Merge UG from 1.10 and add prelim vol section (#1980)

* Merge UG from 1.10 and add prelim vol section

* Spelling fixes

* Merge format and autotools javadoc from 1.10

55 files changed, 2644 insertions, 1372 deletions

diff --git a/java/src/Makefile.am b/java/src/Makefile.am
index 0fe5302..8d9182d 100644
--- a/java/src/Makefile.am
+++ b/java/src/Makefile.am
@@ -108,7 +108,6 @@ hdf5_java_JAVA =  \
 	${pkgpath}/structs/H5AC_cache_config_t.java \
 	${pkgpath}/H5.java  \
 	${pkgpath}/HDF5Constants.java  \
-	${pkgpath}/HDF5GroupInfo.java  \
 	${pkgpath}/HDFArray.java  \
 	${pkgpath}/HDFNativeData.java
 
@@ -124,7 +123,7 @@ DOCTITLE = '<h1>HDF5 Java Wrapper</h1>'
 SRCDIR = '$(pkgpath)'
 
 docs:
-	$(JAVADOC) -sourcepath $(srcdir) -d javadoc -use -splitIndex -windowtitle $(WINDOWTITLE) -doctitle $(DOCTITLE) -J-Xmx180m -verbose -overview $(top_srcdir)/java/src/hdf/overview.html -classpath $(CLASSPATH_ENV) hdf.hdf5lib
+	$(JAVADOC) -sourcepath $(srcdir) -d javadoc -Xdoclint:none -use -splitIndex -windowtitle $(WINDOWTITLE) -doctitle $(DOCTITLE) -J-Xmx180m -verbose -overview $(top_srcdir)/java/src/hdf/overview.html -classpath $(CLASSPATH_ENV) hdf.hdf5lib
 
 CLEANFILES = classhdf5_java.stamp $(jarfile) $(JAVAROOT)/$(pkgpath)/callbacks/*.class $(JAVAROOT)/$(pkgpath)/exceptions/*.class $(JAVAROOT)/$(pkgpath)/structs/*.class $(JAVAROOT)/$(pkgpath)/*.class
 
diff --git a/java/src/hdf/hdf5lib/CMakeLists.txt b/java/src/hdf/hdf5lib/CMakeLists.txt
index eddc934..9247197 100644
--- a/java/src/hdf/hdf5lib/CMakeLists.txt
+++ b/java/src/hdf/hdf5lib/CMakeLists.txt
@@ -101,7 +101,6 @@ set (HDF5_JAVADOC_HDF_HDF5_STRUCTS_SOURCES
 set (HDF5_JAVA_HDF_HDF5_SOURCES
     HDFArray.java
     HDF5Constants.java
-    HDF5GroupInfo.java
     HDFNativeData.java
     H5.java
 )
diff --git a/java/src/hdf/hdf5lib/H5.java b/java/src/hdf/hdf5lib/H5.java
index 48662ef..80bb0f5 100644
--- a/java/src/hdf/hdf5lib/H5.java
+++ b/java/src/hdf/hdf5lib/H5.java
@@ -59,55 +59,55 @@ import hdf.hdf5lib.structs.H5O_native_info_t;
 import hdf.hdf5lib.structs.H5O_token_t;
 
 /**
+ * @page HDF5LIB HDF5 Java API Package
  * This class is the Java interface for the HDF5 library.
  * <p>
  * This code is the called by Java programs to access the entry points of the HDF5 library. Each routine wraps
  * a single HDF5 entry point, generally with the arguments and return codes analogous to the C interface.
  * <p>
- * For details of the HDF5 library, see the HDF5 Documentation at:
- * <a href="http://hdfgroup.org/HDF5/">http://hdfgroup.org/HDF5/</a>
+ * For details of the HDF5 library, @see @ref RM
  * <hr>
  * <p>
  * <b>Mapping of arguments for Java</b>
  *
  * <p>
  * In general, arguments to the HDF Java API are straightforward translations from the 'C' API described in
- * the HDF Reference Manual.
+ * the @ref RM.
  *
  * <table border=1>
- * <caption><b>HDF-5 C types to Java types</b> </caption>
+ * <caption><b>HDF5 C types to Java types</b> </caption>
  * <tr>
- * <td><b>HDF-5</b></td>
+ * <td><b>HDF5</b></td>
  * <td><b>Java</b></td>
  * </tr>
  * <tr>
- * <td>H5T_NATIVE_INT</td>
+ * <td>@ref H5T_NATIVE_INT</td>
  * <td>int, Integer</td>
  * </tr>
  * <tr>
- * <td>H5T_NATIVE_SHORT</td>
+ * <td>@ref H5T_NATIVE_SHORT</td>
  * <td>short, Short</td>
  * </tr>
  * <tr>
- * <td>H5T_NATIVE_FLOAT</td>
+ * <td>@ref H5T_NATIVE_FLOAT</td>
  * <td>float, Float</td>
  * </tr>
  * <tr>
- * <td>H5T_NATIVE_DOUBLE</td>
+ * <td>@ref H5T_NATIVE_DOUBLE</td>
  * <td>double, Double</td>
  * </tr>
  * <tr>
- * <td>H5T_NATIVE_CHAR</td>
+ * <td>@ref H5T_NATIVE_CHAR</td>
  * <td>byte, Byte</td>
  * </tr>
  * <tr>
- * <td>H5T_C_S1</td>
+ * <td>@ref H5T_C_S1</td>
  * <td>java.lang.String</td>
  * </tr>
  * <tr>
- * <td>void * <BR>
+ * <td>void * <br />
  * (i.e., pointer to `Any')</td>
- * <td>Special -- see HDFArray</td>
+ * <td>Special -- see @ref HDFARRAY</td>
  * </tr>
  * </table>
  * <b>General Rules for Passing Arguments and Results</b>
@@ -116,17 +116,17 @@ import hdf.hdf5lib.structs.H5O_token_t;
  * for arrays, which are discussed below.
  * <p>
  * The <i>return value</i> of Java methods is also the analogous type, as above. A major exception to that
- * rule is that all HDF functions that return SUCCEED/FAIL are declared <i>boolean</i> in the Java version,
- * rather than <i>int</i> as in the C. Functions that return a value or else FAIL are declared the
+ * rule is that all HDF Java functions will raise an exception upon failure in the Java version,
+ * rather than just return <i>int</i> as in the C. Functions that return a value are declared
  * equivalent to the C function.
  * However, in most cases the Java method will raise an exception instead of returning an error code.
- * See <a href="#ERRORS">Errors and Exceptions</a> below.
+ * @see @ref ERRORS.
  * <p>
  * Java does not support pass by reference of arguments, so arguments that are returned through <b>OUT</b>
  * parameters must be wrapped in an object or array. The Java API for HDF consistently wraps arguments in
- * arrays.
+ * arrays. Where possible the Java function may return the OUT parameter as an object or basic type.
  * <p>
- * For instance, a function that returns two integers is declared:
+ * For instance, a function that returns two integers declared as:
  *
  * <pre>
  *       h_err_t HDF5dummy( int *a1, int *a2)
@@ -137,26 +137,34 @@ import hdf.hdf5lib.structs.H5O_token_t;
  * <pre>
  * public synchronized static native int HDF5dummy(int args[]);
  * </pre>
+ * OR
+ * <pre>
+ * public synchronized static native int[] HDF5dummy();
+ * </pre>
  *
  * where <i>a1</i> is <i>args[0]</i> and <i>a2</i> is <i>args[1]</i>, and would be invoked:
  *
  * <pre>
  * H5.HDF5dummy(a);
  * </pre>
+ * OR
+ * <pre>
+ * a = H5.HDF5dummy();
+ * </pre>
  *
  * <p>
  * All the routines where this convention is used will have specific documentation of the details, given
  * below.
  * <p>
- * <b>Arrays</b>
+ * <b>@ref HDFARRAY</b>
  * <p>
  * HDF5 needs to read and write multi-dimensional arrays of any number type (and records). The HDF5 API
  * describes the layout of the source and destination, and the data for the array passed as a block of
  * bytes, for instance,
  *
- * <pre>
- *      herr_t H5Dread(long fid, long filetype, long memtype, long memspace, void * data);
- * </pre>
+ * @code
+ *      herr_t H5Dread(long fid, long filetype, long memtype, long memspace, void *data);
+ * @endcode
  *
  * <p>
  * where ``void *'' means that the data may be any valid numeric type, and is a contiguous block of bytes that
@@ -166,7 +174,7 @@ import hdf.hdf5lib.structs.H5O_token_t;
  * For Java, this ``ANY'' is a problem, as the type of data must always be declared. Furthermore,
  * multidimensional arrays are definitely <i>not</i> laid out contiguously in memory. It would be infeasible
  * to declare a separate routine for every combination of number type and dimensionality. For that reason, the
- * <a href="./hdf.hdf5lib.HDFArray.html"><b>HDFArray</b></a> class is used to discover the type, shape, and
+ * @ref HDFARRAY <b>HDFArray</b> class is used to discover the type, shape, and
  * size of the data array at run time, and to convert to and from a contiguous array of bytes in synchronized
  * static native C order.
  * <p>
@@ -174,88 +182,103 @@ import hdf.hdf5lib.structs.H5O_token_t;
  * passed as an ``Object'', and the Java API will translate to and from the appropriate packed array of bytes
  * needed by the C library. So the function above would be declared:
  *
- * <pre>
- * public synchronized static native int H5Dread(long fid, long filetype, long memtype, long memspace,
- * Object data);
- * </pre>
- *            OPEN_IDS.addElement(id);
-
+ * @code
+ *     public synchronized static int H5Dread(long dataset_id, long mem_type_id, long mem_space_id,
+ *                                            long file_space_id, long xfer_plist_id, Object obj,
+ *                                            boolean isCriticalPinning)
+ *       throws HDF5Exception, HDF5LibraryException, NullPointerException;
+ * @endcode
+ *
  * and the parameter <i>data</i> can be any multi-dimensional array of numbers, such as float[][], or
  * int[][][], or Double[][].
  * <p>
- * <b>HDF-5 Constants</b>
+ * <b>@ref HDF5CONST</b>
  * <p>
- * The HDF-5 API defines a set of constants and enumerated values. Most of these values are available to Java
- * programs via the class <a href="./hdf.hdf5lib.HDF5Constants.html"> <b>HDF5Constants</b></a>. For example,
+ * The HDF5 API defines a set of constants and enumerated values. Most of these values are available to Java
+ * programs via the class @ref HDF5CONST <b>HDF5Constants</b></a>. For example,
  * the parameters for the h5open() call include two numeric values, <b><i>HDFConstants.H5F_ACC_RDWR</i></b>
  * and <b><i>HDF5Constants.H5P_DEFAULT</i></b>.
  * As would be expected, these numbers correspond to the C constants
- * <b><i>H5F_ACC_RDWR</i></b> and <b><i>H5P_DEFAULT</i></b>.
+ * <b><i>#H5F_ACC_RDWR</i></b> and <b><i>#H5P_DEFAULT</i></b>.
  * <p>
- * The HDF-5 API defines a set of values that describe number types and sizes, such as "H5T_NATIVE_INT" and
- * "hsize_t". These values are determined at run time by the HDF-5 C library. To support these parameters,
- * the Java class <a href="./hdf.hdf5lib.HDF5CDataTypes.html"> <b>HDF5CDataTypes</b></a> looks up the values
+ * The HDF5 API defines a set of values that describe number types and sizes, such as "H5T_NATIVE_INT" and
+ * "hsize_t". These values are determined at run time by the HDF5 C library. To support these parameters,
+ * the Java HDFConstants class looks up the values
  * when initiated. The values can be accessed as public variables of the Java class, such as:
  *
- * <pre>
- * long data_type = HDF5CDataTypes.JH5T_NATIVE_INT;
- * </pre>
+ * @code
+ * long data_type = HDFConstants.H5T_NATIVE_INT;
+ * @endcode
  *
  * The Java application uses both types of constants the same way, the only difference is that the
- * <b><i>HDF5CDataTypes</i></b> may have different values on different platforms.
+ * <b><i>HDFConstants</i></b> may have different values on different platforms.
  * <p>
- * <b>Error handling and Exceptions</b>
+ * <b>@ref ERRORS</b>
  * <p>
- * The HDF5 error API (H5E) manages the behavior of the error stack in the HDF-5 library. This API is omitted
- * from the JHI5. Errors are converted into Java exceptions. This is totally different from the C interface,
- * but is very natural for Java programming.
- * <p>
- * The exceptions of the JHI5 are organized as sub-classes of the class
- * <a href="./hdf.hdf5lib.exceptions.HDF5Exception.html"> <b>HDF5Exception</b></a>. There are two subclasses
- * of
- * <b>HDF5Exception</b>, <a href="./hdf.hdf5lib.exceptions.HDF5LibraryException.html">
- <b>HDF5LibraryException</b></a>
- * and <a href="./hdf.hdf5lib.exceptions.HDF5JavaException.html"> <b>HDF5JavaException</b></a>. The
- * sub-classes of the former represent errors from the HDF-5 C library, while sub-classes of the latter
+ * The HDF5 error API (@ref H5E) manages the behavior of the error stack in the HDF5 library. This API is
+ * omitted from the JHI5. Errors are converted into Java exceptions. This is totally different from the C
+ * interface, but is very natural for Java programming. <p> The exceptions of the JHI5 are organized as
+ * sub-classes of the class
+ * @ref ERRORS <b>HDF5Exception</b>. There are two subclasses of
+ * <b>HDF5Exception</b>, @ref ERRORSLIB <b>HDF5LibraryException</b>
+ * and @ref ERRORSJAVA <b>HDF5JavaException</b>. The
+ * sub-classes of the former represent errors from the HDF5 C library, while sub-classes of the latter
  * represent errors in the JHI5 wrapper and support code.
  * <p>
  * The super-class <b><i>HDF5LibraryException</i></b> implements the method '<b><i>printStackTrace()</i></b>',
- * which prints out the HDF-5 error stack, as described in the HDF-5 C API <i><b>H5Eprint()</b>.</i> This may
- * be used by Java exception handlers to print out the HDF-5 error stack.
- * <hr>
+ * which prints out the HDF5 error stack, as described in the HDF5 C API <i><b>@ref H5Eprint()</b>.</i> This
+ * may be used by Java exception handlers to print out the HDF5 error stack. <hr>
+ *
+ * @version HDF5 1.10.10 <br />
+ *          <b>See also: </b>
+ *          @ref HDFARRAY hdf.hdf5lib.HDFArray<br />
+ *          @ref HDF5CONST hdf.hdf5lib.HDF5Constants<br />
+ *          @ref ERRORS hdf.hdf5lib.HDF5Exception<br />
+ *          <a href="https://hdfgroup.org/HDF5/">HDF5</a>
+ *
+ * For details of the HDF5 library, @see @ref RM
+ */
+
+/**
+ * This class is the Java interface for the HDF5 library.
  *
- * @version HDF5 1.12.3 <BR>
- *          <b>See also: <a href ="./hdf.hdf5lib.HDFArray.html"> hdf.hdf5lib.HDFArray</a> </b><BR>
- *          <a href ="./hdf.hdf5lib.HDF5Constants.html"> hdf.hdf5lib.HDF5Constants</a><BR>
- *          <a href ="./hdf.hdf5lib.HDF5CDataTypes.html"> hdf.hdf5lib.HDF5CDataTypes</a><BR>
- *          <a href ="./hdf.hdf5lib.HDF5Exception.html"> hdf.hdf5lib.HDF5Exception</a><BR>
- *          <a href="http://hdfgroup.org/HDF5/"> http://hdfgroup.org/HDF5"</a>
+ * @defgroup JH5 HDF5 Library Java Interface
+ *
+ * This code is the called by Java programs to access the entry points of the HDF5 library. Each routine wraps
+ * a single HDF5 entry point, generally with the arguments and return codes analogous to the C interface.
  *
  */
 public class H5 implements java.io.Serializable {
     /**
-     *
+     * Serialization ID
      */
     private static final long serialVersionUID = 6129888282117053288L;
 
     private final static org.slf4j.Logger log = org.slf4j.LoggerFactory.getLogger(H5.class);
 
     /**
-     * The version number of the HDF5 library:
-     * LIB_VERSION[0]: The major version of the library.
-     * LIB_VERSION[1]: The minor version of the library.
-     * LIB_VERSION[2]: The release number of the library.
+     * @ingroup JH5
      *
+     * The version number of the HDF5 library:
+     * <ul>
+     * <li>LIB_VERSION[0]: The major version of the library.</li>
+     * <li>LIB_VERSION[1]: The minor version of the library.</li>
+     * <li>LIB_VERSION[2]: The release number of the library.</li>
+     * </ul>
      * Make sure to update the versions number when a different library is used.
      */
     public final static int LIB_VERSION[] = {1, 12, 3};
 
     /**
+     * @ingroup JH5
+     *
      *  add system property to load library by path
      */
     public final static String H5PATH_PROPERTY_KEY = "hdf.hdf5lib.H5.hdf5lib";
 
     /**
+     * @ingroup JH5
+     *
      *  add system property to load library by name from library path, via System.loadLibrary()
      */
     public final static String H5_LIBRARY_NAME_PROPERTY_KEY = "hdf.hdf5lib.H5.loadLibraryName";
@@ -268,6 +291,8 @@ public class H5 implements java.io.Serializable {
     static { loadH5Lib(); }
 
     /**
+     * @ingroup JH5
+     *
      *  load native library
      */
     public static void loadH5Lib()
@@ -372,6 +397,8 @@ public class H5 implements java.io.Serializable {
     // ////////////////////////////////////////////////////////////
 
     /**
+     * @ingroup JH5
+     *
      * Get number of open IDs.
      *
      * @return Returns a count of open IDs
@@ -379,6 +406,8 @@ public class H5 implements java.io.Serializable {
     public final static int getOpenIDCount() { return OPEN_IDS.size(); }
 
     /**
+     * @ingroup JH5
+     *
      * Get the open IDs
      *
      * @return Returns a collection of open IDs
@@ -386,6 +415,8 @@ public class H5 implements java.io.Serializable {
     public final static Collection<Long> getOpenIDs() { return OPEN_IDS; }
 
     /**
+     * @ingroup JH5
+     *
      * H5check_version verifies that the arguments match the version numbers compiled into the library.
      *
      * @param majnum
@@ -397,47 +428,55 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful. Upon failure (when the versions do not match), this
      *            function causes the application to abort (i.e., crash)
      *
-     * See C API function: herr_t H5check_version()
+     * See C API function: @ref herr_t H5check_version(unsigned majnum, unsigned minnum, unsigned relnum)
      **/
     public synchronized static native int H5check_version(int majnum, int minnum, int relnum);
 
     /**
+     * @ingroup JH5
+     *
      * H5close flushes all data to disk, closes all file identifiers, and cleans up all memory used by the
      * library.
      *
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5close() throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5
+     *
      * H5open initialize the library.
      *
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5open() throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5
+     *
      * H5dont_atexit indicates to the library that an atexit() cleanup routine should not be installed. In
      * order to be effective, this routine must be called before any other HDF function calls, and must be
      * called each time the library is loaded/linked into the application (the first time and after it's been
-     * unloaded). <P> This is called by the static initializer, so this should never need to be explicitly
+     * unloaded). <p> This is called by the static initializer, so this should never need to be explicitly
      * called by a Java program.
      *
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     private synchronized static native int H5dont_atexit() throws HDF5LibraryException;
 
     /**
-     * Turn off error handling. By default, the C library prints the error stack of the HDF-5 C library on
+     * @ingroup JH5
+     *
+     * Turn off error handling. By default, the C library prints the error stack of the HDF5 C library on
      * stdout. This behavior may be disabled by calling H5error_off().
      *
      * @return a non-negative value if successful
@@ -445,29 +484,35 @@ public class H5 implements java.io.Serializable {
     public synchronized static native int H5error_off();
 
     /**
-     * Turn on error handling. By default, the C library prints the error stack of the HDF-5 C library on
+     * @ingroup JH5
+     *
+     * Turn on error handling. By default, the C library prints the error stack of the HDF5 C library on
      * stdout. This behavior may be re-enabled by calling H5error_on().
      */
     public synchronized static native void H5error_on();
 
     /**
+     * @ingroup JH5
+     *
      * H5garbage_collect collects on all free-lists of all types.
      *
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5garbage_collect() throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5
+     *
      * H5get_libversion retrieves the major, minor, and release numbers of the version of the HDF library
      * which is linked to the application.
      *
      * @param libversion
      *            The version information of the HDF library.
      *
-     *            <pre>
+     * <pre>
      *      libversion[0] = The major version of the library.
      *      libversion[1] = The minor version of the library.
      *      libversion[2] = The release number of the library.
@@ -475,11 +520,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful, along with the version information.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5get_libversion(int[] libversion) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5
+     *
      * H5set_free_list_limits
      *      Sets limits on the different kinds of free lists.  Setting a value
      *      of -1 for a limit means no limit of that type.  These limits are global
@@ -506,7 +553,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful, along with the version information.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5set_free_list_limits(int reg_global_lim, int reg_list_lim,
                                                                  int arr_global_lim, int arr_list_lim,
@@ -514,6 +561,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5
+     *
      * H5export_dataset is a utility function to save data in a file.
      *
      * @param file_export_name
@@ -529,7 +578,7 @@ public class H5 implements java.io.Serializable {
      *            3 - export data as binary Big Endian.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5export_dataset(String file_export_name, long file_id,
                                                             String object_path, int binary_order)
@@ -551,13 +600,15 @@ public class H5 implements java.io.Serializable {
      *            3 - export data as binary Big Endian.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5export_attribute(String file_export_name, long dataset_id,
                                                               String attribute_name, int binary_order)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5
+     *
      * H5is_library_threadsafe Checks to see if the library was built with thread-safety enabled.
      *
      * @return true if hdf5 library implements threadsafe
@@ -572,11 +623,23 @@ public class H5 implements java.io.Serializable {
 
     // ////////////////////////////////////////////////////////////
     // //
-    // H5A: HDF5 1.8 Attribute Interface API Functions //
+    // H5A: HDF5 Attribute Interface API Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5A Java Attribute (H5A) Interface
+     *
+     * An HDF5 attribute is a small metadata object describing the nature and/or intended usage of a primary
+     *data object. A primary data object may be a dataset, group, or committed datatype.
+     *
+     * @see H5A, C-API
+     *
+     * @see @ref H5A_UG, User Guide
+     **/
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aclose terminates access to the attribute specified by its identifier, attr_id.
      *
      * @param attr_id
@@ -585,7 +648,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Aclose(long attr_id) throws HDF5LibraryException
     {
@@ -601,6 +664,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Aclose(long attr_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Acopy copies the content of one attribute to another.
      *
      * @param src_aid
@@ -611,11 +676,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Acopy(long src_aid, long dst_aid) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Acreate creates an attribute, attr_name, which is attached to the object specified by the identifier
      * loc_id.
      *
@@ -635,7 +702,7 @@ public class H5 implements java.io.Serializable {
      * @return An attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            Name is null.
      **/
@@ -652,6 +719,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Acreate2 an attribute, attr_name, which is attached to the object specified by the identifier loc_id.
      *
      * @see public static long H5Acreate( long loc_id, String attr_name, long type_id, long space_id, long
@@ -662,6 +731,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Acreate_by_name creates an attribute, attr_name, which is attached to the object specified by loc_id
      * and obj_name.
      *
@@ -685,7 +756,7 @@ public class H5 implements java.io.Serializable {
      * @return An attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -709,6 +780,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Adelete removes the attribute specified by its name, name, from a dataset, group, or named datatype.
      *
      * @param loc_id
@@ -719,7 +792,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -727,6 +800,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Adelete_by_idx removes an attribute, specified by its location in an index, from an object.
      *
      * @param loc_id
@@ -743,7 +818,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            obj_name is null.
      **/
@@ -752,6 +827,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Adelete_by_name removes the attribute attr_name from an object specified by location and name, loc_id
      * and obj_name, respectively.
      *
@@ -767,7 +844,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -776,6 +853,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aexists determines whether the attribute attr_name exists on the object specified by obj_id.
      *
      * @param obj_id
@@ -786,7 +865,7 @@ public class H5 implements java.io.Serializable {
      * @return boolean true if an attribute with a given name exists.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            attr_name is null.
      **/
@@ -794,6 +873,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aexists_by_name determines whether the attribute attr_name exists on an object. That object is
      * specified by its location and name, loc_id and obj_name, respectively.
      *
@@ -809,7 +890,7 @@ public class H5 implements java.io.Serializable {
      * @return boolean true if an attribute with a given name exists, otherwise returns false.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -818,6 +899,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_info retrieves attribute information, by attribute identifier.
      *
      * @param attr_id
@@ -826,11 +909,13 @@ public class H5 implements java.io.Serializable {
      * @return A buffer(H5A_info_t) for Attribute information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native H5A_info_t H5Aget_info(long attr_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_info_by_idx Retrieves attribute information, by attribute index position.
      *
      * @param loc_id
@@ -849,7 +934,7 @@ public class H5 implements java.io.Serializable {
      * @return A buffer(H5A_info_t) for Attribute information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            obj_name is null.
      **/
@@ -859,6 +944,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_info_by_name Retrieves attribute information, by attribute name.
      *
      * @param loc_id
@@ -873,7 +960,7 @@ public class H5 implements java.io.Serializable {
      * @return A buffer(H5A_info_t) for Attribute information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            obj_name is null.
      **/
@@ -882,6 +969,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_name retrieves the name of an attribute specified by the identifier, attr_id.
      *
      * @param attr_id
@@ -890,11 +979,13 @@ public class H5 implements java.io.Serializable {
      * @return String for Attribute name.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Aget_name(long attr_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_name_by_idx retrieves the name of an attribute that is attached to an object, which is specified
      * by its location and name, loc_id and obj_name, respectively.
      *
@@ -923,6 +1014,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_space retrieves a copy of the dataspace for an attribute.
      *
      * @param attr_id
@@ -931,7 +1024,7 @@ public class H5 implements java.io.Serializable {
      * @return attribute dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Aget_space(long attr_id) throws HDF5LibraryException
     {
@@ -947,6 +1040,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Aget_space(long attr_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_storage_size returns the amount of storage that is required for the specified attribute,
      * attr_id.
      *
@@ -956,11 +1051,13 @@ public class H5 implements java.io.Serializable {
      * @return the amount of storage size allocated for the attribute; otherwise returns 0 (zero)
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Aget_storage_size(long attr_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_type retrieves a copy of the datatype for an attribute.
      *
      * @param attr_id
@@ -969,7 +1066,7 @@ public class H5 implements java.io.Serializable {
      * @return a datatype identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Aget_type(long attr_id) throws HDF5LibraryException
     {
@@ -985,6 +1082,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Aget_type(long attr_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aopen opens an existing attribute, attr_name, that is attached to an object specified an object
      * identifier, object_id.
      *
@@ -998,7 +1097,7 @@ public class H5 implements java.io.Serializable {
      * @return An attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            Name is null.
      **/
@@ -1018,6 +1117,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aopen_by_idx opens an existing attribute that is attached to an object specified by location and
      * name, loc_id and obj_name, respectively
      *
@@ -1039,7 +1140,7 @@ public class H5 implements java.io.Serializable {
      * @return An attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            Name is null.
      **/
@@ -1061,6 +1162,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aopen_by_name Opens an attribute for an object by object name and attribute name
      *
      * @param loc_id
@@ -1077,7 +1180,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns an attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            obj_name is null.
      **/
@@ -1098,6 +1201,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer from the file.
      *
@@ -1113,7 +1218,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1122,6 +1227,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer from the file.
      *
@@ -1135,7 +1242,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1146,6 +1253,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer from the file.
      *
@@ -1159,7 +1268,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1170,6 +1279,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into data object from the file.
      *
@@ -1187,7 +1298,7 @@ public class H5 implements java.io.Serializable {
      * @exception HDF5Exception
      *            Failure in the data conversion.
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null. See public synchronized static native int H5Aread( )
      **/
@@ -1269,6 +1380,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of double from the file.
      *
@@ -1284,7 +1397,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1293,6 +1406,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of double from the file.
      *
@@ -1306,7 +1421,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1332,7 +1447,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1341,6 +1456,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of float from the file.
      *
@@ -1354,7 +1471,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1365,6 +1482,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of int from the file.
      *
@@ -1380,7 +1499,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1389,6 +1508,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of int from the file.
      *
@@ -1402,7 +1523,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1413,6 +1534,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of long from the file.
      *
@@ -1428,7 +1551,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1437,6 +1560,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of long from the file.
      *
@@ -1450,7 +1575,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1461,6 +1586,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of String from the file.
      *
@@ -1474,7 +1601,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1482,6 +1609,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of short from the file.
      *
@@ -1497,7 +1626,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1506,6 +1635,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer  of shortfrom the file.
      *
@@ -1519,7 +1650,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1530,6 +1661,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of variable-lenght from the file.
      *
@@ -1543,7 +1676,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1551,6 +1684,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of String from the file.
      *
@@ -1564,7 +1699,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1572,6 +1707,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of variable-lenght strings from the file.
      *
@@ -1585,7 +1722,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *             data buffer is null.
      **/
@@ -1593,6 +1730,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is read into buffer of string from the file.
      *
@@ -1606,7 +1745,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -1614,8 +1753,10 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Arename changes the name of attribute that is attached to the object specified by loc_id. The
-     *attribute named old_attr_name is renamed new_attr_name.
+     * attribute named old_attr_name is renamed new_attr_name.
      *
      * @param loc_id
      *            IN: Location or object identifier; may be dataset or group
@@ -1627,7 +1768,7 @@ public class H5 implements java.io.Serializable {
      * @return A non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            Name is null.
      **/
@@ -1635,6 +1776,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Arename_by_name changes the name of attribute that is attached to the object specified by loc_id and
      * obj_name. The attribute named old_attr_name is renamed new_attr_name.
      *
@@ -1652,7 +1795,7 @@ public class H5 implements java.io.Serializable {
      * @return A non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            Name is null.
      **/
@@ -1661,6 +1804,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buf to the file.
      *
@@ -1676,7 +1821,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1685,6 +1830,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buf to the file.
      *
@@ -1698,7 +1845,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1709,6 +1856,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buf to the file.
      *
@@ -1722,7 +1871,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1733,6 +1882,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from data object to the file.
      *
@@ -1750,7 +1901,7 @@ public class H5 implements java.io.Serializable {
      * @exception HDF5Exception
      *            Failure in the data conversion.
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data object is null
      **/
@@ -1809,6 +1960,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of double to the file.
      *
@@ -1824,7 +1977,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *             Error from the HDF-5 Library.
+     *             Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1833,6 +1986,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of double to the file.
      *
@@ -1846,7 +2001,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1857,6 +2012,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of float to the file.
      *
@@ -1872,7 +2029,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1881,6 +2038,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of float to the file.
      *
@@ -1894,7 +2053,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1905,6 +2064,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of int to the file.
      *
@@ -1920,7 +2081,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1929,6 +2090,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of int to the file.
      *
@@ -1942,7 +2105,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1953,6 +2116,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of long to the file.
      *
@@ -1968,7 +2133,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -1977,6 +2142,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of long to the file.
      *
@@ -1990,7 +2157,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -2001,6 +2168,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of short to the file.
      *
@@ -2016,7 +2185,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -2025,6 +2194,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of short to the file.
      *
@@ -2038,7 +2209,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -2049,6 +2220,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of string to the file.
      *
@@ -2062,7 +2235,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -2070,6 +2243,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
      * mem_type_id. The entire attribute is written from buffer of variable-lenght to the file.
      *
@@ -2083,7 +2258,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data is null.
      **/
@@ -2091,6 +2266,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Awrite_VLStrings writes a variable length String dataset, specified by its identifier attr_id, from
      * the application memory buffer buffer of variable-lenght strings into the file.
      *
@@ -2106,7 +2283,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -2115,6 +2292,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aget_create_plist retrieves a copy of the attribute creation property list identifier.
      *
      * @param attr_id
@@ -2123,7 +2302,7 @@ public class H5 implements java.io.Serializable {
      * @return identifier for the attribute's creation property list if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Aget_create_plist(long attr_id) throws HDF5LibraryException
     {
@@ -2139,6 +2318,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Aget_create_plist(long attr_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aiterate2 iterates over the attributes attached to a dataset, named datatype, or group, as
      * specified by obj_id. For each attribute, user-provided data, op_data, with additional information
      * as defined below, is passed to a user-defined function, op, which operates on that attribute.
@@ -2171,7 +2352,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -2180,6 +2361,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5A
+     *
      * H5Aiterate_by_name iterates over the attributes attached to the dataset or group specified with loc_id
      * and obj_name. For each attribute, user-provided data, op_data, with additional information as defined
      * below, is passed to a user-defined function, op, which operates on that attribute.
@@ -2216,7 +2399,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -2262,8 +2445,13 @@ public class H5 implements java.io.Serializable {
     // H5D: Datasets Interface Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5D Java Datasets (H5D) Interface
+     **/
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dcopy copies the content of one dataset to another dataset.
      *
      * @param src_did
@@ -2274,11 +2462,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Dcopy(long src_did, long dst_did) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dclose ends access to a dataset specified by dataset_id and releases resources used by it.
      *
      * @param dataset_id
@@ -2287,7 +2477,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Dclose(long dataset_id) throws HDF5LibraryException
     {
@@ -2303,6 +2493,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Dclose(long dataset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dcreate creates a new dataset named name at the location specified by loc_id.
      *
      * @param loc_id
@@ -2323,7 +2515,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataset identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -2340,6 +2532,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dcreate2 creates a new dataset named name at the location specified by loc_id.
      *
      * @see public static int H5Dcreate(int loc_id, String name, int type_id, int space_id, int lcpl_id, int
@@ -2350,6 +2544,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dcreate_anon creates a dataset in the file specified by loc_id.
      *
      * @param loc_id
@@ -2366,7 +2562,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataset identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Dcreate_anon(long loc_id, long type_id, long space_id, long dcpl_id, long dapl_id)
         throws HDF5LibraryException
@@ -2385,6 +2581,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dfill explicitly fills the dataspace selection in memory, space_id, with the fill value specified in
      * fill.
      *
@@ -2400,7 +2598,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Dataspace describing memory buffer and containing the selection to be filled.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -2409,6 +2607,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dget_access_plist returns an identifier for a copy of the dataset access property list for a dataset.
      *
      * @param dset_id
@@ -2417,11 +2617,13 @@ public class H5 implements java.io.Serializable {
      * @return a dataset access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Dget_access_plist(long dset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dget_create_plist returns an identifier for a copy of the dataset creation property list for a
      * dataset.
      *
@@ -2430,7 +2632,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataset creation property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Dget_create_plist(long dataset_id) throws HDF5LibraryException
     {
@@ -2446,6 +2648,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Dget_create_plist(long dataset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dget_offset returns the address in the file of the dataset dset_id.
      *
      * @param dset_id
@@ -2454,11 +2658,13 @@ public class H5 implements java.io.Serializable {
      * @return the offset in bytes.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Dget_offset(long dset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dget_space returns an identifier for a copy of the dataspace for a dataset.
      *
      * @param dataset_id
@@ -2467,7 +2673,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Dget_space(long dataset_id) throws HDF5LibraryException
     {
@@ -2483,6 +2689,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Dget_space(long dataset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dget_space_status determines whether space has been allocated for the dataset dset_id.
      *
      * @param dset_id
@@ -2491,11 +2699,13 @@ public class H5 implements java.io.Serializable {
      * @return the space allocation status
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Dget_space_status(long dset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dget_storage_size returns the amount of storage that is required for the dataset.
      *
      * @param dataset_id
@@ -2504,12 +2714,14 @@ public class H5 implements java.io.Serializable {
      * @return he amount of storage space allocated for the dataset.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Dget_storage_size(long dataset_id)
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dget_type returns an identifier for a copy of the datatype for a dataset.
      *
      * @param dataset_id
@@ -2518,7 +2730,7 @@ public class H5 implements java.io.Serializable {
      * @return a datatype identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Dget_type(long dataset_id) throws HDF5LibraryException
     {
@@ -2534,6 +2746,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Dget_type(long dataset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Diterate iterates over all the data elements in the memory buffer buf, executing the callback
      * function operator once for each such data element.
      *
@@ -2552,7 +2766,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -2561,6 +2775,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dopen opens the existing dataset specified by a location identifier and name, loc_id and name,
      * respectively.
      *
@@ -2574,7 +2790,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataset identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -2591,6 +2807,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dopen2 opens the existing dataset specified by a location identifier and name, loc_id and name,
      * respectively.
      *
@@ -2600,6 +2818,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer buf.
      *
@@ -2621,7 +2841,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2631,6 +2851,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer buf.
      *
@@ -2650,7 +2872,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2662,6 +2884,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer buf.
      *
@@ -2681,7 +2905,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2693,6 +2917,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application data object.
      *
@@ -2716,7 +2942,7 @@ public class H5 implements java.io.Serializable {
      * @exception HDF5Exception
      *            Failure in the data conversion.
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data object is null.
      **/
@@ -2808,6 +3034,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of type double.
      *
@@ -2829,7 +3057,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2839,6 +3067,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of type double.
      *
@@ -2858,7 +3088,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2870,6 +3100,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of float.
      *
@@ -2891,7 +3123,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2901,6 +3133,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of float.
      *
@@ -2920,7 +3154,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2932,6 +3166,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of int.
      *
@@ -2953,7 +3189,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2963,6 +3199,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of int.
      *
@@ -2982,7 +3220,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -2994,6 +3232,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of long.
      *
@@ -3015,7 +3255,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3025,6 +3265,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of long.
      *
@@ -3044,7 +3286,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3056,6 +3298,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of string.
      *
@@ -3075,7 +3319,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3085,6 +3329,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of short.
      *
@@ -3106,7 +3352,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3116,6 +3362,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of short.
      *
@@ -3135,7 +3383,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3147,6 +3395,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of variable-lenght.
      *
@@ -3166,7 +3416,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3175,6 +3425,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of string.
      *
@@ -3194,7 +3446,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3203,6 +3455,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
      * application memory buffer of variable-lenght strings.
      *
@@ -3222,7 +3476,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data buffer is null.
      **/
@@ -3232,6 +3486,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dset_extent sets the current dimensions of the chunked dataset dset_id to the sizes specified in
      * size.
      *
@@ -3241,7 +3497,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Array containing the new magnitude of each dimension of the dataset.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      **/
@@ -3249,6 +3505,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dvlen_get_buf_size determines the number of bytes required to store the VL data from the dataset,
      * using the space_id for the selection in the dataset on disk and the type_id for the memory
      * representation of the VL data in memory.
@@ -3263,7 +3521,7 @@ public class H5 implements java.io.Serializable {
      * @return the size in bytes of the memory buffer required to store the VL data.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -3271,6 +3529,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dvlen_reclaim reclaims buffer used for VL data.
      *
      * @param type_id
@@ -3285,7 +3545,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      *
@@ -3297,6 +3557,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3318,7 +3580,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3328,6 +3590,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3347,7 +3611,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3359,6 +3623,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3378,7 +3644,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3390,6 +3656,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory data object into the file.
      *
@@ -3413,7 +3681,7 @@ public class H5 implements java.io.Serializable {
      * @exception HDF5Exception
      *            Failure in the data conversion.
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            data object is null.
      **/
@@ -3485,6 +3753,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3506,7 +3776,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3516,6 +3786,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3535,7 +3807,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3548,6 +3820,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3569,7 +3843,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3579,6 +3853,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3598,7 +3874,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3610,6 +3886,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3631,7 +3909,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3641,6 +3919,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3660,7 +3940,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3672,6 +3952,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3693,7 +3975,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3703,6 +3985,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3722,7 +4006,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3734,6 +4018,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3755,7 +4041,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3765,6 +4051,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3784,7 +4072,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3796,6 +4084,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3815,7 +4105,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3825,6 +4115,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
      * memory buffer into the file.
      *
@@ -3844,7 +4136,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3853,6 +4145,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dwrite_VLStrings writes a (partial) variable length String dataset, specified by its identifier
      * dataset_id, from the application memory buffer buf into the file.
      *
@@ -3874,7 +4168,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -3885,6 +4179,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Dflush causes all buffers associated with a dataset to be immediately flushed to disk without
      * removing the data from the cache.
      *
@@ -3892,11 +4188,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the dataset to be flushed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Dflush(long dset_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5D
+     *
      * H5Drefresh causes all buffers associated with a dataset to be cleared and immediately re-loaded with
      * updated contents from disk. This function essentially closes the dataset, evicts all metadata
      * associated with it from the cache, and then re-opens the dataset. The reopened dataset is automatically
@@ -3906,7 +4204,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the dataset to be refreshed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Drefresh(long dset_id) throws HDF5LibraryException;
 
@@ -3926,8 +4224,14 @@ public class H5 implements java.io.Serializable {
     // H5E: Error Stack //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     *
+     * @defgroup JH5E Java Error (H5E) Interface
+     */
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eauto_is_v2 determines whether the error auto reporting function for an error stack conforms to the
      * H5E_auto2_t typedef or the H5E_auto1_t typedef.
      *
@@ -3938,19 +4242,21 @@ public class H5 implements java.io.Serializable {
      *            H5E_auto1_t.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Eauto_is_v2(long stack_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eclear clears the error stack for the current thread. H5Eclear can fail if there are problems
      * initializing the library. <p> This may be used by exception handlers to assure that the error condition
-     * in the HDF-5 library has been reset.
+     * in the HDF5 library has been reset.
      *
      * @return Returns a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Eclear() throws HDF5LibraryException
     {
@@ -3959,6 +4265,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eclear clears the error stack specified by estack_id, or, if estack_id is set to H5E_DEFAULT, the
      * error stack for the current thread.
      *
@@ -3966,11 +4274,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Error stack identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static void H5Eclear(long stack_id) throws HDF5LibraryException { H5Eclear2(stack_id); }
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eclear2 clears the error stack specified by estack_id, or, if estack_id is set to H5E_DEFAULT, the
      * error stack for the current thread.
      *
@@ -3978,33 +4288,39 @@ public class H5 implements java.io.Serializable {
      *            IN: Error stack identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Eclear2(long stack_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eclose_msg closes an error message identifier, which can be either a major or minor message.
      *
      * @param err_id
      *            IN: Error message identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Eclose_msg(long err_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eclose_stack closes the object handle for an error stack and releases its resources.
      *
      * @param stack_id
      *            IN: Error stack identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Eclose_stack(long stack_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Ecreate_msg adds an error message to an error class defined by client library or application program.
      *
      * @param cls_id
@@ -4017,7 +4333,7 @@ public class H5 implements java.io.Serializable {
      * @return a message identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            msg is null.
      **/
@@ -4025,16 +4341,20 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Ecreate_stack creates a new empty error stack and returns the new stack's identifier.
      *
      * @return an error stack identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Ecreate_stack() throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eget_class_name retrieves the name of the error class specified by the class identifier.
      *
      * @param class_id
@@ -4043,23 +4363,27 @@ public class H5 implements java.io.Serializable {
      * @return the name of the error class
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Eget_class_name(long class_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eget_current_stack copies the current error stack and returns an error stack identifier for the new
      * copy.
      *
      * @return an error stack identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Eget_current_stack() throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eset_current_stack replaces the content of the current error stack with a copy of the content of the
      * error stack specified by estack_id.
      *
@@ -4067,11 +4391,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Error stack identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Eset_current_stack(long stack_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eget_msg retrieves the error message including its length and type.
      *
      * @param msg_id
@@ -4082,12 +4408,14 @@ public class H5 implements java.io.Serializable {
      * @return the error message
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Eget_msg(long msg_id, int[] type_list)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eget_num retrieves the number of error records in the error stack specified by estack_id (including
      * major, minor messages and description).
      *
@@ -4097,12 +4425,14 @@ public class H5 implements java.io.Serializable {
      * @return the number of error messages
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Eget_num(long stack_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eprint2 prints the error stack specified by estack_id on the specified stream, stream.
      *
      * @param stack_id
@@ -4112,12 +4442,14 @@ public class H5 implements java.io.Serializable {
      *            IN: File pointer, or stderr if null.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Eprint2(long stack_id, Object stream)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Epop deletes the number of error records specified in count from the top of the error stack specified
      * by estack_id (including major, minor messages and description).
      *
@@ -4127,11 +4459,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Version of the client library or application to which the error class belongs.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Epop(long stack_id, long count) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Epush pushes a new error record onto the error stack specified by estack_id.
      *
      * @param stack_id
@@ -4152,7 +4486,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Error description string.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            file, func, or msg is null.
      **/
@@ -4162,6 +4496,8 @@ public class H5 implements java.io.Serializable {
         H5Epush2(stack_id, file, func, line, cls_id, maj_id, min_id, msg);
     }
     /**
+     * @ingroup JH5E
+     *
      * H5Epush2 pushes a new error record onto the error stack specified by estack_id.
      *
      * @param stack_id
@@ -4182,7 +4518,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Error description string.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            file, func, or msg is null.
      **/
@@ -4191,6 +4527,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eregister_class registers a client library or application program to the HDF5 error API so that the
      * client library or application program can report errors together with HDF5 library.
      *
@@ -4204,7 +4542,7 @@ public class H5 implements java.io.Serializable {
      * @return a class identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -4212,17 +4550,21 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Eunregister_class removes the error class specified by class_id.
      *
      * @param class_id
      *            IN: Error class identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Eunregister_class(long class_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5E
+     *
      * H5Ewalk walks the error stack specified by estack_id for the current thread and calls the
      * function specified in func for each error along the way.
      *
@@ -4236,7 +4578,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Data to be passed with func.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            func is null.
      **/
@@ -4246,6 +4588,8 @@ public class H5 implements java.io.Serializable {
         H5Ewalk2(stack_id, direction, func, client_data);
     }
     /**
+     * @ingroup JH5E
+     *
      * H5Ewalk2 walks the error stack specified by estack_id for the current thread and calls the
      * function specified in func for each error along the way.
      *
@@ -4259,7 +4603,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Data to be passed with func.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            func is null.
      **/
@@ -4298,8 +4642,14 @@ public class H5 implements java.io.Serializable {
     // H5F: File Interface Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     *
+     * @defgroup JH5F Java File (H5F) Interface
+     */
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fclose terminates access to an HDF5 file.
      *
      * @param file_id
@@ -4308,7 +4658,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Fclose(long file_id) throws HDF5LibraryException
     {
@@ -4324,6 +4674,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Fclose(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fopen opens an existing file and is the primary function for accessing existing HDF5 files.
      *
      * @param name
@@ -4336,7 +4688,7 @@ public class H5 implements java.io.Serializable {
      * @return a file identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -4356,6 +4708,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Freopen reopens an HDF5 file.
      *
      * @param file_id
@@ -4364,7 +4718,7 @@ public class H5 implements java.io.Serializable {
      * @return a new file identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Freopen(long file_id) throws HDF5LibraryException
     {
@@ -4380,25 +4734,27 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Freopen(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fcreate is the primary function for creating HDF5 files.
      *
      * @param name
      *            Name of the file to access.
      * @param flags
      *            File access flags. Possible values include:
-     *            <UL>
-     *            <LI>
-     *            H5F_ACC_RDWR Allow read and write access to file.</LI>
-     *            <LI>
-     *            H5F_ACC_RDONLY Allow read-only access to file.</LI>
-     *            <LI>
-     *            H5F_ACC_TRUNC Truncate file, if it already exists, erasing all data previously stored in the
-     *                          file.</LI>
-     *            <LI>
-     *            H5F_ACC_EXCL Fail if file already exists.</LI>
-     *            <LI>
-     *            H5P_DEFAULT Apply default file access and creation properties.</LI>
-     *            </UL>
+     *            <ul>
+     *            <li>
+     *            @ref H5F_ACC_RDWR Allow read and write access to file.</li>
+     *            <li>
+     *            @ref H5F_ACC_RDONLY Allow read-only access to file.</li>
+     *            <li>
+     *            @ref H5F_ACC_TRUNC Truncate file, if it already exists, erasing all data previously stored
+     *                               in the file.</li>
+     *            <li>
+     *            @ref H5F_ACC_EXCL Fail if file already exists.</li>
+     *            <li>
+     *            @ref H5P_DEFAULT Apply default file access and creation properties.</li>
+     *            </ul>
      *
      * @param create_id
      *            File creation property list identifier, used when modifying default file meta-data. Use
@@ -4411,7 +4767,7 @@ public class H5 implements java.io.Serializable {
      * @return a file identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -4431,8 +4787,10 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fflush causes all buffers associated with a file or object to be immediately flushed (written) to
-     * disk without removing the data from the (memory) cache. <P> After this call completes, the file (or
+     * disk without removing the data from the (memory) cache. <p> After this call completes, the file (or
      * object) is in a consistent state and all data written to date is assured to be permanent.
      *
      * @param object_id
@@ -4440,9 +4798,9 @@ public class H5 implements java.io.Serializable {
      *            associated with the file, including the file itself, a dataset, a group, an attribute,
      *            or a named data type.
      * @param scope
-     *            specifies the scope of the flushing action, in the case that the HDF-5 file is not a single
+     *            specifies the scope of the flushing action, in the case that the HDF5 file is not a single
      *            physical file.
-     *            <P> Valid values are:
+     *            <p> Valid values are:
      *            <UL>
      *            <LI> H5F_SCOPE_GLOBAL Flushes the entire virtual file.</LI>
      *            <LI> H5F_SCOPE_LOCAL Flushes only the specified file.</LI>
@@ -4451,11 +4809,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Fflush(long object_id, int scope) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_access_plist returns the file access property list identifier of the specified file.
      *
      * @param file_id
@@ -4464,7 +4824,7 @@ public class H5 implements java.io.Serializable {
      * @return a file access property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Fget_access_plist(long file_id) throws HDF5LibraryException
     {
@@ -4480,6 +4840,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Fget_access_plist(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_create_plist returns a file creation property list identifier identifying the creation
      * properties used to create this file.
      *
@@ -4489,7 +4851,7 @@ public class H5 implements java.io.Serializable {
      * @return a file creation property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Fget_create_plist(long file_id) throws HDF5LibraryException
     {
@@ -4505,6 +4867,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Fget_create_plist(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_filesize retrieves the file size of the HDF5 file. This function
      *              is called after an existing file is opened in order
      *              to learn the true size of the underlying file.
@@ -4515,11 +4879,13 @@ public class H5 implements java.io.Serializable {
      * @return the file size of the HDF5 file
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Fget_filesize(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_freespace returns the amount of space that is unused by any objects in the file.
      *
      * @param file_id
@@ -4528,11 +4894,13 @@ public class H5 implements java.io.Serializable {
      * @return the amount of free space in the file
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Fget_freespace(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_intent retrieves the intended access mode flag passed with H5Fopen when the file was opened.
      *
      * @param file_id
@@ -4541,11 +4909,13 @@ public class H5 implements java.io.Serializable {
      * @return the intended access mode flag, as originally passed with H5Fopen.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Fget_intent(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_fileno retrieves the "file number" for an open file.
      *
      * @param file_id
@@ -4554,11 +4924,13 @@ public class H5 implements java.io.Serializable {
      * @return the unique file number for the file.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Fget_fileno(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_mdc_hit_rate queries the metadata cache of the target file to obtain its hit rate (cache hits /
      * (cache hits + cache misses)) since the last time hit rate statistics were reset.
      *
@@ -4568,11 +4940,13 @@ public class H5 implements java.io.Serializable {
      * @return the double in which the hit rate is returned.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native double H5Fget_mdc_hit_rate(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_mdc_size queries the metadata cache of the target file for the desired size information.
      *
      * @param file_id
@@ -4588,7 +4962,7 @@ public class H5 implements java.io.Serializable {
      * @return current number of entries in the cache
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            metadata_cache is null.
      **/
@@ -4596,6 +4970,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_name retrieves the name of the file to which the object obj_id belongs.
      *
      * @param obj_id
@@ -4604,11 +4980,13 @@ public class H5 implements java.io.Serializable {
      * @return the filename.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Fget_name(long obj_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_obj_count returns the number of open object identifiers for the file.
      *
      * @param file_id
@@ -4628,12 +5006,14 @@ public class H5 implements java.io.Serializable {
      * @return the number of open objects.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Fget_obj_count(long file_id, int types)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_obj_ids returns the list of identifiers for all open HDF5 objects fitting the specified
      * criteria.
      *
@@ -4649,7 +5029,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of objects placed into obj_id_list.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            obj_id_list is null.
      **/
@@ -4658,15 +5038,17 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fis_hdf5 determines whether a file is in the HDF5 format.
      *
      * @param name
      *            File name to check format.
      *
-     * @return true if is HDF-5, false if not.
+     * @return true if is HDF5, false if not.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      *
@@ -4677,6 +5059,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fis_accessible determines if the file can be opened with the given fapl.
      *
      * @param name
@@ -4687,7 +5071,7 @@ public class H5 implements java.io.Serializable {
      * @return true if file is accessible, false if not.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -4695,6 +5079,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fmount mounts the file specified by child_id onto the group specified by loc_id and name using the
      * mount properties plist_id.
      *
@@ -4710,7 +5096,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -4718,6 +5104,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * Given a mount point, H5Funmount disassociates the mount point's file from the file mounted there.
      *
      * @param loc_id
@@ -4728,7 +5116,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -4736,6 +5124,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Freset_mdc_hit_rate_stats resets the hit rate statistics counters in the metadata cache associated
      * with the specified file.
      *
@@ -4743,12 +5133,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Freset_mdc_hit_rate_stats(long file_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_info returns global information for the file associated with the
      * object identifier obj_id.
      *
@@ -4757,11 +5149,13 @@ public class H5 implements java.io.Serializable {
      * @return A buffer(H5F_info2_t) for current "global" information about file
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native H5F_info2_t H5Fget_info(long obj_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fclear_elink_file_cache evicts all the cached child files in the specified file's external file
      * cache, causing them to be closed if there is nothing else holding them open.
      *
@@ -4769,12 +5163,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Fclear_elink_file_cache(long file_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fstart_swmr_write will activate SWMR writing mode for a file associated with file_id. This routine
      * will prepare and ensure the file is safe for SWMR writing.
      *
@@ -4782,22 +5178,26 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Fstart_swmr_write(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fstart_mdc_logging starts logging metadata cache events if logging was previously enabled.
      *
      * @param file_id
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Fstart_mdc_logging(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fstop_mdc_logging stops logging metadata cache events if logging was previously enabled and is
      * currently ongoing.
      *
@@ -4805,11 +5205,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Fstop_mdc_logging(long file_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_mdc_logging_status gets the current metadata cache logging status.
      *
      * @param file_id
@@ -4821,7 +5223,7 @@ public class H5 implements java.io.Serializable {
      *             mdc_logging_status[1] = is_currently_logging, whether events are currently being logged
      *
      * @exception HDF5LibraryException
-     *             Error from the HDF-5 Library.
+     *             Error from the HDF5 Library.
      * @exception NullPointerException
      *            mdc_logging_status is null.
      **/
@@ -4830,6 +5232,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fget_dset_no_attrs_hint gets the file-level setting to create minimized dataset object headers.
      *
      * @param file_id
@@ -4838,12 +5242,14 @@ public class H5 implements java.io.Serializable {
      * @return true if the file-level is set to create minimized dataset object headers, false if not.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Fget_dset_no_attrs_hint(long file_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fset_dset_no_attrs_hint sets the file-level setting to create minimized dataset object headers.
      *
      * @param file_id
@@ -4852,12 +5258,14 @@ public class H5 implements java.io.Serializable {
      *            the minimize hint setting
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Fset_dset_no_attrs_hint(long file_id, boolean minimize)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5F
+     *
      * H5Fset_libver_bounds sets a different low and high bounds while a file is open.
      *
      * @param file_id
@@ -4868,7 +5276,7 @@ public class H5 implements java.io.Serializable {
      *            IN: The latest version of the library that will be used for writing objects.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Fset_libver_bounds(long file_id, int low, int high)
         throws HDF5LibraryException;
@@ -4901,7 +5309,7 @@ public class H5 implements java.io.Serializable {
     // * @return a pointer to the file handle being used by the low-level
     // virtual file driver.
     // *
-    // * @exception HDF5LibraryException - Error from the HDF-5 Library.
+    // * @exception HDF5LibraryException - Error from the HDF5 Library.
     // **/
     // public synchronized static native Pointer file_handle
     // H5Fget_vfd_handle(int file_id, int fapl)
@@ -4918,7 +5326,7 @@ public class H5 implements java.io.Serializable {
     // *
     // * @return none
     // *
-    // * @exception HDF5LibraryException - Error from the HDF-5 Library.
+    // * @exception HDF5LibraryException - Error from the HDF5 Library.
     // * @exception NullPointerException - config_ptr is null.
     // **/
     // public synchronized static native void H5Fget_mdc_config(int file_id, H5AC_cache_config_t config_ptr)
@@ -4934,7 +5342,7 @@ public class H5 implements java.io.Serializable {
     // *
     // * @return none
     // *
-    // * @exception HDF5LibraryException - Error from the HDF-5 Library.
+    // * @exception HDF5LibraryException - Error from the HDF5 Library.
     // * @exception NullPointerException - config_ptr is null.
     // **/
     // public synchronized static native int H5Fset_mdc_config(int file_id, H5AC_cache_config_t config_ptr)
@@ -4979,8 +5387,13 @@ public class H5 implements java.io.Serializable {
     // H5G: Group Interface Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5G Java Group (H5G) Interface
+     **/
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gclose releases resources used by a group which was opened by a call to H5Gcreate() or H5Gopen().
      *
      * @param group_id
@@ -4989,7 +5402,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Gclose(long group_id) throws HDF5LibraryException
     {
@@ -5005,6 +5418,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Gclose(long group_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gcreate creates a new group with the specified name at the specified location, loc_id.
      *
      * @param loc_id
@@ -5022,7 +5437,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid group identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5043,6 +5458,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gcreate_anon creates a new empty group in the file specified by loc_id.
      *
      * @param loc_id
@@ -5056,7 +5473,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid group identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Gcreate_anon(long loc_id, long gcpl_id, long gapl_id) throws HDF5LibraryException
     {
@@ -5073,6 +5490,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gget_create_plist returns an identifier for the group creation property list associated with the
      * group specified by group_id.
      *
@@ -5082,11 +5501,13 @@ public class H5 implements java.io.Serializable {
      * @return an identifier for the group's creation property list
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Gget_create_plist(long group_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gget_info retrieves information about the group specified by group_id. The information is returned in
      * the group_info struct.
      *
@@ -5096,11 +5517,13 @@ public class H5 implements java.io.Serializable {
      * @return a structure in which group information is returned
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native H5G_info_t H5Gget_info(long group_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gget_info_by_idx retrieves information about a group, according to the group's position within an
      * index.
      *
@@ -5120,7 +5543,7 @@ public class H5 implements java.io.Serializable {
      * @return a structure in which group information is returned
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5130,6 +5553,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gget_info_by_name retrieves information about the group group_name located in the file or group
      * specified by loc_id.
      *
@@ -5143,7 +5568,7 @@ public class H5 implements java.io.Serializable {
      * @return a structure in which group information is returned
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5151,6 +5576,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5G
+     *
      * retrieves information of all objects under the group (name) located in the file or group specified by
      * loc_id.
      *
@@ -5168,7 +5595,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      */
@@ -5185,6 +5612,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5G
+     *
      * retrieves information of all objects under the group (name) located in the file or group specified by
      * loc_id.
      *
@@ -5206,7 +5635,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      */
@@ -5219,6 +5648,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5G
+     *
      * retrieves information of all objects under the group (name) located in the file or group specified by
      * loc_id.
      *
@@ -5242,7 +5673,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      */
@@ -5255,6 +5686,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5G
+     *
      * retrieves information of all objects under the group (name) located in the file or group specified by
      * loc_id.
      *
@@ -5280,7 +5713,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      */
@@ -5331,6 +5764,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gget_obj_info_idx report the name and type of object with index 'idx' in a Group. The 'idx'
      * corresponds to the index maintained by H5Giterate. Each link is returned, so objects with multiple
      * links will be counted once for each link.
@@ -5349,7 +5784,7 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if successful, -1 if not.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      */
@@ -5373,6 +5808,8 @@ public class H5 implements java.io.Serializable {
      * a lot of time to finish if the number of objects is more than 10,000
      */
     /**
+     * @ingroup JH5G
+     *
      * retrieves information of all objects (recurvisely) under the group (name) located in the file or group
      * specified by loc_id up to maximum specified by objMax.
      *
@@ -5392,7 +5829,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      */
@@ -5433,6 +5870,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gn_members report the number of objects in a Group. The 'objects' include everything that will be
      * visited by H5Giterate. Each link is returned, so objects with multiple links will be counted once for
      * each link.
@@ -5445,7 +5884,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of members in the group or -1 if error.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      */
@@ -5467,6 +5906,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gopen opens an existing group, name, at the location specified by loc_id.
      *
      * @param loc_id
@@ -5479,7 +5920,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid group identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5499,6 +5940,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Gflush causes all buffers associated with a group to be immediately flushed to disk without
      * removing the data from the cache.
      *
@@ -5506,11 +5949,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the group to be flushed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Gflush(long group_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5G
+     *
      * H5Grefresh causes all buffers associated with a group to be cleared and immediately re-loaded
      * with updated contents from disk. This function essentially closes the group, evicts all metadata
      * associated with it from the cache, and then re-opens the group. The reopened group is automatically
@@ -5520,7 +5965,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the group to be refreshed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Grefresh(long group_id) throws HDF5LibraryException;
 
@@ -5553,8 +5998,13 @@ public class H5 implements java.io.Serializable {
     // H5I: HDF5 Identifier Interface API Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5I Java Identifier (H5I) Interface
+     **/
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iget_file_id obtains the file ID specified by the identifier, obj_id.
      *
      * @param obj_id
@@ -5563,11 +6013,13 @@ public class H5 implements java.io.Serializable {
      * @return the file ID.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Iget_file_id(long obj_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iget_name_long retrieves the name of an object specified by the identifier, obj_id.
      * @deprecated
      *
@@ -5581,12 +6033,14 @@ public class H5 implements java.io.Serializable {
      * @return the length of the name retrieved.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     @Deprecated
     public synchronized static native long H5Iget_name_long(long obj_id, String[] name, long size)
         throws HDF5LibraryException, NullPointerException;
     /**
+     * @ingroup JH5I
+     *
      * H5Iget_name retrieves the name of an object specified by the identifier, obj_id.
      *
      * @param obj_id
@@ -5595,11 +6049,13 @@ public class H5 implements java.io.Serializable {
      * @return String for Attribute name.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Iget_name(long obj_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iget_ref obtains the number of references outstanding specified by the identifier, obj_id.
      *
      * @param obj_id
@@ -5608,12 +6064,14 @@ public class H5 implements java.io.Serializable {
      * @return the reference count.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Iget_ref(long obj_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Idec_ref decrements the reference count specified by the identifier, obj_id.
      * If the reference count for an ID reaches zero, the object will be closed.
      *
@@ -5623,12 +6081,14 @@ public class H5 implements java.io.Serializable {
      * @return the reference count.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Idec_ref(long obj_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iinc_ref increments the reference count specified by the identifier, obj_id.
      *
      * @param obj_id
@@ -5637,12 +6097,14 @@ public class H5 implements java.io.Serializable {
      * @return the reference count.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Iinc_ref(long obj_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iget_type retrieves the type of the object identified by obj_id.
      *
      * @param obj_id
@@ -5651,11 +6113,13 @@ public class H5 implements java.io.Serializable {
      * @return the object type if successful; otherwise H5I_BADID.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Iget_type(long obj_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iget_type_ref retrieves the reference count on an ID type. The reference count is used by the library
      * to indicate when an ID type can be destroyed.
      *
@@ -5665,11 +6129,13 @@ public class H5 implements java.io.Serializable {
      * @return The current reference count on success, negative on failure.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Iget_type_ref(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Idec_type_ref decrements the reference count on an identifier type. The reference count is used by
      * the library to indicate when an identifier type can be destroyed. If the reference count reaches zero,
      * this function will destroy it.
@@ -5680,11 +6146,13 @@ public class H5 implements java.io.Serializable {
      * @return The current reference count on success, negative on failure.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Idec_type_ref(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iinc_type_ref increments the reference count on an ID type. The reference count is used by the
      * library to indicate when an ID type can be destroyed.
      *
@@ -5694,11 +6162,13 @@ public class H5 implements java.io.Serializable {
      * @return The current reference count on success, negative on failure.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Iinc_type_ref(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Inmembers returns the number of identifiers of the identifier type specified in type.
      *
      * @param type_id
@@ -5707,11 +6177,13 @@ public class H5 implements java.io.Serializable {
      * @return Number of identifiers of the specified identifier type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Inmembers(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iis_valid indicates if the identifier type specified in obj_id is valid.
      *
      * @param obj_id
@@ -5720,11 +6192,13 @@ public class H5 implements java.io.Serializable {
      * @return a boolean, true if the specified identifier id is valid
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Iis_valid(long obj_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Itype_exists indicates if the identifier type specified in type exists.
      *
      * @param type_id
@@ -5733,11 +6207,13 @@ public class H5 implements java.io.Serializable {
      * @return a boolean, true if the specified identifier type exists
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Itype_exists(int type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Iclear_type deletes all identifiers of the type identified by the argument type.
      *
      * @param type_id
@@ -5746,12 +6222,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Whether or not to force deletion of all identifiers
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Iclear_type(int type_id, boolean force)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5I
+     *
      * H5Idestroy_type deletes an entire identifier type. All identifiers of this type are destroyed
      * and no new identifiers of this type can be registered.
      *
@@ -5759,7 +6237,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of identifier type which is to be destroyed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Idestroy_type(int type_id) throws HDF5LibraryException;
 
@@ -5785,8 +6263,13 @@ public class H5 implements java.io.Serializable {
     // //////////////////////////////////////////////////////////////////
     // H5L: Link Interface Functions //
     // //////////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5L Java Link (H5L) Interface
+     **/
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lcopy copies a link from one location to another.
      *
      * @param src_loc
@@ -5803,7 +6286,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5812,6 +6295,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lcreate_external creates a new soft link to an external object, which is an object in a different
      * HDF5 file from the location of the link.
      *
@@ -5829,7 +6314,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5839,6 +6324,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lcreate_hard creates a new hard link to a pre-existing object in an HDF5 file.
      *
      * @param cur_loc
@@ -5855,7 +6342,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            cur_name or dst_name is null.
      **/
@@ -5864,6 +6351,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lcreate_soft creates a new soft link to an object in an HDF5 file.
      *
      * @param link_target
@@ -5878,7 +6367,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            link_name is null.
      **/
@@ -5887,6 +6376,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Ldelete removes the link specified from a group.
      *
      * @param loc_id
@@ -5897,7 +6388,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5905,6 +6396,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Ldelete_by_idx removes the nth link in a group according to the specified order and in the specified
      * index.
      *
@@ -5922,7 +6415,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            group_name is null.
      **/
@@ -5931,6 +6424,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lexists checks if a link with a particular name exists in a group.
      *
      * @param loc_id
@@ -5943,7 +6438,7 @@ public class H5 implements java.io.Serializable {
      * @return a boolean, true if the name exists, otherwise false.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5951,6 +6446,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lget_info returns information about the specified link.
      *
      * @param loc_id
@@ -5963,7 +6460,7 @@ public class H5 implements java.io.Serializable {
      * @return a buffer(H5L_info_t) for the link information.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -5971,6 +6468,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lget_info_by_idx opens a named datatype at the location specified by loc_id and return an identifier
      * for the datatype.
      *
@@ -5990,7 +6489,7 @@ public class H5 implements java.io.Serializable {
      * @return a buffer(H5L_info_t) for the link information.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            group_name is null.
      **/
@@ -6000,6 +6499,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lget_name_by_idx retrieves name of the nth link in a group, according to the order within a specified
      * field or index.
      *
@@ -6019,7 +6520,7 @@ public class H5 implements java.io.Serializable {
      * @return a String for the link name.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            group_name is null.
      **/
@@ -6028,6 +6529,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lget_value returns the link value of a symbolic link. Note that this function is a combination
      * of H5Lget_info(), H5Lget_val() and for external links, H5Lunpack_elink_val.
      *
@@ -6043,7 +6546,7 @@ public class H5 implements java.io.Serializable {
      * @return the link type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6052,6 +6555,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lget_value_by_idx retrieves value of the nth link in a group, according to the order within an index.
      * Note that this function is a combination of H5Lget_info(), H5Lget_val() and for external links,
      * H5Lunpack_elink_val.
@@ -6074,7 +6579,7 @@ public class H5 implements java.io.Serializable {
      * @return the link type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            group_name is null.
      **/
@@ -6084,6 +6589,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Literate iterates through links in a group.
      *
      * @param grp_id
@@ -6103,13 +6610,15 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Literate(long grp_id, int idx_type, int order, long idx,
                                                      H5L_iterate_t op, H5L_iterate_opdata_t op_data)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Literate_by_name iterates through links in a group.
      *
      * @param grp_id
@@ -6133,7 +6642,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            group_name is null.
      **/
@@ -6143,6 +6652,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lmove renames a link within an HDF5 file.
      *
      * @param src_loc
@@ -6159,7 +6670,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier to be associated with the new link.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6168,6 +6679,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lvisit recursively visits all links starting from a specified group.
      *
      * @param grp_id
@@ -6185,12 +6698,14 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Lvisit(long grp_id, int idx_type, int order, H5L_iterate_t op,
                                                    H5L_iterate_opdata_t op_data) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lvisit_by_name recursively visits all links starting from a specified group.
      *
      * @param loc_id
@@ -6212,7 +6727,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            group_name is null.
      **/
@@ -6222,6 +6737,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lis_registered tests whether a user-defined link class is currently registered,
      * either by the HDF5 Library or by the user through the use of H5Lregister.
      *
@@ -6233,11 +6750,13 @@ public class H5 implements java.io.Serializable {
      *            user-defined class identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Lis_registered(int link_cls_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5L
+     *
      * H5Lunregister unregisters a class of user-defined links, preventing them from being traversed, queried,
      * moved, etc.
      *
@@ -6245,7 +6764,7 @@ public class H5 implements java.io.Serializable {
      *            IN: User-defined link class identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Lunregister(int link_cls_id) throws HDF5LibraryException;
 
@@ -6279,8 +6798,13 @@ public class H5 implements java.io.Serializable {
     // H5O: HDF5 1.8 Object Interface API Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5O Java Object (H5O) Interface
+     **/
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oclose closes the group, dataset, or named datatype specified.
      *
      * @param object_id
@@ -6289,7 +6813,7 @@ public class H5 implements java.io.Serializable {
      * @return non-negative on success
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Oclose(long object_id) throws HDF5LibraryException
     {
@@ -6305,6 +6829,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Oclose(long object_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Ocopy copies the group, dataset or named datatype specified from the file or group specified by
      * source location to the destination location.
      *
@@ -6322,7 +6848,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link creation property list for the new hard link
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6331,6 +6857,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oget_comment retrieves the comment for the specified object.
      *
      * @param obj_id
@@ -6339,12 +6867,14 @@ public class H5 implements java.io.Serializable {
      * @return the comment
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Oget_comment(long obj_id)
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oset_comment sets the comment for the specified object.
      *
      * @param obj_id
@@ -6353,7 +6883,7 @@ public class H5 implements java.io.Serializable {
      *            IN: The new comment.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      * @deprecated As of HDF5 1.8 in favor of object attributes.
      **/
@@ -6362,6 +6892,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oget_comment_by_name retrieves the comment for an object.
      *
      * @param loc_id
@@ -6374,7 +6906,7 @@ public class H5 implements java.io.Serializable {
      * @return the comment
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6382,6 +6914,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oset_comment_by_name sets the comment for the specified object.
      *
      * @param loc_id
@@ -6394,7 +6928,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      *
@@ -6406,6 +6940,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oget_info retrieves the metadata for an object specified by an identifier.
      *
      * @param loc_id
@@ -6414,7 +6950,7 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6424,6 +6960,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oget_info retrieves the metadata for an object specified by an identifier.
      *
      * @param loc_id
@@ -6434,7 +6972,7 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6442,56 +6980,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Oget_info_by_name retrieves the metadata for an object, identifying the object by location and
-     * relative name.
+     * @ingroup JH5O
      *
-     * @param loc_id
-     *            IN: File or group identifier specifying location of group in which object is located
-     * @param name
-     *            IN: Relative name of group
-     * @param lapl_id
-     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
-     *                pass as H5P_DEFAULT.)
-     *
-     * @return object information
-     *
-     * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
-     * @exception NullPointerException
-     *            name is null.
-     **/
-    public static H5O_info_t H5Oget_info_by_name(long loc_id, String name, long lapl_id)
-        throws HDF5LibraryException, NullPointerException
-    {
-        return H5Oget_info_by_name(loc_id, name, HDF5Constants.H5O_INFO_ALL, lapl_id);
-    }
-
-    /**
-     * H5Oget_info_by_name retrieves the metadata for an object, identifying the object by location and
-     * relative name.
-     *
-     * @param loc_id
-     *            IN: File or group identifier specifying location of group in which object is located
-     * @param name
-     *            IN: Relative name of group
-     * @param fields
-     *            IN: Object fields to select
-     * @param lapl_id
-     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
-     *                pass as H5P_DEFAULT.)
-     *
-     * @return object information
-     *
-     * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
-     * @exception NullPointerException
-     *            name is null.
-     **/
-    public synchronized static native H5O_info_t H5Oget_info_by_name(long loc_id, String name, int fields,
-                                                                     long lapl_id)
-        throws HDF5LibraryException, NullPointerException;
-
-    /**
      * H5Oget_info_by_idx retrieves the metadata for an object, identifying the object by an index position.
      *
      * @param loc_id
@@ -6511,7 +7001,7 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6524,6 +7014,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oget_info_by_idx retrieves the metadata for an object, identifying the object by an index position.
      *
      * @param loc_id
@@ -6545,7 +7037,7 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6555,50 +7047,10 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Oget_native_info retrieves the native HDF5-specific metadata for an HDF5 object specified by an
-     * identifier. Native HDF5-specific metadata includes things like object header information and object
-     * storage layout information.
-     *
-     * @param loc_id
-     *            IN: Identifier for target object
-     *
-     * @return object information
-     *
-     * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
-     * @exception NullPointerException
-     *            name is null.
-     **/
-    public static H5O_native_info_t H5Oget_native_info(long loc_id)
-        throws HDF5LibraryException, NullPointerException
-    {
-        return H5Oget_native_info(loc_id, HDF5Constants.H5O_NATIVE_INFO_ALL);
-    }
-
-    /**
-     * H5Oget_native_info retrieves the native HDF5-specific metadata for an HDF5 object specified by an
-     * identifier. Native HDF5-specific metadata includes things like object header information and object
-     * storage layout information.
+     * @ingroup JH5O
      *
-     * @param loc_id
-     *            IN: Identifier for target object
-     * @param fields
-     *            IN: Object fields to select
-     *
-     * @return object information
-     *
-     * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
-     * @exception NullPointerException
-     *            name is null.
-     **/
-    public synchronized static native H5O_native_info_t H5Oget_native_info(long loc_id, int fields)
-        throws HDF5LibraryException, NullPointerException;
-
-    /**
-     * H5Oget_native_info_by_name retrieves the native HDF5-specific metadata for an HDF5 object, identifying
-     * the object by location and relative name. Native HDF5-specific metadata includes things like object
-     * header information and object storage layout information.
+     * H5Oget_info_by_name retrieves the metadata for an object, identifying the object by location and
+     * relative name.
      *
      * @param loc_id
      *            IN: File or group identifier specifying location of group in which object is located
@@ -6611,20 +7063,21 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
-    public static H5O_native_info_t H5Oget_native_info_by_name(long loc_id, String name, long lapl_id)
+    public static H5O_info_t H5Oget_info_by_name(long loc_id, String name, long lapl_id)
         throws HDF5LibraryException, NullPointerException
     {
-        return H5Oget_native_info_by_name(loc_id, name, HDF5Constants.H5O_NATIVE_INFO_ALL, lapl_id);
+        return H5Oget_info_by_name(loc_id, name, HDF5Constants.H5O_INFO_ALL, lapl_id);
     }
 
     /**
-     * H5Oget_native_info_by_name retrieves the native HDF5-specific metadata for an HDF5 object, identifying
-     * the object by location and relative name. Native HDF5-specific metadata includes things like object
-     * header information and object storage layout information.
+     * @ingroup JH5O
+     *
+     * H5Oget_info_by_name retrieves the metadata for an object, identifying the object by location and
+     * relative name.
      *
      * @param loc_id
      *            IN: File or group identifier specifying location of group in which object is located
@@ -6639,81 +7092,17 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
-    public synchronized static native H5O_native_info_t H5Oget_native_info_by_name(long loc_id, String name,
-                                                                                   int fields, long lapl_id)
+    public synchronized static native H5O_info_t H5Oget_info_by_name(long loc_id, String name, int fields,
+                                                                     long lapl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Oget_native_info_by_idx retrieves the native HDF5-specific metadata for an HDF5 object, identifying
-     * the object by an index position. Native HDF5-specific metadata includes things like object header
-     * information and object storage layout information.
-     *
-     * @param loc_id
-     *            IN: File or group identifier
-     * @param group_name
-     *            IN: Name of group, relative to loc_id, in which object is located
-     * @param idx_type
-     *            IN: Type of index by which objects are ordered
-     * @param order
-     *            IN: Order of iteration within index
-     * @param n
-     *            IN: Object to open
-     * @param lapl_id
-     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
-     *                pass as H5P_DEFAULT.)
-     *
-     * @return object information
-     *
-     * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
-     * @exception NullPointerException
-     *            name is null.
-     **/
-    public static H5O_native_info_t H5Oget_native_info_by_idx(long loc_id, String group_name, int idx_type,
-                                                              int order, long n, long lapl_id)
-        throws HDF5LibraryException, NullPointerException
-    {
-        return H5Oget_native_info_by_idx(loc_id, group_name, idx_type, order, n,
-                                         HDF5Constants.H5O_NATIVE_INFO_ALL, lapl_id);
-    }
-
-    /**
-     * H5Oget_native_info_by_idx retrieves the native HDF5-specific metadata for an HDF5 object, identifying
-     * the object by an index position. Native HDF5-specific metadata includes things like object header
-     * information and object storage layout information.
-     *
-     * @param loc_id
-     *            IN: File or group identifier
-     * @param group_name
-     *            IN: Name of group, relative to loc_id, in which object is located
-     * @param idx_type
-     *            IN: Type of index by which objects are ordered
-     * @param order
-     *            IN: Order of iteration within index
-     * @param n
-     *            IN: Object to open
-     * @param fields
-     *            IN: Object fields to select
-     * @param lapl_id
-     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
-     *                pass as H5P_DEFAULT.)
-     *
-     * @return object information
+     * @ingroup JH5O
      *
-     * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
-     * @exception NullPointerException
-     *            name is null.
-     **/
-    public synchronized static native H5O_native_info_t H5Oget_native_info_by_idx(
-        long loc_id, String group_name, int idx_type, int order, long n, int fields, long lapl_id)
-        throws HDF5LibraryException, NullPointerException;
-
-    /**
      * H5Olink creates a new hard link to an object in an HDF5 file.
      *
      * @param obj_id
@@ -6728,7 +7117,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Access property list identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6737,6 +7126,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oopen opens a group, dataset, or named datatype specified by a location and a path name.
      *
      * @param loc_id
@@ -6749,7 +7140,7 @@ public class H5 implements java.io.Serializable {
      * @return an object identifier for the opened object
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6769,6 +7160,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Ovisit recursively visits all objects accessible from a specified object.
      *
      * @param obj_id
@@ -6787,7 +7180,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6798,6 +7191,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5O
+     *
      * H5Ovisit recursively visits all objects accessible from a specified object.
      *
      * @param obj_id
@@ -6818,7 +7213,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6827,6 +7222,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Ovisit_by_name recursively visits all objects starting from a specified object.
      *
      * @param loc_id
@@ -6849,7 +7246,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6862,6 +7259,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5O
+     *
      * H5Ovisit_by_name recursively visits all objects starting from a specified object.
      *
      * @param loc_id
@@ -6886,7 +7285,7 @@ public class H5 implements java.io.Serializable {
      *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6896,6 +7295,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oexists_by_name is used by an application to check that an existing link resolves to an object.
      * Primarily, it is designed to check for dangling soft, external, or user-defined links.
      *
@@ -6909,7 +7310,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns TRUE or FALSE if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -6917,24 +7318,28 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Odecr_refcount decrements the hard link reference count for an object.
      *
      * @param object_id
      *            IN: Object identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Odecr_refcount(long object_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oincr_refcount increments the hard link reference count for an object.
      *
      * @param object_id
      *            IN: Object identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Oincr_refcount(long object_id) throws HDF5LibraryException;
 
@@ -6949,7 +7354,7 @@ public class H5 implements java.io.Serializable {
      * @return an object identifier for the opened object
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Oopen_by_token(long loc_id, H5O_token_t token) throws HDF5LibraryException
     {
@@ -6968,6 +7373,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oopen_by_idx opens the nth object in the group specified.
      *
      * @param loc_id
@@ -6986,7 +7393,7 @@ public class H5 implements java.io.Serializable {
      * @return an object identifier for the opened object
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            group_name is null.
      **/
@@ -7007,6 +7414,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Oflush causes all buffers associated with an object to be immediately flushed to disk without
      * removing the data from the cache. object_id can be any named object associated with an HDF5 file
      * including a dataset, a group, or a committed datatype.
@@ -7015,11 +7424,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the object to be flushed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Oflush(long object_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Orefresh causes all buffers associated with an object to be cleared and immediately re-loaded with
      * updated contents from disk. This function essentially closes the object, evicts all metadata associated
      * with it from the cache, and then re-opens the object. The reopened object is automatically
@@ -7030,11 +7441,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the object to be refreshed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Orefresh(long object_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5O
+     *
      * H5Odisable_mdc_flushes corks an object, keeping dirty entries associated with the object in the
      * metadata cache.
      *
@@ -7042,7 +7455,10 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the object to be corked.
      **/
     public synchronized static native void H5Odisable_mdc_flushes(long object_id);
+
     /**
+     * @ingroup JH5O
+     *
      * H5Oenable_mdc_flushes uncorks an object, keeping dirty entries associated with the object in the
      * metadata cache.
      *
@@ -7050,7 +7466,10 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the object to be uncorked.
      **/
     public synchronized static native void H5Oenable_mdc_flushes(long object_id);
+
     /**
+     * @ingroup JH5O
+     *
      * H5Oare_mdc_flushes_disabled retrieve the object's "cork" status.
      *
      * @param object_id
@@ -7062,6 +7481,177 @@ public class H5 implements java.io.Serializable {
      **/
     public synchronized static native boolean H5Oare_mdc_flushes_disabled(long object_id);
 
+    /**
+     * @ingroup JH5O
+     *
+     * H5Oget_native_info retrieves the native HDF5-specific metadata for an HDF5 object specified by an
+     * identifier. Native HDF5-specific metadata includes things like object header information and object
+     * storage layout information.
+     *
+     * @param loc_id
+     *            IN: Identifier for target object
+     *
+     * @return object information
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF5 Library.
+     * @exception NullPointerException
+     *            name is null.
+     **/
+    public static H5O_native_info_t H5Oget_native_info(long loc_id)
+        throws HDF5LibraryException, NullPointerException
+    {
+        return H5Oget_native_info(loc_id, HDF5Constants.H5O_NATIVE_INFO_ALL);
+    }
+
+    /**
+     * @ingroup JH5O
+     *
+     * H5Oget_native_info retrieves the native HDF5-specific metadata for an HDF5 object specified by an
+     * identifier. Native HDF5-specific metadata includes things like object header information and object
+     * storage layout information.
+     *
+     * @param loc_id
+     *            IN: Identifier for target object
+     * @param fields
+     *            IN: Object fields to select
+     *
+     * @return object information
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF5 Library.
+     * @exception NullPointerException
+     *            name is null.
+     **/
+    public synchronized static native H5O_native_info_t H5Oget_native_info(long loc_id, int fields)
+        throws HDF5LibraryException, NullPointerException;
+
+    /**
+     * @ingroup JH5O
+     *
+     * H5Oget_native_info_by_name retrieves the native HDF5-specific metadata for an HDF5 object, identifying
+     * the object by location and relative name. Native HDF5-specific metadata includes things like object
+     * header information and object storage layout information.
+     *
+     * @param loc_id
+     *            IN: File or group identifier specifying location of group in which object is located
+     * @param name
+     *            IN: Relative name of group
+     * @param lapl_id
+     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
+     *                pass as H5P_DEFAULT.)
+     *
+     * @return object information
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF5 Library.
+     * @exception NullPointerException
+     *            name is null.
+     **/
+    public static H5O_native_info_t H5Oget_native_info_by_name(long loc_id, String name, long lapl_id)
+        throws HDF5LibraryException, NullPointerException
+    {
+        return H5Oget_native_info_by_name(loc_id, name, HDF5Constants.H5O_NATIVE_INFO_ALL, lapl_id);
+    }
+
+    /**
+     * @ingroup JH5O
+     *
+     * H5Oget_native_info_by_name retrieves the native HDF5-specific metadata for an HDF5 object, identifying
+     * the object by location and relative name. Native HDF5-specific metadata includes things like object
+     * header information and object storage layout information.
+     *
+     * @param loc_id
+     *            IN: File or group identifier specifying location of group in which object is located
+     * @param name
+     *            IN: Relative name of group
+     * @param fields
+     *            IN: Object fields to select
+     * @param lapl_id
+     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
+     *                pass as H5P_DEFAULT.)
+     *
+     * @return object information
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF5 Library.
+     * @exception NullPointerException
+     *            name is null.
+     **/
+    public synchronized static native H5O_native_info_t H5Oget_native_info_by_name(long loc_id, String name,
+                                                                                   int fields, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
+
+    /**
+     * @ingroup JH5O
+     *
+     * H5Oget_native_info_by_idx retrieves the native HDF5-specific metadata for an HDF5 object, identifying
+     * the object by an index position. Native HDF5-specific metadata includes things like object header
+     * information and object storage layout information.
+     *
+     * @param loc_id
+     *            IN: File or group identifier
+     * @param group_name
+     *            IN: Name of group, relative to loc_id, in which object is located
+     * @param idx_type
+     *            IN: Type of index by which objects are ordered
+     * @param order
+     *            IN: Order of iteration within index
+     * @param n
+     *            IN: Object to open
+     * @param lapl_id
+     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
+     *                pass as H5P_DEFAULT.)
+     *
+     * @return object information
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF5 Library.
+     * @exception NullPointerException
+     *            name is null.
+     **/
+    public static H5O_native_info_t H5Oget_native_info_by_idx(long loc_id, String group_name, int idx_type,
+                                                              int order, long n, long lapl_id)
+        throws HDF5LibraryException, NullPointerException
+    {
+        return H5Oget_native_info_by_idx(loc_id, group_name, idx_type, order, n,
+                                         HDF5Constants.H5O_NATIVE_INFO_ALL, lapl_id);
+    }
+
+    /**
+     * @ingroup JH5O
+     *
+     * H5Oget_native_info_by_idx retrieves the native HDF5-specific metadata for an HDF5 object, identifying
+     * the object by an index position. Native HDF5-specific metadata includes things like object header
+     * information and object storage layout information.
+     *
+     * @param loc_id
+     *            IN: File or group identifier
+     * @param group_name
+     *            IN: Name of group, relative to loc_id, in which object is located
+     * @param idx_type
+     *            IN: Type of index by which objects are ordered
+     * @param order
+     *            IN: Order of iteration within index
+     * @param n
+     *            IN: Object to open
+     * @param fields
+     *            IN: Object fields to select
+     * @param lapl_id
+     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
+     *                pass as H5P_DEFAULT.)
+     *
+     * @return object information
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF5 Library.
+     * @exception NullPointerException
+     *            name is null.
+     **/
+    public synchronized static native H5O_native_info_t H5Oget_native_info_by_idx(
+        long loc_id, String group_name, int idx_type, int order, long n, int fields, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
+
     // /////// unimplemented ////////
     // herr_t H5Otoken_cmp(hid_t loc_id, const H5O_token_t *token1, const H5O_token_t *token2,
     //            int *cmp_value);
@@ -7077,6 +7667,8 @@ public class H5 implements java.io.Serializable {
     // /////// Generic property list routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_class_name retrieves the name of a generic property list class
      *
      * @param plid
@@ -7084,11 +7676,13 @@ public class H5 implements java.io.Serializable {
      * @return name of a property list if successful; null if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native String H5Pget_class_name(long plid) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pcreate creates a new property as an instance of some property list class.
      *
      * @param type
@@ -7097,7 +7691,7 @@ public class H5 implements java.io.Serializable {
      * @return a property list identifier (plist) if successful; otherwise Fail (-1).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Pcreate(long type) throws HDF5LibraryException
     {
@@ -7113,6 +7707,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Pcreate(long type) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget retrieves a copy of the value for a property in a property list (support integer only)
      *
      * @param plid
@@ -7122,11 +7718,13 @@ public class H5 implements java.io.Serializable {
      * @return value for a property if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Pget(long plid, String name) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * Sets a property list value (support integer only)
      *
      * @param plid
@@ -7138,12 +7736,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Pset(long plid, String name, int value)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pexist determines whether a property exists within a property list or class
      *
      * @param plid
@@ -7154,11 +7754,13 @@ public class H5 implements java.io.Serializable {
      *     exist;
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native boolean H5Pexist(long plid, String name) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_size retrieves the size of a property's value in bytes
      *
      * @param plid
@@ -7168,11 +7770,13 @@ public class H5 implements java.io.Serializable {
      * @return size of a property's value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native long H5Pget_size(long plid, String name) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_nprops retrieves the number of properties in a property list or class
      *
      * @param plid
@@ -7180,11 +7784,13 @@ public class H5 implements java.io.Serializable {
      * @return number of properties if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native long H5Pget_nprops(long plid) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_class returns the property list class for the property list identified by the plist parameter.
      *
      * @param plist
@@ -7192,11 +7798,13 @@ public class H5 implements java.io.Serializable {
      * @return a property list class if successful. Otherwise returns H5P_ROOT (-1).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Pget_class(long plist) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_class_parent retrieves an identifier for the parent class of a property class
      *
      * @param plid
@@ -7204,11 +7812,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid parent class object identifier if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native long H5Pget_class_parent(long plid) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pequal determines if two property lists or classes are equal
      *
      * @param plid1
@@ -7219,11 +7829,13 @@ public class H5 implements java.io.Serializable {
      * @return positive value if equal; zero if unequal, a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Pequal(long plid1, long plid2) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pequal determines if two property lists or classes are equal
      *
      * @param plid1
@@ -7234,7 +7846,7 @@ public class H5 implements java.io.Serializable {
      * @return TRUE if equal, FALSE if unequal
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public static boolean H5P_equal(long plid1, long plid2) throws HDF5LibraryException
     {
@@ -7244,6 +7856,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pisa_class checks to determine whether a property list is a member of the specified class
      *
      * @param plist
@@ -7253,11 +7867,13 @@ public class H5 implements java.io.Serializable {
      * @return a positive value if equal; zero if unequal; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Pisa_class(long plist, long pclass) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pcopy_prop copies a property from one property list or class to another
      *
      * @param dst_id
@@ -7269,12 +7885,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Pcopy_prop(long dst_id, long src_id, String name)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Premove removes a property from a property list
      *
      * @param plid
@@ -7284,11 +7902,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Premove(long plid, String name) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Punregister removes a property from a property list class
      *
      * @param plid
@@ -7298,11 +7918,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native int H5Punregister(long plid, String name) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * Closes an existing property list class
      *
      * @param plid
@@ -7310,7 +7932,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public static int H5Pclose_class(long plid) throws HDF5LibraryException
     {
@@ -7326,6 +7948,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Pclose_class(long plid) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pclose terminates access to a property list.
      *
      * @param plist
@@ -7333,7 +7957,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Pclose(long plist) throws HDF5LibraryException
     {
@@ -7349,6 +7973,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Pclose(long plist) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pcopy copies an existing property list to create a new property list.
      *
      * @param plist
@@ -7357,7 +7983,7 @@ public class H5 implements java.io.Serializable {
      * @return a property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Pcopy(long plist) throws HDF5LibraryException
     {
@@ -7394,6 +8020,8 @@ public class H5 implements java.io.Serializable {
     // typedef herr_t (*H5P_iterate_t)(hid_t id, const char *name, void *iter_data);
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pcreate_class_nocb creates an new property class with no callback functions.
      *
      * @param parent_class
@@ -7404,7 +8032,7 @@ public class H5 implements java.io.Serializable {
      * @return a property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Pcreate_class_nocb(long parent_class, String name) throws HDF5LibraryException
     {
@@ -7440,6 +8068,8 @@ public class H5 implements java.io.Serializable {
     //            H5P_cls_close_func_t close_data) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pregister2_nocb registers a property list with no callback functions.
      *
      * @param plist_class
@@ -7452,7 +8082,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Default value of the property
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *                - Error from the HDF5 Library.
      **/
     public synchronized static native void H5Pregister2_nocb(long plist_class, String name, long size,
                                                              byte[] def_value) throws HDF5LibraryException;
@@ -7463,6 +8093,8 @@ public class H5 implements java.io.Serializable {
     //          H5P_prp_compare_func_cb prp_cmp, H5P_prp_close_func_cb prp_close) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pinsert2_nocb inserts a property list with no callback functions.
      *
      * @param plist
@@ -7475,7 +8107,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Default value of the property
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Pinsert2_nocb(long plist, String name, long size, byte[] value)
         throws HDF5LibraryException;
@@ -7486,6 +8118,8 @@ public class H5 implements java.io.Serializable {
     //      H5P_prp_close_func_cb prp_close) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Piterate iterates over the properties in a property list or class
      *
      * @param  plist
@@ -7501,7 +8135,7 @@ public class H5 implements java.io.Serializable {
      *            zero if all properties have been processed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      *
@@ -7512,6 +8146,8 @@ public class H5 implements java.io.Serializable {
     // /////// Object creation property list (OCPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_attr_phase_change retrieves attribute storage phase change thresholds.
      *
      * @param ocpl_id
@@ -7527,7 +8163,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      *
@@ -7536,6 +8172,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_attr_phase_change sets threshold values for attribute storage on an object. These
      *      thresholds determine the point at which attribute storage changes
      *      from compact storage (i.e., storage in the object header)
@@ -7549,7 +8187,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Minimum number of attributes to be stored in dense storage (Default: 6)
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_attr_phase_change(long ocpl_id, int max_compact,
@@ -7557,6 +8195,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_attr_creation_order retrieves the settings for tracking and indexing attribute creation order on
      * an object.
      *
@@ -7566,13 +8206,15 @@ public class H5 implements java.io.Serializable {
      * @return Flags specifying whether to track and index attribute creation order
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_attr_creation_order(long ocpl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_attr_creation_order sets flags specifying whether to track and index attribute creation order on
      * an object.
      *
@@ -7584,13 +8226,15 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_attr_creation_order(long ocpl_id, int crt_order_flags)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_obj_track_times queries the object creation property list, ocpl_id, to determine whether object
      * times are being recorded.
      *
@@ -7600,13 +8244,15 @@ public class H5 implements java.io.Serializable {
      * @return TRUE or FALSE, specifying whether object times are being recorded
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native boolean H5Pget_obj_track_times(long ocpl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_obj_track_times sets a property in the object creation property list, ocpl_id, that governs the
      * recording of times associated with an object.
      *
@@ -7617,13 +8263,15 @@ public class H5 implements java.io.Serializable {
      *            IN: TRUE or FALSE, specifying whether object times are to be tracked
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_obj_track_times(long ocpl_id, boolean track_times)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pmodify_filter modifies the specified FILTER in the transient or permanent output filter pipeline
      *              depending on whether PLIST is a dataset creation or dataset
      *              transfer property list.  The FLAGS argument specifies certain
@@ -7663,7 +8311,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name or an array is null.
      *
@@ -7673,6 +8321,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_filter adds the specified filter and corresponding properties to the end of an output filter
      * pipeline.
      *
@@ -7690,12 +8340,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_filter(long plist, int filter, int flags, long cd_nelmts,
                                                         int[] cd_values) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_nfilters returns the number of filters defined in the filter pipeline associated with the
      * property list plist.
      *
@@ -7705,11 +8357,13 @@ public class H5 implements java.io.Serializable {
      * @return the number of filters in the pipeline if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pget_nfilters(long plist) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_filter returns information about a filter, specified by its filter number, in a filter pipeline,
      * specified by the property list with which it is associated.
      *
@@ -7738,7 +8392,7 @@ public class H5 implements java.io.Serializable {
      * @exception ArrayStoreException
      *            Fatal error on Copyback
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name or an array is null.
      *
@@ -7752,6 +8406,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_filter2 returns information about a filter, specified by its filter number, in a filter
      * pipeline, specified by the property list with which it is associated.
      *
@@ -7766,6 +8422,8 @@ public class H5 implements java.io.Serializable {
                NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_filter_by_id returns information about the filter specified in filter_id, a filter identifier.
      * plist_id must be a dataset or group creation property list and filter_id must be in the associated
      * filter pipeline. The filter_id and flags parameters are used in the same manner as described in the
@@ -7798,7 +8456,7 @@ public class H5 implements java.io.Serializable {
      * @return the filter identification number if successful. Otherwise returns H5Z_FILTER_ERROR (-1).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception ArrayIndexOutOfBoundsException
      *            Fatal error on Copyback
      * @exception ArrayStoreException
@@ -7816,6 +8474,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_filter_by_id2 returns information about a filter, specified by its filter id, in a filter
      * pipeline, specified by the property list with which it is associated.
      *
@@ -7839,7 +8499,7 @@ public class H5 implements java.io.Serializable {
      * @return the filter identification number if successful. Otherwise returns H5Z_FILTER_ERROR (-1).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name or an array is null.
      *
@@ -7850,6 +8510,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pall_filters_avail query to verify that all the filters set
      *                      in the dataset creation property list are available currently.
      *
@@ -7861,12 +8523,14 @@ public class H5 implements java.io.Serializable {
      *            FALSE if one or more filters not currently available.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Pall_filters_avail(long dcpl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Premove_filter deletes a filter from the dataset creation property list;
      *                  deletes all filters if filter is H5Z_FILTER_NONE
      *
@@ -7878,12 +8542,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Premove_filter(long obj_id, long filter)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_deflate sets the compression method for a dataset.
      *
      * @param plist
@@ -7894,11 +8560,13 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_deflate(long plist, int level) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fletcher32 sets Fletcher32 checksum of EDC for a dataset creation
      *                   property list or group creation property list.
      *
@@ -7908,7 +8576,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_fletcher32(long plist)
         throws HDF5LibraryException, NullPointerException;
@@ -7916,6 +8584,8 @@ public class H5 implements java.io.Serializable {
     // /////// File creation property list (FCPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_userblock retrieves the size of a user block in a file creation property list.
      *
      * @param plist
@@ -7926,7 +8596,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      **/
@@ -7934,6 +8604,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_userblock sets the user block size of a file creation property list.
      *
      * @param plist
@@ -7944,11 +8616,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_userblock(long plist, long size) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_sizes retrieves the size of the offsets and lengths used in an HDF5 file. This function is only
      * valid for file creation property lists.
      *
@@ -7964,7 +8638,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value with the sizes initialized; if successful;
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      * @exception IllegalArgumentException
@@ -7974,6 +8648,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_sizes sets the byte size of the offsets and lengths used to address objects in an HDF5 file.
      *
      * @param plist
@@ -7986,12 +8662,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_sizes(long plist, int sizeof_addr, int sizeof_size)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_sym_k retrieves the size of the symbol table B-tree 1/2 rank and the symbol table leaf node 1/2
      * size.
      *
@@ -8008,7 +8686,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      * @exception IllegalArgumentException
@@ -8018,6 +8696,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_sym_k sets the size of parameters used to control the symbol table nodes.
      *
      * @param plist
@@ -8030,12 +8710,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_sym_k(long plist, int ik, int lk)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_istore_k queries the 1/2 rank of an indexed storage B-tree.
      *
      * @param plist
@@ -8046,7 +8728,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            ik array is null.
      **/
@@ -8054,6 +8736,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_istore_k sets the size of the parameter used to control the B-trees for indexing chunked
      * datasets.
      *
@@ -8065,11 +8749,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_istore_k(long plist, int ik) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_shared_mesg_nindexes retrieves number of shared object header message indexes in file creation
      * property list.
      *
@@ -8080,13 +8766,15 @@ public class H5 implements java.io.Serializable {
      *         this property list
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_shared_mesg_nindexes(long fcpl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_shared_mesg_nindexes sets the number of shared object header message indexes in the specified
      * file creation property list.
      *
@@ -8099,7 +8787,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid value of nindexes
      *
@@ -8108,6 +8796,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_shared_mesg_index Retrieves the configuration settings for a shared message index.
      *
      * @param fcpl_id
@@ -8125,7 +8815,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            mesg_info is null.
      * @exception IllegalArgumentException
@@ -8137,6 +8827,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_shared_mesg_index Configures the specified shared object header message index
      *
      * @param fcpl_id
@@ -8151,7 +8843,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid value of nindexes
      *
@@ -8161,6 +8853,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_shared_mesg_phase_change retrieves shared object header message phase change information.
      *
      * @param fcpl_id
@@ -8177,7 +8871,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      *
@@ -8186,6 +8880,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_shared_mesg_phase_change sets shared object header message storage phase change thresholds.
      *
      * @param fcpl_id
@@ -8200,7 +8896,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_list and min_btree.
      *
@@ -8210,6 +8906,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_file_space_strategy sets the file space management strategy for the file associated with fcpl_id
      * to strategy. There are four strategies that applications can select and they are described in the
      * Parameters section.
@@ -8236,7 +8934,7 @@ public class H5 implements java.io.Serializable {
      *                is not to be modified.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_list and min_btree.
      *
@@ -8246,6 +8944,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_file_space_strategy provides the means for applications to manage the HDF5 file's file space
      * strategy for their specific needs.
      *
@@ -8259,7 +8959,7 @@ public class H5 implements java.io.Serializable {
      * @return the current free-space strategy.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_list and min_btree.
      *
@@ -8269,6 +8969,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_file_space_strategy_persist provides the means for applications to manage the HDF5 file's file
      * space strategy for their specific needs.
      *
@@ -8278,7 +8980,7 @@ public class H5 implements java.io.Serializable {
      * @return the current free-space persistence.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_list and min_btree.
      *
@@ -8287,6 +8989,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_file_space_strategy_threshold provides the means for applications to manage the HDF5 file's file
      * space strategy for their specific needs.
      *
@@ -8296,7 +9000,7 @@ public class H5 implements java.io.Serializable {
      * @return the current free-space section threshold.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_list and min_btree.
      *
@@ -8305,6 +9009,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_file_space_page_size retrieves the file space page size for aggregating small metadata or raw
      * data.
      *
@@ -8315,7 +9021,7 @@ public class H5 implements java.io.Serializable {
      *
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_list and min_btree.
      *
@@ -8324,6 +9030,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_file_space_page_size Sets the file space page size for paged aggregation.
      *
      * @param fcpl_id
@@ -8332,7 +9040,7 @@ public class H5 implements java.io.Serializable {
      * @return the current file space page size.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_list and min_btree.
      *
@@ -8343,6 +9051,8 @@ public class H5 implements java.io.Serializable {
     // /////// File access property list (FAPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_alignment retrieves the current settings for alignment properties from a file access property
      * list.
      *
@@ -8358,7 +9068,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            alignment array is null.
      * @exception IllegalArgumentException
@@ -8368,6 +9078,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_alignment sets the alignment properties of a file access property list so that any file object
      * &gt;= THRESHOLD bytes will be aligned on an address which is a multiple of ALIGNMENT.
      *
@@ -8381,12 +9093,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_alignment(long plist, long threshold, long alignment)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_driver returns the identifier of the low-level file driver associated with the file access
      * property list or data transfer property list plid.
      *
@@ -8395,11 +9109,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid low-level driver identifier if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      */
     public synchronized static native long H5Pget_driver(long plid) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_family_offset gets offset for family driver.
      *
      * @param fapl_id
@@ -8408,12 +9124,14 @@ public class H5 implements java.io.Serializable {
      * @return the offset.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native long H5Pget_family_offset(long fapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_family_offset sets the offset for family driver.
      *
      * @param fapl_id
@@ -8424,13 +9142,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_family_offset(long fapl_id, long offset)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * Retrieves the maximum possible number of elements in the meta data cache and the maximum possible
      * number of bytes and the RDCC_W0 value in the raw data chunk cache.
      *
@@ -8448,7 +9168,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an array is null.
      **/
@@ -8457,6 +9177,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_cache sets the number of elements (objects) in the meta data cache and the total number of bytes
      * in the raw data chunk cache.
      *
@@ -8474,13 +9196,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_cache(long plist, int mdc_nelmts, long rdcc_nelmts,
                                                        long rdcc_nbytes, double rdcc_w0)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_mdc_config gets the initial metadata cache configuration contained in a file access property
      * list. This configuration is used when the file is opened.
      *
@@ -8490,12 +9214,14 @@ public class H5 implements java.io.Serializable {
      * @return A buffer(H5AC_cache_config_t) for the current metadata cache configuration information
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native H5AC_cache_config_t H5Pget_mdc_config(long plist_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_mdc_config sets the initial metadata cache configuration contained in a file access property
      * list and loads it into the instance of H5AC_cache_config_t pointed to by the config_ptr parameter. This
      * configuration is used when the file is opened.
@@ -8506,12 +9232,14 @@ public class H5 implements java.io.Serializable {
      *            IN: H5AC_cache_config_t, the initial metadata cache configuration.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Pset_mdc_config(long plist_id, H5AC_cache_config_t config_ptr)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_gc_references Returns the current setting for the garbage collection references property from a
      * file access property list.
      *
@@ -8521,11 +9249,13 @@ public class H5 implements java.io.Serializable {
      * @return GC is on (true) or off (false)
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Pget_gc_references(long fapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_gc_references Sets the flag for garbage collecting references for the file. Default value for
      * garbage collecting references is off.
      *
@@ -8537,12 +9267,14 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_gc_references(long fapl_id, boolean gc_ref)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fclose_degree returns the degree for the file close behavior for a file access
      * property list.
      *
@@ -8552,12 +9284,14 @@ public class H5 implements java.io.Serializable {
      * @return the degree for the file close behavior
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pget_fclose_degree(long fapl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fclose_degree sets the degree for the file close behavior.
      *
      * @param fapl_id
@@ -8568,12 +9302,14 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_fclose_degree(long fapl_id, int degree)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_meta_block_size the current metadata block size setting.
      *
      * @param fapl_id
@@ -8582,12 +9318,14 @@ public class H5 implements java.io.Serializable {
      * @return the minimum size, in bytes, of metadata block allocations.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native long H5Pget_meta_block_size(long fapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_meta_block_size sets the minimum metadata block size.
      *
      * @param fapl_id
@@ -8596,13 +9334,15 @@ public class H5 implements java.io.Serializable {
      *            IN: Minimum size, in bytes, of metadata block allocations.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_meta_block_size(long fapl_id, long size)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_sieve_buf_size retrieves the current settings for the data sieve buffer size
      * property from a file access property list.
      *
@@ -8612,11 +9352,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Pget_sieve_buf_size(long fapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_sieve_buf_size Sets the maximum size of the data seive buffer used for file
      *      drivers which are capable of using data sieving.  The data sieve
      *      buffer is used when performing I/O on datasets in the file.  Using a
@@ -8634,12 +9376,14 @@ public class H5 implements java.io.Serializable {
      *            IN: maximum size of the data seive buffer.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Pset_sieve_buf_size(long fapl_id, long size)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_small_data_block_size retrieves the size of a block of small data in a file creation property
      * list.
      *
@@ -8649,12 +9393,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Pget_small_data_block_size(long plist)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_small_data_block_size reserves blocks of size bytes for the contiguous storage of the raw data
      * portion of small datasets.
      *
@@ -8666,12 +9412,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_small_data_block_size(long plist, long size)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_libver_bounds retrieves the lower and upper bounds on the HDF5 Library versions that indirectly
      * determine the object formats versions used when creating objects in the file.
      *
@@ -8688,7 +9436,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      *
@@ -8697,6 +9445,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_libver_bounds Sets bounds on library versions, and indirectly format versions, to be used when
      * creating objects
      *
@@ -8711,7 +9461,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Argument is Illegal
      *
@@ -8720,6 +9470,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_elink_file_cache_size retrieves the size of the external link open file cache.
      *
      * @param fapl_id
@@ -8728,13 +9480,15 @@ public class H5 implements java.io.Serializable {
      * @return External link open file cache size in number of files.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_elink_file_cache_size(long fapl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_elink_file_cache_size sets the number of files that can be held open in an external link open
      * file cache.
      *
@@ -8744,13 +9498,15 @@ public class H5 implements java.io.Serializable {
      *            IN: External link open file cache size in number of files.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_elink_file_cache_size(long fapl_id, int efc_size)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_mdc_log_options sets metadata cache logging options.
      *
      * @param fapl_id
@@ -8763,7 +9519,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Whether the logging begins as soon as the file is opened or created.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            location is null.
      *
@@ -8773,6 +9529,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_mdc_log_options gets metadata cache logging options.
      *
      * @param fapl_id
@@ -8786,13 +9544,15 @@ public class H5 implements java.io.Serializable {
      * @return the location of log in UTF-8/ASCII (file path/name) (On Windows, this must be ASCII).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native String H5Pget_mdc_log_options(long fapl_id, boolean[] mdc_log_options)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_metadata_read_attempts retrieves the number of read attempts that is set in the file access
      * property list plist_id.
      *
@@ -8802,13 +9562,15 @@ public class H5 implements java.io.Serializable {
      * @return The number of read attempts.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native long H5Pget_metadata_read_attempts(long plist_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_metadata_read_attempts sets the number of reads that the library will try when reading
      * checksummed metadata in an HDF5 file opened with SWMR access. When reading such metadata, the library
      * will compare the checksum computed for the metadata just read with the checksum stored within the piece
@@ -8823,13 +9585,15 @@ public class H5 implements java.io.Serializable {
      *            IN: The number of read attempts which is a value greater than 0.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_metadata_read_attempts(long plist_id, long attempts)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_evict_on_close retrieves the file access property list setting that determines whether an HDF5
      * object will be evicted from the library's metadata cache when it is closed.
      *
@@ -8839,12 +9603,14 @@ public class H5 implements java.io.Serializable {
      * @return indication if the object will be evicted on close.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native boolean H5Pget_evict_on_close(long fapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_evict_on_close controls the library's behavior of evicting metadata associated with a closed
      * object.
      *
@@ -8854,13 +9620,15 @@ public class H5 implements java.io.Serializable {
      *            IN: Whether the HDF5 object should be evicted on close.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_evict_on_close(long fapl_id, boolean evict_on_close)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_use_file_locking retrieves whether we are using file locking.
      *
      * @param fapl_id
@@ -8869,13 +9637,15 @@ public class H5 implements java.io.Serializable {
      * @return indication if file locking is used.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native boolean H5Pget_use_file_locking(long fapl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_use_file_locking retrieves whether we ignore file locks when they are disabled.
      *
      * @param fapl_id
@@ -8884,13 +9654,15 @@ public class H5 implements java.io.Serializable {
      * @return indication if file locking is ignored.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native boolean H5Pget_ignore_disabled_file_locking(long fapl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_file_locking sets parameters related to file locking.
      *
      * @param fapl_id
@@ -8904,7 +9676,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Whether file locking will be ignored when disabled on a file system (useful for Lustre).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_file_locking(long fapl_id, boolean use_file_locking,
@@ -8919,6 +9691,8 @@ public class H5 implements java.io.Serializable {
     // Dataset creation property list (DCPL) routines //
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_layout returns the layout of the raw data for a dataset.
      *
      * @param plist
@@ -8928,11 +9702,13 @@ public class H5 implements java.io.Serializable {
      *         H5D_LAYOUT_ERROR (-1).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pget_layout(long plist) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_layout sets the type of storage used store the raw data for a dataset.
      *
      * @param plist
@@ -8943,11 +9719,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_layout(long plist, int layout) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_chunk retrieves the size of chunks for the raw data of a chunked layout dataset.
      *
      * @param plist
@@ -8960,7 +9738,7 @@ public class H5 implements java.io.Serializable {
      * @return chunk dimensionality successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dims array is null.
      * @exception IllegalArgumentException
@@ -8970,6 +9748,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_chunk sets the size of the chunks used to store a chunked layout dataset.
      *
      * @param plist
@@ -8982,7 +9762,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dims array is null.
      * @exception IllegalArgumentException
@@ -8992,6 +9772,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_chunk sets the size of the chunks used to store a chunked layout dataset.
      *
      * @param plist
@@ -9004,7 +9786,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5Exception
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dims array is null.
      * @exception IllegalArgumentException
@@ -9028,6 +9810,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_virtual maps elements of the virtual dataset (VDS) described by the
      * virtual dataspace identifier vspace_id to the elements of the source dataset
      * described by the source dataset dataspace identifier src_space_id. The source
@@ -9051,7 +9835,7 @@ public class H5 implements java.io.Serializable {
      *                selection.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an name string is null.
      * @exception IllegalArgumentException
@@ -9062,6 +9846,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_count gets the number of mappings for a virtual dataset that has the creation property
      * list specified by dcpl_id.
      *
@@ -9071,7 +9857,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative number of mappings if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            An id is &lt;=0
      **/
@@ -9079,6 +9865,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_vspace takes the dataset creation property list for the virtual dataset, dcpl_id, and
      * the mapping index, index, and returns a dataspace identifier for the selection within the virtual
      * dataset used in the mapping.
@@ -9091,7 +9879,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            An id is &lt;=0
      **/
@@ -9099,6 +9887,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_srcspace takes the dataset creation property list for the virtual dataset, dcpl_id, and
      * the mapping index, index, and returns a dataspace identifier for the selection within the source
      * dataset used in the mapping.
@@ -9111,7 +9901,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            An id is &lt;=0
      **/
@@ -9119,6 +9909,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_filename takes the dataset creation property list for the virtual dataset, dcpl_id, the
      * mapping index, index, the size of the filename for a source dataset, size, and retrieves the name of
      * the file for a source dataset used in the mapping.
@@ -9131,7 +9923,7 @@ public class H5 implements java.io.Serializable {
      * @return the name of the file containing the source dataset if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            An id is &lt;=0
      **/
@@ -9139,6 +9931,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_dsetname takes the dataset creation property list for the virtual dataset, dcpl_id, the
      * mapping index, index, the size of the dataset name for a source dataset, size, and retrieves the name
      * of the source dataset used in the mapping.
@@ -9151,7 +9945,7 @@ public class H5 implements java.io.Serializable {
      * @return the name of the source dataset if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            An id is &lt;=0
      **/
@@ -9168,7 +9962,7 @@ public class H5 implements java.io.Serializable {
     //     * @return VDS link open file cache size in number of files.
     //     *
     //     * @exception HDF5LibraryException
-    //     *            Error from the HDF-5 Library.
+    //     *            Error from the HDF5 Library.
     //     *
     //     **/
     //    public synchronized static native int H5Pget_vds_file_cache_size(long fapl_id) throws
@@ -9184,13 +9978,15 @@ public class H5 implements java.io.Serializable {
     //     *            IN: VDS link open file cache size in number of files.
     //     *
     //     * @exception HDF5LibraryException
-    //     *            Error from the HDF-5 Library.
+    //     *            Error from the HDF5 Library.
     //     *
     //     **/
     //    public synchronized static native void H5Pset_vds_file_cache_size(long fapl_id, int efc_size)
     //            throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_external returns information about an external file.
      *
      * @param plist
@@ -9217,7 +10013,7 @@ public class H5 implements java.io.Serializable {
      * @exception ArrayStoreException
      *            Fatal error on Copyback
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name or size is null.
      * @exception IllegalArgumentException
@@ -9230,6 +10026,8 @@ public class H5 implements java.io.Serializable {
                NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_external adds an external file to the list of external files.
      *
      * @param plist
@@ -9245,7 +10043,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -9253,6 +10051,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_external_count returns the number of external files for the specified dataset.
      *
      * @param plist
@@ -9261,11 +10061,13 @@ public class H5 implements java.io.Serializable {
      * @return the number of external files if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pget_external_count(long plist) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_szip Sets up the use of the szip filter.
      *
      * @param plist
@@ -9278,13 +10080,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_szip(long plist, int options_mask, int pixels_per_block)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_shuffle Sets up the use of the shuffle filter.
      *
      * @param plist_id
@@ -9293,13 +10097,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_shuffle(long plist_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_nbit Sets up the use of the N-Bit filter.
      *
      * @param plist_id
@@ -9308,12 +10114,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_nbit(long plist_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_scaleoffset sets the Scale-Offset filter for a dataset.
      *
      * @param plist_id
@@ -9326,7 +10134,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid arguments
      *
@@ -9335,6 +10143,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fill_value queries the fill value property of a dataset creation property list.
      *
      * @param plist_id
@@ -9353,6 +10163,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5Exception;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fill_value queries the fill value property of a dataset creation property list.
      *
      * @param plist_id
@@ -9381,6 +10193,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fill_value sets the fill value for a dataset creation property list.
      *
      * @param plist_id
@@ -9399,6 +10213,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5Exception;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fill_value sets the fill value for a dataset creation property list.
      *
      * @param plist_id
@@ -9427,6 +10243,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fill_value checks if the fill value is defined for a dataset creation property list.
      *
      * @param plist_id
@@ -9447,6 +10265,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_alloc_time Gets space allocation time for dataset during creation.
      *
      * @param plist_id
@@ -9457,13 +10277,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_alloc_time(long plist_id, int[] alloc_time)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_alloc_time Sets space allocation time for dataset during creation.
      *
      * @param plist_id
@@ -9474,13 +10296,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_alloc_time(long plist_id, int alloc_time)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fill_time Gets fill value writing time.
      *
      * @param plist_id
@@ -9491,13 +10315,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_fill_time(long plist_id, int[] fill_time)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fill_time Sets the fill value writing time.
      *
      * @param plist_id
@@ -9508,13 +10334,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fill_time(long plist_id, int fill_time)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_chunk_opts Sets the edge chunk option in a dataset creation property list.
      *
      * @param dcpl_id
@@ -9525,12 +10353,14 @@ public class H5 implements java.io.Serializable {
      *                0 - Disables option; partial edge chunks will be compressed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library
+     *            Error from the HDF5 Library
      **/
     public synchronized static native void H5Pset_chunk_opts(long dcpl_id, int opts)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_chunk_opts retrieves the edge chunk option setting stored in the dataset creation property list
      *
      * @param dcpl_id
@@ -9539,12 +10369,14 @@ public class H5 implements java.io.Serializable {
      * @return The edge chunk option setting.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library
+     *            Error from the HDF5 Library
      *
    */
     public synchronized static native int H5Pget_chunk_opts(long dcpl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_dset_no_attrs_hint accesses the flag for whether or not datasets created by the given dcpl
      * will be created with a "minimized" object header.
      *
@@ -9554,12 +10386,14 @@ public class H5 implements java.io.Serializable {
      * @return true if the given dcpl is set to create minimized dataset object headers, false if not.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Pget_dset_no_attrs_hint(long dcpl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_dset_no_attrs_hint sets the dcpl to minimize (or explicitly to not minimized) dataset object
      * headers upon creation.
      *
@@ -9570,7 +10404,7 @@ public class H5 implements java.io.Serializable {
      *            IN: the minimize hint setting
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Pset_dset_no_attrs_hint(long dcpl_id, boolean minimize)
         throws HDF5LibraryException;
@@ -9578,6 +10412,8 @@ public class H5 implements java.io.Serializable {
     // /////// Dataset access property list (DAPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * Retrieves the maximum possible number of elements in the meta data cache and the maximum possible
      * number of bytes and the RDCC_W0 value in the raw data chunk cache on a per-datset basis.
      *
@@ -9591,7 +10427,7 @@ public class H5 implements java.io.Serializable {
      *            IN/OUT: Preemption policy.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an array is null.
      **/
@@ -9600,6 +10436,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_chunk_cache sets the number of elements (objects) in the meta data cache and the total number of
      * bytes in the raw data chunk cache on a per-datset basis.
      *
@@ -9613,13 +10451,15 @@ public class H5 implements java.io.Serializable {
      *            IN: Preemption policy.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Pset_chunk_cache(long dapl_id, long rdcc_nslots,
                                                               long rdcc_nbytes, double rdcc_w0)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_virtual_view takes the access property list for the virtual dataset, dapl_id, and the flag,
      * view, and sets the VDS view according to the flag value.
      *
@@ -9629,12 +10469,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Flag specifying the extent of the data to be included in the view.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library
+     *            Error from the HDF5 Library
      **/
     public synchronized static native void H5Pset_virtual_view(long dapl_id, int view)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_view takes the virtual dataset access property list, dapl_id, and retrieves the flag,
      * view, set by the H5Pset_virtual_view call.
      *
@@ -9644,12 +10486,14 @@ public class H5 implements java.io.Serializable {
      * @return The flag specifying the view of the virtual dataset.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library
+     *            Error from the HDF5 Library
      *
    */
     public synchronized static native int H5Pget_virtual_view(long dapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_virtual_printf_gap sets the access property list for the virtual dataset, dapl_id, to instruct
      * the library to stop looking for the mapped data stored in the files and/or datasets with the
      * printf-style names after not finding gap_size files and/or datasets. The found source files and
@@ -9662,12 +10506,14 @@ public class H5 implements java.io.Serializable {
      *                the extent of an unlimited virtual dataset with printf-style mappings.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library
+     *            Error from the HDF5 Library
      **/
     public synchronized static native void H5Pset_virtual_printf_gap(long dapl_id, long gap_size)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_printf_gap returns the maximum number of missing printf-style files and/or datasets for
      * determining the extent of an unlimited virtual dataaset, gap_size, using the access property list for
      * the virtual dataset, dapl_id.
@@ -9679,13 +10525,15 @@ public class H5 implements java.io.Serializable {
      *            the extent of an unlimited virtual dataset with printf-style mappings.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library
+     *            Error from the HDF5 Library
      *
    */
     public synchronized static native long H5Pget_virtual_printf_gap(long dapl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_virtual_prefix Retrieves prefix applied to virtual file paths.
      *
      * @param dapl_id
@@ -9694,12 +10542,14 @@ public class H5 implements java.io.Serializable {
      * @return the prefix to be applied to virtual file paths.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native String H5Pget_virtual_prefix(long dapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_virtual_prefix Sets prefix to be applied to virtual file paths.
      *
      * @param dapl_id
@@ -9708,7 +10558,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Prefix to be applied to virtual file paths
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            prefix is null.
      *
@@ -9717,6 +10567,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_efile_prefix Retrieves prefix applied to external file paths.
      *
      * @param dapl_id
@@ -9725,12 +10577,14 @@ public class H5 implements java.io.Serializable {
      * @return the prefix to be applied to external file paths.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native String H5Pget_efile_prefix(long dapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_efile_prefix Sets prefix to be applied to external file paths.
      *
      * @param dapl_id
@@ -9739,7 +10593,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Prefix to be applied to external file paths
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            prefix is null.
      *
@@ -9756,6 +10610,8 @@ public class H5 implements java.io.Serializable {
     // /////// Dataset xfer property list (DXPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_data_transform retrieves the data transform expression previously set in the dataset transfer
      * property list plist_id by H5Pset_data_transform.
      *
@@ -9771,7 +10627,7 @@ public class H5 implements java.io.Serializable {
      *
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Size is &lt;= 0.
      *
@@ -9781,6 +10637,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_data_transform sets a data transform expression
      *
      * @param plist_id
@@ -9791,7 +10649,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative valule if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            expression is null.
      *
@@ -9800,7 +10658,9 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
-     * HH5Pget_buffer gets type conversion and background buffers. Returns buffer size, in bytes, if
+     * @ingroup JH5P
+     *
+     * H5Pget_buffer gets type conversion and background buffers. Returns buffer size, in bytes, if
      * successful; otherwise 0 on failure.
      *
      * @param plist
@@ -9813,7 +10673,7 @@ public class H5 implements java.io.Serializable {
      * @return buffer size, in bytes, if successful; otherwise 0 on failure
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            plist is invalid.
      **/
@@ -9821,6 +10681,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_buffer_size gets type conversion and background buffer size, in bytes, if successful;
      * otherwise 0 on failure.
      *
@@ -9830,7 +10692,7 @@ public class H5 implements java.io.Serializable {
      * @return buffer size, in bytes, if successful; otherwise 0 on failure
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            plist is invalid.
      **/
@@ -9838,6 +10700,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_buffer sets type conversion and background buffers. status to TRUE or FALSE.
      *
      * Given a dataset transfer property list, H5Pset_buffer sets the maximum size for the type conversion
@@ -9858,7 +10722,7 @@ public class H5 implements java.io.Serializable {
      *            Size, in bytes, of the type conversion and background buffers.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            plist is invalid.
      **/
@@ -9866,6 +10730,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_edc_check gets the error-detecting algorithm in use.
      *
      * @param plist
@@ -9874,11 +10740,13 @@ public class H5 implements java.io.Serializable {
      * @return the error-detecting algorithm
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pget_edc_check(long plist) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_edc_check sets the error-detecting algorithm.
      *
      * @param plist
@@ -9889,11 +10757,13 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if succeed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_edc_check(long plist, int check) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_btree_ratio Get the B-tree split ratios for a dataset transfer property list.
      *
      * @param plist_id
@@ -9908,7 +10778,7 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if succeed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      **/
@@ -9917,6 +10787,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_btree_ratio Sets B-tree split ratios for a dataset transfer property list. The split ratios
      * determine what percent of children go in the first node when a node splits.
      *
@@ -9932,12 +10804,14 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if succeed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Pset_btree_ratios(long plist_id, double left, double middle,
                                                               double right) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_hyper_vector_size reads values previously set with H5Pset_hyper_vector_size.
      *
      * @param dxpl_id
@@ -9948,13 +10822,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_hyper_vector_size(long dxpl_id, long[] vector_size)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_hyper_vector_size sets the number of
      *              "I/O vectors" (offset and length pairs) which are to be
      *              accumulated in memory before being issued to the lower levels
@@ -9974,7 +10850,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_hyper_vector_size(long dxpl_id, long vector_size)
@@ -9983,6 +10859,8 @@ public class H5 implements java.io.Serializable {
     // /////// Link creation property list (LCPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_create_intermediate_group determines whether property is set to enable creating missing
      * intermediate groups.
      *
@@ -9992,13 +10870,15 @@ public class H5 implements java.io.Serializable {
      * @return Boolean true or false
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native boolean H5Pget_create_intermediate_group(long lcpl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_create_intermediate_group specifies in property list whether to create missing intermediate
      * groups
      *
@@ -10010,7 +10890,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative valule if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_create_intermediate_group(long lcpl_id,
@@ -10020,6 +10900,8 @@ public class H5 implements java.io.Serializable {
     // /////// Group creation property list (GCPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_local_heap_size_hint Retrieves the anticipated size of the local heap for original-style groups.
      *
      * @param gcpl_id
@@ -10028,13 +10910,15 @@ public class H5 implements java.io.Serializable {
      * @return size_hint, the anticipated size of local heap
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native long H5Pget_local_heap_size_hint(long gcpl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_local_heap_size_hint Specifies the anticipated maximum size of a local heap.
      *
      * @param gcpl_id
@@ -10045,13 +10929,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_local_heap_size_hint(long gcpl_id, long size_hint)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_link_phase_change Queries the settings for conversion between compact and dense groups.
      *
      * @param gcpl_id
@@ -10068,7 +10954,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            size is null.
      *
@@ -10077,6 +10963,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_link_phase_change Sets the parameters for conversion between compact and dense groups.
      *
      * @param gcpl_id
@@ -10089,7 +10977,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values of max_compact and min_dense.
      *
@@ -10099,6 +10987,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_est_link_info Queries data required to estimate required local heap or object header size.
      *
      * @param gcpl_id
@@ -10115,7 +11005,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            link_info is null.
      *
@@ -10124,6 +11014,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_est_link_info Sets estimated number of links and length of link names in a group.
      *
      * @param gcpl_id
@@ -10136,7 +11028,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid values to est_num_entries and est_name_len.
      *
@@ -10146,6 +11038,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_link_creation_order queries the group creation property list, gcpl_id, and returns a flag
      * indicating whether link creation order is tracked and/or indexed in a group.
      *
@@ -10155,13 +11049,15 @@ public class H5 implements java.io.Serializable {
      * @return crt_order_flags -Creation order flag(s)
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_link_creation_order(long gcpl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_link_creation_order Sets flags in a group creation property list, gcpl_id, for tracking and/or
      * indexing links on creation order.
      *
@@ -10174,7 +11070,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_link_creation_order(long gcpl_id, int crt_order_flags)
@@ -10183,6 +11079,8 @@ public class H5 implements java.io.Serializable {
     // /////// String creation property list (STRCPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_char_encoding gets the character encoding of the string.
      *
      * @param plist_id
@@ -10191,12 +11089,14 @@ public class H5 implements java.io.Serializable {
      * @return Returns the character encoding of the string.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_char_encoding(long plist_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_char_encoding sets the character encoding of the string.
      *
      * @param plist_id
@@ -10205,7 +11105,7 @@ public class H5 implements java.io.Serializable {
      *            IN: the character encoding of the string
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_char_encoding(long plist_id, int encoding)
@@ -10214,6 +11114,8 @@ public class H5 implements java.io.Serializable {
     // /////// Link access property list (LAPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_nlinks retrieves the maximum number of soft or user-defined link traversals allowed, nlinks,
      * before the library assumes it has found a cycle and aborts the traversal. This value is retrieved from
      * the link access property list lapl_id.
@@ -10224,12 +11126,14 @@ public class H5 implements java.io.Serializable {
      * @return Returns a Maximum number of links to traverse.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native long H5Pget_nlinks(long lapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_nlinks sets the maximum number of soft or user-defined link traversals allowed, nlinks, before
      * the library assumes it has found a cycle and aborts the traversal. This value is set in the link access
      * property list lapl_id.
@@ -10242,7 +11146,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Argument is Illegal
      *
@@ -10251,6 +11155,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_elink_prefix Retrieves prefix applied to external link paths.
      *
      * @param lapl_id
@@ -10262,7 +11168,7 @@ public class H5 implements java.io.Serializable {
      *         the NULL terminator; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            prefix is null.
      *
@@ -10271,6 +11177,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_elink_prefix Sets prefix to be applied to external link paths.
      *
      * @param lapl_id
@@ -10281,7 +11189,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            prefix is null.
      *
@@ -10290,6 +11198,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_elink_fapl Retrieves the file access property list identifier associated with the link access
      * property list.
      *
@@ -10299,7 +11209,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public static long H5Pget_elink_fapl(long lapl_id) throws HDF5LibraryException
@@ -10316,6 +11226,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Pget_elink_fapl(long lapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_elink_fapl sets a file access property list for use in accessing a file pointed to by an
      * external link.
      *
@@ -10327,13 +11239,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_elink_fapl(long lapl_id, long fapl_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_elink_acc_flags retrieves the external link traversal file access flag from the specified link
      * access property list.
      *
@@ -10343,12 +11257,14 @@ public class H5 implements java.io.Serializable {
      * @return File access flag for link traversal.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_elink_acc_flags(long lapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_elink_acc_flags Sets the external link traversal file access flag in a link access property
      * list.
      *
@@ -10360,7 +11276,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception IllegalArgumentException
      *            Invalid Flag values.
      *
@@ -10371,6 +11287,8 @@ public class H5 implements java.io.Serializable {
     // /////// Object copy property list (OCPYPL) routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_copy_object retrieves the properties to be used when an object is copied.
      *
      * @param ocp_plist_id
@@ -10379,12 +11297,14 @@ public class H5 implements java.io.Serializable {
      * @return Copy option(s) set in the object copy property list
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_copy_object(long ocp_plist_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_copy_object Sets properties to be used when an object is copied.
      *
      * @param ocp_plist_id
@@ -10393,7 +11313,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Copy option(s) to be set
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pset_copy_object(long ocp_plist_id, int copy_options)
@@ -10402,6 +11322,8 @@ public class H5 implements java.io.Serializable {
     // /////// file drivers property list routines ///////
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fapl_core retrieve H5FD_CORE I/O settings.
      *
      * @param fapl_id
@@ -10412,7 +11334,7 @@ public class H5 implements java.io.Serializable {
      *            OUT: write to file name on flush setting
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void H5Pget_fapl_core(long fapl_id, long[] increment,
@@ -10420,6 +11342,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_core modifies the file access property list to use the H5FD_CORE driver.
      *
      * @param fapl_id
@@ -10432,7 +11356,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_core(long fapl_id, long increment,
@@ -10440,6 +11364,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fapl_direct queries properties set by the H5Pset_fapl_direct.
      *
      * @param fapl_id
@@ -10452,13 +11378,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_fapl_direct(long fapl_id, long[] info)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_direct Sets up use of the direct I/O driver.
      *
      * @param fapl_id
@@ -10473,13 +11401,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_direct(long fapl_id, long alignment, long block_size,
                                                              long cbuf_size) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fapl_family Returns information about the family file access property list.
      *
      * @param fapl_id
@@ -10492,7 +11422,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pget_fapl_family(long fapl_id, long[] memb_size,
@@ -10500,6 +11430,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_family Sets up use of the direct I/O driver.
      *
      * @param fapl_id
@@ -10512,13 +11444,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_family(long fapl_id, long memb_size, long memb_fapl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_hdfs Modify the file access property list to use the H5FD_HDFS driver.
      *
      * @param fapl_id
@@ -10529,13 +11463,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_hdfs(long fapl_id, H5FD_hdfs_fapl_t fapl_conf)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fapl_hdfs gets the properties hdfs I/O driver.
      *
      * @param fapl_id
@@ -10544,13 +11480,15 @@ public class H5 implements java.io.Serializable {
      * @return the properties of the hdfs driver.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native H5FD_hdfs_fapl_t H5Pget_fapl_hdfs(long fapl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fapl_multi Sets up use of the multi I/O driver.
      *
      * @param fapl_id
@@ -10568,7 +11506,7 @@ public class H5 implements java.io.Serializable {
      * @return a boolean value; Allows read-only access to incomplete file sets when TRUE.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an array is null.
      *
@@ -10579,6 +11517,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_multi Sets up use of the multi I/O driver.
      *
      * @param fapl_id
@@ -10596,7 +11536,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Allows read-only access to incomplete file sets when TRUE.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an array is null.
      *
@@ -10607,6 +11547,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_log Sets up the logging virtual file driver (H5FD_LOG) for use. H5Pset_fapl_log modifies
      * the file access property list to use the logging driver, H5FD_LOG. The logging virtual file driver
      * (VFD) is a clone of the standard SEC2 (H5FD_SEC2) driver with additional facilities for logging VFD
@@ -10622,7 +11564,7 @@ public class H5 implements java.io.Serializable {
      *            IN: The size of the logging buffers, in bytes.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            logfile is null.
      **/
@@ -10631,6 +11573,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_sec2 Sets up use of the sec2 I/O driver.
      *
      * @param fapl_id
@@ -10639,13 +11583,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_sec2(long fapl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_split Sets up use of the split I/O driver. Makes the multi driver act like the
      *        old split driver which stored meta data in one file and raw
      *        data in another file
@@ -10662,7 +11608,7 @@ public class H5 implements java.io.Serializable {
      *            IN: File access property list identifier raw data
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native void
@@ -10670,6 +11616,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_stdio Sets up use of the stdio I/O driver.
      *
      * @param fapl_id
@@ -10678,13 +11626,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_stdio(long fapl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_windows Sets up use of the windows I/O driver.
      *
      * @param fapl_id
@@ -10693,13 +11643,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_windows(long fapl_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pset_fapl_ros3 Modify the file access property list to use the H5FD_ROS3 driver.
      *
      * @param fapl_id
@@ -10710,13 +11662,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_ros3(long fapl_id, H5FD_ros3_fapl_t fapl_conf)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5P
+     *
      * H5Pget_fapl_ros3 gets the properties of the ros3 I/O driver.
      *
      * @param fapl_id
@@ -10725,7 +11679,7 @@ public class H5 implements java.io.Serializable {
      * @return the properties of the ros3 driver.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      *
      **/
     public synchronized static native H5FD_ros3_fapl_t H5Pget_fapl_ros3(long fapl_id)
@@ -10813,6 +11767,12 @@ public class H5 implements java.io.Serializable {
     // //
     // ////////////////////////////////////////////////////////////
     /**
+     * @defgroup JH5PL Java Plugin (H5PL) Interface
+     **/
+
+    /**
+     * @ingroup JH5PL
+     *
      * H5PLset_loading_state uses one argument to enable or disable individual plugins.
      *        The plugin_flags parameter is an encoded integer in which each bit controls a specific
      *        plugin or class of plugins.
@@ -10834,12 +11794,14 @@ public class H5 implements java.io.Serializable {
      *
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5PLset_loading_state(int plugin_flags)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLget_loading_state retrieves the state of the dynamic plugins flag, plugin_flags..
      *
      * @return the list of dynamic plugin types that are enabled or disabled.
@@ -10849,33 +11811,39 @@ public class H5 implements java.io.Serializable {
      *             If the value of plugin_flags is 0 (zero), all dynamic plugins are disabled.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5PLget_loading_state() throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLappend inserts the plugin path at the end of the table.
      *
      * @param plugin_path
      *            IN: Path for location of filter plugin libraries.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5PLappend(String plugin_path) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLprepend inserts the plugin path at the beginning of the table.
      *
      * @param plugin_path
      *            IN: Path for location of filter plugin libraries.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5PLprepend(String plugin_path) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLreplace replaces the plugin path at the specified index.
      *
      * @param plugin_path
@@ -10884,12 +11852,14 @@ public class H5 implements java.io.Serializable {
      *            IN: The table index (0-based).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5PLreplace(String plugin_path, int index)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLinsert inserts the plugin path at the specified index.
      *
      * @param plugin_path
@@ -10898,23 +11868,27 @@ public class H5 implements java.io.Serializable {
      *            IN: The table index (0-based).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5PLinsert(String plugin_path, int index)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLremove removes the plugin path at the specified index.
      *
      * @param index
      *            IN: The table index (0-based).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5PLremove(int index) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLget retrieves the plugin path at the specified index.
      *
      * @param index
@@ -10923,29 +11897,254 @@ public class H5 implements java.io.Serializable {
      * @return the current path at the index in plugin path table
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5PLget(int index) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5PL
+     *
      * H5PLsize retrieves the size of the current list of plugin paths.
      *
      * @return the current number of paths in the plugin path table
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5PLsize() throws HDF5LibraryException;
 
     // ////////////////////////////////////////////////////////////
     // //
-    // H5R: HDF5 1.12 Reference API Functions //
+    // H5R: HDF5 1.8 Reference API Functions //
     // //
     // ////////////////////////////////////////////////////////////
 
-    // Constructors //
+    /**
+     * @defgroup JH5R Java Reference (H5R) Interface
+     **/
+
+    private synchronized static native int H5Rcreate(byte[] ref, long loc_id, String name, int ref_type,
+                                                     long space_id)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+
+    /**
+     * @ingroup JH5R
+     *
+     * H5Rcreate creates the reference, ref, of the type specified in ref_type, pointing to the object name
+     * located at loc_id.
+     *
+     * @param loc_id
+     *            IN: Location identifier used to locate the object being pointed to.
+     * @param name
+     *            IN: Name of object at location loc_id.
+     * @param ref_type
+     *            IN: Type of reference.
+     * @param space_id
+     *            IN: Dataspace identifier with selection.
+     *
+     * @return the reference (byte[]) if successful
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF5 Library.
+     * @exception NullPointerException
+     *            an input array is null.
+     * @exception IllegalArgumentException
+     *            an input array is invalid.
+     **/
+    public synchronized static byte[] H5Rcreate(long loc_id, String name, int ref_type, long space_id)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException
+    {
+        /* These sizes are correct for HDF5.1.2 */
+        int ref_size = 8;
+        if (ref_type == HDF5Constants.H5R_DATASET_REGION) {
+            ref_size = 12;
+        }
+        byte rbuf[] = new byte[ref_size];
+
+        /* will raise an exception if fails */
+        H5Rcreate(rbuf, loc_id, name, ref_type, space_id);
+
+        return rbuf;
+    }
+
+    /**
+     * @ingroup JH5R
+     *
+     * Given a reference to some object, H5Rdereference opens that object and return an identifier.
+     *
+     * @param dataset
+     *            IN: Dataset containing reference object.
+     * @param access_list
+     *            IN: Property list of the object being referenced.
+     * @param ref_type
+     *            IN: The reference type of ref.
+     * @param ref
+     *            IN: reference to an object
+     *
+     * @return valid identifier if successful
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF5 Library.
+     * @exception NullPointerException
+     *            output array is null.
+     * @exception IllegalArgumentException
+     *            output array is invalid.
+     **/
+    public static long H5Rdereference(long dataset, long access_list, int ref_type, byte[] ref)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException
+    {
+        long id = _H5Rdereference(dataset, access_list, ref_type, ref);
+        if (id > 0) {
+            log.trace("OPEN_IDS: H5Rdereference add {}", id);
+            OPEN_IDS.add(id);
+            log.trace("OPEN_IDS: {}", OPEN_IDS.size());
+        }
+        return id;
+    }
+
+    private synchronized static native long _H5Rdereference(long dataset, long access_list, int ref_type,
+                                                            byte[] ref)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+
+    /**
+     * @ingroup JH5R
+     *
+     * H5Rget_name retrieves a name for the object identified by ref.
+     *
+     * @param loc_id
+     *            IN: Identifier for the dataset containing the reference or for the group that dataset is in.
+     * @param ref_type
+     *            IN: Type of reference.
+     * @param ref
+     *            IN: An object or dataset region reference.
+     * @param name
+     *            OUT: A name associated with the referenced object or dataset region.
+     * @param size
+     *            IN: The size of the name buffer.
+     *
+     * @return Returns the length of the name if successful, returning 0 (zero) if no name is associated with
+     *         the identifier. Otherwise returns a negative value.
+     *
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF5 Library.
+     * @exception NullPointerException
+     *            size is null.
+     * @exception IllegalArgumentException
+     *            Argument is illegal.
+     *
+     **/
+    public synchronized static native long H5Rget_name(long loc_id, int ref_type, byte[] ref, String[] name,
+                                                       long size)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+
+    /**
+     * @ingroup JH5R
+     *
+     * H5Rget_name_string retrieves a name for the object identified by ref.
+     *
+     * @param loc_id
+     *            IN: Identifier for the dataset containing the reference or for the group that dataset is in.
+     * @param ref_type
+     *            IN: Type of reference.
+     * @param ref
+     *            IN: An object or dataset region reference.
+     *
+     * @return Returns the name if successful, returning null if no name is associated with
+     *         the identifier.
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF5 Library.
+     * @exception NullPointerException
+     *            size is null.
+     * @exception IllegalArgumentException
+     *            Argument is illegal.
+     **/
+    public synchronized static native String H5Rget_name_string(long loc_id, int ref_type, byte[] ref)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+
+    /**
+     * @ingroup JH5R
+     *
+     * H5Rget_obj_type Given a reference to an object ref, H5Rget_obj_type returns the type of the object
+     * pointed to.
+     *
+     * @param loc_id
+     *            IN: loc_id of the reference object.
+     * @param ref_type
+     *            IN: Type of reference to query.
+     * @param ref
+     *            IN: the reference
+     *
+     * @return Returns the object type
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF5 Library.
+     * @exception NullPointerException
+     *            array is null.
+     * @exception IllegalArgumentException
+     *            array is invalid.
+     **/
+    public synchronized static native int H5Rget_obj_type(long loc_id, int ref_type, byte ref[])
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+
+    /**
+     * @ingroup JH5R
+     *
+     * H5Rget_obj_type2 Retrieves the type of object that an object reference points to.
+     *
+     * @see public static int H5Rget_obj_type(int loc_id, int ref_type, byte ref[])
+     **/
+    private synchronized static native int H5Rget_obj_type2(long loc_id, int ref_type, byte ref[],
+                                                            int[] obj_type)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+
+    /**
+     * @ingroup JH5R
+     *
+     * Given a reference to an object ref, H5Rget_region creates a copy of the dataspace of the dataset
+     * pointed to and defines a selection in the copy which is the region pointed to.
+     *
+     * @param loc_id
+     *            IN: loc_id of the reference object.
+     * @param ref_type
+     *            IN: The reference type of ref.
+     * @param ref
+     *            OUT: the reference to the object and region
+     *
+     * @return a valid identifier if successful
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF5 Library.
+     * @exception NullPointerException
+     *            output array is null.
+     * @exception IllegalArgumentException
+     *            output array is invalid.
+     **/
+    public static long H5Rget_region(long loc_id, int ref_type, byte[] ref)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException
+    {
+        long id = _H5Rget_region(loc_id, ref_type, ref);
+        if (id > 0) {
+            log.trace("OPEN_IDS: H5Rget_region add {}", id);
+            OPEN_IDS.add(id);
+            log.trace("OPEN_IDS: {}", OPEN_IDS.size());
+        }
+        return id;
+    }
+
+    private synchronized static native long _H5Rget_region(long loc_id, int ref_type, byte[] ref)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+
+    // ////////////////////////////////////////////////////////////
+    // //
+    // H5R: HDF5 1.12 Reference API Functions //
+    // //
+    // ////////////////////////////////////////////////////////////
 
     /**
+     * @ingroup JH5R
+     *
      * H5Rcreate_object creates a reference pointing to the object named name located at loc id.
      *
      * @param loc_id
@@ -10958,7 +12157,7 @@ public class H5 implements java.io.Serializable {
      * @return the reference (byte[]) if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -10968,6 +12167,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Rcreate_region creates the reference, pointing to the region represented by
      * space id within the object named name located at loc id.
      *
@@ -10983,7 +12184,7 @@ public class H5 implements java.io.Serializable {
      * @return the reference (byte[]) if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -10994,6 +12195,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Rcreate_attr creates the reference, pointing to the attribute named attr name
      * and attached to the object named name located at loc id.
      *
@@ -11009,7 +12212,7 @@ public class H5 implements java.io.Serializable {
      * @return the reference (byte[]) if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -11020,13 +12223,15 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Rdestroy destroys a reference and releases resources.
      *
      * @param ref_ptr
      *            IN: Reference to an object, region or attribute attached to an object.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -11036,6 +12241,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Rget_type retrieves the type of a reference.
      *
      * @param ref_ptr
@@ -11044,7 +12251,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid reference type if successful; otherwise returns H5R UNKNOWN.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -11054,6 +12261,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Requal determines whether two references point to the same object, region or attribute.
      *
      * @param ref1_ptr
@@ -11064,7 +12273,7 @@ public class H5 implements java.io.Serializable {
      * @return true if equal, else false
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -11074,6 +12283,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Rcopy creates a copy of an existing reference.
      *
      * @param src_ref_ptr
@@ -11082,7 +12293,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid copy of the reference (byte[]) if successful.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -11092,6 +12303,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Ropen_object opens that object and returns an identifier.
      * The object opened with this function should be closed when it is no longer needed
      * so that resource leaks will not develop. Use the appropriate close function such
@@ -11111,7 +12324,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -11133,6 +12346,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Ropen region creates a copy of the dataspace of the dataset pointed to by a region reference,
      * ref ptr, and defines a selection matching the selection pointed to by ref ptr within the dataspace
      * copy. Use H5Sclose to release the dataspace identifier returned by this function when the identifier is
@@ -11152,7 +12367,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -11174,6 +12389,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Ropen_attr opens the attribute attached to the object and returns an identifier.
      * The attribute opened with this function should be closed with H5Aclose when it is no longer needed
      * so that resource leaks will not develop.
@@ -11192,7 +12409,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid attribute identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -11213,9 +12430,9 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Ropen_attr(byte[] ref_ptr, long rapl_id, long aapl_id)
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
-    // Get type //
-
     /**
+     * @ingroup JH5R
+     *
      * H5Rget obj type3 retrieves the type of the referenced object pointed to.
      *
      * @param ref_ptr
@@ -11228,7 +12445,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns the object type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            array is null.
      * @exception IllegalArgumentException
@@ -11238,6 +12455,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Rget_file_name retrieves the file name for the object, region or attribute reference pointed to.
      *
      * @param ref_ptr
@@ -11246,7 +12465,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns the file name of the reference
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            array is null.
      * @exception IllegalArgumentException
@@ -11256,6 +12475,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Rget_obj_name retrieves the object name for the object, region or attribute reference pointed to.
      *
      * @param ref_ptr
@@ -11268,7 +12489,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns the object name of the reference
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            array is null.
      * @exception IllegalArgumentException
@@ -11278,6 +12499,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5R
+     *
      * H5Rget_attr_name retrieves the attribute name for the object, region or attribute reference pointed to.
      *
      * @param ref_ptr
@@ -11286,7 +12509,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns the attribute name of the reference
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            array is null.
      * @exception IllegalArgumentException
@@ -11297,218 +12520,18 @@ public class H5 implements java.io.Serializable {
 
     // ////////////////////////////////////////////////////////////
     // //
-    // H5R: HDF5 1.8 Reference API Functions //
+    // H5S: Dataspace Interface Functions //
     // //
     // ////////////////////////////////////////////////////////////
-
-    private synchronized static native int H5Rcreate(byte[] ref, long loc_id, String name, int ref_type,
-                                                     long space_id)
-        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
-
     /**
-     * H5Rcreate creates the reference, ref, of the type specified in ref_type, pointing to the object name
-     * located at loc_id.
-     *
-     * @param loc_id
-     *            IN: Location identifier used to locate the object being pointed to.
-     * @param name
-     *            IN: Name of object at location loc_id.
-     * @param ref_type
-     *            IN: Type of reference.
-     * @param space_id
-     *            IN: Dataspace identifier with selection.
-     *
-     * @return the reference (byte[]) if successful
-     *
-     * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
-     * @exception NullPointerException
-     *            an input array is null.
-     * @exception IllegalArgumentException
-     *            an input array is invalid.
+     * @defgroup JH5S Java Dataspace (H5S) Interface
      **/
-    public synchronized static byte[] H5Rcreate(long loc_id, String name, int ref_type, long space_id)
-        throws HDF5LibraryException, NullPointerException, IllegalArgumentException
-    {
-        /* These sizes are correct for HDF5.1.2 */
-        int ref_size = 8;
-        if (ref_type == HDF5Constants.H5R_DATASET_REGION) {
-            ref_size = 12;
-        }
-        byte rbuf[] = new byte[ref_size];
-
-        /* will raise an exception if fails */
-        H5Rcreate(rbuf, loc_id, name, ref_type, space_id);
-
-        return rbuf;
-    }
-
-    /**
-     * Given a reference to some object, H5Rdereference opens that object and return an identifier.
-     *
-     * @param dataset
-     *            IN: Dataset containing reference object.
-     * @param access_list
-     *            IN: Property list of the object being referenced.
-     * @param ref_type
-     *            IN: The reference type of ref.
-     * @param ref
-     *            IN: reference to an object
-     *
-     * @return valid identifier if successful
-     *
-     * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
-     * @exception NullPointerException
-     *            output array is null.
-     * @exception IllegalArgumentException
-     *            output array is invalid.
-     **/
-    public static long H5Rdereference(long dataset, long access_list, int ref_type, byte[] ref)
-        throws HDF5LibraryException, NullPointerException, IllegalArgumentException
-    {
-        long id = _H5Rdereference(dataset, access_list, ref_type, ref);
-        if (id > 0) {
-            log.trace("OPEN_IDS: H5Rdereference add {}", id);
-            OPEN_IDS.add(id);
-            log.trace("OPEN_IDS: {}", OPEN_IDS.size());
-        }
-        return id;
-    }
-
-    private synchronized static native long _H5Rdereference(long dataset, long access_list, int ref_type,
-                                                            byte[] ref)
-        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
-
-    /**
-     * H5Rget_name retrieves a name for the object identified by ref.
-     *
-     * @param loc_id
-     *            IN: Identifier for the dataset containing the reference or for the group that dataset is in.
-     * @param ref_type
-     *            IN: Type of reference.
-     * @param ref
-     *            IN: An object or dataset region reference.
-     * @param name
-     *            OUT: A name associated with the referenced object or dataset region.
-     * @param size
-     *            IN: The size of the name buffer.
-     *
-     * @return Returns the length of the name if successful, returning 0 (zero) if no name is associated with
-     *         the identifier. Otherwise returns a negative value.
-     *
-     *
-     * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
-     * @exception NullPointerException
-     *            size is null.
-     * @exception IllegalArgumentException
-     *            Argument is illegal.
-     *
-     **/
-    public synchronized static native long H5Rget_name(long loc_id, int ref_type, byte[] ref, String[] name,
-                                                       long size)
-        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
-
-    /**
-     * H5Rget_name_string retrieves a name for the object identified by ref.
-     *
-     * @param loc_id
-     *            IN: Identifier for the dataset containing the reference or for the group that dataset is in.
-     * @param ref_type
-     *            IN: Type of reference.
-     * @param ref
-     *            IN: An object or dataset region reference.
-     *
-     * @return Returns the name if successful, returning null if no name is associated with
-     *         the identifier.
-     *
-     * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
-     * @exception NullPointerException
-     *            size is null.
-     * @exception IllegalArgumentException
-     *            Argument is illegal.
-     **/
-    public synchronized static native String H5Rget_name_string(long loc_id, int ref_type, byte[] ref)
-        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
-
-    /**
-     * H5Rget_obj_type Given a reference to an object ref, H5Rget_obj_type returns the type of the object
-     * pointed to.
-     *
-     * @param loc_id
-     *            IN: loc_id of the reference object.
-     * @param ref_type
-     *            IN: Type of reference to query.
-     * @param ref
-     *            IN: the reference
-     *
-     * @return Returns the object type
-     *
-     * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
-     * @exception NullPointerException
-     *            array is null.
-     * @exception IllegalArgumentException
-     *            array is invalid.
-     **/
-    public synchronized static native int H5Rget_obj_type(long loc_id, int ref_type, byte ref[])
-        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
-
-    /**
-     * H5Rget_obj_type2 Retrieves the type of object that an object reference points to.
-     *
-     * @see public static int H5Rget_obj_type(int loc_id, int ref_type, byte ref[])
-     **/
-    private synchronized static native int H5Rget_obj_type2(long loc_id, int ref_type, byte ref[],
-                                                            int[] obj_type)
-        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
-
-    /**
-     * Given a reference to an object ref, H5Rget_region creates a copy of the dataspace of the dataset
-     * pointed to and defines a selection in the copy which is the region pointed to.
-     *
-     * @param loc_id
-     *            IN: loc_id of the reference object.
-     * @param ref_type
-     *            IN: The reference type of ref.
-     * @param ref
-     *            OUT: the reference to the object and region
-     *
-     * @return a valid identifier if successful
-     *
-     * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
-     * @exception NullPointerException
-     *            output array is null.
-     * @exception IllegalArgumentException
-     *            output array is invalid.
-     **/
-    public static long H5Rget_region(long loc_id, int ref_type, byte[] ref)
-        throws HDF5LibraryException, NullPointerException, IllegalArgumentException
-    {
-        long id = _H5Rget_region(loc_id, ref_type, ref);
-        if (id > 0) {
-            log.trace("OPEN_IDS: H5Rget_region add {}", id);
-            OPEN_IDS.add(id);
-            log.trace("OPEN_IDS: {}", OPEN_IDS.size());
-        }
-        return id;
-    }
-
-    private synchronized static native long _H5Rget_region(long loc_id, int ref_type, byte[] ref)
-        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
-
-    // ////////////////////////////////////////////////////////////
-    // //
-    // H5S: Dataspace Interface Functions //
-    // //
-    // ////////////////////////////////////////////////////////////
 
     /**************** Operations on dataspaces ********************/
 
     /**
+     * @ingroup JH5S
+     *
      * H5Screate creates a new dataspace of a particular type.
      *
      * @param type
@@ -11517,7 +12540,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Screate(int type) throws HDF5LibraryException
     {
@@ -11533,6 +12556,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Screate(int type) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Screate_simple creates a new simple data space and opens it for access.
      *
      * @param rank
@@ -11545,7 +12570,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier
      *
      * @exception HDF5Exception
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dims or maxdims is null.
      **/
@@ -11565,6 +12590,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5Exception, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sset_extent_simple sets or resets the size of an existing dataspace.
      *
      * @param space_id
@@ -11579,13 +12606,15 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Sset_extent_simple(long space_id, int rank, long[] current_size,
                                                                 long[] maximum_size)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sset_extent_simple sets or resets the size of an existing dataspace.
      *
      * @param space_id
@@ -11600,7 +12629,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static long H5Sset_extent_simple(long space_id, int rank, byte[] current_size,
                                                          byte[] maximum_size)
@@ -11615,6 +12644,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5S
+     *
      * H5Scopy creates a new dataspace which is an exact copy of the dataspace identified by space_id.
      *
      * @param space_id
@@ -11622,7 +12653,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Scopy(long space_id) throws HDF5LibraryException
     {
@@ -11638,6 +12669,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Scopy(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sclose releases a dataspace.
      *
      * @param space_id
@@ -11646,7 +12679,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Sclose(long space_id) throws HDF5LibraryException
     {
@@ -11662,6 +12695,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Sclose(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sencode converts a data space description into binary form in a buffer.
      *
      * @param obj_id
@@ -11670,12 +12705,14 @@ public class H5 implements java.io.Serializable {
      * @return the buffer for the object to be encoded into.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native byte[] H5Sencode(long obj_id)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sdecode reconstructs the HDF5 data space object and returns a new object handle for it.
      *
      * @param buf
@@ -11684,7 +12721,7 @@ public class H5 implements java.io.Serializable {
      * @return a new object handle
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -11692,19 +12729,24 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_simple_extent_npoints determines the number of elements in a dataspace.
      *
      * @param space_id
      *            ID of the dataspace object to query
+     *
      * @return the number of elements in the dataspace if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Sget_simple_extent_npoints(long space_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_simple_extent_ndims determines the dimensionality (or rank) of a dataspace.
      *
      * @param space_id
@@ -11713,12 +12755,14 @@ public class H5 implements java.io.Serializable {
      * @return the number of dimensions in the dataspace if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Sget_simple_extent_ndims(long space_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_simple_extent_dims returns the size and maximum sizes of each dimension of a dataspace through
      * the dims and maxdims parameters.
      *
@@ -11732,7 +12776,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of dimensions in the dataspace if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dims or maxdims is null.
      **/
@@ -11741,6 +12785,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sis_simple determines whether a dataspace is a simple dataspace.
      *
      * @param space_id
@@ -11749,11 +12795,13 @@ public class H5 implements java.io.Serializable {
      * @return true if is a simple dataspace
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Sis_simple(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_simple_extent_type queries a dataspace to determine the current class of a dataspace.
      *
      * @param space_id
@@ -11762,12 +12810,14 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace class name if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Sget_simple_extent_type(long space_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sset_extent_none removes the extent from a dataspace and sets the type to H5S_NONE.
      *
      * @param space_id
@@ -11776,11 +12826,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Sset_extent_none(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sextent_copy copies the extent from source_space_id to dest_space_id. This action may change the type
      * of the dataspace.
      *
@@ -11792,12 +12844,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Sextent_copy(long dest_space_id, long source_space_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sextent_equal determines whether the dataspace extents of two dataspaces, space1_id and space2_id,
      * are equal.
      *
@@ -11809,7 +12863,7 @@ public class H5 implements java.io.Serializable {
      * @return true if successful, else false
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Sextent_equal(long first_space_id, long second_space_id)
         throws HDF5LibraryException;
@@ -11817,6 +12871,8 @@ public class H5 implements java.io.Serializable {
     /***************** Operations on dataspace selections *****************/
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_select_type retrieves the type of selection currently defined for the dataspace space_id.
      *
      * @param space_id
@@ -11825,11 +12881,13 @@ public class H5 implements java.io.Serializable {
      * @return the dataspace selection type if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Sget_select_type(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_select_npoints determines the number of elements in the current selection of a dataspace.
      *
      * @param space_id
@@ -11838,11 +12896,13 @@ public class H5 implements java.io.Serializable {
      * @return the number of elements in the selection if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Sget_select_npoints(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_copy copies all the selection information (including offset) from the source
      * dataspace to the destination dataspace.
      *
@@ -11852,12 +12912,14 @@ public class H5 implements java.io.Serializable {
      *            ID of the source dataspace
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Sselect_copy(long dst_id, long src_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_valid verifies that the selection for the dataspace.
      *
      * @param space_id
@@ -11866,11 +12928,13 @@ public class H5 implements java.io.Serializable {
      * @return true if the selection is contained within the extent and FALSE if it is not or is an error.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Sselect_valid(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_adjust moves a selection by subtracting an offset from it.
      *
      * @param space_id
@@ -11879,7 +12943,7 @@ public class H5 implements java.io.Serializable {
      *            Offset to subtract
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            offset is null.
      **/
@@ -11887,8 +12951,10 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_select_bounds retrieves the coordinates of the bounding box containing the current selection and
-     * places them into user-supplied buffers. <P> The start and end buffers must be large enough to hold the
+     * places them into user-supplied buffers. <p> The start and end buffers must be large enough to hold the
      * dataspace rank number of coordinates.
      *
      * @param space_id
@@ -11901,7 +12967,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful,with start and end initialized.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            start or end is null.
      **/
@@ -11909,25 +12975,29 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_shape_same checks to see if the current selection in the dataspaces are the same
      * dimensionality and shape.
      * This is primarily used for reading the entire selection in one swoop.
      *
-     * @param space1_id
+     * @param   space1_id
      *            ID of 1st Dataspace pointer to compare
-     * @param space2_id
+     * @param   space2_id
      *            ID of 2nd Dataspace pointer to compare
      *
      * @return true if the selection is the same dimensionality and shape;
      *         false otherwise
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Sselect_shape_same(long space1_id, long space2_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_intersect_block checks to see if the current selection in the
      * dataspace intersects with the block given.
      *
@@ -11942,7 +13012,7 @@ public class H5 implements java.io.Serializable {
      *           FALSE otherwise
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            offset is null.
      **/
@@ -11951,6 +13021,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Soffset_simple sets the offset of a simple dataspace space_id.
      *
      * @param space_id
@@ -11961,7 +13033,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            offset array is null.
      **/
@@ -11969,6 +13041,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Soffset_simple sets the offset of a simple dataspace space_id.
      *
      * @param space_id
@@ -11979,7 +13053,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            offset array is null.
      **/
@@ -12000,6 +13074,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_all selects the entire extent of the dataspace space_id.
      *
      * @param space_id
@@ -12008,23 +13084,28 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Sselect_all(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_none resets the selection region for the dataspace space_id to include no elements.
      *
      * @param space_id
      *            IN: The identifier of the dataspace to be reset.
+     *
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Sselect_none(long space_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_elements selects array elements to be included in the selection for the space_id dataspace.
      *
      * @param space_id
@@ -12039,13 +13120,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     private synchronized static native int H5Sselect_elements(long space_id, int op, int num_elements,
                                                               byte[] coord)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_elements selects array elements to be included in the selection for the space_id dataspace.
      *
      * @param space_id
@@ -12062,7 +13145,7 @@ public class H5 implements java.io.Serializable {
      * @exception HDF5Exception
      *            Error in the data conversion
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            cord array is
      **/
@@ -12084,6 +13167,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_select_elem_npoints returns the number of element points in the current dataspace selection.
      *
      * @param spaceid
@@ -12092,12 +13177,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Sget_select_elem_npoints(long spaceid)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_select_elem_pointlist returns an array of of element points in the current dataspace selection.
      * The point coordinates have the same dimensionality (rank) as the dataspace they are located within, one
      * coordinate per point.
@@ -12114,7 +13201,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -12123,6 +13210,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_hyperslab selects a hyperslab region to add to the current selected region for the dataspace
      * specified by space_id. The start, stride, count, and block arrays must be the same size as the rank of
      * the dataspace.
@@ -12143,7 +13232,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -12166,6 +13255,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_hyperslab selects a hyperslab region to add to the current selected region for the dataspace
      * specified by space_id. The start, stride, count, and block arrays must be the same size as the rank of
      * the dataspace.
@@ -12186,7 +13277,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -12197,6 +13288,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Scombine_hyperslab combines a hyperslab selection with the current selection for a dataspace,
      * creating a new dataspace to return the generated selection.
      * If the current selection is not a hyperslab, it is freed and the hyperslab
@@ -12220,7 +13313,7 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace ID on success / H5I_INVALID_HID on failure
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an input array is null.
      * @exception IllegalArgumentException
@@ -12231,8 +13324,10 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Smodify_select refine an existing hyperslab selection with an operation, using a second
-     * hyperslab.  The first selection is modified to contain the result of
+     * hyperslab. The first selection is modified to contain the result of
      * space1 operated on by space2.
      *
      * @param space1_id
@@ -12243,12 +13338,14 @@ public class H5 implements java.io.Serializable {
      *            ID of the source dataspace
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Smodify_select(long space1_id, int op, long space2_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Scombine_select combines two existing hyperslab selections with an operation, returning
      * a new dataspace with the resulting selection.  The dataspace extent from
      * space1 is copied for the dataspace extent of the newly created dataspace.
@@ -12263,12 +13360,14 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace ID on success / H5I_INVALID_HID on failure
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Scombine_select(long space1_id, int op, long space2_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sis_regular_hyperslab retrieves a regular hyperslab selection for the dataspace specified
      * by space_id.
      *
@@ -12278,12 +13377,14 @@ public class H5 implements java.io.Serializable {
      * @return a TRUE/FALSE for hyperslab selection if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Sis_regular_hyperslab(long space_id)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_regular_hyperslab determines if a hyperslab selection is regular for the dataspace specified
      * by space_id. The start, stride, count, and block arrays must be the same size as the rank of the
      * dataspace.
@@ -12300,7 +13401,7 @@ public class H5 implements java.io.Serializable {
      *            OUT: Size of block in hyperslab.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            an output array is null.
      * @exception IllegalArgumentException
@@ -12311,6 +13412,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_select_hyper_nblocks returns the number of hyperslab blocks in the current dataspace selection.
      *
      * @param spaceid
@@ -12319,12 +13422,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Sget_select_hyper_nblocks(long spaceid)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sget_select_hyper_blocklist returns an array of hyperslab blocks. The block coordinates have the same
      * dimensionality (rank) as the dataspace they are located within. The list of blocks is formatted as
      * follows:
@@ -12350,7 +13455,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -12359,23 +13464,25 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5S
+     *
      * H5Sselect_project_intersection projects the intersection of the selections of src_space_id and
      * src_intersect_space_id within the selection of src_space_id as a
      * selection within the selection of dst_space_id.
      *
      * @param src_space_id
-     *          Selection that is mapped to dst_space_id, and intersected with src_intersect_space_id
+     *            Selection that is mapped to dst_space_id, and intersected with src_intersect_space_id
      * @param dst_space_id
-     *          Selection that is mapped to src_space_id
+     *            Selection that is mapped to src_space_id
      * @param src_intersect_space_id
-     *          Selection whose intersection with src_space_id is projected to dst_space_id to obtain the
-     *          result
+     *            Selection whose intersection with src_space_id is projected to dst_space_id to obtain the
+     *            result
      *
      * @return a dataspace with a selection equal to the intersection of
      *         src_intersect_space_id and src_space_id projected from src_space to dst_space on success
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long
     H5Sselect_project_intersection(long src_space_id, long dst_space_id, long src_intersect_space_id)
@@ -12398,8 +13505,13 @@ public class H5 implements java.io.Serializable {
     // H5T: Datatype Interface Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5T Java Datatype (H5T) Interface
+     **/
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tarray_create creates a new array datatype object.
      *
      * @param base_id
@@ -12412,7 +13524,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid datatype identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dim is null.
      **/
@@ -12432,6 +13544,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tclose releases a datatype.
      *
      * @param type_id
@@ -12440,7 +13554,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Tclose(long type_id) throws HDF5LibraryException
     {
@@ -12456,6 +13570,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Tclose(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tcommit saves a transient datatype as an immutable named datatype in a file.
      *
      * @param loc_id
@@ -12472,7 +13588,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Datatype access property list.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -12481,6 +13597,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tcommit_anon commits a transient datatype (not immutable) to a file, turning it into a named datatype
      * with the specified creation and property lists.
      *
@@ -12494,12 +13612,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Datatype access property list.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tcommit_anon(long loc_id, long type_id, long tcpl_id,
                                                           long tapl_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tcommitted queries a type to determine whether the type specified by the type identifier is a named
      * type or a transient type.
      *
@@ -12509,11 +13629,13 @@ public class H5 implements java.io.Serializable {
      * @return true the datatype has been committed
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Tcommitted(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tcompiler_conv finds out whether the library's conversion function from type src_id to type dst_id is
      * a compiler (hard) conversion.
      *
@@ -12523,13 +13645,15 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of destination datatype.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tcompiler_conv(long src_id, long dst_id)
         throws HDF5LibraryException;
 
     /**
-     ** H5Tconvert converts nelmts elements from the type specified by the src_id identifier to type dst_id.
+     * @ingroup JH5T
+     *
+     * H5Tconvert converts nelmts elements from the type specified by the src_id identifier to type dst_id.
      *
      * @param src_id
      *            IN: Identifier of source datatype.
@@ -12545,7 +13669,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Dataset transfer property list identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -12556,6 +13680,8 @@ public class H5 implements java.io.Serializable {
     // int H5Tconvert(int src_id, int dst_id, long nelmts, Pointer buf, Pointer background, int plist_id);
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tcopy copies an existing datatype. The returned type is always transient and unlocked.
      *
      * @param type_id
@@ -12565,7 +13691,7 @@ public class H5 implements java.io.Serializable {
      * @return a datatype identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tcopy(long type_id) throws HDF5LibraryException
     {
@@ -12581,6 +13707,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Tcopy(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tcreate creates a new dataype of the specified class with the specified number of bytes.
      *
      * @param tclass
@@ -12591,7 +13719,7 @@ public class H5 implements java.io.Serializable {
      * @return datatype identifier
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tcreate(int tclass, long size) throws HDF5LibraryException
     {
@@ -12607,6 +13735,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Tcreate(int type, long size) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tdecode reconstructs the HDF5 data type object and returns a new object handle for it.
      *
      * @param buf
@@ -12615,7 +13745,7 @@ public class H5 implements java.io.Serializable {
      * @return a new object handle
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -12634,6 +13764,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tdetect_class determines whether the datatype specified in dtype_id contains any datatypes of the
      * datatype class specified in dtype_class.
      *
@@ -12645,12 +13777,14 @@ public class H5 implements java.io.Serializable {
      * @return true if the datatype specified in dtype_id contains any datatypes of the datatype class
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Tdetect_class(long type_id, int cls)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tencode converts a data type description into binary form in a buffer.
      *
      * @param obj_id
@@ -12664,7 +13798,7 @@ public class H5 implements java.io.Serializable {
      * @return the size needed for the allocated buffer.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -12672,6 +13806,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     // /**
+    //  * @ingroup JH5T
+    //  *
     //  * H5Tencode converts a data type description into binary form in a buffer.
     //  *
     //  * @param obj_id
@@ -12680,12 +13816,14 @@ public class H5 implements java.io.Serializable {
     //  * @return the buffer for the object to be encoded into.
     //  *
     //  * @exception HDF5LibraryException
-    //  *            Error from the HDF-5 Library.
+    //  *            Error from the HDF5 Library.
     //  **/
     // public synchronized static native byte[] H5Tencode(int obj_id)
-    // throws HDF5LibraryException;
+    //     throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_create creates a new enumeration datatype based on the specified base datatype, parent_id,
      * which must be an integer type.
      *
@@ -12695,7 +13833,7 @@ public class H5 implements java.io.Serializable {
      * @return the datatype identifier for the new enumeration datatype
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tenum_create(long base_id) throws HDF5LibraryException
     {
@@ -12711,6 +13849,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Tenum_create(long base_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_insert inserts a new enumeration datatype member into an enumeration datatype.
      *
      * @param type
@@ -12721,7 +13861,7 @@ public class H5 implements java.io.Serializable {
      *            IN: The value of the member, data of the correct type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -12729,6 +13869,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_insert inserts a new enumeration datatype member into an enumeration datatype.
      *
      * @param type
@@ -12741,7 +13883,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -12752,6 +13894,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_insert inserts a new enumeration datatype member into an enumeration datatype.
      *
      * @param type
@@ -12764,7 +13908,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -12779,6 +13923,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_nameof finds the symbol name that corresponds to the specified value of the enumeration
      * datatype type.
      *
@@ -12792,7 +13938,7 @@ public class H5 implements java.io.Serializable {
      * @return the symbol name.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            value is null.
      **/
@@ -12802,6 +13948,8 @@ public class H5 implements java.io.Serializable {
     // int H5Tenum_nameof(int type, Pointer value, Buffer name/* out */, long size);
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_nameof finds the symbol name that corresponds to the specified value of the enumeration
      * datatype type.
      *
@@ -12817,7 +13965,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -12831,6 +13979,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_valueof finds the value that corresponds to the specified name of the enumeration datatype
      * type.
      *
@@ -12842,12 +13992,14 @@ public class H5 implements java.io.Serializable {
      *            OUT: The value of the member
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tenum_valueof(long type, String name, byte[] value)
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tenum_valueof finds the value that corresponds to the specified name of the enumeration datatype
      * type.
      *
@@ -12861,7 +14013,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -12875,6 +14027,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tequal determines whether two datatype identifiers refer to the same datatype.
      *
      * @param type_id1
@@ -12885,12 +14039,14 @@ public class H5 implements java.io.Serializable {
      * @return true if the datatype identifiers refer to the same datatype, else false.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Tequal(long type_id1, long type_id2)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_array_dims returns the sizes of the dimensions of the specified array datatype object.
      *
      * @param type_id
@@ -12901,7 +14057,7 @@ public class H5 implements java.io.Serializable {
      * @return the non-negative number of dimensions of the array type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dims is null.
      **/
@@ -12912,6 +14068,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_array_dims2 returns the sizes of the dimensions of the specified array datatype object.
      *
      * @param type_id
@@ -12922,7 +14080,7 @@ public class H5 implements java.io.Serializable {
      * @return the non-negative number of dimensions of the array type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            dims is null.
      **/
@@ -12930,6 +14088,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_array_ndims returns the rank, the number of dimensions, of an array datatype object.
      *
      * @param type_id
@@ -12938,11 +14098,13 @@ public class H5 implements java.io.Serializable {
      * @return the rank of the array
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_array_ndims(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_class returns the datatype class identifier.
      *
      * @param type_id
@@ -12951,11 +14113,13 @@ public class H5 implements java.io.Serializable {
      * @return datatype class identifier if successful; otherwise H5T_NO_CLASS(-1).
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_class(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_class_name returns the datatype class identifier.
      *
      * @param class_id
@@ -12996,6 +14160,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_create_plist returns a property list identifier for the datatype creation property list
      * associated with the datatype specified by type_id.
      *
@@ -13005,7 +14171,7 @@ public class H5 implements java.io.Serializable {
      * @return a datatype property list identifier.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tget_create_plist(long type_id) throws HDF5LibraryException
     {
@@ -13021,6 +14187,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Tget_create_plist(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_cset retrieves the character set type of a string datatype.
      *
      * @param type_id
@@ -13029,11 +14197,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid character set type if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_cset(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_cset the character set to be used.
      *
      * @param type_id
@@ -13044,11 +14214,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_cset(long type_id, int cset) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_ebias retrieves the exponent bias of a floating-point type.
      *
      * @param type_id
@@ -13057,11 +14229,13 @@ public class H5 implements java.io.Serializable {
      * @return the bias if successful; otherwise 0.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_ebias(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_ebias sets the exponent bias of a floating-point type.
      *
      * @param type_id
@@ -13072,7 +14246,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Tset_ebias(long type_id, int ebias) throws HDF5LibraryException
     {
@@ -13081,6 +14255,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_ebias retrieves the exponent bias of a floating-point type.
      *
      * @param type_id
@@ -13089,11 +14265,13 @@ public class H5 implements java.io.Serializable {
      * @return the bias
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Tget_ebias_long(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_ebias sets the exponent bias of a floating-point type.
      *
      * @param type_id
@@ -13102,11 +14280,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Exponent bias value.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tset_ebias(long type_id, long ebias) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_fields retrieves information about the locations of the various bit fields of a floating point
      * datatype.
      *
@@ -13123,7 +14303,7 @@ public class H5 implements java.io.Serializable {
      *            </ul>
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            fields is null.
      * @exception IllegalArgumentException
@@ -13133,6 +14313,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_fields retrieves information about the locations of the various bit fields of a floating point
      * datatype.
      *
@@ -13141,7 +14323,7 @@ public class H5 implements java.io.Serializable {
      * @param fields
      *            OUT: location of size and bit-position.
      *
-     *            <pre>
+     * <pre>
      *      fields[0] = spos  OUT: location to return size of in bits.
      *      fields[1] = epos  OUT: location to return exponent bit-position.
      *      fields[2] = esize OUT: location to return size of exponent in bits.
@@ -13152,7 +14334,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            fields is null.
      * @exception IllegalArgumentException
@@ -13168,6 +14350,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_fields sets the locations and sizes of the various floating point bit fields.
      *
      * @param type_id
@@ -13184,12 +14368,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Size of mantissa in bits.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tset_fields(long type_id, long spos, long epos, long esize,
                                                          long mpos, long msize) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_fields sets the locations and sizes of the various floating point bit fields.
      *
      * @param type_id
@@ -13208,7 +14394,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Tset_fields(long type_id, int spos, int epos, int esize, int mpos, int msize)
         throws HDF5LibraryException
@@ -13218,6 +14404,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_inpad retrieves the internal padding type for unused bits in floating-point datatypes.
      *
      * @param type_id
@@ -13226,11 +14414,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid padding type if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_inpad(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * If any internal bits of a floating point type are unused (that is, those significant bits which are not
      * part of the sign, exponent, or mantissa), then H5Tset_inpad will be filled according to the value of
      * the padding value property inpad.
@@ -13243,11 +14433,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *             Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_inpad(long type_id, int inpad) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_member_class returns the class of datatype of the specified member.
      *
      * @param type_id
@@ -13258,12 +14450,14 @@ public class H5 implements java.io.Serializable {
      * @return the class of the datatype of the field if successful;
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_member_class(long type_id, int membno)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_member_index retrieves the index of a field of a compound datatype.
      *
      * @param type_id
@@ -13274,12 +14468,14 @@ public class H5 implements java.io.Serializable {
      * @return if field is defined, the index; else negative.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_member_index(long type_id, String field_name)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_member_name retrieves the name of a field of a compound datatype or an element of an enumeration
      * datatype.
      *
@@ -13291,14 +14487,16 @@ public class H5 implements java.io.Serializable {
      * @return a valid pointer to the name if successful; otherwise null.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Tget_member_name(long type_id, int field_idx)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_member_offset returns the byte offset of the specified member of the compound datatype. This is
-     * the byte offset in the HDF-5 file/library, NOT the offset of any Java object which might be mapped to
+     * the byte offset in the HDF5 file/library, NOT the offset of any Java object which might be mapped to
      * this data item.
      *
      * @param type_id
@@ -13311,6 +14509,8 @@ public class H5 implements java.io.Serializable {
     public synchronized static native long H5Tget_member_offset(long type_id, int membno);
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_member_type returns the datatype of the specified member.
      *
      * @param type_id
@@ -13321,7 +14521,7 @@ public class H5 implements java.io.Serializable {
      * @return the identifier of a copy of the datatype of the field if successful;
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tget_member_type(long type_id, int field_idx) throws HDF5LibraryException
     {
@@ -13338,6 +14538,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_member_value returns the value of the enumeration datatype member memb_no.
      *
      * @param type_id
@@ -13348,7 +14550,7 @@ public class H5 implements java.io.Serializable {
      *            OUT: The value of the member
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            value is null.
      **/
@@ -13356,6 +14558,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_member_value returns the value of the enumeration datatype member memb_no.
      *
      * @param type_id
@@ -13368,7 +14572,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            value is null.
      **/
@@ -13382,6 +14586,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_native_type returns the equivalent native datatype for the datatype specified in type_id.
      *
      * @param type_id
@@ -13391,7 +14597,7 @@ public class H5 implements java.io.Serializable {
      * @return the native datatype identifier for the specified dataset datatype.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static long H5Tget_native_type(long type_id) throws HDF5LibraryException
     {
@@ -13399,6 +14605,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_native_type returns the equivalent native datatype for the datatype specified in type_id.
      *
      * @param type_id
@@ -13409,7 +14617,7 @@ public class H5 implements java.io.Serializable {
      * @return the native datatype identifier for the specified dataset datatype.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tget_native_type(long type_id, int direction) throws HDF5LibraryException
     {
@@ -13426,6 +14634,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_nmembers retrieves the number of fields a compound datatype has.
      *
      * @param type_id
@@ -13434,11 +14644,13 @@ public class H5 implements java.io.Serializable {
      * @return number of members datatype has if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_nmembers(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_norm retrieves the mantissa normalization of a floating-point datatype.
      *
      * @param type_id
@@ -13447,11 +14659,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid normalization type if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_norm(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_norm sets the mantissa normalization of a floating-point datatype.
      *
      * @param type_id
@@ -13462,11 +14676,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_norm(long type_id, int norm) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_offset retrieves the bit offset of the first significant bit.
      *
      * @param type_id
@@ -13475,11 +14691,13 @@ public class H5 implements java.io.Serializable {
      * @return a positive offset value if successful; otherwise 0.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_offset(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_offset sets the bit offset of the first significant bit.
      *
      * @param type_id
@@ -13490,7 +14708,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Tset_offset(long type_id, int offset) throws HDF5LibraryException
     {
@@ -13499,6 +14717,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_offset sets the bit offset of the first significant bit.
      *
      * @param type_id
@@ -13507,12 +14727,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Offset of first significant bit.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tset_offset(long type_id, long offset)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_order returns the byte order of an atomic datatype.
      *
      * @param type_id
@@ -13521,11 +14743,13 @@ public class H5 implements java.io.Serializable {
      * @return a byte order constant if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_order(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_order sets the byte ordering of an atomic datatype.
      *
      * @param type_id
@@ -13536,11 +14760,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_order(long type_id, int order) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_pad retrieves the padding type of the least and most-significant bit padding.
      *
      * @param type_id
@@ -13556,7 +14782,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            pad is null.
      **/
@@ -13564,6 +14790,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_pad sets the least and most-significant bits padding types.
      *
      * @param type_id
@@ -13576,12 +14804,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_pad(long type_id, int lsb, int msb)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_precision returns the precision of an atomic datatype.
      *
      * @param type_id
@@ -13590,11 +14820,13 @@ public class H5 implements java.io.Serializable {
      * @return the number of significant bits if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_precision(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_precision sets the precision of an atomic datatype.
      *
      * @param type_id
@@ -13605,7 +14837,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static int H5Tset_precision(long type_id, int precision) throws HDF5LibraryException
     {
@@ -13614,6 +14846,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_precision returns the precision of an atomic datatype.
      *
      * @param type_id
@@ -13622,11 +14856,13 @@ public class H5 implements java.io.Serializable {
      * @return the number of significant bits if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Tget_precision_long(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_precision sets the precision of an atomic datatype.
      *
      * @param type_id
@@ -13635,12 +14871,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Number of bits of precision for datatype.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tset_precision(long type_id, long precision)
         throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_sign retrieves the sign type for an integer type.
      *
      * @param type_id
@@ -13649,11 +14887,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid sign type if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_sign(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_sign sets the sign proprety for an integer type.
      *
      * @param type_id
@@ -13664,11 +14904,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_sign(long type_id, int sign) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_size returns the size of a datatype in bytes.
      *
      * @param type_id
@@ -13677,11 +14919,13 @@ public class H5 implements java.io.Serializable {
      * @return the size of the datatype in bytes
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5Tget_size(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_size sets the total size in bytes, size, for an atomic datatype (this operation is not permitted
      * on compound datatypes).
      *
@@ -13693,11 +14937,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_size(long type_id, long size) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_strpad retrieves the string padding method for a string datatype.
      *
      * @param type_id
@@ -13706,11 +14952,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid string padding type if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tget_strpad(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_strpad defines the storage mechanism for the string.
      *
      * @param type_id
@@ -13721,11 +14969,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_strpad(long type_id, int strpad) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_super returns the type from which TYPE is derived.
      *
      * @param type
@@ -13734,7 +14984,7 @@ public class H5 implements java.io.Serializable {
      * @return the parent type
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tget_super(long type) throws HDF5LibraryException
     {
@@ -13750,6 +15000,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Tget_super(long type) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tget_tag returns the tag associated with datatype type_id.
      *
      * @param type
@@ -13758,11 +15010,13 @@ public class H5 implements java.io.Serializable {
      * @return the tag
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5Tget_tag(long type) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tset_tag tags an opaque datatype type_id with a unique ASCII identifier tag.
      *
      * @param type
@@ -13773,11 +15027,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tset_tag(long type, String tag) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tinsert adds another member to the compound datatype type_id.
      *
      * @param type_id
@@ -13792,7 +15048,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -13800,6 +15056,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tis_variable_str determines whether the datatype identified in type_id is a variable-length string.
      *
      * @param type_id
@@ -13808,11 +15066,13 @@ public class H5 implements java.io.Serializable {
      * @return true if type_id is a variable-length string.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5Tis_variable_str(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tlock locks the datatype specified by the type_id identifier, making it read-only and
      * non-destrucible.
      *
@@ -13822,11 +15082,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tlock(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Topen opens a named datatype at the location specified by loc_id and return an identifier for the
      * datatype.
      *
@@ -13840,7 +15102,7 @@ public class H5 implements java.io.Serializable {
      * @return a named datatype identifier if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            name is null.
      **/
@@ -13860,6 +15122,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tpack recursively removes padding from within a compound datatype to make it more efficient
      * (space-wise) to store that data. <P> <b>WARNING:</b> This call only affects the C-data, even if it
      * succeeds, there may be no visible effect on Java objects.
@@ -13870,11 +15134,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Tpack(long type_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Treclaim reclaims buffer used for VL data.
      *
      * @param type_id
@@ -13887,7 +15153,7 @@ public class H5 implements java.io.Serializable {
      *            Buffer with data to be reclaimed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
      *            buf is null.
      **/
@@ -13896,6 +15162,8 @@ public class H5 implements java.io.Serializable {
         throws HDF5LibraryException, NullPointerException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tvlen_create creates a new variable-length (VL) dataype.
      *
      * @param base_id
@@ -13904,7 +15172,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public static long H5Tvlen_create(long base_id) throws HDF5LibraryException
     {
@@ -13920,6 +15188,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Tvlen_create(long base_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Tflush causes all buffers associated with a committed datatype to be immediately flushed to disk
      * without removing the data from the cache.
      *
@@ -13927,11 +15197,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the committed datatype to be flushed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Tflush(long dtype_id) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5T
+     *
      * H5Trefresh causes all buffers associated with a committed datatype to be cleared and immediately
      * re-loaded with updated contents from disk. This function essentially closes the datatype, evicts
      * all metadata associated with it from the cache, and then re-opens the datatype. The reopened datatype
@@ -13941,7 +15213,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the committed datatype to be refreshed.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5Trefresh(long dtype_id) throws HDF5LibraryException;
 
@@ -13961,9 +15233,13 @@ public class H5 implements java.io.Serializable {
     // H5VL: VOL Interface Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5VL Java VOL Connector (H5VL) Interface
+     **/
 
-    /// VOL Connector Functionality
     /**
+     * @ingroup JH5VL
+     *
      * H5VLregister_connector_by_name registers a new VOL connector as a member of the virtual object layer
      * class.
      *
@@ -13976,11 +15252,13 @@ public class H5 implements java.io.Serializable {
      * @return a VOL connector ID
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5VLregister_connector_by_name(String connector_name, long vipl_id)
         throws HDF5LibraryException;
     /**
+     * @ingroup JH5VL
+     *
      * H5VLregister_connector_by_value registers a new VOL connector as a member of the virtual object layer
      * class.
      *
@@ -13993,11 +15271,13 @@ public class H5 implements java.io.Serializable {
      * @return a VOL connector ID
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5VLregister_connector_by_value(int connector_value, long vipl_id)
         throws HDF5LibraryException;
     /**
+     * @ingroup JH5VL
+     *
      * H5VLis_connector_registered_by_name tests whether a VOL class has been registered.
      *
      * @param name
@@ -14006,11 +15286,13 @@ public class H5 implements java.io.Serializable {
      * @return true if a VOL connector with that name has been registered
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5VLis_connector_registered_by_name(String name)
         throws HDF5LibraryException;
     /**
+     * @ingroup JH5VL
+     *
      * H5VLis_connector_registered_by_value tests whether a VOL class has been registered.
      *
      * @param connector_value
@@ -14019,11 +15301,13 @@ public class H5 implements java.io.Serializable {
      * @return  true if a VOL connector with that value has been registered
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native boolean H5VLis_connector_registered_by_value(int connector_value)
         throws HDF5LibraryException;
     /**
+     * @ingroup JH5VL
+     *
      * H5VLget_connector_id retrieves the ID for a registered VOL connector for a given object.
      *
      * @param object_id
@@ -14032,10 +15316,12 @@ public class H5 implements java.io.Serializable {
      * @return a VOL connector ID
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5VLget_connector_id(long object_id) throws HDF5LibraryException;
     /**
+     * @ingroup JH5VL
+     *
      * H5VLget_connector_id_by_name retrieves the ID for a registered VOL connector.
      *
      * @param name
@@ -14044,11 +15330,13 @@ public class H5 implements java.io.Serializable {
      * @return a VOL connector ID
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5VLget_connector_id_by_name(String name)
         throws HDF5LibraryException;
     /**
+     * @ingroup JH5VL
+     *
      * H5VLget_connector_id_by_value retrieves the ID for a registered VOL connector.
      *
      * @param connector_value
@@ -14057,11 +15345,13 @@ public class H5 implements java.io.Serializable {
      * @return a VOL connector ID
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native long H5VLget_connector_id_by_value(int connector_value)
         throws HDF5LibraryException;
     /**
+     * @ingroup JH5VL
+     *
      * H5VLget_connector_name returns the connector name for the VOL associated with the
      * object or file ID.
      *
@@ -14071,28 +15361,32 @@ public class H5 implements java.io.Serializable {
      * @return the connector name
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native String H5VLget_connector_name(long object_id)
         throws HDF5LibraryException;
     /**
+     * @ingroup JH5VL
+     *
      * H5VLclose closes a VOL connector ID.
      *
      * @param connector_id
      *            IN: Identifier of the connector.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5VLclose(long connector_id) throws HDF5LibraryException;
     /**
+     * @ingroup JH5VL
+     *
      * H5VLunregister_connector removes a VOL connector ID from the library.
      *
      * @param connector_id
      *            IN: Identifier of the connector.
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native void H5VLunregister_connector(long connector_id)
         throws HDF5LibraryException;
@@ -14105,8 +15399,13 @@ public class H5 implements java.io.Serializable {
     // H5Z: Filter Interface Functions //
     // //
     // ////////////////////////////////////////////////////////////
+    /**
+     * @defgroup JH5Z Java Filter (H5Z) Interface
+     **/
 
     /**
+     * @ingroup JH5Z
+     *
      * H5Zfilter_avail checks if a filter is available.
      *
      * @param filter
@@ -14115,11 +15414,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative(TRUE/FALSE) value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Zfilter_avail(int filter) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5Z
+     *
      * H5Zget_filter_info gets information about a pipeline data filter.
      *
      * @param filter
@@ -14128,11 +15429,13 @@ public class H5 implements java.io.Serializable {
      * @return the filter information flags
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Zget_filter_info(int filter) throws HDF5LibraryException;
 
     /**
+     * @ingroup JH5Z
+     *
      * H5Zunregister unregisters a filter.
      *
      * @param filter
@@ -14141,7 +15444,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *            Error from the HDF-5 Library.
+     *            Error from the HDF5 Library.
      **/
     public synchronized static native int H5Zunregister(int filter) throws HDF5LibraryException;
 
diff --git a/java/src/hdf/hdf5lib/HDF5Constants.java b/java/src/hdf/hdf5lib/HDF5Constants.java
index 2f5ec91..67b9449 100644
--- a/java/src/hdf/hdf5lib/HDF5Constants.java
+++ b/java/src/hdf/hdf5lib/HDF5Constants.java
@@ -16,14 +16,15 @@ package hdf.hdf5lib;
 import hdf.hdf5lib.structs.H5O_token_t;
 
 /**
+ * @page HDF5CONST Constants and Enumerated Types
  * This class contains C constants and enumerated types of HDF5 library. The
- * values of these constants are obtained from the library by calling J2C(int
- * jconstant), where jconstant is any of the private constants which start their
- * name with "JH5" need to be converted.
+ * values of these constants are obtained from the library by calling
+ * the JNI function jconstant, where jconstant is any of the private constants
+ * which start their name with "H5" need to be converted.
  * <P>
  * <B>Do not edit this file!</b>
  *
- * <b>See also:</b> hdf.hdf5lib.HDF5Library
+ * @see @ref HDF5LIB
  */
 public class HDF5Constants {
     static { H5.loadH5Lib(); }
@@ -32,8 +33,6 @@ public class HDF5Constants {
     // Get the HDF5 constants from the library //
     // /////////////////////////////////////////////////////////////////////////
 
-    // public static final long H5_QUARTER_HADDR_MAX = H5_QUARTER_HADDR_MAX();
-
     /** Special parameters for szip compression */
     public static final int H5_SZIP_MAX_PIXELS_PER_BLOCK = H5_SZIP_MAX_PIXELS_PER_BLOCK();
     /** Special parameters for szip compression */
diff --git a/java/src/hdf/hdf5lib/HDF5GroupInfo.java b/java/src/hdf/hdf5lib/HDF5GroupInfo.java
deleted file mode 100644
index 220cfb6..0000000
--- a/java/src/hdf/hdf5lib/HDF5GroupInfo.java
+++ /dev/null
@@ -1,182 +0,0 @@
-/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
- * Copyright by The HDF Group.                                               *
- * Copyright by the Board of Trustees of the University of Illinois.         *
- * All rights reserved.                                                      *
- *                                                                           *
- * This file is part of HDF5.  The full HDF5 copyright notice, including     *
- * terms governing use, modification, and redistribution, is contained in    *
- * the COPYING file, which can be found at the root of the source code       *
- * distribution tree, or in https://www.hdfgroup.org/licenses.               *
- * If you do not have access to either file, you may request a copy from     *
- * help@hdfgroup.org.                                                        *
- * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
-
-package hdf.hdf5lib;
-
-/**
- * <p>
- * This class is a container for the information reported about an HDF5 Object
- * from the H5Gget_obj_info() method.
- * <p>
- * The fileno and objno fields contain four values which uniquely identify an
- * object among those HDF5 files which are open: if all four values are the same
- * between two objects, then the two objects are the same (provided both files
- * are still open). The nlink field is the number of hard links to the object or
- * zero when information is being returned about a symbolic link (symbolic links
- * do not have hard links but all other objects always have at least one). The
- * type field contains the type of the object, one of H5G_GROUP, H5G_DATASET, or
- * H5G_LINK. The mtime field contains the modification time. If information is
- * being returned about a symbolic link then linklen will be the length of the
- * link value (the name of the pointed-to object with the null terminator);
- * otherwise linklen will be zero. Other fields may be added to this structure
- * in the future.
- */
-
-public class HDF5GroupInfo {
-    long[] fileno;
-    long[] objno;
-    int nlink;
-    int type;
-    long mtime;
-    int linklen;
-
-    /**
-     * Container for the information reported about an HDF5 Object
-     * from the H5Gget_obj_info() method
-     */
-    public HDF5GroupInfo()
-    {
-        fileno  = new long[2];
-        objno   = new long[2];
-        nlink   = -1;
-        type    = -1;
-        mtime   = 0;
-        linklen = 0;
-    }
-
-    /**
-     * Sets the HDF5 group information. Used by the JHI5.
-     *
-     * @param fn
-     *            File id number
-     * @param on
-     *            Object id number
-     * @param nl
-     *            Number of links
-     * @param t
-     *            Type of the object
-     * @param mt
-     *            Modification time
-     * @param len
-     *            Length of link
-     **/
-    public void setGroupInfo(long[] fn, long[] on, int nl, int t, long mt, int len)
-    {
-        fileno  = fn;
-        objno   = on;
-        nlink   = nl;
-        type    = t;
-        mtime   = mt;
-        linklen = len;
-    }
-
-    /** Resets all the group information to defaults. */
-    public void reset()
-    {
-        fileno[0] = 0;
-        fileno[1] = 0;
-        objno[0]  = 0;
-        objno[1]  = 0;
-        nlink     = -1;
-        type      = -1;
-        mtime     = 0;
-        linklen   = 0;
-    }
-
-    /**
-     * fileno accessors
-     * @return the file number if successful
-     */
-    public long[] getFileno() { return fileno; }
-
-    /**
-     * accessors
-     * @return the object number if successful
-     */
-    public long[] getObjno() { return objno; }
-
-    /**
-     * accessors
-     * @return type of group if successful
-     */
-    public int getType() { return type; }
-
-    /**
-     * accessors
-     * @return the number of links in the group if successful
-     */
-    public int getNlink() { return nlink; }
-
-    /**
-     * accessors
-     * @return the modified time value if successful
-     */
-    public long getMtime() { return mtime; }
-
-    /**
-     * accessors
-     * @return a length of link name if successful
-     */
-    public int getLinklen() { return linklen; }
-
-    /**
-     * The fileno and objno fields contain four values which uniquely identify
-     * an object among those HDF5 files.
-     */
-    @Override
-    public boolean equals(Object obj)
-    {
-        if (!(obj instanceof HDF5GroupInfo)) {
-            return false;
-        }
-
-        HDF5GroupInfo target = (HDF5GroupInfo)obj;
-        if ((fileno[0] == target.fileno[0]) && (fileno[1] == target.fileno[1]) &&
-            (objno[0] == target.objno[0]) && (objno[1] == target.objno[1])) {
-            return true;
-        }
-        else {
-            return false;
-        }
-    }
-
-    /**
-     * Returns the object id.
-     *
-     * @return the object id
-     */
-    public long getOID() { return objno[0]; }
-
-    /**
-     * /** Converts this object to a String representation.
-     *
-     * @return a string representation of this object
-     */
-    @Override
-    public String toString()
-    {
-        String fileStr = "fileno=null";
-        String objStr  = "objno=null";
-
-        if (fileno != null) {
-            fileStr = "fileno[0]=" + fileno[0] + ",fileno[1]=" + fileno[1];
-        }
-
-        if (objno != null) {
-            objStr = "objno[0]=" + objno[0] + ",objno[1]=" + objno[1];
-        }
-
-        return getClass().getName() + "[" + fileStr + "," + objStr + ",type=" + type + ",nlink=" + nlink +
-            ",mtime=" + mtime + ",linklen=" + linklen + "]";
-    }
-}
diff --git a/java/src/hdf/hdf5lib/HDFArray.java b/java/src/hdf/hdf5lib/HDFArray.java
index 8525fb0..9ea314d 100644
--- a/java/src/hdf/hdf5lib/HDFArray.java
+++ b/java/src/hdf/hdf5lib/HDFArray.java
@@ -19,14 +19,15 @@ import hdf.hdf5lib.exceptions.HDF5Exception;
 import hdf.hdf5lib.exceptions.HDF5JavaException;
 
 /**
+ * @page HDFARRAY Java Array Conversion
  * This is a class for handling multidimensional arrays for HDF.
  * <p>
  * The purpose is to allow the storage and retrieval of arbitrary array types containing scientific data.
  * <p>
  * The methods support the conversion of an array to and from Java to a one-dimensional array of bytes
- * suitable for I/O by the C library. <p> This class heavily uses the <a
- * href="./hdf.hdf5lib.HDFNativeData.html">HDFNativeData</a> class to convert between Java and C
- * representations.
+ * suitable for I/O by the C library. <p> This class heavily uses the
+ * @ref HDFNATIVE
+ * class to convert between Java and C representations.
  */
 
 public class HDFArray {
diff --git a/java/src/hdf/hdf5lib/HDFNativeData.java b/java/src/hdf/hdf5lib/HDFNativeData.java
index c497043..bc4e866 100644
--- a/java/src/hdf/hdf5lib/HDFNativeData.java
+++ b/java/src/hdf/hdf5lib/HDFNativeData.java
@@ -17,11 +17,12 @@ import hdf.hdf5lib.exceptions.HDF5Exception;
 import hdf.hdf5lib.exceptions.HDF5JavaException;
 
 /**
+ * @page HDFNATIVE Native Arrays of Numbers
  * This class encapsulates native methods to deal with arrays of numbers,
  * converting from numbers to bytes and bytes to numbers.
  * <p>
- * These routines are used by class <b>HDFArray</b> to pass data to and from the
- * HDF-5 library.
+ * These routines are used by class @ref HDFARRAY to pass data to and from the
+ * HDF5 library.
  * <p>
  * Methods xxxToByte() convert a Java array of primitive numbers (int, short,
  * ...) to a Java array of bytes. Methods byteToXxx() convert from a Java array
@@ -30,7 +31,7 @@ import hdf.hdf5lib.exceptions.HDF5JavaException;
  * Variant interfaces convert a section of an array, and also can convert to
  * sub-classes of Java <b>Number</b>.
  * <P>
- * <b>See also:</b> hdf.hdf5lib.HDFArray.
+ * @see @ref HDFARRAY.
  */
 
 public class HDFNativeData {
diff --git a/java/src/hdf/hdf5lib/callbacks/Callbacks.java b/java/src/hdf/hdf5lib/callbacks/Callbacks.java
index 86d6193..3d5fbd1 100644
--- a/java/src/hdf/hdf5lib/callbacks/Callbacks.java
+++ b/java/src/hdf/hdf5lib/callbacks/Callbacks.java
@@ -13,6 +13,7 @@
 package hdf.hdf5lib.callbacks;
 
 /**
+ * @page CALLBACKS HDF5 Java Callbacks Interface
  * All callback definitions must derive from this interface.  Any
  * derived interfaces must define a single public method  named "callback".
  * You are responsible for deregistering your callback (if necessary)
@@ -20,11 +21,14 @@ package hdf.hdf5lib.callbacks;
  * a callback which has been GC'd, you will likely crash the VM.  If
  * there is no method to deregister the callback (e.g. <code>atexit</code>
  * in the C library), you must ensure that you always keep a live reference
- * to the callback object.<p>
+ * to the callback object.
+ *
  * A callback should generally never throw an exception, since it doesn't
  * necessarily have an encompassing Java environment to catch it.  Any
  * exceptions thrown will be passed to the default callback exception
  * handler.
+ *
+ * @defgroup JCALL HDF5 Library Java Callbacks
  */
 public interface Callbacks {
 }
diff --git a/java/src/hdf/hdf5lib/callbacks/H5A_iterate_cb.java b/java/src/hdf/hdf5lib/callbacks/H5A_iterate_cb.java
index 6c68f36..9958b3b 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5A_iterate_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5A_iterate_cb.java
@@ -20,6 +20,8 @@ import hdf.hdf5lib.structs.H5A_info_t;
  */
 public interface H5A_iterate_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each attribute
      *
      *  @param loc_id    the ID for the group or dataset being iterated over
diff --git a/java/src/hdf/hdf5lib/callbacks/H5D_append_cb.java b/java/src/hdf/hdf5lib/callbacks/H5D_append_cb.java
index cf7ada6..49323a2 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5D_append_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5D_append_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5D_append_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each dataset access property list
      *
      *  @param dataset_id    the ID for the dataset being iterated over
diff --git a/java/src/hdf/hdf5lib/callbacks/H5D_iterate_cb.java b/java/src/hdf/hdf5lib/callbacks/H5D_iterate_cb.java
index 54c12e3..5f77998 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5D_iterate_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5D_iterate_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5D_iterate_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each dataset element
      *
      *  @param elem      the pointer to the element in memory containing the current point
diff --git a/java/src/hdf/hdf5lib/callbacks/H5E_walk_cb.java b/java/src/hdf/hdf5lib/callbacks/H5E_walk_cb.java
index 5722195..a8ef5df 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5E_walk_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5E_walk_cb.java
@@ -20,6 +20,8 @@ import hdf.hdf5lib.structs.H5E_error2_t;
  */
 public interface H5E_walk_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each error stack element
      *
      *  @param nidx      the index of the current error stack element
diff --git a/java/src/hdf/hdf5lib/callbacks/H5L_iterate_t.java b/java/src/hdf/hdf5lib/callbacks/H5L_iterate_t.java
index 53635bf..7342e58 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5L_iterate_t.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5L_iterate_t.java
@@ -20,6 +20,8 @@ import hdf.hdf5lib.structs.H5L_info_t;
  */
 public interface H5L_iterate_t extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each group
      *
      *  @param loc_id    the ID for the group being iterated over
diff --git a/java/src/hdf/hdf5lib/callbacks/H5O_iterate_t.java b/java/src/hdf/hdf5lib/callbacks/H5O_iterate_t.java
index ecf868c..bfe8c67 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5O_iterate_t.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5O_iterate_t.java
@@ -20,6 +20,8 @@ import hdf.hdf5lib.structs.H5O_info_t;
  */
 public interface H5O_iterate_t extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each group
      *
      *  @param loc_id    the ID for the group or dataset being iterated over
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_cls_close_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_cls_close_func_cb.java
index 0a09a94..a235861 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_cls_close_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_cls_close_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_cls_close_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param prop_id     the ID for the property list class being iterated over
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_cls_copy_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_cls_copy_func_cb.java
index 53f86be..b218e0c 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_cls_copy_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_cls_copy_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_cls_copy_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param new_prop_id   the ID for the property list copy
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_cls_create_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_cls_create_func_cb.java
index 8f4e782..3d407d0 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_cls_create_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_cls_create_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_cls_create_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param prop_id       the ID for the property list class being iterated over
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_iterate_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_iterate_cb.java
index db98a67..51a5768 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_iterate_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_iterate_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_iterate_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param plist     the ID for the property list being iterated over
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_prp_close_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_prp_close_func_cb.java
index 1aa7ce4..2ddc980 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_prp_close_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_prp_close_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_prp_close_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param name    the name of the property being closed
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_prp_compare_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_prp_compare_func_cb.java
index 49cef7d..53caa94 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_prp_compare_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_prp_compare_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_prp_compare_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param value1  the value of the first property being compared
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_prp_copy_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_prp_copy_func_cb.java
index f4924ee..0b2349e 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_prp_copy_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_prp_copy_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_prp_copy_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param name      the name of the property being copied
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_prp_create_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_prp_create_func_cb.java
index bce024b..6065ce0 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_prp_create_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_prp_create_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_prp_create_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param name      the name of the property list being created
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_prp_delete_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_prp_delete_func_cb.java
index 8c5dccc..4384ca7 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_prp_delete_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_prp_delete_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_prp_delete_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param prop_id   the ID of the property list the property is deleted from
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_prp_get_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_prp_get_func_cb.java
index 0f3457f..999c7b0 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_prp_get_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_prp_get_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_prp_get_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param prop_id   the ID for the property list being queried
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_prp_set_func_cb.java b/java/src/hdf/hdf5lib/callbacks/H5P_prp_set_func_cb.java
index a55ca3a..893344b 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_prp_set_func_cb.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_prp_set_func_cb.java
@@ -18,6 +18,8 @@ package hdf.hdf5lib.callbacks;
  */
 public interface H5P_prp_set_func_cb extends Callbacks {
     /**
+     * @ingroup JCALL
+     *
      *  application callback for each property list
      *
      *  @param prop_id   the ID for the property list being modified
diff --git a/java/src/hdf/hdf5lib/callbacks/package-info.java b/java/src/hdf/hdf5lib/callbacks/package-info.java
index 114045c..5ef3fab 100644
--- a/java/src/hdf/hdf5lib/callbacks/package-info.java
+++ b/java/src/hdf/hdf5lib/callbacks/package-info.java
@@ -12,6 +12,7 @@
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
 /**
+ * @page CALLBACKS_UG HDF5 Java Callbacks Interface
  * All callback definitions must derive from the Callbacks interface.  Any
  * derived interfaces must define a single public method named "callback".
  * You are responsible for deregistering your callback (if necessary)
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5AtomException.java b/java/src/hdf/hdf5lib/exceptions/HDF5AtomException.java
index a1473c4..280db7d 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5AtomException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5AtomException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_ATOM</b>
+ * This sub-class represents HDF5 major error code <b>H5E_ATOM</b>
  */
 
 public class HDF5AtomException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5AtomException</code> with no specified detail
      * message.
      */
     public HDF5AtomException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5AtomException</code> with the specified detail
      * message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5AttributeException.java b/java/src/hdf/hdf5lib/exceptions/HDF5AttributeException.java
index 4cb7b1d..f8b526e 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5AttributeException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5AttributeException.java
@@ -16,16 +16,20 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_ATTR</b>
+ * This sub-class represents HDF5 major error code <b>H5E_ATTR</b>
  */
 public class HDF5AttributeException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5AttributeException</code> with no specified
      * detail message.
      */
     public HDF5AttributeException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5AttributeException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5BtreeException.java b/java/src/hdf/hdf5lib/exceptions/HDF5BtreeException.java
index 9f70456..71b8e47 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5BtreeException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5BtreeException.java
@@ -16,16 +16,20 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_BTREE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_BTREE</b>
  */
 public class HDF5BtreeException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5BtreeException</code> with no specified detail
      * message.
      */
     public HDF5BtreeException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5BtreeException</code> with the specified detail
      * message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DataFiltersException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DataFiltersException.java
index b4397b7..a837708 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DataFiltersException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DataFiltersException.java
@@ -16,16 +16,20 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_PLINE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_PLINE</b>
  */
 public class HDF5DataFiltersException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DataFiltersException</code> with no specified
      * detail message.
      */
     public HDF5DataFiltersException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DataFiltersException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DataStorageException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DataStorageException.java
index f6993a8..d9f49da 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DataStorageException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DataStorageException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_STORAGE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_STORAGE</b>
  */
 
 public class HDF5DataStorageException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DataStorageExceptionn</code> with no specified
      * detail message.
      */
     public HDF5DataStorageException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DataStorageException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DatasetInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DatasetInterfaceException.java
index 8fd4ae9..fea1346 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DatasetInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DatasetInterfaceException.java
@@ -16,16 +16,20 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_DATASET</b>
+ * This sub-class represents HDF5 major error code <b>H5E_DATASET</b>
  */
 public class HDF5DatasetInterfaceException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DatasetInterfaceException</code> with no
      * specified detail message.
      */
     public HDF5DatasetInterfaceException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DatasetInterfaceException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DataspaceInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DataspaceInterfaceException.java
index d0d2a09..e2d29d0 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DataspaceInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DataspaceInterfaceException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_DATASPACE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_DATASPACE</b>
  */
 
 public class HDF5DataspaceInterfaceException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DataspaceInterfaceException</code> with no
      * specified detail message.
      */
     public HDF5DataspaceInterfaceException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DataspaceInterfaceException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DatatypeInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DatatypeInterfaceException.java
index 2ab4ff9..d7e678b 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DatatypeInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DatatypeInterfaceException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_DATATYPE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_DATATYPE</b>
  */
 
 public class HDF5DatatypeInterfaceException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DatatypeInterfaceException</code> with no
      * specified detail message.
      */
     public HDF5DatatypeInterfaceException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5DatatypeInterfaceException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5Exception.java b/java/src/hdf/hdf5lib/exceptions/HDF5Exception.java
index b098a12..ad42644 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5Exception.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5Exception.java
@@ -14,21 +14,23 @@
 package hdf.hdf5lib.exceptions;
 
 /**
- * <p>
+ * @page ERRORS Errors and Exceptions
  * The class HDF5Exception returns errors from the Java HDF5 Interface.
- * <p>
+ *
  * Two sub-classes of HDF5Exception are defined:
  * <ol>
  * <li>
- * HDF5LibraryException -- errors raised the HDF5 library code
+ * HDF5LibraryException -- errors raised by the HDF5 library code
  * <li>
- * HDF5JavaException -- errors raised the HDF5 Java wrapper code
+ * HDF5JavaException -- errors raised by the HDF5 Java wrapper code
  * </ol>
- * <p>
+ *
  * These exceptions are sub-classed to represent specific error conditions, as
  * needed. In particular, HDF5LibraryException has a sub-class for each major
  * error code returned by the HDF5 library.
  *
+ * @defgroup JERR HDF5 Library Exception Interface
+ *
  */
 public class HDF5Exception extends RuntimeException {
     /**
@@ -37,12 +39,16 @@ public class HDF5Exception extends RuntimeException {
     protected String detailMessage;
 
     /**
+     * @ingroup JERR
+     *
      * Constructs an <code>HDF5Exception</code> with no specified detail
      * message.
      */
     public HDF5Exception() { super(); }
 
     /**
+     * @ingroup JERR
+     *
      * Constructs an <code>HDF5Exception</code> with the specified detail
      * message.
      *
@@ -56,6 +62,8 @@ public class HDF5Exception extends RuntimeException {
     }
 
     /**
+     * @ingroup JERR
+     *
      * Returns the detail message of this exception
      *
      * @return the detail message or <code>null</code> if this object does not
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5ExternalFileListException.java b/java/src/hdf/hdf5lib/exceptions/HDF5ExternalFileListException.java
index c8df3d0..f9f49a1 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5ExternalFileListException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5ExternalFileListException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_EFL</b>
+ * This sub-class represents HDF5 major error code <b>H5E_EFL</b>
  */
 
 public class HDF5ExternalFileListException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5ExternalFileListException</code> with no
      * specified detail message.
      */
     public HDF5ExternalFileListException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5ExternalFileListException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5FileInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5FileInterfaceException.java
index afd6d69..3ebe63a 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5FileInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5FileInterfaceException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_FILE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_FILE</b>
  */
 
 public class HDF5FileInterfaceException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5FileInterfaceException</code> with no specified
      * detail message.
      */
     public HDF5FileInterfaceException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5FileInterfaceException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5FunctionArgumentException.java b/java/src/hdf/hdf5lib/exceptions/HDF5FunctionArgumentException.java
index 58e2980..3dc0c72 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5FunctionArgumentException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5FunctionArgumentException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_ARGS</b>
+ * This sub-class represents HDF5 major error code <b>H5E_ARGS</b>
  */
 
 public class HDF5FunctionArgumentException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5FunctionArgumentException</code> with no
      * specified detail message.
      */
     public HDF5FunctionArgumentException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5FunctionArgumentException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5FunctionEntryExitException.java b/java/src/hdf/hdf5lib/exceptions/HDF5FunctionEntryExitException.java
index db46aae..aa9289c 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5FunctionEntryExitException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5FunctionEntryExitException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_FUNC</b>
+ * This sub-class represents HDF5 major error code <b>H5E_FUNC</b>
  */
 
 public class HDF5FunctionEntryExitException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5FunctionEntryExitException</code> with no
      * specified detail message.
      */
     public HDF5FunctionEntryExitException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5FunctionEntryExitException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5HeapException.java b/java/src/hdf/hdf5lib/exceptions/HDF5HeapException.java
index 7f1691d..ba1b5ad 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5HeapException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5HeapException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_HEAP</b>
+ * This sub-class represents HDF5 major error code <b>H5E_HEAP</b>
  */
 
 public class HDF5HeapException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5HeapException</code> with no specified detail
      * message.
      */
     public HDF5HeapException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5HeapException</code> with the specified detail
      * message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5InternalErrorException.java b/java/src/hdf/hdf5lib/exceptions/HDF5InternalErrorException.java
index 4489486..31efe56 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5InternalErrorException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5InternalErrorException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_INTERNAL</b>
+ * This sub-class represents HDF5 major error code <b>H5E_INTERNAL</b>
  */
 
 public class HDF5InternalErrorException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5InternalErrorException</code> with no specified
      * detail message.
      */
     public HDF5InternalErrorException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5InternalErrorException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5JavaException.java b/java/src/hdf/hdf5lib/exceptions/HDF5JavaException.java
index ae1cf85..9b38b87 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5JavaException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5JavaException.java
@@ -14,21 +14,27 @@
 package hdf.hdf5lib.exceptions;
 
 /**
- * <p>
+ * @page ERRORSJAVA Java Wrapper Errors and Exceptions
  * The class HDF5JavaException returns errors from the Java wrapper of theHDF5
  * library.
  * <p>
  * These errors include Java configuration errors, security violations, and
  * resource exhaustion.
+ *
+ * @defgroup JERRJAVA HDF5 Library Java Exception Interface
  */
 public class HDF5JavaException extends HDF5Exception {
     /**
+     * @ingroup JERRJAVA
+     *
      * Constructs an <code>HDF5JavaException</code> with no specified detail
      * message.
      */
     public HDF5JavaException() { super(); }
 
     /**
+     * @ingroup JERRJAVA
+     *
      * Constructs an <code>HDF5JavaException</code> with the specified detail
      * message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5LibraryException.java b/java/src/hdf/hdf5lib/exceptions/HDF5LibraryException.java
index 6628cf5..3de2a28 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5LibraryException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5LibraryException.java
@@ -17,14 +17,16 @@ import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
 
 /**
- * <p>
+ * @page ERRORSLIB HDF5 Library Errors and Exceptions
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
- * <p>
- * Each major error code from the HDF-5 Library is represented by a sub-class of
+ *
+ * Each major error code from the HDF5 Library is represented by a sub-class of
  * this class, and by default the 'detailedMessage' is set according to the
- * minor error code from the HDF-5 Library.
+ * minor error code from the HDF5 Library.
  * <p>
- * For major and minor error codes, see <b>H5Epublic.h</b> in the HDF-5 library.
+ * For major and minor error codes, @see <b>@ref H5E</b> in the HDF5 library.
+ *
+ * @defgroup JERRLIB HDF5 Library JNI Exception Interface
  *
  */
 
@@ -36,6 +38,8 @@ public class HDF5LibraryException extends HDF5Exception {
     private final long minorErrorNumber;
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5LibraryException</code> with no specified detail
      * message.
      */
@@ -43,7 +47,7 @@ public class HDF5LibraryException extends HDF5Exception {
     {
         super();
 
-        // this code forces the loading of the HDF-5 library
+        // this code forces the loading of the HDF5 library
         // to assure that the native methods are available
         try {
             H5.H5open();
@@ -57,6 +61,8 @@ public class HDF5LibraryException extends HDF5Exception {
     }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5LibraryException</code> with the specified detail
      * message.
      *
@@ -66,7 +72,7 @@ public class HDF5LibraryException extends HDF5Exception {
     public HDF5LibraryException(String s)
     {
         super(s);
-        // this code forces the loading of the HDF-5 library
+        // this code forces the loading of the HDF5 library
         // to assure that the native methods are available
         try {
             H5.H5open();
@@ -78,6 +84,8 @@ public class HDF5LibraryException extends HDF5Exception {
     }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Get the major error number of the first error on the HDF5 library error
      * stack.
      *
@@ -87,6 +95,8 @@ public class HDF5LibraryException extends HDF5Exception {
     private native long _getMajorErrorNumber();
 
     /**
+     * @ingroup JERRLIB
+     *
      * Get the minor error number of the first error on the HDF5 library error
      * stack.
      *
@@ -96,9 +106,11 @@ public class HDF5LibraryException extends HDF5Exception {
     private native long _getMinorErrorNumber();
 
     /**
+     * @ingroup JERRLIB
+     *
      * Return a error message for the minor error number.
-     * <p>
-     * These messages come from <b>H5Epublic.h</b>.
+     *
+     * These messages come from <b>@ref H5E</b>.
      *
      * @param err_code
      *            the error code
@@ -349,19 +361,23 @@ public class HDF5LibraryException extends HDF5Exception {
     }
 
     /**
-     * Prints this <code>HDF5LibraryException</code>, the HDF-5 Library error
+     * @ingroup JERRLIB
+     *
+     * Prints this <code>HDF5LibraryException</code>, the HDF5 Library error
      * stack, and and the Java stack trace to the standard error stream.
      */
     @Override
     public void printStackTrace()
     {
         System.err.println(this);
-        printStackTrace0(null);  // the HDF-5 Library error stack
+        printStackTrace0(null);  // the HDF5 Library error stack
         super.printStackTrace(); // the Java stack trace
     }
 
     /**
-     * Prints this <code>HDF5LibraryException</code> the HDF-5 Library error
+     * @ingroup JERRLIB
+     *
+     * Prints this <code>HDF5LibraryException</code> the HDF5 Library error
      * stack, and and the Java stack trace to the specified print stream.
      *
      * @param f
@@ -382,14 +398,14 @@ public class HDF5LibraryException extends HDF5Exception {
             catch (Exception ex) {
                 System.err.println(this);
             };
-            // the HDF-5 Library error stack
+            // the HDF5 Library error stack
             printStackTrace0(f.getPath());
             super.printStackTrace(); // the Java stack trace
         }
     }
 
     /*
-     * This private method calls the HDF-5 library to extract the error codes
+     * This private method calls the HDF5 library to extract the error codes
      * and error stack.
      */
     private native void printStackTrace0(String s);
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5LowLevelIOException.java b/java/src/hdf/hdf5lib/exceptions/HDF5LowLevelIOException.java
index fef5721..719748e 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5LowLevelIOException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5LowLevelIOException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_IO</b>
+ * This sub-class represents HDF5 major error code <b>H5E_IO</b>
  */
 
 public class HDF5LowLevelIOException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5LowLevelIOException</code> with no specified
      * detail message.
      */
     public HDF5LowLevelIOException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5LowLevelIOException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5MetaDataCacheException.java b/java/src/hdf/hdf5lib/exceptions/HDF5MetaDataCacheException.java
index 4f00006..298d8b8 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5MetaDataCacheException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5MetaDataCacheException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_CACHE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_CACHE</b>
  */
 
 public class HDF5MetaDataCacheException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5MetaDataCacheException</code> with no specified
      * detail message.
      */
     public HDF5MetaDataCacheException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5MetaDataCacheException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5ObjectHeaderException.java b/java/src/hdf/hdf5lib/exceptions/HDF5ObjectHeaderException.java
index 9675354..b6e94be 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5ObjectHeaderException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5ObjectHeaderException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_OHDR</b>
+ * This sub-class represents HDF5 major error code <b>H5E_OHDR</b>
  */
 
 public class HDF5ObjectHeaderException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5ObjectHeaderException</code> with no specified
      * detail message.
      */
     public HDF5ObjectHeaderException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5ObjectHeaderException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5PropertyListInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5PropertyListInterfaceException.java
index 66f0bd1..68d581f 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5PropertyListInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5PropertyListInterfaceException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_PLIST</b>
+ * This sub-class represents HDF5 major error code <b>H5E_PLIST</b>
  */
 
 public class HDF5PropertyListInterfaceException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5PropertyListInterfaceException</code> with no
      * specified detail message.
      */
     public HDF5PropertyListInterfaceException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5PropertyListInterfaceException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5ReferenceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5ReferenceException.java
index 4feaba7..4c96136 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5ReferenceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5ReferenceException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_REFERENCE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_REFERENCE</b>
  */
 
 public class HDF5ReferenceException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5ReferenceException</code> with no specified
      * detail message.
      */
     public HDF5ReferenceException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5ReferenceException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5ResourceUnavailableException.java b/java/src/hdf/hdf5lib/exceptions/HDF5ResourceUnavailableException.java
index 1a007e7..f920c53 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5ResourceUnavailableException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5ResourceUnavailableException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_RESOURCE</b>
+ * This sub-class represents HDF5 major error code <b>H5E_RESOURCE</b>
  */
 
 public class HDF5ResourceUnavailableException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5ResourceUnavailableException</code> with no
      * specified detail message.
      */
     public HDF5ResourceUnavailableException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5FunctionArgumentException</code> with the
      * specified detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5SymbolTableException.java b/java/src/hdf/hdf5lib/exceptions/HDF5SymbolTableException.java
index 4fb8c2e..5d3aa90 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5SymbolTableException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5SymbolTableException.java
@@ -16,17 +16,21 @@ package hdf.hdf5lib.exceptions;
 /**
  * The class HDF5LibraryException returns errors raised by the HDF5 library.
  * <p>
- * This sub-class represents HDF-5 major error code <b>H5E_SYM</b>
+ * This sub-class represents HDF5 major error code <b>H5E_SYM</b>
  */
 
 public class HDF5SymbolTableException extends HDF5LibraryException {
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5SymbolTableException</code> with no specified
      * detail message.
      */
     public HDF5SymbolTableException() { super(); }
 
     /**
+     * @ingroup JERRLIB
+     *
      * Constructs an <code>HDF5SymbolTableException</code> with the specified
      * detail message.
      *
diff --git a/java/src/hdf/hdf5lib/exceptions/package-info.java b/java/src/hdf/hdf5lib/exceptions/package-info.java
index 8640ccb..2ac7806 100644
--- a/java/src/hdf/hdf5lib/exceptions/package-info.java
+++ b/java/src/hdf/hdf5lib/exceptions/package-info.java
@@ -12,6 +12,7 @@
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
 /**
+ * @page ERRORS_UG Errors and Exceptions
  * <p>
  * The package exceptions contains error classes for the Java HDF5 Interface.
  * <p>
diff --git a/java/src/hdf/hdf5lib/package-info.java b/java/src/hdf/hdf5lib/package-info.java
index c04b862..7ae4df9 100644
--- a/java/src/hdf/hdf5lib/package-info.java
+++ b/java/src/hdf/hdf5lib/package-info.java
@@ -12,10 +12,11 @@
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
 /**
+ @page HDF5LIB_UG HDF5 Java Package
  * This package is the Java interface for the HDF5 library.
  * <p>
- * This code is the called by Java programs to access the entry points of the HDF5 library. Each routine wraps
- a single
+ * This code is the called by Java programs to access the entry points of the HDF5 library.
+ * Each routine wraps a single
  * HDF5 entry point, generally with the arguments and return codes analogous to the C interface.
  * <p>
  * For details of the HDF5 library, see the HDF5 Documentation at:
@@ -25,14 +26,13 @@
  * <b>Mapping of arguments for Java</b>
  *
  * <p>
- * In general, arguments to the HDF Java API are straightforward translations from the 'C' API described in
- the HDF
- * Reference Manual.
+ * In general, arguments to the HDF Java API are straightforward translations from the 'C' API described
+ * in the HDF Reference Manual.
  *
  * <table border=1>
- * <caption><b>HDF-5 C types to Java types</b> </caption>
+ * <caption><b>HDF5 C types to Java types</b> </caption>
  * <tr>
- * <td><b>HDF-5</b></td>
+ * <td><b>HDF5</b></td>
  * <td><b>Java</b></td>
  * </tr>
  * <tr>
@@ -60,28 +60,27 @@
  * <td>java.lang.String</td>
  * </tr>
  * <tr>
- * <td>void * <BR>
+ * <td>void * <br />
  * (i.e., pointer to `Any')</td>
  * <td>Special -- see HDFArray</td>
  * </tr>
  * </table>
  * <b>General Rules for Passing Arguments and Results</b>
  * <p>
- * In general, arguments passed <b>IN</b> to Java are the analogous basic types, as above. The exception is
- for arrays,
- * which are discussed below.
+ * In general, arguments passed <b>IN</b> to Java are the analogous basic types, as above. The exception
+ * is for arrays, which are discussed below.
  * <p>
  * The <i>return value</i> of Java methods is also the analogous type, as above. A major exception to that
- rule is that
+ * rule is that
  * all HDF functions that return SUCCEED/FAIL are declared <i>boolean</i> in the Java version, rather than
- <i>int</i> as
+ * <i>int</i> as
  * in the C. Functions that return a value or else FAIL are declared the equivalent to the C function.
- However, in most
+ * However, in most
  * cases the Java method will raise an exception instead of returning an error code.
- * See <a href="#ERRORS">Errors and Exceptions</a> below.
+ * @see @ref ERRORS.
  * <p>
  * Java does not support pass by reference of arguments, so arguments that are returned through <b>OUT</b>
- parameters
+ * parameters
  * must be wrapped in an object or array. The Java API for HDF consistently wraps arguments in arrays.
  * <p>
  * For instance, a function that returns two integers is declared:
@@ -104,12 +103,12 @@
  *
  * <p>
  * All the routines where this convention is used will have specific documentation of the details, given
- below.
+ * below.
  * <p>
  * <b>Arrays</b>
  * <p>
  * HDF5 needs to read and write multi-dimensional arrays of any number type (and records). The HDF5 API
- describes the
+ * describes the
  * layout of the source and destination, and the data for the array passed as a block of bytes, for instance,
  *
  * <pre>
@@ -118,52 +117,52 @@
  *
  * <p>
  * where ``void *'' means that the data may be any valid numeric type, and is a contiguous block of bytes that
- is the
+ * is the
  * data for a multi-dimensional array. The other parameters describe the dimensions, rank, and datatype of the
- array on
+ * array on
  * disk (source) and in memory (destination).
  * <p>
  * For Java, this ``ANY'' is a problem, as the type of data must always be declared. Furthermore,
- multidimensional
+ * multidimensional
  * arrays are definitely <i>not</i> laid out contiguously in memory. It would be infeasible to declare a
- separate
+ * separate
  * routine for every combination of number type and dimensionality. For that reason, the
- *  <a href="./hdf.hdf5lib.HDFArray.html"><b>HDFArray</b></a> class is used to discover the type, shape, and
- size of the
+ *  <a href="./HDFArray.html"><b>HDFArray</b></a> class is used to discover the type, shape, and
+ * size of the
  * data array at run time, and to convert to and from a contiguous array of bytes in synchronized static
- native C order.
+ * native C order.
  * <p>
  * The upshot is that any Java array of numbers (either primitive or sub-classes of type <b>Number</b>) can be
- passed as
+ * passed as
  * an ``Object'', and the Java API will translate to and from the appropriate packed array of bytes needed by
- the C
+ * the C
  * library. So the function above would be declared:
  *
  * <pre>
  * public synchronized static native int H5Dread(long fid, long filetype, long memtype, long memspace, Object
- data);
+ * data);
  * </pre>
  *            OPEN_IDS.addElement(id);
 
  * and the parameter <i>data</i> can be any multi-dimensional array of numbers, such as float[][], or
- int[][][], or
+ * int[][][], or
  * Double[][].
  * <p>
- * <b>HDF-5 Constants</b>
+ * <b>HDF5 Constants</b>
  * <p>
- * The HDF-5 API defines a set of constants and enumerated values. Most of these values are available to Java
- programs
- * via the class <a href="./hdf.hdf5lib.HDF5Constants.html"> <b>HDF5Constants</b></a>. For example, the
- parameters for
+ * The HDF5 API defines a set of constants and enumerated values. Most of these values are available to Java
+ * programs
+ * via the class <a href="./HDF5Constants.html"> <b>HDF5Constants</b></a>. For example, the
+ * parameters for
  * the h5open() call include two numeric values, <b><i>HDFConstants.H5F_ACC_RDWR</i></b> and
  * <b><i>HDF5Constants.H5P_DEFAULT</i></b>. As would be expected, these numbers correspond to the C constants
  * <b><i>H5F_ACC_RDWR</i></b> and <b><i>H5P_DEFAULT</i></b>.
  * <p>
- * The HDF-5 API defines a set of values that describe number types and sizes, such as "H5T_NATIVE_INT" and
- "hsize_t".
- * These values are determined at run time by the HDF-5 C library. To support these parameters, the Java class
- * <a href="./hdf.hdf5lib.HDF5CDataTypes.html"> <b>HDF5CDataTypes</b></a> looks up the values when initiated.
- The values
+ * The HDF5 API defines a set of values that describe number types and sizes, such as "H5T_NATIVE_INT" and
+ * "hsize_t".
+ * These values are determined at run time by the HDF5 C library. To support these parameters, the Java class
+ * <a href="./HDF5CDataTypes.html"> <b>HDF5CDataTypes</b></a> looks up the values when initiated.
+ * The values
  * can be accessed as public variables of the Java class, such as:
  *
  * <pre>
@@ -175,31 +174,30 @@
  * <p>
  * <b>Error handling and Exceptions</b>
  * <p>
- * The HDF5 error API (H5E) manages the behavior of the error stack in the HDF-5 library. This API is
- available from the
+ * The HDF5 error API (H5E) manages the behavior of the error stack in the HDF5 library. This API is
+ * available from the
  * JHI5. Errors are converted into Java exceptions. This is totally different from the C interface, but is
- very natural
+ * very natural
  * for Java programming.
  * <p>
  * The exceptions of the JHI5 are organized as sub-classes of the class
- * <a href="./hdf.hdf5lib.exceptions.HDF5Exception.html"> <b>HDF5Exception</b></a>. There are two subclasses
- of
- * <b>HDF5Exception</b>, <a href="./hdf.hdf5lib.exceptions.HDF5LibraryException.html">
- <b>HDF5LibraryException</b></a>
- * and <a href="./hdf.hdf5lib.exceptions.HDF5JavaException.html"> <b>HDF5JavaException</b></a>. The
- sub-classes of the
- * former represent errors from the HDF-5 C library, while sub-classes of the latter represent errors in the
- JHI5
- * wrapper and support code.
- * <p>
- * The super-class <b><i>HDF5LibraryException</i></b> implements the method '<b><i>printStackTrace()</i></b>',
- which
- * prints out the HDF-5 error stack, as described in the HDF-5 C API <i><b>H5Eprint()</b>.</i> This may be
- used by Java
- * exception handlers to print out the HDF-5 error stack.
+ * <a href="./HDF5Exception.html"> <b>HDF5Exception</b></a>. There are two subclasses
+ * of
+ * <b>HDF5Exception</b>, @ref ERRORSLIB <b>HDF5LibraryException</b>
+ * and @ref ERRORSJAVA <b>HDF5JavaException</b>.
+ * The sub-classes of the former represent errors from the HDF5 C library,
+ * while sub-classes of the latter represent errors in the JHI5 wrapper and support code.
+ * <p>
+ * The super-class <b><i>HDF5LibraryException</i></b> implements the method
+ * '<b><i>printStackTrace()</i></b>', which prints out the HDF5 error stack, as described
+ *  in the HDF5 C API <i><b>@ref H5Eprint()</b>.</i> This may be
+ * used by Java
+ * exception handlers to print out the HDF5 error stack.
  * <hr>
  *
- * <b>See also: <a href="http://hdfgroup.org/HDF5/"> http://hdfgroup.org/HDF5"</a></b>
+ * @ref HDF5LIB
+ *
+ * <b>@see: <a href="http://hdfgroup.org/HDF5/"> HDF5"</a></b>
  *
  */
 package hdf.hdf5lib;
diff --git a/java/src/hdf/overview.html b/java/src/hdf/overview.html
index f181510..e059606 100644
--- a/java/src/hdf/overview.html
+++ b/java/src/hdf/overview.html
@@ -4,7 +4,7 @@
 
 <h2><u>What it is</u></h2>
 The <b>Java HD5 Interface (JHI5)</b> is a Java package
-(<a href="../../hdf-java-html/javadocs/hdf/hdf5lib/package-summary.html">hdf.hdf5lib</a>)
+(<a href="./hdf/hdf5lib/package-summary.html">hdf.hdf5lib</a>)
 that ``wraps around'' the HDF5 library.
 <p>There are a large number of functions in the HDF5
 library (version 1.12). Some of the functions are not supported in JHI5. Most
@@ -32,7 +32,7 @@ library contains C functions which implement the native methods. The C
 functions call the standard HDF5 library, which is linked as part of the
 same library on most platforms.
 <p>The central part of the JHI5 is the Java class <i>
-<a href="../../hdf-java-html/javadocs/hdf/hdf5lib/H5.html">hdf.hdf5lib.H5</a></i>.
+<a href="./hdf/hdf5lib/H5.html">hdf.hdf5lib.H5</a></i>.
 The <i>H5 </i>class calls the standard (<i>i.e.</i>, `native' code) HDF5
 library, with native methods for most of the HDF5 functions.
 
@@ -42,11 +42,11 @@ The JHI5 is used by Java classes to call the HDF5 library, in order to
 create HDF5 files, and read and write data in existing HDF5 files.
 <p>For example, the HDF5 library has the function <b>H5Fopen</b> to open
 an HDF5 file. The Java interface is the class <i>
-<a href="../../hdf-java-html/javadocs/hdf/hdf5lib/H5.html">hdf.hdf5lib.H5</a></i>,
+<a href="./hdf/hdf5lib/H5.html">hdf.hdf5lib.H5</a></i>,
 which has a method:
 <pre><b>static native int H5Fopen(String filename, int flags, int access );</b></pre>
 The native method is implemented in C using the
-<a href="http://java.sun.com/javase/6/docs/technotes/guides/jni/index.html">Java
+<a href="https://docs.oracle.com/en/java/javase/18/docs/specs/jni/index.html">Java
 Native Method Interface </a>(JNI). This is written something like the following:
 <pre><b>JNIEXPORT jlong
 JNICALL Java_hdf_hdf5lib_H5_H5Fopen
diff --git a/java/src/jni/exceptionImp.c b/java/src/jni/exceptionImp.c
index a772ae2..1d27e1b 100644
--- a/java/src/jni/exceptionImp.c
+++ b/java/src/jni/exceptionImp.c
@@ -153,7 +153,7 @@ Java_hdf_hdf5lib_H5_H5error_1on(JNIEnv *env, jclass clss)
  * Method:    printStackTrace0
  * Signature: (Ljava/lang/Object;)V
  *
- *  Call the HDF-5 library to print the HDF-5 error stack to 'file_name'.
+ *  Call the HDF5 library to print the HDF5 error stack to 'file_name'.
  */
 JNIEXPORT void JNICALL
 Java_hdf_hdf5lib_exceptions_HDF5LibraryException_printStackTrace0(JNIEnv *env, jobject obj, jstring file_name)
@@ -187,7 +187,7 @@ done:
  * Method:    _getMajorErrorNumber
  * Signature: ()J
  *
- *  Extract the HDF-5 major error number from the HDF-5 error stack.
+ *  Extract the HDF5 major error number from the HDF5 error stack.
  */
 JNIEXPORT jlong JNICALL
 Java_hdf_hdf5lib_exceptions_HDF5LibraryException__1getMajorErrorNumber(JNIEnv *env, jobject obj)
@@ -211,7 +211,7 @@ Java_hdf_hdf5lib_exceptions_HDF5LibraryException__1getMajorErrorNumber(JNIEnv *e
  * Method:    _getMinorErrorNumber
  * Signature: ()J
  *
- *  Extract the HDF-5 minor error number from the HDF-5 error stack.
+ *  Extract the HDF5 minor error number from the HDF5 error stack.
  */
 JNIEXPORT jlong JNICALL
 Java_hdf_hdf5lib_exceptions_HDF5LibraryException__1getMinorErrorNumber(JNIEnv *env, jobject obj)
@@ -350,10 +350,10 @@ h5raiseException(JNIEnv *env, const char *message, const char *exception)
 } /* end h5raiseException() */
 
 /*
- *  h5libraryError()   determines the HDF-5 major error code
+ *  h5libraryError()   determines the HDF5 major error code
  *  and creates and throws the appropriate sub-class of
  *  HDF5LibraryException().  This routine should be called
- *  whenever a call to the HDF-5 library fails, i.e., when
+ *  whenever a call to the HDF5 library fails, i.e., when
  *  the return is -1.
  *
  *  Note:  This routine never returns from the 'throw',
@@ -436,7 +436,7 @@ done:
 
 /*
  *  defineHDF5LibraryException()  returns the name of the sub-class
- *  which goes with an HDF-5 error code.
+ *  which goes with an HDF5 error code.
  */
 static const char *
 defineHDF5LibraryException(hid_t maj_num)
diff --git a/java/src/jni/exceptionImp.h b/java/src/jni/exceptionImp.h
index 38469df..c7375e7 100644
--- a/java/src/jni/exceptionImp.h
+++ b/java/src/jni/exceptionImp.h
@@ -41,7 +41,7 @@ JNIEXPORT void JNICALL Java_hdf_hdf5lib_H5_H5error_1on(JNIEnv *env, jclass clss)
  * Method:    printStackTrace0
  * Signature: (Ljava/lang/Object;)V
  *
- *  Call the HDF-5 library to print the HDF-5 error stack to 'file_name'.
+ *  Call the HDF5 library to print the HDF5 error stack to 'file_name'.
  */
 JNIEXPORT void JNICALL Java_hdf_hdf5lib_exceptions_HDF5LibraryException_printStackTrace0(JNIEnv *env,
                                                                                          jobject obj,