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author | Larry Knox <lrknox@hdfgroup.org> | 2022-04-05 13:20:19 (GMT) |
---|---|---|
committer | GitHub <noreply@github.com> | 2022-04-05 13:20:19 (GMT) |
commit | bddd148fd29deb18439767c416199914845431b8 (patch) | |
tree | 9afaa591016c2ae1fe1978d4573c80303420d922 /java/src | |
parent | 99ba670f6add3bf83c0361537230e686f3976d1e (diff) | |
download | hdf5-bddd148fd29deb18439767c416199914845431b8.zip hdf5-bddd148fd29deb18439767c416199914845431b8.tar.gz hdf5-bddd148fd29deb18439767c416199914845431b8.tar.bz2 |
Misc fixes from develop nov21 - feb22 (#1580)
* Make default to build high-level tools the same as default for (#1234)
high-level library.
* Updated README.txt to README.md (#1375)
* H5Lexists docs: Removed reference to 1.8.16 since the change is the 1.8.x releases, HDFFV-11289
* H5Oget_info_by_name, name can be any object, not just a group
* Converted README.txt to README.md and updated files referring to README.txt to README.md.
* removed references to README.txt
* updated MANIFEST
* Snprintf2 (#1399)
* Replaced many uses of sprintf with safer snprintf
Many very straightforward, but in a few cases added a length parameter to some private functions, because buffer length was otherwise unknowable.
* Removed unnecessary use of static on small buffers
This improves thread safety.
* Committing clang-format changes
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Replaced several uses of sprintf with safer snprintf (#1383)
* Replaced several uses of sprintf with safer snprintf
* Committing clang-format changes
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Used clang-tidy to change all floating point f suffixes to F (#1359)
* Added another missing override keyword on a dtor (#1384)
* Creating FUNDING.yml (#1427)
* Creating FUNDING.yml
Will add sponsor this project widget to the repo's page.
* Correct file name
Add sponsor widget; filename typo fixed.
* Update MANIFEST
* Fixed AbstractDs::getVarLenType documentation (#1441)
* Committing clang-format changes
* Open bsd fixes (#1195)
* Fix end of line alignment.
Co-authored-by: Scot Breitenfeld <brtnfld@hdfgroup.org>
Co-authored-by: Sean McBride <sean@rogue-research.com>
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: loricooperhdf <lori.cooper@hdfgroup.org>
Co-authored-by: myd7349 <myd7349@gmail.com>
Diffstat (limited to 'java/src')
-rw-r--r-- | java/src/jni/h5util.c | 151 |
1 files changed, 83 insertions, 68 deletions
diff --git a/java/src/jni/h5util.c b/java/src/jni/h5util.c index 02e99af..5a01dc9 100644 --- a/java/src/jni/h5util.c +++ b/java/src/jni/h5util.c @@ -182,7 +182,7 @@ size_t h5str_convert(JNIEnv *env, char **in_str, hid_t container, hid_t tid, void *out_buf, size_t out_buf_offset) { unsigned char *ucptr = NULL; - static char fmt_llong[8], fmt_ullong[8]; + char fmt_llong[8], fmt_ullong[8]; H5T_class_t tclass = H5T_NO_CLASS; const char delimiter[] = " ," H5_COMPOUND_BEGIN_INDICATOR H5_COMPOUND_END_INDICATOR H5_ARRAY_BEGIN_INDICATOR H5_ARRAY_END_INDICATOR H5_VLEN_BEGIN_INDICATOR H5_VLEN_END_INDICATOR; @@ -211,10 +211,10 @@ h5str_convert(JNIEnv *env, char **in_str, hid_t container, hid_t tid, void *out_ /* Build default formats for long long types */ if (!fmt_llong[0]) { - if (HDsprintf(fmt_llong, "%%%sd", H5_PRINTF_LL_WIDTH) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_convert: HDsprintf failure"); - if (HDsprintf(fmt_ullong, "%%%su", H5_PRINTF_LL_WIDTH) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_convert: HDsprintf failure"); + if (HDsnprintf(fmt_llong, sizeof(fmt_llong), "%%%sd", H5_PRINTF_LL_WIDTH) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_convert: HDsnprintf failure"); + if (HDsnprintf(fmt_ullong, sizeof(fmt_ullong), "%%%su", H5_PRINTF_LL_WIDTH) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_convert: HDsnprintf failure"); } /* end if */ switch (tclass) { @@ -759,7 +759,7 @@ size_t h5str_sprintf(JNIEnv *env, h5str_t *out_str, hid_t container, hid_t tid, void *in_buf, int expand_data) { unsigned char *ucptr = (unsigned char *)in_buf; - static char fmt_llong[8], fmt_ullong[8]; + char fmt_llong[8], fmt_ullong[8]; H5T_class_t tclass = H5T_NO_CLASS; size_t typeSize = 0; H5T_sign_t nsign = H5T_SGN_ERROR; @@ -794,11 +794,12 @@ h5str_sprintf(JNIEnv *env, h5str_t *out_str, hid_t container, hid_t tid, void *i HDmemcpy(&tmp_float, cptr, sizeof(float)); - if (NULL == (this_str = (char *)HDmalloc(25))) + size_t this_len = 25; + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, "%g", tmp_float) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%g", tmp_float) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); break; } @@ -808,11 +809,12 @@ h5str_sprintf(JNIEnv *env, h5str_t *out_str, hid_t container, hid_t tid, void *i HDmemcpy(&tmp_double, cptr, sizeof(double)); - if (NULL == (this_str = (char *)HDmalloc(25))) + size_t this_len = 25; + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, "%g", tmp_double) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, "%g", this_len, tmp_double) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); break; } @@ -822,11 +824,12 @@ h5str_sprintf(JNIEnv *env, h5str_t *out_str, hid_t container, hid_t tid, void *i HDmemcpy(&tmp_ldouble, cptr, sizeof(long double)); - if (NULL == (this_str = (char *)HDmalloc(27))) + size_t this_len = 27; + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, "%Lg", tmp_ldouble) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%Lg", tmp_ldouble) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); break; } @@ -888,25 +891,26 @@ h5str_sprintf(JNIEnv *env, h5str_t *out_str, hid_t container, hid_t tid, void *i unsigned char tmp_uchar = 0; char tmp_char = 0; + size_t this_len = 7; if (H5T_SGN_NONE == nsign) { HDmemcpy(&tmp_uchar, cptr, sizeof(unsigned char)); - if (NULL == (this_str = (char *)HDmalloc(7))) + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, "%hhu", tmp_uchar) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%hhu", tmp_uchar) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); } else { HDmemcpy(&tmp_char, cptr, sizeof(char)); - if (NULL == (this_str = (char *)HDmalloc(7))) + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, "%hhd", tmp_char) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%hhd", tmp_char) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); } break; @@ -916,25 +920,26 @@ h5str_sprintf(JNIEnv *env, h5str_t *out_str, hid_t container, hid_t tid, void *i unsigned short tmp_ushort = 0; short tmp_short = 0; + size_t this_len = 9; if (H5T_SGN_NONE == nsign) { HDmemcpy(&tmp_ushort, cptr, sizeof(unsigned short)); - if (NULL == (this_str = (char *)HDmalloc(9))) + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, "%hu", tmp_ushort) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%hu", tmp_ushort) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); } else { HDmemcpy(&tmp_short, cptr, sizeof(short)); - if (NULL == (this_str = (char *)HDmalloc(9))) + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, "%hd", tmp_short) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%hd", tmp_short) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); } break; @@ -944,25 +949,26 @@ h5str_sprintf(JNIEnv *env, h5str_t *out_str, hid_t container, hid_t tid, void *i unsigned int tmp_uint = 0; int tmp_int = 0; + size_t this_len = 14; if (H5T_SGN_NONE == nsign) { HDmemcpy(&tmp_uint, cptr, sizeof(unsigned int)); - if (NULL == (this_str = (char *)HDmalloc(14))) + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, "%u", tmp_uint) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%u", tmp_uint) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); } else { HDmemcpy(&tmp_int, cptr, sizeof(int)); - if (NULL == (this_str = (char *)HDmalloc(14))) + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, "%d", tmp_int) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%d", tmp_int) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); } break; @@ -972,25 +978,26 @@ h5str_sprintf(JNIEnv *env, h5str_t *out_str, hid_t container, hid_t tid, void *i unsigned long tmp_ulong = 0; long tmp_long = 0; + size_t this_len = 23; if (H5T_SGN_NONE == nsign) { HDmemcpy(&tmp_ulong, cptr, sizeof(unsigned long)); - if (NULL == (this_str = (char *)HDmalloc(23))) + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, "%lu", tmp_ulong) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%lu", tmp_ulong) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); } else { HDmemcpy(&tmp_long, cptr, sizeof(long)); - if (NULL == (this_str = (char *)HDmalloc(23))) + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, "%ld", tmp_long) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%ld", tmp_long) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); } break; @@ -1001,25 +1008,26 @@ h5str_sprintf(JNIEnv *env, h5str_t *out_str, hid_t container, hid_t tid, void *i unsigned long long tmp_ullong = 0; long long tmp_llong = 0; + size_t this_len = 25; if (H5T_SGN_NONE == nsign) { HDmemcpy(&tmp_ullong, cptr, sizeof(unsigned long long)); - if (NULL == (this_str = (char *)HDmalloc(25))) + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, fmt_ullong, tmp_ullong) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, fmt_ullong, tmp_ullong) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); } else { HDmemcpy(&tmp_llong, cptr, sizeof(long long)); - if (NULL == (this_str = (char *)HDmalloc(25))) + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, fmt_llong, tmp_llong) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, fmt_llong, tmp_llong) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); } break; @@ -1079,17 +1087,18 @@ h5str_sprintf(JNIEnv *env, h5str_t *out_str, hid_t container, hid_t tid, void *i else { size_t i; - if (NULL == (this_str = (char *)HDmalloc(4 * (typeSize + 1)))) + size_t this_len = 4 * (typeSize + 1); + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); if (1 == typeSize) { - if (HDsprintf(this_str, "%#02x", ucptr[0]) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%#02x", ucptr[0]) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); } else { for (i = 0; i < typeSize; i++) - if (HDsprintf(this_str, "%s%02x", i ? ":" : "", ucptr[i]) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%s%02x", i ? ":" : "", ucptr[i]) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); } } @@ -1134,11 +1143,12 @@ h5str_sprintf(JNIEnv *env, h5str_t *out_str, hid_t container, hid_t tid, void *i else H5_LIBRARY_ERROR(ENVONLY); - if (NULL == (this_str = (char *)HDmalloc(14))) + size_t this_len = 14; + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR( ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, "%u-", (unsigned)oi.type) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%u-", (unsigned)oi.type) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); if (!h5str_append(out_str, this_str)) H5_ASSERTION_ERROR(ENVONLY, "Unable to append string."); HDfree(this_str); @@ -1150,11 +1160,13 @@ h5str_sprintf(JNIEnv *env, h5str_t *out_str, hid_t container, hid_t tid, void *i H5Otoken_to_str(tid, &oi.token, &token_str); - if (NULL == (this_str = (char *)HDmalloc(64 + strlen(token_str) + 1))) + size_t this_len = 64 + strlen(token_str) + 1; + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR( ENVONLY, "h5str_sprintf: failed to allocate string buffer"); - if (HDsprintf(this_str, "%lu:%s", oi.fileno, token_str) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%lu:%s", oi.fileno, token_str) < + 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); H5free_memory(token_str); } @@ -1307,17 +1319,18 @@ h5str_sprintf(JNIEnv *env, h5str_t *out_str, hid_t container, hid_t tid, void *i /* All other types get printed as hexadecimal */ - if (NULL == (this_str = (char *)HDmalloc(4 * (typeSize + 1)))) + size_t this_len = 4 * (typeSize + 1); + if (NULL == (this_str = (char *)HDmalloc(this_len))) H5_OUT_OF_MEMORY_ERROR(ENVONLY, "h5str_sprintf: failed to allocate string buffer"); if (1 == typeSize) { - if (HDsprintf(this_str, "%#02x", ucptr[0]) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%#02x", ucptr[0]) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); } else { for (i = 0; i < typeSize; i++) - if (HDsprintf(this_str, "%s%02x", i ? ":" : "", ucptr[i]) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsprintf failure"); + if (HDsnprintf(this_str, this_len, "%s%02x", i ? ":" : "", ucptr[i]) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_sprintf: HDsnprintf failure"); } break; @@ -1519,8 +1532,9 @@ h5str_dump_region_blocks(JNIEnv *env, h5str_t *str, hid_t region_space, hid_t re for (j = 0; j < ndims; j++) { tmp_str[0] = '\0'; - if (HDsprintf(tmp_str, "%s%lu", j ? "," : "(", (unsigned long)ptdata[i * 2 * ndims + j]) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_dump_region_blocks: HDsprintf failure"); + if (HDsnprintf(tmp_str, sizeof(tmp_str), "%s%lu", j ? "," : "(", + (unsigned long)ptdata[i * 2 * ndims + j]) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_dump_region_blocks: HDsnprintf failure"); if (!h5str_append(str, tmp_str)) H5_ASSERTION_ERROR(ENVONLY, "Unable to append string."); @@ -1529,9 +1543,9 @@ h5str_dump_region_blocks(JNIEnv *env, h5str_t *str, hid_t region_space, hid_t re for (j = 0; j < ndims; j++) { tmp_str[0] = '\0'; - if (HDsprintf(tmp_str, "%s%lu", j ? "," : ")-(", - (unsigned long)ptdata[i * 2 * ndims + j + ndims]) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_dump_region_blocks: HDsprintf failure"); + if (HDsnprintf(tmp_str, sizeof(tmp_str), "%s%lu", j ? "," : ")-(", + (unsigned long)ptdata[i * 2 * ndims + j + ndims]) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_dump_region_blocks: HDsnprintf failure"); if (!h5str_append(str, tmp_str)) H5_ASSERTION_ERROR(ENVONLY, "Unable to append string."); @@ -1696,8 +1710,9 @@ h5str_dump_region_points(JNIEnv *env, h5str_t *str, hid_t region_space, hid_t re for (j = 0; j < ndims; j++) { tmp_str[0] = '\0'; - if (HDsprintf(tmp_str, "%s%lu", j ? "," : "(", (unsigned long)(ptdata[i * ndims + j])) < 0) - H5_JNI_FATAL_ERROR(ENVONLY, "h5str_dump_region_points: HDsprintf failure"); + if (HDsnprintf(tmp_str, sizeof(tmp_str), "%s%lu", j ? "," : "(", + (unsigned long)(ptdata[i * ndims + j])) < 0) + H5_JNI_FATAL_ERROR(ENVONLY, "h5str_dump_region_points: HDsnprintf failure"); if (!h5str_append(str, tmp_str)) H5_ASSERTION_ERROR(ENVONLY, "Unable to append string."); |