HDFFV-10876 Update h5dump and h5ls for new ref api.

1 files changed, 359 insertions, 12 deletions

diff --git a/java/test/TestH5R.java b/java/test/TestH5R.java
index 5349855..0c307d1 100644
--- a/java/test/TestH5R.java
+++ b/java/test/TestH5R.java
@@ -24,6 +24,7 @@ import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
 import hdf.hdf5lib.exceptions.HDF5Exception;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
+import hdf.hdf5lib.exceptions.HDF5FunctionArgumentException;
 
 import org.junit.After;
 import org.junit.Before;
@@ -42,6 +43,8 @@ public class TestH5R {
     long H5gid = -1;
     long H5did2 = -1;
     long[] H5dims = { DIM_X, DIM_Y };
+    int[][] dset_data = new int[DIM_X][DIM_Y];
+    int FILLVAL = 99;
 
     private final void _deleteFile(String filename) {
         File file = null;
@@ -66,7 +69,7 @@ public class TestH5R {
             err.printStackTrace();
             fail("H5.H5Dcreate: " + err);
         }
-        assertTrue("TestH5R._createDataset: ",did > 0);
+        assertTrue("TestH5R._createDataset: ", did > 0);
 
         return did;
     }
@@ -100,6 +103,21 @@ public class TestH5R {
             H5did2 = _createDataset(H5gid, H5dsid, "dset2", HDF5Constants.H5P_DEFAULT);
             H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
 
+            // Initialize the dataset.
+            for (int indx = 0; indx < DIM_X; indx++)
+                for (int jndx = 0; jndx < DIM_Y; jndx++)
+                    dset_data[indx][jndx] = FILLVAL;
+
+            try {
+                if (H5did >= 0)
+                    H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_INT,
+                            HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                            HDF5Constants.H5P_DEFAULT, dset_data[0]);
+            }
+            catch (Exception e) {
+                e.printStackTrace();
+            }
+
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -129,13 +147,15 @@ public class TestH5R {
         System.out.println();
     }
 
+    // Test v1.8 APIs params
+
     @Test
     public void testH5Rget_name() {
-        long loc_id=H5fid;
-        int ref_type=HDF5Constants.H5R_OBJECT;
-        long ret_val=-1;
-        byte[] ref=null;
-        String[] name= {""};
+        long loc_id = H5fid;
+        int ref_type = HDF5Constants.H5R_OBJECT;
+        long ret_val = -1;
+        byte[] ref = null;
+        String[] name = {""};
         String objName = "/dset";
 
         try {
@@ -164,7 +184,7 @@ public class TestH5R {
         byte[] ref=null;
 
         String objName = "/dset";
-        int obj_type = -1;;
+        int obj_type = -1;
 
         try {
             ref = H5.H5Rcreate(H5fid, objName, ref_type, -1);
@@ -226,8 +246,8 @@ public class TestH5R {
             group_id= H5.H5Rdereference(H5gid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, ref2);
             assertNotNull(ref1);
             assertNotNull(ref2);
-            assertTrue(dataset_id>=0);
-            assertTrue(group_id>=0);
+            assertTrue(dataset_id >= 0);
+            assertTrue(group_id >= 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -247,7 +267,7 @@ public class TestH5R {
             ref = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, H5dsid);
             dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
             assertNotNull(ref);
-            assertTrue(dsid>=0);
+            assertTrue(dsid >= 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -261,7 +281,7 @@ public class TestH5R {
     @Test(expected = IllegalArgumentException.class)
     public void testH5Rget_name_Invalidreftype() throws Throwable {
         byte[] ref = null;
-        String[] name= {""};
+        String[] name = {""};
         ref = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_OBJECT, -1);
         H5.H5Rget_name(H5fid, HDF5Constants.H5R_DATASET_REGION, ref, name, 16);
     }
@@ -269,7 +289,7 @@ public class TestH5R {
     @Test(expected = NullPointerException.class)
     public void testH5Rget_name_NULLreference() throws Throwable {
         byte[] ref = null;
-        String[] name= {""};
+        String[] name = {""};
         H5.H5Rget_name(H5fid, HDF5Constants.H5R_OBJECT, ref, name, 16);
     }
 
@@ -330,4 +350,331 @@ public class TestH5R {
         H5.H5Rdereference(H5gid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, ref1);
     }
 
+    // Test v1.12 APIs params
+
+    @Test
+    public void testH5Rget_object() {
+        int ref_type = HDF5Constants.H5R_OBJECT2;
+        long ret_val = -1;
+        byte[] ref = null;
+        String name = "";
+        String objName = "/dset";
+
+        try {
+            ref = H5.H5Rcreate_object(H5fid, objName);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Rget_object: H5Rcreate_object " + err);
+        }
+
+        try {
+            ret_val = H5.H5Rget_type(ref);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Rget_object: H5Rget_type: " + err);
+        }
+        assertTrue("testH5Rget_object: H5Rget_type", ret_val == ref_type);
+
+        try {
+            name = H5.H5Rget_file_name(ref);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Rget_object: H5Rget_file_name: " + err);
+        }
+        assertTrue("testH5Rget_object: H5Rget_file_name", H5_FILE.equals(name));
+
+        try {
+            name = H5.H5Rget_obj_name(ref, HDF5Constants.H5P_DEFAULT);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Rget_object: H5Rget_obj_name: " + err);
+        }
+        assertTrue("The name of the object: ", objName.equals(name));
+    }
+
+    @Test
+    public void testH5Rget_obj_type3() {
+        int obj_type = -1;
+        byte[] ref = null;
+        String objName = "/dset";
+
+        try {
+            ref = H5.H5Rcreate_object(H5fid, objName);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Rget_obj_type3: H5Rcreate_object " + err);
+        }
+
+        try {
+            obj_type = H5.H5Rget_obj_type3(ref, HDF5Constants.H5P_DEFAULT);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Rget_obj_type3: H5.H5Rget_obj_type3: " + err);
+        }
+        assertEquals(obj_type, HDF5Constants.H5O_TYPE_DATASET);
+    }
+
+    @Test
+    public void testH5Rcreate_regionref_object() {
+        byte[] ref = null;
+        String objName = "/dset";
+        long start[] = {2,2};     // Starting location of hyperslab
+        long stride[] = {1,1};    // Stride of hyperslab
+        long count[] = {1,1};     // Element count of hyperslab
+        long block[] = {3,3};     // Block size of hyperslab
+
+        // Select 3x3 hyperslab for reference
+        try {
+            H5.H5Sselect_hyperslab(H5dsid, HDF5Constants.H5S_SELECT_SET, start, stride, count, block);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Rget_object: H5Sselect_hyperslab " + err);
+        }
+        try {
+            ref = H5.H5Rcreate_region(H5fid, objName, H5dsid);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Rget_object: H5Rcreate_region " + err);
+        }
+        assertNotNull(ref);
+    }
+
+//    @Test//
+//    public void testH5Rget_group() {
+//        long loc_id = H5fid;
+//        int ref_type = HDF5Constants.H5R_OBJECT2;
+//        long ret_val = -1;
+//        byte[] ref = null;
+//        String name = "";
+//        String objName = "/dset";
+//
+//        try {
+//            ref = H5.H5Rcreate_object(H5fid, objName);
+//        }
+//        catch (Throwable err) {
+//            err.printStackTrace();
+//            fail("testH5Rget_object: H5Rcreate_object " + err);
+//        }
+//        try {
+//            dataset_id= H5.H5Rdereference(H5fid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_DATASET_REGION, ref1);
+//
+//            //Create reference on group
+//            ref2 = H5.H5Rcreate(H5gid, "/Group1", HDF5Constants.H5R_OBJECT, -1);
+//            group_id= H5.H5Rdereference(H5gid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, ref2);
+//            assertNotNull(ref1);
+//            assertNotNull(ref2);
+//            assertTrue(dataset_id >= 0);
+//            assertTrue(group_id >= 0);
+//        }
+//        catch (Throwable err) {
+//            err.printStackTrace();
+//            fail("TestH5Rdereference " + err);
+//        }
+//        finally {
+//            try {H5.H5Dclose(dataset_id);} catch (Exception ex) {}
+//            try {H5.H5Gclose(group_id);} catch (Exception ex) {}
+//        }
+//    }
+
+//    @Test//
+//    public void testH5Rget_region_dataset() {
+//        long loc_id = H5fid;
+//        int ref_type = HDF5Constants.H5R_OBJECT2;
+//        long ret_val = -1;
+//        byte[] ref = null;
+//        String name = "";
+//        String objName = "/dset";
+//
+//        try {
+//            ref = H5.H5Rcreate_object(H5fid, objName);
+//        }
+//        catch (Throwable err) {
+//            err.printStackTrace();
+//            fail("testH5Rget_object: H5Rcreate_object " + err);
+//        }
+//        try {
+//            dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
+//            assertNotNull(ref);
+//            assertTrue(dsid >= 0);
+//        }
+//        catch (Throwable err) {
+//            err.printStackTrace();
+//            fail("TestH5Rget_region: " + err);
+//        }
+//        finally {
+//            try {H5.H5Sclose(dsid);} catch (Exception ex) {}
+//        }
+//    }
+
+//    @Test//
+//    public void testH5Rget_attr() {
+//        long loc_id = H5fid;
+//        int ref_type = HDF5Constants.H5R_OBJECT2;
+//        long ret_val = -1;
+//        byte[] ref = null;
+//        String name = "";
+//        String objName = "/dset";
+//
+//        try {
+//            ref = H5.H5Rcreate_object(H5fid, objName);
+//        }
+//        catch (Throwable err) {
+//            err.printStackTrace();
+//            fail("testH5Rget_object: H5Rcreate_object " + err);
+//        }
+//        try {
+//            dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
+//            assertNotNull(ref);
+//            assertTrue(dsid >= 0);
+//        }
+//        catch (Throwable err) {
+//            err.printStackTrace();
+//            fail("TestH5Rget_region: " + err);
+//        }
+//        finally {
+//            try {H5.H5Sclose(dsid);} catch (Exception ex) {}
+//        }
+//    }
+
+    // Test parameters to H5Rcreate_object
+    @Test(expected = NullPointerException.class)
+    public void testH5Rcreate_object_Nullname() throws Throwable {
+        String name = null;
+        H5.H5Rcreate_object(H5fid, name);
+    }
+
+    @Test(expected = HDF5FunctionArgumentException.class)
+    public void testH5Rget_name_Invalidloc() throws Throwable {
+        String name= "";
+        H5.H5Rcreate_object(-1, name);
+    }
+
+    // Test parameters to H5Rcreate_region
+    @Test(expected = NullPointerException.class)
+    public void testH5Rcreate_region_Nullname() throws Throwable {
+        String name = null;
+        H5.H5Rcreate_region(H5fid, name, -1);
+    }
+
+    @Test(expected = HDF5FunctionArgumentException.class)
+    public void testH5Rcreate_region_Invalidloc() throws Throwable {
+        String name= "";
+        H5.H5Rcreate_region(-1, name, -1);
+    }
+
+    // Test parameters to H5Rcreate_attr
+    @Test(expected = NullPointerException.class)
+    public void testH5Rcreate_attr_Nullname() throws Throwable {
+        String name = null;
+        String attrname = "";
+        H5.H5Rcreate_attr(H5fid, name, attrname);
+    }
+
+    @Test(expected = NullPointerException.class)
+    public void testH5Rcreate_attr_Nullattrname() throws Throwable {
+        String name = "";
+        String attrname = null;
+        H5.H5Rcreate_attr(H5fid, name, attrname);
+    }
+
+    @Test(expected = HDF5FunctionArgumentException.class)
+    public void testH5Rcreate_attr_Invalidloc() throws Throwable {
+        String name= "";
+        String attrname= "";
+        H5.H5Rcreate_attr(-1, name, attrname);
+    }
+
+    // Test parameters to H5Rdestroy
+    @Test(expected = NullPointerException.class)
+    public void testH5Rdestroy_Nullref() throws Throwable {
+        byte[] ref = null;
+        H5.H5Rdestroy(ref);
+    }
+
+    // Test parameters to H5Rget_type
+    @Test(expected = NullPointerException.class)
+    public void testH5Rget_type_Nullref() throws Throwable {
+        byte[] ref = null;
+        H5.H5Rget_type(ref);
+    }
+
+    // Test parameters to H5Requal
+    @Test(expected = NullPointerException.class)
+    public void testH5Requal_Nullref1() throws Throwable {
+        byte[] ref1 = null;
+        byte[] ref2 = {0,0,0,0};
+        H5.H5Requal(ref1, ref2);
+    }
+
+    @Test(expected = NullPointerException.class)
+    public void testH5Requal_Nullref2() throws Throwable {
+        byte[] ref1 = {0,0,0,0};
+        byte[] ref2 = null;
+        H5.H5Requal(ref1, ref2);
+    }
+
+    // Test parameters to H5Rcopy
+    @Test(expected = NullPointerException.class)
+    public void testH5Rcopy_Nullref1() throws Throwable {
+        byte[] ref1 = null;
+        byte[] ref2 = H5.H5Rcopy(ref1);
+    }
+
+    // Test parameters to H5Ropen_object
+    @Test(expected = NullPointerException.class)
+    public void testH5Ropen_object_Nullref() throws Throwable {
+        byte[] ref = null;
+        H5.H5Ropen_object(ref, -1, -1);
+    }
+
+    // Test parameters to H5Ropen_region
+    @Test(expected = NullPointerException.class)
+    public void testH5Ropen_region_Nullref() throws Throwable {
+        byte[] ref = null;
+        H5.H5Ropen_region(ref, -1, -1);
+    }
+
+    // Test parameters to H5Ropen_attr
+    @Test(expected = NullPointerException.class)
+    public void testH5Ropen_attr_Nullref() throws Throwable {
+        byte[] ref = null;
+        H5.H5Ropen_attr(ref, -1, -1);
+    }
+
+    // Test parameters to H5Rget_obj_type3
+    @Test(expected = NullPointerException.class)
+    public void testH5Rget_obj_type3_Nullref() throws Throwable {
+        byte[] ref = null;
+        H5.H5Rget_obj_type3(ref, -1);
+    }
+
+    // Test parameters to H5Rget_file_name
+    @Test(expected = NullPointerException.class)
+    public void testH5Rget_file_name_Nullref() throws Throwable {
+        byte[] ref = null;
+        H5.H5Rget_file_name(ref);
+    }
+
+    // Test parameters to H5Rget_obj_name
+    @Test(expected = NullPointerException.class)
+    public void testH5Rget_obj_name_Nullref() throws Throwable {
+        byte[] ref = null;
+        H5.H5Rget_obj_name(ref, -1);
+    }
+
+    // Test parameters to H5Rget_attr_name
+    @Test(expected = NullPointerException.class)
+    public void testH5Rget_attr_name_Nullref() throws Throwable {
+        byte[] ref = null;
+        H5.H5Rget_attr_name(ref);
+    }
+
 }