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authorM. Scot Breitenfeld <brtnfld@hdfgroup.org>2019-04-24 17:57:30 (GMT)
committerM. Scot Breitenfeld <brtnfld@hdfgroup.org>2019-04-24 17:57:30 (GMT)
commit7dd53873f73ee67046607b50067b543f2a44cab3 (patch)
tree4d08558545b8403ed43ff27ebb5bd02b8503a52e /java/src
parent6682f51a1157dc9e88bd34528fff999aee50ca2a (diff)
parent4fbe80acc27bc0e84eec9880c3c4257802e5bae5 (diff)
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Merge branch 'develop' into H10621
Diffstat (limited to 'java/src')
-rw-r--r--java/src/hdf/hdf5lib/H5.java17
-rw-r--r--java/src/hdf/hdf5lib/HDF5Constants.java3
-rw-r--r--java/src/jni/h5Constants.c2
-rw-r--r--java/src/jni/h5fImp.c24
-rw-r--r--java/src/jni/h5fImp.h9
-rw-r--r--java/src/jni/h5sImp.c4
6 files changed, 53 insertions, 6 deletions
diff --git a/java/src/hdf/hdf5lib/H5.java b/java/src/hdf/hdf5lib/H5.java
index 57157c2..e874732 100644
--- a/java/src/hdf/hdf5lib/H5.java
+++ b/java/src/hdf/hdf5lib/H5.java
@@ -212,7 +212,7 @@ import hdf.hdf5lib.structs.H5O_info_t;
* exception handlers to print out the HDF-5 error stack.
* <hr>
*
- * @version HDF5 1.11.4 <BR>
+ * @version HDF5 1.11.5 <BR>
* <b>See also: <a href ="./hdf.hdf5lib.HDFArray.html"> hdf.hdf5lib.HDFArray</a> </b><BR>
* <a href ="./hdf.hdf5lib.HDF5Constants.html"> hdf.hdf5lib.HDF5Constants</a><BR>
* <a href ="./hdf.hdf5lib.HDF5CDataTypes.html"> hdf.hdf5lib.HDF5CDataTypes</a><BR>
@@ -235,7 +235,7 @@ public class H5 implements java.io.Serializable {
*
* Make sure to update the versions number when a different library is used.
*/
- public final static int LIB_VERSION[] = { 1, 11, 4 };
+ public final static int LIB_VERSION[] = { 1, 11, 5 };
public final static String H5PATH_PROPERTY_KEY = "hdf.hdf5lib.H5.hdf5lib";
@@ -2968,6 +2968,19 @@ public class H5 implements java.io.Serializable {
public synchronized static native int H5Fget_intent(long file_id) throws HDF5LibraryException;
/**
+ * H5Fget_fileno retrieves the "file number" for an open file.
+ *
+ * @param file_id
+ * IN: File identifier for a currently-open HDF5 file
+ *
+ * @return the unique file number for the file.
+ *
+ * @exception HDF5LibraryException
+ * - Error from the HDF-5 Library.
+ **/
+ public synchronized static native long H5Fget_fileno(long file_id) throws HDF5LibraryException;
+
+ /**
* H5Fget_mdc_hit_rate queries the metadata cache of the target file to obtain its hit rate (cache hits / (cache
* hits + cache misses)) since the last time hit rate statistics were reset.
*
diff --git a/java/src/hdf/hdf5lib/HDF5Constants.java b/java/src/hdf/hdf5lib/HDF5Constants.java
index a0c2ed6..9294bad 100644
--- a/java/src/hdf/hdf5lib/HDF5Constants.java
+++ b/java/src/hdf/hdf5lib/HDF5Constants.java
@@ -216,6 +216,7 @@ public class HDF5Constants {
public static final int H5F_LIBVER_EARLIEST = H5F_LIBVER_EARLIEST();
public static final int H5F_LIBVER_V18 = H5F_LIBVER_V18();
public static final int H5F_LIBVER_V110 = H5F_LIBVER_V110();
+ public static final int H5F_LIBVER_V112 = H5F_LIBVER_V112();
public static final int H5F_LIBVER_NBOUNDS = H5F_LIBVER_NBOUNDS();
public static final int H5F_LIBVER_LATEST = H5F_LIBVER_LATEST();
public static final int H5F_OBJ_ALL = H5F_OBJ_ALL();
@@ -1049,6 +1050,8 @@ public class HDF5Constants {
private static native final int H5F_LIBVER_V110();
+ private static native final int H5F_LIBVER_V112();
+
private static native final int H5F_LIBVER_NBOUNDS();
private static native final int H5F_LIBVER_LATEST();
diff --git a/java/src/jni/h5Constants.c b/java/src/jni/h5Constants.c
index 2ac0892..74eb436 100644
--- a/java/src/jni/h5Constants.c
+++ b/java/src/jni/h5Constants.c
@@ -401,6 +401,8 @@ Java_hdf_hdf5lib_HDF5Constants_H5F_1LIBVER_1V18(JNIEnv *env, jclass cls){return
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_HDF5Constants_H5F_1LIBVER_1V110(JNIEnv *env, jclass cls){return H5F_LIBVER_V110;}
JNIEXPORT jint JNICALL
+Java_hdf_hdf5lib_HDF5Constants_H5F_1LIBVER_1V112(JNIEnv *env, jclass cls){return H5F_LIBVER_V112;}
+JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_HDF5Constants_H5F_1LIBVER_1NBOUNDS(JNIEnv *env, jclass cls){return H5F_LIBVER_NBOUNDS;}
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_HDF5Constants_H5F_1LIBVER_1LATEST(JNIEnv *env, jclass cls){return H5F_LIBVER_LATEST;}
diff --git a/java/src/jni/h5fImp.c b/java/src/jni/h5fImp.c
index d145c6a..80567d9 100644
--- a/java/src/jni/h5fImp.c
+++ b/java/src/jni/h5fImp.c
@@ -260,11 +260,11 @@ done:
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Fget_1intent
- (JNIEnv *env, jclass cls, jlong file_id)
+ (JNIEnv *env, jclass clss, jlong file_id)
{
unsigned intent = 0;
- UNUSED(cls);
+ UNUSED(clss);
if (H5Fget_intent((hid_t)file_id, &intent) < 0)
H5_LIBRARY_ERROR(ENVONLY);
@@ -275,6 +275,26 @@ done:
/*
* Class: hdf_hdf5lib_H5
+ * Method: H5Fget_fileno
+ * Signature: (J)J
+ */
+JNIEXPORT jlong JNICALL
+Java_hdf_hdf5lib_H5_H5Fget_1fileno
+ (JNIEnv *env, jclass clss, jlong file_id)
+{
+ unsigned long fileno = 0;
+
+ UNUSED(clss);
+
+ if (H5Fget_fileno((hid_t)file_id, &fileno) < 0)
+ H5_LIBRARY_ERROR(ENVONLY);
+
+done:
+ return (jlong)fileno;
+} /* end Java_hdf_hdf5lib_H5_H5Fget_1fileno */
+
+/*
+ * Class: hdf_hdf5lib_H5
* Method: H5Fclose
* Signature: (J)I
*/
diff --git a/java/src/jni/h5fImp.h b/java/src/jni/h5fImp.h
index 410a249..fc02c76 100644
--- a/java/src/jni/h5fImp.h
+++ b/java/src/jni/h5fImp.h
@@ -104,6 +104,15 @@ Java_hdf_hdf5lib_H5_H5Fget_1intent
/*
* Class: hdf_hdf5lib_H5
+ * Method: H5Fget_fileno
+ * Signature: (J)J
+ */
+JNIEXPORT jlong JNICALL
+Java_hdf_hdf5lib_H5_H5Fget_1fileno
+ (JNIEnv*, jclass, jlong);
+
+/*
+ * Class: hdf_hdf5lib_H5
* Method: H5Fclose
* Signature: (J)I
*/
diff --git a/java/src/jni/h5sImp.c b/java/src/jni/h5sImp.c
index a91dab2..d8110a1 100644
--- a/java/src/jni/h5sImp.c
+++ b/java/src/jni/h5sImp.c
@@ -1141,7 +1141,7 @@ Java_hdf_hdf5lib_H5_H5Sencode
if (obj_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Sencode: invalid object ID");
- if ((status = H5Sencode(obj_id, NULL, &buf_size)) < 0)
+ if ((status = H5Sencode2(obj_id, NULL, &buf_size, H5P_DEFAULT)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
if (buf_size == 0)
@@ -1150,7 +1150,7 @@ Java_hdf_hdf5lib_H5_H5Sencode
if (NULL == (bufPtr = (unsigned char *) HDcalloc((size_t) 1, buf_size)))
H5_JNI_FATAL_ERROR(ENVONLY, "H5Sencode: failed to allocate encoding buffer");
- if ((status = H5Sencode((hid_t) obj_id, bufPtr, &buf_size)) < 0)
+ if ((status = H5Sencode2((hid_t) obj_id, bufPtr, &buf_size, H5P_DEFAULT)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
if (NULL == (returnedArray = ENVPTR->NewByteArray(ENVONLY, (jsize) buf_size)))