nelmts, cd_nelmtsArray, &isCopy, "H5Pget_filter: nelmts array not pinned");
+    PIN_INT_ARRAY(ENVONLY, cd_values, cd_valuesArray, &isCopy, "H5Pget_filter: elmts array not pinned");
+
+
+    /* direct cast (size_t *)variable fails on 32-bit environment */
+    {
+        unsigned int filter_config;
+        long long    cd_nelmts_temp = *cd_nelmtsArray;
+        size_t       cd_nelmts_t = (size_t) cd_nelmts_temp;
+
+        if ((status = H5Pget_filter2((hid_t)plist, (unsigned)filter_number,
+                (unsigned int *)flagsArray, &cd_nelmts_t, (unsigned int *)cd_valuesArray,
+                (size_t)namelen, filter, &filter_config)) < 0)
+            H5_LIBRARY_ERROR(ENVONLY);
+
+        filter[namelen - 1] = '\0';
+
+        *cd_nelmtsArray = (jlong)cd_nelmts_t;
+    }
+
+    if (NULL == (str = ENVPTR->NewStringUTF(ENVONLY, filter))) {
+        CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_filter: out of memory - unable to construct string from UTF characters");
+    }
+
+    ENVPTR->SetObjectArrayElement(ENVONLY, name, 0, (jobject)str);
+    CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+done:
+    if (cd_valuesArray)
+        UNPIN_INT_ARRAY(ENVONLY, cd_values, cd_valuesArray, (status < 0) ? JNI_ABORT : 0);
+    if (cd_nelmtsArray)
+        UNPIN_LONG_ARRAY(ENVONLY, cd_nelmts, cd_nelmtsArray, (status < 0) ? JNI_ABORT : 0);
+    if (flagsArray)
+        UNPIN_INT_ARRAY(ENVONLY, flags, flagsArray, (status < 0) ? JNI_ABORT : 0)
+    if (filter)
+        HDfree(filter);
+
+    return (jint)status;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1filter */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_filter2
+ * Signature: (JI[I[J[IJ[Ljava/lang/String;[I)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1filter2
+    (JNIEnv *env, jclass clss, jlong plist, jint filter_number,
+        jintArray flags, jlongArray cd_nelmts, jintArray cd_values, jlong namelen,
+        jobjectArray name, jintArray filter_config)
+{
+    jboolean  isCopy;
+    jstring   str;
+    jint     *flagsArray = NULL;
+    jlong    *cd_nelmtsArray = NULL;
+    jint     *cd_valuesArray = NULL;
+    jint     *filter_configArray = NULL;
+    char     *filter = NULL;
+    herr_t    status = FAIL;
+
+    UNUSED(clss);
+
+    if (namelen <= 0)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter2: namelen <= 0");
+    if (NULL == flags)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter2: flags is NULL");
+    if (NULL == cd_nelmts)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter2: cd_nelmts is NULL");
+    if (NULL == filter_config)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter2: filter_config is NULL");
+
+    if (NULL == (filter = (char *) HDmalloc(sizeof(char) * (size_t)namelen)))
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_filter2: memory allocation failed");
+
+    PIN_INT_ARRAY(ENVONLY, flags, flagsArray, &isCopy, "H5Pget_filter2: flags array not pinned");
+    PIN_LONG_ARRAY(ENVONLY, cd_nelmts, cd_nelmtsArray, &isCopy, "H5Pget_filter2: nelmts array not pinned");
+    PIN_INT_ARRAY(ENVONLY, filter_config, filter_configArray, &isCopy, "H5Pget_filter2: filter_config array not pinned");
+
+    if (NULL == cd_values && *cd_nelmtsArray == 0) {
+        /* direct cast (size_t *)variable fails on 32-bit environment */
+        long long cd_nelmts_temp = 0;
+        size_t cd_nelmts_t = (size_t) cd_nelmts_temp;
+
+        if ((status = H5Pget_filter2((hid_t)plist, (unsigned)filter_number,
+                (unsigned int *)flagsArray, &cd_nelmts_t, NULL,
+                (size_t)namelen, filter, (unsigned int *)filter_configArray)) < 0)
+            H5_LIBRARY_ERROR(ENVONLY);
+
+        filter[namelen - 1] = '\0';
+
+        *cd_nelmtsArray = (jlong)cd_nelmts_t;
+    }
+    else {
+        if (NULL == cd_values)
+            H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter2: cd_values is NULL");
+
+        PIN_INT_ARRAY(ENVONLY, cd_values, cd_valuesArray, &isCopy, "H5Pget_filter2: elmts array not pinned");
+
+        {
+            /* direct cast (size_t *)variable fails on 32-bit environment */
+            long long cd_nelmts_temp = *cd_nelmtsArray;
+            size_t    cd_nelmts_t = (size_t) cd_nelmts_temp;
+
+            if ((status = H5Pget_filter2((hid_t)plist, (unsigned)filter_number,
+                    (unsigned int *)flagsArray, &cd_nelmts_t, (unsigned int *)cd_valuesArray,
+                    (size_t)namelen, filter, (unsigned int *)filter_configArray)) < 0)
+                H5_LIBRARY_ERROR(ENVONLY);
+
+            filter[namelen - 1] = '\0';
+
+            *cd_nelmtsArray = (jlong)cd_nelmts_t;
+        } /* end direct cast special */
+    }
+
+    if (NULL == (str = ENVPTR->NewStringUTF(ENVONLY, filter))) {
+        CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_filter2: out of memory - unable to construct string from UTF characters");
+    }
+
+    ENVPTR->SetObjectArrayElement(ENVONLY, name, 0, (jobject)str);
+    CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+done:
+    if (cd_valuesArray)
+        UNPIN_INT_ARRAY(ENVONLY, cd_values, cd_valuesArray, (status < 0) ? JNI_ABORT : 0);
+    if (filter_configArray)
+        UNPIN_INT_ARRAY(ENVONLY, filter_config, filter_configArray, (status < 0) ? JNI_ABORT : 0);
+    if (cd_nelmtsArray)
+        UNPIN_LONG_ARRAY(ENVONLY, cd_nelmts, cd_nelmtsArray, (status < 0) ? JNI_ABORT : 0);
+    if (flagsArray)
+        UNPIN_INT_ARRAY(ENVONLY, flags, flagsArray, (status < 0) ? JNI_ABORT : 0);
+    if (filter)
+        HDfree(filter);
+
+    return (jint)status;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1filter2 */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_filter_by_id
+ * Signature: (JI[I[J[IJ[Ljava/lang/String;)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1filter_1by_1id
+    (JNIEnv *env, jclass clss, jlong plist, jint filter,
+        jintArray flags, jlongArray cd_nelmts, jintArray cd_values, jlong namelen, jobjectArray name)
+{
+    jboolean  isCopy;
+    jstring   str;
+    jlong    *cd_nelmtsArray = NULL;
+    jint     *cd_valuesArray = NULL;
+    jint     *flagsArray = NULL;
+    char     *aName = NULL;
+    long      bs;
+    int       rank;
+    herr_t    status = FAIL;
+
+    UNUSED(clss);
+
+    bs = (long)namelen;
+
+    if (bs <= 0)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter_by_id: namelen <= 0");
+    if (NULL == flags)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter_by_id: flags is NULL");
+    if (NULL == cd_nelmts)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter_by_id: cd_nelmts is NULL");
+    if (NULL == cd_values)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter_by_id: cd_values is NULL");
+    if (NULL == name)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter_by_id: name is NULL");
+
+    if (NULL == (aName = (char *) HDmalloc(sizeof(char) * (size_t)bs)))
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_filter_by_id: memory allocation failed");
+
+    PIN_INT_ARRAY(ENVONLY, flags, flagsArray, &isCopy, "H5Pget_filter_by_id: flags not pinned");
+    PIN_LONG_ARRAY(ENVONLY, cd_nelmts, cd_nelmtsArray, &isCopy, "H5Pget_filter_by_id: cd_nelms not pinned");
+    PIN_INT_ARRAY(ENVONLY, cd_values, cd_valuesArray, &isCopy, "H5Pget_filter_by_id: cd_values array not pinned");
+
+    if ((rank = ENVPTR->GetArrayLength(ENVONLY, cd_values)) < 0) {
+        CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter_by_id: cd_values array length < 0");
+    }
+
+    {
+        /* direct cast (size_t *)variable fails on 32-bit environment */
+        unsigned int filter_config;
+        long long    cd_nelmts_temp = *cd_nelmtsArray;
+        size_t       cd_nelmts_t = (size_t) cd_nelmts_temp;
+
+        if ((status = H5Pget_filter_by_id2((hid_t)plist, (H5Z_filter_t)filter,
+                (unsigned int *)flagsArray, &cd_nelmts_t, (unsigned int *)cd_valuesArray,
+                (size_t)namelen, (char *)aName, &filter_config)) < 0)
+            H5_LIBRARY_ERROR(ENVONLY);
+
+        aName[bs - 1] = '\0';
+
+        *cd_nelmtsArray = (jlong)cd_nelmts_t;
+    } /* end direct cast special */
+
+    if (NULL == (str = ENVPTR->NewStringUTF(ENVONLY, aName))) {
+        CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_filter_by_id: out of memory - unable to construct string from UTF characters");
+    }
+
+    ENVPTR->SetObjectArrayElement(ENVONLY, name, 0, (jobject)str);
+    CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+done:
+    if (cd_valuesArray)
+        UNPIN_INT_ARRAY(ENVONLY, cd_values, cd_valuesArray, (status < 0) ? JNI_ABORT : 0);
+    if (cd_nelmtsArray)
+        UNPIN_LONG_ARRAY(ENVONLY, cd_nelmts, cd_nelmtsArray, (status < 0) ? JNI_ABORT : 0);
+    if (flagsArray)
+        UNPIN_INT_ARRAY(ENVONLY, flags, flagsArray, (status < 0) ? JNI_ABORT : 0);
+    if (aName)
+        HDfree(aName);
+
+    return (jint)status;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1filter_1by_1id */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_filter_by_id2
+ * Signature: (JI[I[J[IJ[Ljava/lang/String;[I)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1filter_1by_1id2
+    (JNIEnv *env, jclass clss, jlong plist, jint filter,
+        jintArray flags, jlongArray cd_nelmts, jintArray cd_values, jlong namelen, jobjectArray name, jintArray filter_config)
+{
+    jboolean  isCopy;
+    jstring   str;
+    jlong    *cd_nelmtsArray = NULL;
+    jint     *cd_valuesArray = NULL;
+    jint     *flagsArray = NULL;
+    jint     *filter_configArray = NULL;
+    long      bs;
+    char     *aName = NULL;
+    herr_t    status = FAIL;
+
+    UNUSED(clss);
+
+    bs = (long)namelen;
+
+    if (bs <= 0)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter_by_id2: namelen <= 0");
+    if (NULL == flags)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter_by_id2: flags is NULL");
+    if (NULL == cd_nelmts)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter_by_id2: cd_nelmts is NULL");
+    if (NULL == cd_values)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter_by_id2: cd_values is NULL");
+    if (NULL == name)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter_by_id2: name is NULL");
+    if (NULL == filter_config)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pget_filter_by_id2: filter_config is NULL");
+
+    if (NULL == (aName = (char *) HDmalloc(sizeof(char) * (size_t)bs)))
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_filter_by_id2: memory allocation failed");
+
+    PIN_INT_ARRAY(ENVONLY, flags, flagsArray, &isCopy, "H5Pget_filter_by_id2: flags not pinned");
+    PIN_LONG_ARRAY(ENVONLY, cd_nelmts, cd_nelmtsArray, &isCopy, "H5Pget_filter_by_id2: cd_nelms not pinned");
+    PIN_INT_ARRAY(ENVONLY, cd_values, cd_valuesArray, &isCopy, "H5Pget_filter_by_id2: cd_values array not pinned");
+    PIN_INT_ARRAY(ENVONLY, filter_config, filter_configArray, &isCopy, "H5Pget_filter_by_id2: filter_config not pinned");
+
+    {
+        /* direct cast (size_t *)variable fails on 32-bit environment */
+        long long cd_nelmts_temp = *cd_nelmtsArray;
+        size_t    cd_nelmts_t = (size_t) cd_nelmts_temp;
+
+        if ((status = H5Pget_filter_by_id2((hid_t)plist, (H5Z_filter_t)filter,
+                (unsigned int *)flagsArray, &cd_nelmts_t, (unsigned int *)cd_valuesArray,
+                (size_t)namelen, (char *)aName, (unsigned int *)filter_configArray)) < 0)
+            H5_LIBRARY_ERROR(ENVONLY);
+
+        aName[bs - 1] = '\0';
+
+        *cd_nelmtsArray = (jlong)cd_nelmts_t;
+    } /* end direct cast special handling */
+
+    if (NULL == (str = ENVPTR->NewStringUTF(ENVONLY, aName))) {
+        CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_filter_by_id2: out of memory - unable to construct string from UTF characters");
+    }
+
+    ENVPTR->SetObjectArrayElement(ENVONLY, name, 0, (jobject)str);
+    CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+done:
+    if (filter_configArray)
+        UNPIN_INT_ARRAY(ENVONLY, filter_config, filter_configArray, (status < 0) ? JNI_ABORT : 0);
+    if (cd_valuesArray)
+        UNPIN_INT_ARRAY(ENVONLY, cd_values, cd_valuesArray, (status < 0) ? JNI_ABORT : 0);
+    if (cd_nelmtsArray)
+        UNPIN_LONG_ARRAY(ENVONLY, cd_nelmts, cd_nelmtsArray, (status < 0) ? JNI_ABORT : 0);
+    if (flagsArray)
+        UNPIN_INT_ARRAY(ENVONLY, flags, flagsArray, (status < 0) ? JNI_ABORT : 0);
+    if (aName)
+        HDfree(aName);
+
+    return (jint)status;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1filter_1by_1id2 */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pmodify_filter
+ * Signature: (JIIJ[I)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pmodify_1filter
+    (JNIEnv *env, jclass clss, jlong plist, jint filter,
+        jint flags, jlong cd_nelmts, jintArray cd_values)
+{
+    jboolean  isCopy;
+    jint     *cd_valuesP = NULL;
+    herr_t    status = FAIL;
+
+    UNUSED(clss);
+
+    if (NULL == cd_values)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pmodify_filter: cd_values is NULL");
+
+    PIN_INT_ARRAY(ENVONLY, cd_values, cd_valuesP, &isCopy, "H5Pmodify_filter: cd_values not pinned");
+
+    if ((status = H5Pmodify_filter((hid_t)plist, (H5Z_filter_t)filter, (const unsigned int)flags,
+            (size_t)cd_nelmts, (unsigned int *)cd_valuesP)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    if (cd_valuesP)
+        UNPIN_INT_ARRAY(ENVONLY, cd_values, cd_valuesP, JNI_ABORT);
+
+    return (jint)status;
+} /* end Java_hdf_hdf5lib_H5_H5Pmodify_1filter */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Premove_filter
+ * Signature: (JI)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5P1remove_1filter
+    (JNIEnv *env, jclass clss, jlong obj_id, jint filter)
+{
+    herr_t status = FAIL;
+
+    UNUSED(clss);
+
+    if ((status = H5Premove_filter((hid_t)obj_id, (H5Z_filter_t)filter)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jint)status;
+} /* end Java_hdf_hdf5lib_H5_H5P1remove_1filter */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_fletcher32
+ * Signature: (J)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1fletcher32
+    (JNIEnv *env, jclass clss, jlong plist)
+{
+    herr_t retVal = FAIL;
+
+    UNUSED(clss);
+
+    if ((retVal = H5Pset_fletcher32((hid_t)plist)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1fletcher32 */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_nbit
+ * Signature: (J)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1nbit
+    (JNIEnv *env, jclass clss, jlong plist_id)
+{
+    herr_t retVal = FAIL;
+
+    UNUSED(clss);
+
+    if ((retVal = H5Pset_nbit((hid_t)plist_id)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1nbit */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_scaleoffset
+ * Signature: (JII)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1scaleoffset
+    (JNIEnv *env, jclass clss, jlong plist_id, jint scale_type, jint scale_factor)
+{
+    herr_t retVal = FAIL;
+
+    UNUSED(clss);
+
+    if (scale_factor < 0)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pset_scaleoffset: scale factor must be >= 0");
+    if (scale_type != H5Z_SO_FLOAT_DSCALE && scale_type != H5Z_SO_FLOAT_ESCALE && scale_type != H5Z_SO_INT)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pset_scaleoffset: invalid scale type");
+
+    if ((retVal = H5Pset_scaleoffset((hid_t)plist_id, (H5Z_SO_scale_type_t)scale_type, scale_factor)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1scaleoffset */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_shuffle
+ * Signature: (J)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1shuffle
+    (JNIEnv *env, jclass clss, jlong plist)
+{
+    herr_t retVal = FAIL;
+
+    UNUSED(clss);
+
+    if ((retVal = H5Pset_shuffle((hid_t)plist)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1shuffle */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_szip
+ * Signature: (JII)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1szip
+    (JNIEnv *env, jclass clss, jlong plist, jint options_mask, jint pixels_per_block)
+{
+    herr_t retVal = FAIL;
+
+    UNUSED(clss);
+
+    if ((retVal = H5Pset_szip((hid_t)plist, (unsigned int)options_mask, (unsigned int)pixels_per_block)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1szip */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_external
+ * Signature: (JLjava/lang/String;JJ)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1external
+    (JNIEnv *env, jclass clss, jlong plist, jstring name, jlong offset, jlong size)
+{
+    const char *fileName = NULL;
+    herr_t      status = FAIL;
+
+    UNUSED(clss);
+
+    if (NULL == name)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pset_external: file name is NULL");
+
+    PIN_JAVA_STRING(ENVONLY, name, fileName, NULL, "H5Pset_external: file name not pinned");
+
+    if ((status = H5Pset_external((hid_t)plist, fileName, (off_t)offset, (hsize_t)size)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    if (fileName)
+        UNPIN_JAVA_STRING(ENVONLY, name, fileName);
+
+    return (jint)status;
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1external */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_external
+ * Signature: (JIJ[Ljava/lang/String;[J)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1external
+    (JNIEnv *env, jclass clss, jlong plist, jint idx, jlong name_size,
+        jobjectArray name, jlongArray size)
+{
+    jboolean  isCopy;
+    jstring   str;
+    hsize_t   s;
+    off_t     o;
+    jsize     arrLen;
+    jlong    *theArray = NULL;
+    char     *file = NULL;
+    herr_t    status = FAIL;
+
+    UNUSED(clss);
+
+    if (name_size < 0)
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_external: name_size < 0");
+
+    if ((arrLen = ENVPTR->GetArrayLength(ENVONLY, size)) < 0) {
+        CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_external: size array length < 0");
+    }
+    if ((size != NULL) && (arrLen < 2))
+        H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Pget_external: size input array < 2");
+
+    if (name_size > 0)
+        if (NULL == (file = (char *) HDmalloc(sizeof(char) * (size_t)name_size)))
+            H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_external: memory allocation failed");
+
+    if ((status = H5Pget_external((hid_t) plist, (unsigned)idx, (size_t)name_size,
+            file, (off_t *)&o, (hsize_t *)&s)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+    if (NULL != size) {
+        PIN_LONG_ARRAY(ENVONLY, size, theArray, &isCopy, "H5Pget_external: size array not pinned");
+
+        theArray[0] = o;
+        theArray[1] = (jlong)s;
+    }
+
+    if (NULL != file) {
+        file[name_size - 1] = '\0';
+
+        if (NULL == (str = ENVPTR->NewStringUTF(ENVONLY, file))) {
+            CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+            H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_external: out of memory - unable to construct string from UTF characters");
+        }
+
+        ENVPTR->SetObjectArrayElement(ENVONLY, name, 0, (jobject)str);
+        CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+    }
+
+done:
+    if (theArray)
+        UNPIN_LONG_ARRAY(ENVONLY, size, theArray, (status < 0) ? JNI_ABORT : 0);
+    if (file)
+        HDfree(file);
+
+    return (jint)status;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1external */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_external_count
+ * Signature: (J)I
+ */
+JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1external_1count
+    (JNIEnv *env, jclass clss, jlong plist)
+{
+    int retVal = -1;
+
+    UNUSED(clss);
+
+    if ((retVal = H5Pget_external_count((hid_t)plist)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jint)retVal;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1external_1count */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_virtual
+ * Signature: (JJLjava/lang/String;Ljava/lang/String;J)V
+ */
+JNIEXPORT void JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1virtual
+    (JNIEnv *env, jclass clss, jlong dcpl_id, jlong vspace_id,
+        jstring src_file_name, jstring src_dset_name, jlong src_space_id)
+{
+    const char *fstr = NULL;
+    const char *dstr = NULL;
+    herr_t      retVal = FAIL;
+
+    UNUSED(clss);
+
+    if (NULL == src_file_name)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pset_virtual: src_file_name is NULL");
+    if (NULL == src_dset_name)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pset_virtual: src_dset_name is NULL");
+
+    PIN_JAVA_STRING(ENVONLY, src_file_name, fstr, NULL, "H5Pset_virtual: src_file_name not pinned");
+    PIN_JAVA_STRING(ENVONLY, src_dset_name, dstr, NULL, "H5Pset_virtual: src_dset_name not pinned");
+
+    if ((retVal = H5Pset_virtual((hid_t)dcpl_id, (hid_t)vspace_id, fstr, dstr, (hid_t)src_space_id)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    if (dstr)
+        UNPIN_JAVA_STRING(ENVONLY, src_dset_name, dstr);
+    if (fstr)
+        UNPIN_JAVA_STRING(ENVONLY, src_file_name, fstr);
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1virtual */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_virtual_count
+ * Signature: (J)J
+ */
+JNIEXPORT jlong JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1virtual_1count
+    (JNIEnv *env, jclass clss, jlong dcpl_id)
+{
+    size_t s = 0;
+
+    UNUSED(clss);
+
+    if (H5Pget_virtual_count((hid_t)dcpl_id, &s) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jlong)s;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1virtual_1count */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_virtual_dsetname
+ * Signature: (JJ)Ljava/lang/String;
+ */
+JNIEXPORT jstring JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1virtual_1dsetname
+    (JNIEnv *env, jclass clss, jlong dcpl_id, jlong index)
+{
+    ssize_t  buf_size;
+    char    *dname = NULL;
+    jstring  str = NULL;
+
+    UNUSED(clss);
+
+    /* get the length of the filename */
+    if ((buf_size = H5Pget_virtual_dsetname((hid_t)dcpl_id, (size_t)index, NULL, 0)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+    if (NULL == (dname = (char *) HDmalloc(sizeof(char) * (size_t)buf_size + 1)))
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_virtual_dsetname: memory allocation failed");
+
+    if (H5Pget_virtual_dsetname((hid_t)dcpl_id, (size_t)index, dname, (size_t)buf_size + 1) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+    dname[buf_size] = '\0';
+
+    if (NULL == (str = ENVPTR->NewStringUTF(ENVONLY, dname))) {
+        CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_virtual_dsetname: out of memory - unable to construct string from UTF characters");
+    }
+
+done:
+    if (dname)
+        HDfree(dname);
+
+    return (jstring)str;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1virtual_1dsetname */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_virtual_filename
+ * Signature: (JJ)Ljava/lang/String;
+ */
+JNIEXPORT jstring JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1virtual_1filename
+    (JNIEnv *env, jclass clss, jlong dcpl_id, jlong index)
+{
+    ssize_t  buf_size;
+    char    *fname = NULL;
+    jstring  str = NULL;
+
+    UNUSED(clss);
+
+    /* get the length of the filename */
+    if ((buf_size = H5Pget_virtual_filename((hid_t)dcpl_id, (size_t)index, NULL, 0)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+    if (NULL == (fname = (char *) HDmalloc(sizeof(char) * (size_t)buf_size + 1)))
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_virtual_filename: memory allocation failed");
+
+    if (H5Pget_virtual_filename((hid_t)dcpl_id, (size_t)index, fname, (size_t)buf_size + 1) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+    fname[buf_size] = '\0';
+
+    if (NULL == (str = ENVPTR->NewStringUTF(ENVONLY, fname))) {
+        CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_virtual_filename: out of memory - unable to construct string from UTF characters");
+    }
+
+done:
+    if (fname)
+        HDfree(fname);
+
+    return (jstring)str;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1virtual_1filename */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_virtual_srcspace
+ * Signature: (JJ)J
+ */
+JNIEXPORT jlong JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1virtual_1srcspace
+    (JNIEnv *env, jclass clss, jlong dcpl_id, jlong index)
+{
+    hid_t space_id = H5I_INVALID_HID;
+
+    UNUSED(clss);
+
+    if ((space_id = H5Pget_virtual_srcspace((hid_t)dcpl_id, (size_t)index)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jlong)space_id;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1virtual_1srcspace */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_virtual_vspace
+ * Signature: (JJ)J
+ */
+JNIEXPORT jlong JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1virtual_1vspace
+    (JNIEnv *env, jclass clss, jlong dcpl_id, jlong index)
+{
+    hid_t space_id = H5I_INVALID_HID;
+
+    UNUSED(clss);
+
+    if ((space_id = H5Pget_virtual_vspace((hid_t)dcpl_id, (size_t)index)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    return (jlong)space_id;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1virtual_1vspace */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pset_virtual_prefix
+ * Signature: (JLjava/lang/String;)V
+ */
+JNIEXPORT void JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1virtual_1prefix
+    (JNIEnv *env, jclass clss, jlong dapl_id, jstring prefix)
+{
+    const char *virtPrefix = NULL;
+    herr_t      retVal = FAIL;
+
+    UNUSED(clss);
+
+    if (NULL == prefix)
+        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Pset_virtual_prefix: virtual prefix is NULL");
+
+    PIN_JAVA_STRING(ENVONLY, prefix, virtPrefix, NULL, "H5Pset_virtual_prefix: virtual prefix not pinned");
+
+    if ((retVal = H5Pset_virtual_prefix((hid_t)dapl_id, virtPrefix)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+    if (virtPrefix)
+        UNPIN_JAVA_STRING(ENVONLY, prefix, virtPrefix);
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1virtual_1prefix */
+
+/*
+ * Class:     hdf_hdf5lib_H5
+ * Method:    H5Pget_virtual_prefix
+ * Signature: (J)Ljava/lang/String;
+ */
+JNIEXPORT jstring JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1virtual_1prefix
+    (JNIEnv *env, jclass clss, jlong dapl_id)
+{
+    ssize_t  prefix_size = -1;
+    char    *pre = NULL;
+    jstring  str = NULL;
+
+    UNUSED(clss);
+
+    if ((prefix_size = H5Pget_virtual_prefix((hid_t)dapl_id, (char *)NULL, 0)) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+
+    if (NULL == (pre = (char *) HDmalloc(sizeof(char) * (size_t) prefix_size + 1)))
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_virtual_prefix: memory allocation failed");
+
+    if (H5Pget_virtual_prefix((hid_t)dapl_id, (char *)pre, (size_t) prefix_size + 1) < 0)
+        H5_LIBRARY_ERROR(ENVONLY);
+    pre[prefix_size] = '\0';
+
+    if (NULL == (str = ENVPTR->NewStringUTF(ENVONLY, pre))) {
+        CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+        H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_virtual_prefix: out of memory - unable to construct string from UTF characters");
+    }
+
+done:
+    if (pre)
+        HDfree(pre);
+
+    return (jstring)str;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1virtual_1prefix */
+
+#ifdef __cplusplus
+} /* end extern "C" */
+#endif /* __cplusplus */