diff options
author | Elena Pourmal <epourmal@hdfgroup.org> | 2005-01-20 22:50:40 (GMT) |
---|---|---|
committer | Elena Pourmal <epourmal@hdfgroup.org> | 2005-01-20 22:50:40 (GMT) |
commit | 2cd3b4c609eb07baaa0f795983fd2ac85a7d9579 (patch) | |
tree | d49d88116f2ab7c165a9b67f31c00d966b2c7845 /pablo | |
parent | e4394cd2fb18ed8ca6f38dc3d8fb534a24a289c4 (diff) | |
download | hdf5-2cd3b4c609eb07baaa0f795983fd2ac85a7d9579.zip hdf5-2cd3b4c609eb07baaa0f795983fd2ac85a7d9579.tar.gz hdf5-2cd3b4c609eb07baaa0f795983fd2ac85a7d9579.tar.bz2 |
[svn-r9852] Purpose: Maintenance
Description: Removed PABLO instrumentation from HDF5 source
Solution:
Platforms tested: arabica, copper (parallel), mir
Misc. update:
Diffstat (limited to 'pablo')
-rw-r--r-- | pablo/HDFIOTrace.h | 423 | ||||
-rw-r--r-- | pablo/HDFTrace.h | 173 | ||||
-rw-r--r-- | pablo/HDFmpioProtos.h | 77 | ||||
-rw-r--r-- | pablo/HDFrecord_RT.h | 215 | ||||
-rw-r--r-- | pablo/Makefile.in | 314 | ||||
-rw-r--r-- | pablo/PabloHDF.c | 1416 | ||||
-rw-r--r-- | pablo/PabloHDF_MPIO.c | 1366 | ||||
-rw-r--r-- | pablo/PabloHDF_RT.c | 1686 | ||||
-rw-r--r-- | pablo/PabloHDF_SDDF.c | 820 | ||||
-rw-r--r-- | pablo/PabloHDFff.f | 62 | ||||
-rw-r--r-- | pablo/PabloSedscr | 31 | ||||
-rw-r--r-- | pablo/ProcIDs.h | 165 | ||||
-rw-r--r-- | pablo/ProcTrace.h | 108 | ||||
-rw-r--r-- | pablo/READ_ME | 18 |
14 files changed, 0 insertions, 6874 deletions
diff --git a/pablo/HDFIOTrace.h b/pablo/HDFIOTrace.h deleted file mode 100644 index 4c88403..0000000 --- a/pablo/HDFIOTrace.h +++ /dev/null @@ -1,423 +0,0 @@ -/* - * This file is part of the Pablo Performance Analysis Environment - * - * (R) - * The Pablo Performance Analysis Environment software is NOT in - * the public domain. However, it is freely available without fee for - * education, research, and non-profit purposes. By obtaining copies - * of this and other files that comprise the Pablo Performance Analysis - * Environment, you, the Licensee, agree to abide by the following - * conditions and understandings with respect to the copyrighted software: - * - * 1. The software is copyrighted in the name of the Board of Trustees - * of the University of Illinois (UI), and ownership of the software - * remains with the UI. - * - * 2. Permission to use, copy, and modify this software and its documentation - * for education, research, and non-profit purposes is hereby granted - * to Licensee, provided that the copyright notice, the original author's - * names and unit identification, and this permission notice appear on - * all such copies, and that no charge be made for such copies. Any - * entity desiring permission to incorporate this software into commercial - * products should contact: - * - * Professor Daniel A. Reed reed@cs.uiuc.edu - * University of Illinois - * Department of Computer Science - * 2413 Digital Computer Laboratory - * 1304 West Springfield Avenue - * Urbana, Illinois 61801 - * USA - * - * 3. Licensee may not use the name, logo, or any other symbol of the UI - * nor the names of any of its employees nor any adaptation thereof in - * advertizing or publicity pertaining to the software without specific - * prior written approval of the UI. - * - * 4. THE UI MAKES NO REPRESENTATIONS ABOUT THE SUITABILITY OF THE - * SOFTWARE FOR ANY PURPOSE. IT IS PROVIDED "AS IS" WITHOUT EXPRESS - * OR IMPLIED WARRANTY. - * - * 5. The UI shall not be liable for any damages suffered by Licensee from - * the use of this software. - * - * 6. The software was developed under agreements between the UI and the - * Federal Government which entitle the Government to certain rights. - * - ************************************************************************** - * - * Developed by: The Pablo Research Group - * University of Illinois at Urbana-Champaign - * Department of Computer Science - * 1304 W. Springfield Avenue - * Urbana, IL 61801 - * - * http://www-pablo.cs.uiuc.edu - * - * Send comments to: pablo-feedback@guitar.cs.uiuc.edu - * - * Copyright (c) 1991-1996 - * The University of Illinois Board of Trustees. - * All Rights Reserved. - * - * PABLO is a registered trademark of - * The Board of Trustees of the University of Illinois - * registered in the U.S. Patent and Trademark Office. - * - * Author: Ruth A. Aydt (aydt@cs.uiuc.edu) - * Author: Tara M. Madhyastha (tara@cs.uiuc.edu) - * - * Project Manager and Principal Investigator: - * Daniel A. Reed (reed@cs.uiuc.edu) - * - * Funded in part by National Science Foundation grants NSF CCR87-06653 - * and NSF CDA87-22836 (Tapestry), DARPA contracts DABT63-91-K-0004, - * DABT63-93-C-0040, DABT63-94-C-0049 (SIO), and F30602-96-C-0161, NASA - * contracts NAG-1-613 (ICLASS), USRA 5555-22, and NGT-51023, and a - * collaborative research agreement with the Intel Supercomputer - * Systems Division - */ - -/* - * HDFIOTrace.h: This header file can be included in c source files to - * automatically redefine the I/O function calls to the - * tracing versions when "IOTRACE" is defined. - * - * It also contains function declarations for the I/O trace - * routines called from user code and constant values that may - * be needed by the user. - * - */ -#ifndef HDFIOTrace_h -#define HDFIOTrace_h - - -/************************************************************************/ -/* These defines and the external variable OUTPUT_SWITCH are used in */ -/* for HDF and MPI-IO tracing to govern the type of output produced. */ -/************************************************************************/ -extern int OUTPUT_SWITCH; /* default is SDDF records */ - -#if defined(__STDC__) || defined(__cplusplus) -#define PROTO(x) x -#else -#define PROTO(x) () -#endif - -#ifdef __cplusplus -extern "C" { -#endif - -/* #include <stdio.h> */ -#include <sys/types.h> - -void startHDFtraceEvent (int ); -void endHDFtraceEvent (int , int , char *, int ); - -FILE *HDFtraceFOPEN( const char *filename, const char *type ) ; -#ifndef HDFtrace3OPEN__ - int HDFtrace3OPEN( const char *path, int flags, ... ) ; -#endif -int HDFtraceCREAT( const char *path, mode_t mode ); -int HDFtraceFFLUSH( FILE *stream ) ; -int HDFtraceFCLOSE( FILE *stream ) ; -int HDFtraceCLOSE( int fd ) ; -ssize_t HDFtraceREAD( int fd, void *buf, size_t nbyte ); -size_t HDFtraceFREAD( void *ptr, size_t size, size_t nitems, FILE *stream ); -void *HDFtraceMALLOC( size_t ); -off_t HDFtraceLSEEK( int fd, off_t offset, int whence ) ; -int HDFtraceFSEEK( FILE *stream, long offset, int whence ) ; -int HDFtraceFSETPOS( FILE *stream, const fpos_t *position ) ; -void HDFtraceREWIND( FILE *stream ) ; -ssize_t HDFtraceWRITE( int fd, const void *buf, size_t nbytes ); -size_t HDFtraceFWRITE( const void *, size_t , size_t , FILE * ); -int HDFtracePUTS( const char *s ) ; -int HDFtraceFPUTC( int c, FILE *stream ) ; -int HDFtraceFPUTS( const char *s, FILE *stream ) ; - -#ifdef HDFIOTRACE -/* - * If IOTRACE is defined, then redefine standard I/O routines to tracing - * versions. Also include the appropriate .h files so the function - * declarations from them will be redefined to traced versions. - */ - -#ifdef fopen -# undef fopen -#endif -#ifdef open -# undef open -#endif -#ifdef creat -# undef creat -#endif - -#ifdef fflush -# undef fflush -#endif -#ifdef fclose -# undef fclose -#endif -#ifdef close -# undef close -#endif - -#ifdef read -# undef read -#endif -#ifdef fread -# undef fread -#endif -#ifdef fgetc -# undef fgetc -#endif -#ifdef fgets -# undef fgets -#endif -#ifdef gets -# undef gets -#endif -#ifdef getw -# undef getw -#endif - -#ifdef lseek -# undef lseek -#endif -#ifdef fseek -# undef fseek -#endif -#ifdef rewind -# undef rewind -#endif -#ifdef fsetpos -# undef fsetpos -#endif - -#ifdef write -# undef write -#endif -#ifdef fwrite -# undef fwrite -#endif -#ifdef fputc -# undef fputc -#endif -#ifdef fputs -# undef fputs -#endif -#ifdef puts -# undef puts -#endif -#ifdef putw -# undef putw -#endif - -#ifdef malloc -# undef malloc -#endif - -#define fopen (FILE *)HDFtraceFOPEN -#define open HDFtrace3OPEN -#define creat HDFtraceCREAT - -#define fflush HDFtraceFFLUSH -#define fclose HDFtraceFCLOSE -#define close HDFtraceCLOSE - -#define read HDFtraceREAD -#define fread HDFtraceFREAD -#define fgetc HDFtraceFGETC -#define fgets HDFtraceFGETS -#define gets HDFtraceGETS -#define getw HDFtraceGETW - -#define lseek HDFtraceLSEEK -#define fseek HDFtraceFSEEK -#define rewind HDFtraceREWIND -#define fsetpos HDFtraceFSETPOS - -#define write HDFtraceWRITE -#define fwrite HDFtraceFWRITE -#define fputc HDFtraceFPUTC -#define fputs HDFtraceFPUTS -#define puts HDFtracePUTS -#define putw HDFtracePUTW - -#define malloc HDFtraceMALLOC - -#include <stdio.h> -#include <fcntl.h> - -/* - * On the iPSC/860 we don't include unistd.h or we get warnings about - * SEEK_* multiply defined. - */ -#ifndef __NX -#include <unistd.h> -#endif - - -#include <stdio.h> -/* - * Function declarations for routines that can be called from user code. - */ -void enableIOtracing( void ); -void disableIOtracing( void ); - -void enableIOdetail( void ); -void disableIOdetail( void ); - -void enableLifetimeSummaries( void ); -void disableLifetimeSummaries( void ); - -void enableTimeWindowSummaries ( double ); -void disableTimeWindowSummaries( void ); -void setTimeWindowSize ( double ); -void outputTimeWindowSummaries( void ); - -void enableFileRegionSummaries ( int ); -void disableFileRegionSummaries( void ); -void setFileRegionSize ( int ); -void outputFileRegionSummaries( void ); - -int HDFtrace2OPEN ( char*, int ); -void HDFtraceReadBegin ( int, int, int ); -void HDFtraceReadEnd ( int ); -void HDFtraceWriteBegin ( int, int, int ); -void HDFtraceWriteEnd ( int ); -void HDFtraceIOBegin ( int, int ); -void HDFtraceIOEnd ( int, double, char * ); - -#ifdef H5_HAVE_PARALLEL - -#include "HDFmpioProtos.h" - -/* -#ifdef MPI_File_open -#undef MPI_File_open -#endif -#ifdef MPI_File_close -#undef MPI_File_close -#endif -#ifdef MPI_File_delete -#undef MPI_File_delete -#endif -#ifdef MPI_File_set_size -#undef MPI_File_set_size -#endif -#ifdef MPI_File_preallocate -#undef MPI_File_preallocate -#endif -#ifdef MPI_File_get_size -#undef MPI_File_get_size -#endif -#ifdef MPI_File_get_group -#undef MPI_File_get_group -#endif -#ifdef MPI_File_get_amode -#undef MPI_File_get_amode -#endif -#ifdef MPI_File_set_view -#undef MPI_File_set_view -#endif -#ifdef MPI_File_get_view -#undef MPI_File_get_view -#endif -#ifdef MPI_File_read_at -#undef MPI_File_read_at -#endif -#ifdef MPI_File_read_at_all -#undef MPI_File_read_at_all -#endif -#ifdef MPI_File_write_at -#undef MPI_File_write_at -#endif -#ifdef MPI_File_write_at_all -#undef MPI_File_write_at_all -#endif -#ifdef MPI_File_iread_at -#undef MPI_File_iread_at -#endif -#ifdef MPI_File_iwrite_at -#undef MPI_File_iwrite_at -#endif -#ifdef MPI_File_read -#undef MPI_File_read -#endif -#ifdef MPI_File_read_all -#undef MPI_File_read_all -#endif -#ifdef MPI_File_write -#undef MPI_File_write -#endif -#ifdef MPI_File_write_all -#undef MPI_File_write_all -#endif -#ifdef MPI_File_iread -#undef MPI_File_iread -#endif -#ifdef MPI_File_iwrite -#undef MPI_File_iwrite -#endif -#ifdef MPI_File_seek -#undef MPI_File_seek -#endif -#ifdef MPI_File_get_position -#undef MPI_File_get_position -#endif -#ifdef MPI_File_get_byte_offset -#undef MPI_File_get_byte_offset -#endif -#ifdef MPI_File_get_type_extent -#undef MPI_File_get_type_extent -#endif -#ifdef MPI_File_set_atomicity -#undef MPI_File_set_atomicity -#endif -#ifdef MPI_File_get_atomicity -#undef MPI_File_get_atomicity -#endif -#ifdef MPI_File_sync -#undef MPI_File_sync -#endif - -#define MPI_File_open HDF_MPI_File_open -#define MPI_File_close HDF_MPI_File_close -#define MPI_File_delete HDF_MPI_File_delete -#define MPI_File_set_size HDF_MPI_File_set_size -#define MPI_File_preallocate HDF_MPI_File_preallocate -#define MPI_File_get_size HDF_MPI_File_get_size -#define MPI_File_get_group HDF_MPI_File_get_group -#define MPI_File_get_amode HDF_MPI_File_get_amode -#define MPI_File_set_view HDF_MPI_File_set_view -#define MPI_File_get_view HDF_MPI_File_get_view -#define MPI_File_read_at HDF_MPI_File_read_at -#define MPI_File_read_at_all HDF_MPI_File_read_at_all -#define MPI_File_write_at HDF_MPI_File_write_at -#define MPI_File_write_at_all HDF_MPI_File_write_at_all -#define MPI_File_iread_at HDF_MPI_File_iread_at -#define MPI_File_iwrite_at HDF_MPI_File_iwrite_at -#define MPI_File_read HDF_MPI_File_read -#define MPI_File_read_all HDF_MPI_File_read_all -#define MPI_File_write HDF_MPI_File_write -#define MPI_File_write_all HDF_MPI_File_write_all -#define MPI_File_iread HDF_MPI_File_iread -#define MPI_File_iwrite HDF_MPI_File_iwrite -#define MPI_File_seek HDF_MPI_File_seek -#define MPI_File_get_position HDF_MPI_File_get_position -#define MPI_File_get_byte_offset HDF_MPI_File_get_byte_offset -#define MPI_File_get_type_extent HDF_MPI_File_get_type_extent -#define MPI_File_set_atomicity HDF_MPI_File_set_atomicity -#define MPI_File_get_atomicity HDF_MPI_File_get_atomicity -#define MPI_File_sync HDF_MPI_File_sync -#endif -*/ -#endif -#endif -#ifdef __cplusplus -} - -#endif /* H5_HAVE_PARALLEL */ - -#endif /* HDFIOTRACE conditional */ diff --git a/pablo/HDFTrace.h b/pablo/HDFTrace.h deleted file mode 100644 index a8e2a47..0000000 --- a/pablo/HDFTrace.h +++ /dev/null @@ -1,173 +0,0 @@ -/* This file is part of the Pablo Performance Analysis Environment -// -// (R) -// The Pablo Performance Analysis Environment software is NOT in -// the public domain. However, it is freely available without fee for -// education, research, and non-profit purposes. By obtaining copies -// of this and other files that comprise the Pablo Performance Analysis -// Environment, you, the Licensee, agree to abide by the following -// conditions and understandings with respect to the copyrighted software: -// -// 1. The software is copyrighted in the name of the Board of Trustees -// of the University of Illinois (UI), and ownership of the software -// remains with the UI. -// -// 2. Permission to use, copy, and modify this software and its documentation -// for education, research, and non-profit purposes is hereby granted -// to Licensee, provided that the copyright notice, the original author's -// names and unit identification, and this permission notice appear on -// all such copies, and that no charge be made for such copies. Any -// entity desiring permission to incorporate this software into commercial -// products should contact: -// -// Professor Daniel A. Reed reed@cs.uiuc.edu -// University of Illinois -// Department of Computer Science -// 2413 Digital Computer Laboratory -// 1304 West Springfield Avenue -// Urbana, Illinois 61801 -// USA -// -// 3. Licensee may not use the name, logo, or any other symbol of the UI -// nor the names of any of its employees nor any adaptation thereof in -// advertizing or publicity pertaining to the software without specific -// prior written approval of the UI. -// -// 4. THE UI MAKES NO REPRESENTATIONS ABOUT THE SUITABILITY OF THE -// SOFTWARE FOR ANY PURPOSE. IT IS PROVIDED "AS IS" WITHOUT EXPRESS -// OR IMPLIED WARRANTY. -// -// 5. The UI shall not be liable for any damages suffered by Licensee from -// the use of this software. -// -// 6. The software was developed under agreements between the UI and the -// Federal Government which entitle the Government to certain rights. -// -// ************************************************************************* -// -// Developed by: The Pablo Research Group -// University of Illinois at Urbana-Champaign -// Department of Computer Science -// 1304 W. Springfield Avenue -// Urbana, IL 61801 -// -// http://www-pablo.cs.uiuc.edu -// -// Send comments to: pablo-feedback@guitar.cs.uiuc.edu -// -// Copyright (c) 1987-1998 -// The University of Illinois Board of Trustees. -// All Rights Reserved. -// -// PABLO is a registered trademark of -// The Board of Trustees of the University of Illinois -// registered in the U.S. Patent and Trademark Office. -// -// Project Manager and Principal Investigator: -// Daniel A. Reed (reed@cs.uiuc.edu) -// -// Funded in part by the Defense Advanced Research Projects Agency under -// DARPA contracts DABT63-94-C0049 (SIO Initiative), F30602-96-C-0161, -// and DABT63-96-C-0027 by the National Science Foundation under the PACI -// program and grants NSF CDA 94-01124 and ASC 97-20202, and by the -// Department of Energy under contracts DOE B-341494, W-7405-ENG-48, and -// 1-B-333164. -//======================================================================*/ -#ifndef HDFTRACE_H -#define HDFTRACE_H -/************************************************************************/ -/* A shared char * pointer (defined in HDF_Descriptors.c) and Macro */ -/* definitions */ -/************************************************************************/ -extern char *hdfRecordPointer; -/************************************************************************/ -/* The following are used in tagging HDF packets. Avoid using FAMILY */ -/* tags in the range 0100000 to 0200000 */ -/************************************************************************/ -#define HDF_FAMILY 0100000 -#define HDF_SUMMARY_FAMILY 0140000 -/************************************************************************/ -/* Number of fields in the packets. */ -/************************************************************************/ -#define NUM_FIELDS 17 -/* - * "WRITE_HDF_ATTR" macro to output an attribute pair. - */ -#ifndef WRITE_HDF_ATTR -#define WRITE_HDF_ATTR( attrKey, attrValue ) \ - sddfWriteString( &hdfRecordPointer, attrKey ); \ - sddfWriteString( &hdfRecordPointer, attrValue ); -#endif /* WRITE_HDF_ATTR */ - -/* - * "WRITE_HDF_FIELD" macro to output a field with a single attribute pair. - */ -#ifndef WRITE_HDF_FIELD -#define WRITE_HDF_FIELD( name, attrKey, attrValue, type, dimension ) \ - sddfWriteString( &hdfRecordPointer, name ); \ - sddfWriteInteger( &hdfRecordPointer, 1 ); \ - sddfWriteString( &hdfRecordPointer, attrKey ); \ - sddfWriteString( &hdfRecordPointer, attrValue ); \ - sddfWriteInteger( &hdfRecordPointer, type ); \ - sddfWriteInteger( &hdfRecordPointer, dimension ); -#endif /* WRITE_HDF_FIELD */ - -/* - * "WRITE_HDF_FIELD2" to output a field with two attribute pairs. - */ -#ifndef WRITE_HDF_FIELD2 -#define WRITE_HDF_FIELD2( name, aKey1, aValue1, aKey2, aValue2, type, dimension ) \ - sddfWriteString( &hdfRecordPointer, name ); \ - sddfWriteInteger( &hdfRecordPointer, 2 ); \ - sddfWriteString( &hdfRecordPointer, aKey1 ); \ - sddfWriteString( &hdfRecordPointer, aValue1 ); \ - sddfWriteString( &hdfRecordPointer, aKey2 ); \ - sddfWriteString( &hdfRecordPointer, aValue2 ); \ - sddfWriteInteger( &hdfRecordPointer, type ); \ - sddfWriteInteger( &hdfRecordPointer, dimension ); -#endif /* WRITE_HDF_FIELD2*/ - -#define FAMILY_NAME 0260 /* Data Set Name Record */ -#define FAMILY_MISC 0270 -#define FAMILY_HDFPROCNAME 0300 - -#define mpiOpenBeginID 900800 -#define mpiOpenEndID 900801 - -#define mpiCloseBeginID 900802 -#define mpiCloseEndID 900803 - -#define mpiSetSizeBeginID 900806 -#define mpiSetSizeEndID 900807 - -#define mpiGetSizeBeginID 900810 -#define mpiGetSizeEndID 900811 - -#define mpiSetViewBeginID 900816 -#define mpiSetViewEndID 900817 - -#define mpiGetViewBeginID 900818 -#define mpiGetViewEndID 900819 - -#define mpiReadAtBeginID 900820 -#define mpiReadAtEndID 900821 - -#define mpiReadAtAllBeginID 900822 -#define mpiReadAtAllEndID 900823 - -#define mpiWriteAtBeginID 900824 -#define mpiWriteAtEndID 900825 - -#define mpiWriteAtAllBeginID 900826 -#define mpiWriteAtAllEndID 900827 - -#define mpiSyncBeginID 900856 -#define mpiSyncEndID 900857 - -typedef struct { - long numBytes; - long setID; - char *setName; -} HDFsetInfo ; - -#endif /* HDFTRACE_H */ diff --git a/pablo/HDFmpioProtos.h b/pablo/HDFmpioProtos.h deleted file mode 100644 index 886983d..0000000 --- a/pablo/HDFmpioProtos.h +++ /dev/null @@ -1,77 +0,0 @@ -#ifdef PCF_BUILD -#define MPI_File_open PCF_MPI_File_open -#define MPI_File_close PCF_MPI_File_close -#define MPI_File_set_size PCF_MPI_File_set_size -#define MPI_File_get_size PCF_MPI_File_get_size -#define MPI_File_set_view PCF_MPI_File_set_view -#define MPI_File_get_view PCF_MPI_File_get_view -#define MPI_File_read_at PCF_MPI_File_read_at -#define MPI_File_read_at_all PCF_MPI_File_read_at_all -#define MPI_File_write_at PCF_MPI_File_write_at -#define MPI_File_write_at_all PCF_MPI_File_write_at_all -#define MPI_File_sync PCF_MPI_File_sync - -int PCF_MPI_File_open( MPI_Comm comm, char *filename, int amode, - MPI_Info info, MPI_File *fh ); -int PCF_MPI_File_close( MPI_File *fh ); -int PCF_MPI_File_delete( char *filename, MPI_Info info ); -int PCF_MPI_File_set_size( MPI_File fh, MPI_Offset size ); -int PCF_MPI_File_get_size( MPI_File fh, MPI_Offset *size ); -int PCF_MPI_File_set_view( MPI_File fh, MPI_Offset disp, MPI_Datatype etype, - MPI_Datatype filetype, char *datarep, - MPI_Info info ); -int PCF_MPI_File_get_view( MPI_File fh, MPI_Offset *disp, - MPI_Datatype *etype, MPI_Datatype *filetype, - char *datarep ); -int PCF_MPI_File_read_at( MPI_File fh, MPI_Offset offset, void *buf, - int count, MPI_Datatype datatype, - MPI_Status *status ); -int PCF_MPI_File_read_at_all( MPI_File fh, MPI_Offset offset, void *buf, - int count, MPI_Datatype datatype, - MPI_Status *status ); -int PCF_MPI_File_write_at( MPI_File fh, MPI_Offset offset, void *buf, - int count, MPI_Datatype datatype, - MPI_Status *status ); -int PCF_MPI_File_write_at_all( MPI_File fh, MPI_Offset offset, void *buf, - int count, MPI_Datatype datatype, - MPI_Status *status ); -int PCF_MPI_File_sync( MPI_File fh ); -#else -#define MPI_File_open HDF_MPI_File_open -#define MPI_File_close HDF_MPI_File_close -#define MPI_File_set_size HDF_MPI_File_set_size -#define MPI_File_get_size HDF_MPI_File_get_size -#define MPI_File_set_view HDF_MPI_File_set_view -#define MPI_File_get_view HDF_MPI_File_get_view -#define MPI_File_read_at HDF_MPI_File_read_at -#define MPI_File_read_at_all HDF_MPI_File_read_at_all -#define MPI_File_write_at HDF_MPI_File_write_at -#define MPI_File_write_at_all HDF_MPI_File_write_at_all -#define MPI_File_sync HDF_MPI_File_sync - -int HDF_MPI_File_open( MPI_Comm comm, char *filename, int amode, - MPI_Info info, MPI_File *fh ); -int HDF_MPI_File_close( MPI_File *fh ); -int HDF_MPI_File_delete( char *filename, MPI_Info info ); -int HDF_MPI_File_set_size( MPI_File fh, MPI_Offset size ); -int HDF_MPI_File_get_size( MPI_File fh, MPI_Offset *size ); -int HDF_MPI_File_set_view( MPI_File fh, MPI_Offset disp, MPI_Datatype etype, - MPI_Datatype filetype, char *datarep, - MPI_Info info ); -int HDF_MPI_File_get_view( MPI_File fh, MPI_Offset *disp, - MPI_Datatype *etype, MPI_Datatype *filetype, - char *datarep ); -int HDF_MPI_File_read_at( MPI_File fh, MPI_Offset offset, void *buf, - int count, MPI_Datatype datatype, - MPI_Status *status ); -int HDF_MPI_File_read_at_all( MPI_File fh, MPI_Offset offset, void *buf, - int count, MPI_Datatype datatype, - MPI_Status *status ); -int HDF_MPI_File_write_at( MPI_File fh, MPI_Offset offset, void *buf, - int count, MPI_Datatype datatype, - MPI_Status *status ); -int HDF_MPI_File_write_at_all( MPI_File fh, MPI_Offset offset, void *buf, - int count, MPI_Datatype datatype, - MPI_Status *status ); -int HDF_MPI_File_sync( MPI_File fh ); -#endif /* PCF_BUILD */ diff --git a/pablo/HDFrecord_RT.h b/pablo/HDFrecord_RT.h deleted file mode 100644 index 3fb3f31..0000000 --- a/pablo/HDFrecord_RT.h +++ /dev/null @@ -1,215 +0,0 @@ -/* - * This file is part of the Pablo Performance Analysis Environment - * - * (R) - * The Pablo Performance Analysis Environment software is NOT in - * the public domain. However, it is freely available without fee for - * education, research, and non-profit purposes. By obtaining copies - * of this and other files that comprise the Pablo Performance Analysis - * Environment, you, the Licensee, agree to abide by the following - * conditions and understandings with respect to the copyrighted software: - * - * 1. The software is copyrighted in the name of the Board of Trustees - * of the University of Illinois (UI), and ownership of the software - * remains with the UI. - * - * 2. Permission to use, copy, and modify this software and its documentation - * for education, research, and non-profit purposes is hereby granted - * to Licensee, provided that the copyright notice, the original author's - * names and unit identification, and this permission notice appear on - * all such copies, and that no charge be made for such copies. Any - * entity desiring permission to incorporate this software into commercial - * products should contact: - * - * Professor Daniel A. Reed reed@cs.uiuc.edu - * University of Illinois - * Department of Computer Science - * 2413 Digital Computer Laboratory - * 1304 West Springfield Avenue - * Urbana, Illinois 61801 - * USA - * - * 3. Licensee may not use the name, logo, or any other symbol of the UI - * nor the names of any of its employees nor any adaptation thereof in - * advertizing or publicity pertaining to the software without specific - * prior written approval of the UI. - * - * 4. THE UI MAKES NO REPRESENTATIONS ABOUT THE SUITABILITY OF THE - * SOFTWARE FOR ANY PURPOSE. IT IS PROVIDED "AS IS" WITHOUT EXPRESS - * OR IMPLIED WARRANTY. - * - * 5. The UI shall not be liable for any damages suffered by Licensee from - * the use of this software. - * - * 6. The software was developed under agreements between the UI and the - * Federal Government which entitle the Government to certain rights. - * - ************************************************************************** - * - * Developed by: The Pablo Research Group - * University of Illinois at Urbana-Champaign - * Department of Computer Science - * 1304 W. Springfield Avenue - * Urbana, IL 61801 - * - * http://www-pablo.cs.uiuc.edu - * - * Send comments to: pablo-feedback@guitar.cs.uiuc.edu - * - * Copyright (c) 1987-1996 - * The University of Illinois Board of Trustees. - * All Rights Reserved. - * - * PABLO is a registered trademark of - * The Board of Trustees of the University of Illinois - * registered in the U.S. Patent and Trademark Office. - * - * Author: Dan Wells (dwells@cs.uiuc.edu) - * - * Project Manager and Principal Investigator: - * Daniel A. Reed (reed@cs.uiuc.edu) - * - * Funded in part by National Science Foundation grants NSF CCR87-06653 - * and NSF CDA87-22836 (Tapestry), DARPA contracts DABT63-91-K-0004, - * DABT63-93-C-0040, DABT63-94-C-0049 (SIO), and F30602-96-C-0161, NASA - * contracts NAG-1-613 (ICLASS), USRA 5555-22, and NGT-51023, and a - * collaborative research agreement with the Intel Supercomputer - * Systems Division - */ -/* - * HDFrecord.h: Class to represent HDF records. - * - * $Header$ - */ - -#ifndef HDFRECORD_RT_H -#define HDFRECORD_RT_H -#ifndef NULL -#define NULL 0 -#endif - -#include <string.h> -#include <stdlib.h> -#include <limits.h> -#include "ProcIDs.h" - -#ifndef min -#define min( x , y ) ( x <= y ? x : y ) -#endif -#ifndef max -#define max( x , y ) ( x >= y ? x : y ) -#endif -/*======================================================================* -// Enumeration of time fields in an HDFrec_t below * -//======================================================================*/ -enum TimeFields { HDF_, - MPI, - Malloc, - AllIO, - Open, - Close, - Read, - Write, - Aread, - Awrite, - Seek, - Wait, - Misc, - MPIOread, - MPIOreadAll, - MPIOwrite, - MPIOwriteAll, - MPIOiRead, - MPIOiWrite, - MPIOother, - nTallyFields, - MPIOreadTrans, - MPIOreadAllTrans, - MPIOwriteTrans, - MPIOwriteAllTrans - }; -/*======================================================================* -// Enumeration of byte fields in an HDFrec_t below * -//======================================================================*/ -enum ByteFields{ MallocBytes, - ReadBytes, - WriteBytes, - AreadBytes, - AwriteBytes, - MPIOreadBytesReq, - MPIOreadBytesTrans, - MPIOwriteBytesReq, - MPIOwriteBytesTrans, - MPIOreadAllBytesReq, - MPIOreadAllBytesTrans, - MPIOwriteAllBytesReq, - MPIOwriteAllBytesTrans, - MPIOiReadBytesReq, - MPIOiWriteBytesReq, - nByteFields, - nHistFields = AwriteBytes+1 }; -/*======================================================================* -// Definition of first and last IO event. * -//======================================================================*/ -#define FirstIO Open -#define LastIO Misc -#define nBkts 4 -#define ONEK 1024 -int BktLim[] = { 1, 4*ONEK, 64*ONEK, 256*ONEK, INT_MAX } ; -/*======================================================================* -// Definition of structure used to account activity in an HDF call * -//======================================================================*/ -typedef struct { - int nCalls; /* number of proc calls */ - CLOCK lastCall; /* time of last call */ - CLOCK incDur; /* inclusive duration */ - CLOCK excDur; /* exclusive duration */ - CLOCK times[nTallyFields]; /* Tally op/calls times */ - int counts[nTallyFields]; /* Tally op/calls counts */ - int bytes[nByteFields]; /* Tally bytes transferred */ - int Hists[nHistFields][nBkts]; /* Historgrams */ - long hdfID; /* data set ID */ - long xRef; /* data set cross reference */ -} HDFrec_t; -/*======================================================================* -// Node used to maintain linked lists of HDF procedure activity. * -//======================================================================*/ -typedef struct HDFnode { - CLOCK lastIOtime; /* last IO time stamp */ - HDFrec_t record; /* data */ - struct HDFnode *ptr; /* link pointer */ - int eventID; /* event ID */ -} HDFnode_t; -/*======================================================================* -// Structure used to produce SDDF packets for Named identifiers. * -//======================================================================*/ -typedef struct { - int packetLength; /* bytes in packet */ - int packetType; /* == PKT_DATA */ - int packetTag; /* == FAMILY_<name> */ - int fileType; /* Type of data set */ - int fileID; /* File ID */ - int nameLen; /* length of file */ -} HDFNamePacket_t; -/*======================================================================* -// Node used to form linked lists to track named identifiers. * -//======================================================================*/ -typedef struct fileRec { - struct fileRec *ptr; - long hdfID; - long PabloID; - char *fileName; -} fileRec_t; -/*======================================================================= -// Utility programs to determine field index for a given eventID * -//=====================================================================*/ -int getHDFFieldIndex( int eventID ); -int getHDFByteFieldIndex( int eventID ); - -/* - * Define flags to distinguish misc i/o begin from misc i/o end - */ -#define MISC_BEGIN 0 -#define MISC_END 1 - -#endif /* HDFRECORD_RT_H */ diff --git a/pablo/Makefile.in b/pablo/Makefile.in deleted file mode 100644 index d0f82dc..0000000 --- a/pablo/Makefile.in +++ /dev/null @@ -1,314 +0,0 @@ -## HDF5 Library Makefile(.in) -## -## -## Copyright by the Board of Trustees of the University of Illinois. -## All rights reserved. -## -## This file is part of HDF5. The full HDF5 copyright notice, including -## terms governing use, modification, and redistribution, is contained in -## the files COPYING and Copyright.html. COPYING can be found at the root -## of the source code distribution tree; Copyright.html can be found at the -## root level of an installed copy of the electronic HDF5 document set and -## is linked from the top-level documents page. It can also be found at -## http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have -## access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. -## -top_srcdir=@top_srcdir@ -top_builddir=.. -srcdir=@srcdir@ - -@COMMENCE@ - -TRACE=$(PERL) $(top_srcdir)/bin/trace -.SUFFIXES: .c .o .lo .x - -############################################################################### -## MODIFICATONS FOR CREATING THE PABLO INSTRUMENTED LIBRARY libhdf5-inst.a -## For Pablo instrumenation of parallel code, remove the # from in front of -## PABLO_MPIO_FLAGS. -############################################################################### -PARALLEL_PABLO=@PARALLEL_PABLO@ - -PABLO_MPIO_FLAGS=${PARALLEL_PABLO:yes=-DH5_HAVE_PARALLEL -DH5_HAVE_MPIOTRACE} -PABLO_INC=-I$(top_srcdir)/src -I$(top_srcdir)/pablo -I$(top_builddir)/src -I. -PABLO_DEFS=-DH5_HAVE_PABLO -DH5_DEBUG_API -DNDEBUG -D$(PABLO_BLD)_BUILD - -PABLO_FLAGS=$(PABLO_DEFS) $(PABLO_MPIO_FLAGS) $(PABLO_INC) - -CPPFLAGS=$(PABLO_FLAGS) @CPPFLAGS@ - -## This is our main target: -LIB=libhdf5-inst.a - -SRCDIRS=./. ../src/. - -# Took out the GNU'isms for the SRCFILES and LIB_SRC variables. -# -# This may cause problems in two ways: any changes to the SRCDIRS -# variable should be make to the SRCFILES macro also and the LIB_SRC -# variable now has directory paths included in it (which may cause -# problems somewhere). - QAK -# -LIB_SRC=H5.c H5A.c H5AC.c H5B.c H5D.c H5Dio.c H5E.c H5F.c H5FD.c \ - H5FDcore.c H5FDfamily.c H5FDgass.c H5FDlog.c \ - H5FDmpio.c H5FDmpiposix.c H5FDmulti.c H5FDsec2.c H5FDsrb.c \ - H5FDstdio.c H5FDstream.c H5FL.c H5FO.c \ - H5FS.c H5Fcompact.c H5Fcontig.c H5Fistore.c H5Fseq.c \ - H5G.c H5Gent.c H5Gnode.c H5Gstab.c H5HG.c H5HL.c H5HP.c H5I.c \ - H5MF.c H5MM.c H5O.c H5Oattr.c H5Obogus.c H5Ocont.c H5Odtype.c \ - H5Oefl.c H5Ofill.c H5Olayout.c H5Omtime.c H5Oname.c H5Onull.c \ - H5Opline.c H5Osdspace.c H5Oshared.c H5Ostab.c H5P.c H5Pdcpl.c \ - H5Pdxpl.c H5Pfapl.c H5Pfcpl.c H5Ptest.c H5R.c H5RS.c H5S.c H5ST.c \ - H5Sall.c H5Shyper.c H5Smpio.c H5Snone.c H5Spoint.c H5Sselect.c \ - H5Stest.c H5T.c H5TB.c H5TS.c H5Tarray.c H5Tbit.c H5Tcommit.c \ - H5Tcompound.c H5Tconv.c H5Tcset.c H5Tenum.c H5Tfields.c H5Tfixed.c \ - H5Tfloat.c H5Tinit.c H5Tnative.c H5Toffset.c H5Topaque.c H5Torder.c \ - H5Tpad.c H5Tprecis.c H5Tstrpad.c H5Tvlen.c H5V.c H5Z.c H5Zdeflate.c \ - H5Zfletcher32.c H5Zshuffle.c H5Zszip.c H5detect.c - -PABLO_OBJ=PabloHDF.o PabloHDF_RT.o PabloHDF_SDDF.o PabloHDF_MPIO.o - -LIB_XOBJ=$(LIB_SRC:.c=.x) -LIB_COBJ=$(LIB_XOBJ:.x=.o) -LIB_OBJ=$(PABLO_OBJ) $(LIB_COBJ) - -.c.x: - if test "$*" != "H5Tinit"; then \ - $(CC) $(CFLAGS) $(CPPFLAGS) -c $(top_srcdir)/src/$*.c -o $*.o; \ - else \ - $(CC) $(CFLAGS) $(CPPFLAGS) -c $(top_builddir)/src/$*.c -o $*.o; \ - fi; - cp $*.o $@ - -# 'vpath' directive is only supported in gmake, take out - QAK -#vpath %.c $(shell echo $(SRCDIRS) | sed 's/ /:/g') - -## Pablo header files (to be installed)... -PABLO_HDR=HDFentryNames.h HDFidList.h ProcIDs.h HDFTrace.h ProcTrace.h \ - ProcTrace.inc - -##------------------------------------------------------------ -*- makefile -*- -## The following section of this makefile comes from the -## `./config/conclude' file which was generated with config.status -## from `./config/conclude.in'. -##----------------------------------------------------------------------------- - -## This is the target for the library described in the main body of the -## makefile. -## -lib: $(LIB) -$(LIB): $(PABLO_OBJ) $(LIB_XOBJ) - $(AR) -rc $@ $(LIB_OBJ) - $(RANLIB) $@ -## -## Dummy this out so that there is no redundant make of the library -## -progs: - -## Build a tags file in this directory. -TAGS: $(LIB_SRC) - $(RM) $@ - -etags $(LIB_SRC) - -## -## Dummy this out so that there is no redundant make of the library -## -tests: - -## Install the library, the public header files, and programs. -install: $(LIB) - @test -d $(libdir) || mkdir $(libdir) - @for f in X $(LIB); do \ - if test $$f != X; then \ - (set -x; $(INSTALL_DATA) $$f $(libdir)/. || exit 1); \ - fi; \ - done - @test -d $(includedir) || mkdir $(includedir) - @for f in X $(PABLO_HDR); do \ - if test $$f != X; then \ - (set -x; $(INSTALL_DATA) $$f $(includedir)/. || exit 1); \ - fi \ - done - -## Removes those things that `make install' (would have) installed. -uninstall: - @if test "X$(LIB)" != X; then \ - set -x; cd $(libdir) && $(RM) $(LIB); \ - fi - -## Removes temporary files without removing the final target files. That is, -## remove things like object files but not libraries or executables. -## -mostlyclean: - $(RM) $(LIB_OBJ) $(LIB_XOBJ) $(TEST_OBJ) $(PROG_OBJ) $(MOSTLYCLEAN) - -## Like `mostlyclean' except it also removes the final targets: things like -## libraries and executables. This target doesn't remove any file that -## is part of the HDF5 distribution. -## -clean: mostlyclean - $(RM) $(LIB) $(TESTS) $(PROGS) $(CLEAN) $(PABLO_CLEAN) H*.c - -## Like `clean' except it also removes files that were created by running -## configure. If you've unpacked the source and built HDF5 without creating -## any other files, then `make distclean' will leave only the files that were -## in the distribution. -## -distclean: clean - $(RM) .depend TAGS *~ core *.core *.bak *.old *.new $(DISTCLEAN) - @if test -f $(top_srcdir)/src/Makefile.in; then \ - (set -x; $(RM) Makefile); \ - fi - -## Like `distclean' except it deletes all files that can be regenerated from -## the makefile, including those generated from autoheader and autoconf. -## -maintainer-clean: distclean - $(RM) *~ core core.* *.core *.bak *.contrib gmon.out - -.c.lo: - @$(LT_COMPILE) $(CFLAGS) $(CPPFLAGS) -c $(top_srcdir)/src/$*.c $< - -.PHONY: all progs test _test check dep depend - -PABLO_INCLUDES=HDFentryNames.h HDFidList.h ProcIDs.h HDFTrace.h ProcTrace.h \ - ProcTrace.inc - -PABLO_CLEAN=HDFentryNames.h HDFidList.h ProcMasks.h HDFentries.txt \ - ProcTrace.inc - -HDFentries.txt: $(top_srcdir)/src/*.c - grep "FUNC_ENTER[_INITNOAPICLEARFS ]*(" $(top_srcdir)/src/*.[ch] | \ - sed "s/.*FUNC_ENTER[_INITNOAPICLEARFS ]*( *//;s/[,)].*//" | sort -u > $@ - -HDFentryNames.h: HDFentries.txt - sed "s/.*/\"&\",/" $? > $@ - -HDFidList.h: HDFentries.txt - sed "s/.*/ID_&,/" $? > $@ - echo ID_ALLHDF, >> $@ - grep "#define[ ]*PABLO_MASK" $(top_srcdir)/src/*.c | \ - sed "s/.*H5/ID_H5/;s/mask.*/c,/" | sort -u >> $@ - -ProcMasks.h: $(top_srcdir)/src/*.c - grep "#define[ ]*PABLO_MASK" $(top_srcdir)/src/*.c | \ - sed "s/.*[ ]H5/H5/;s/_mask.*//;s/.*/#define &_mask ID_&_c/" >$@ - -ProcIDs.h: HDFidList.h ProcMasks.h - -ProcTrace.inc: HDFidList.h - sed "=" $? | sed -f $(top_srcdir)/pablo/PabloSedscr > $@ - -PabloHDF.o: PabloHDF.c $(PABLO_INCLUDES) - $(CC) -g $(CFLAGS) $(CPPFLAGS) $(PABLO_FLAGS) -c $< - -PabloHDF_RT.o: PabloHDF_RT.c $(PABLO_INCLUDES) - $(CC) $(CFLAGS) $(CPPFLAGS) $(PABLO_FLAGS) -c $< - -PabloHDF_SDDF.o: PabloHDF_SDDF.c $(PABLO_INCLUDES) - $(CC) $(CFLAGS) $(CPPFLAGS) $(PABLO_FLAGS) -c $< - -PabloHDF_MPIO.o: PabloHDF_MPIO.c $(PABLO_INCLUDES) - $(CC) $(CFLAGS) $(CPPFLAGS) $(PABLO_FLAGS) -c $< - -PabloHDFff.o: PabloHDFff.f $(PABLO_INCLUDES) - $(F77) $(FFLAGS) -O -c PabloHDFff.f - -H5.c: $(top_srcdir)/src/H5.c -H5A.c: $(top_srcdir)/src/H5A.c -H5AC.c: $(top_srcdir)/src/H5AC.c -H5B.c: $(top_srcdir)/src/H5B.c -H5D.c: $(top_srcdir)/src/H5D.c -H5Dio.c: $(top_srcdir)/src/H5Dio.c -H5E.c: $(top_srcdir)/src/H5E.c -H5F.c: $(top_srcdir)/src/H5F.c -H5FD.c: $(top_srcdir)/src/H5FD.c -H5FDcore.c: $(top_srcdir)/src/H5FDcore.c -H5FDfamily.c: $(top_srcdir)/src/H5FDfamily.c -H5FDgass.c: $(top_srcdir)/src/H5FDgass.c -H5FDlog.c: $(top_srcdir)/src/H5FDlog.c -H5FDmpio.c: $(top_srcdir)/src/H5FDmpio.c -H5FDmpiposix.c: $(top_srcdir)/src/H5FDmpiposix.c -H5FDmulti.c: $(top_srcdir)/src/H5FDmulti.c -H5FDsec2.c: $(top_srcdir)/src/H5FDsec2.c -H5FDsrb.c: $(top_srcdir)/src/H5FDsrb.c -H5FDstdio.c: $(top_srcdir)/src/H5FDstdio.c -H5FDstream.c: $(top_srcdir)/src/H5FDstream.c -H5FL.c: $(top_srcdir)/src/H5FL.c -H5FO.c: $(top_srcdir)/src/H5FO.c -H5FS.c: $(top_srcdir)/src/H5FS.c -H5Fcompact.c: $(top_srcdir)/src/H5Fcompact.c -H5Fcontig.c: $(top_srcdir)/src/H5Fcontig.c -H5Fistore.c: $(top_srcdir)/src/H5Fistore.c -H5Fseq.c: $(top_srcdir)/src/H5Fseq.c -H5G.c: $(top_srcdir)/src/H5G.c -H5Gent.c: $(top_srcdir)/src/H5Gent.c -H5Gnode.c: $(top_srcdir)/src/H5Gnode.c -H5Gstab.c: $(top_srcdir)/src/H5Gstab.c -H5HG.c: $(top_srcdir)/src/H5HG.c -H5HL.c: $(top_srcdir)/src/H5HL.c -H5HP.c: $(top_srcdir)/src/H5HP.c -H5I.c: $(top_srcdir)/src/H5I.c -H5MF.c: $(top_srcdir)/src/H5MF.c -H5MM.c: $(top_srcdir)/src/H5MM.c -H5O.c: $(top_srcdir)/src/H5O.c -H5Oattr.c: $(top_srcdir)/src/H5Oattr.c -H5Obogus.c: $(top_srcdir)/src/H5Obogus.c -H5Ocont.c: $(top_srcdir)/src/H5Ocont.c -H5Odtype.c: $(top_srcdir)/src/H5Odtype.c -H5Oefl.c: $(top_srcdir)/src/H5Oefl.c -H5Ofill.c: $(top_srcdir)/src/H5Ofill.c -H5Olayout.c: $(top_srcdir)/src/H5Olayout.c -H5Omtime.c: $(top_srcdir)/src/H5Omtime.c -H5Oname.c: $(top_srcdir)/src/H5Oname.c -H5Onull.c: $(top_srcdir)/src/H5Onull.c -H5Opline.c: $(top_srcdir)/src/H5Opline.c -H5Osdspace.c: $(top_srcdir)/src/H5Osdspace.c -H5Oshared.c: $(top_srcdir)/src/H5Oshared.c -H5Ostab.c: $(top_srcdir)/src/H5Ostab.c -H5P.c: $(top_srcdir)/src/H5P.c -H5Pdcpl.c: $(top_srcdir)/src/H5Pdcpl.c -H5Pdxpl.c: $(top_srcdir)/src/H5Pdxpl.c -H5Pfapl.c: $(top_srcdir)/src/H5Pfapl.c -H5Pfcpl.c: $(top_srcdir)/src/H5Pfcpl.c -H5Ptest.c: $(top_srcdir)/src/H5Ptest.c -H5R.c: $(top_srcdir)/src/H5R.c -H5RS.c: $(top_srcdir)/src/H5RS.c -H5S.c: $(top_srcdir)/src/H5S.c -H5ST.c: $(top_srcdir)/src/H5ST.c -H5Sall.c: $(top_srcdir)/src/H5Sall.c -H5Shyper.c: $(top_srcdir)/src/H5Shyper.c -H5Smpio.c: $(top_srcdir)/src/H5Smpio.c -H5Snone.c: $(top_srcdir)/src/H5Snone.c -H5Spoint.c: $(top_srcdir)/src/H5Spoint.c -H5Sselect.c: $(top_srcdir)/src/H5Sselect.c -H5Stest.c: $(top_srcdir)/src/H5Stest.c -H5T.c: $(top_srcdir)/src/H5T.c -H5TB.c: $(top_srcdir)/src/H5TB.c -H5TS.c: $(top_srcdir)/src/H5TS.c -H5Tarray.c: $(top_srcdir)/src/H5Tarray.c -H5Tbit.c: $(top_srcdir)/src/H5Tbit.c -H5Tcommit.c: $(top_srcdir)/src/H5Tcommit.c -H5Tcompound.c: $(top_srcdir)/src/H5Tcompound.c -H5Tconv.c: $(top_srcdir)/src/H5Tconv.c -H5Tcset.c: $(top_srcdir)/src/H5Tcset.c -H5Tenum.c: $(top_srcdir)/src/H5Tenum.c -H5Tfields.c: $(top_srcdir)/src/H5Tfields.c -H5Tfixed.c: $(top_srcdir)/src/H5Tfixed.c -H5Tfloat.c: $(top_srcdir)/src/H5Tfloat.c -H5Tinit.c: $(top_srcdir)/src/H5Tinit.c -H5Tnative.c: $(top_srcdir)/src/H5Tnative.c -H5Toffset.c: $(top_srcdir)/src/H5Toffset.c -H5Topaque.c: $(top_srcdir)/src/H5Topaque.c -H5Torder.c: $(top_srcdir)/src/H5Torder.c -H5Tpad.c: $(top_srcdir)/src/H5Tpad.c -H5Tprecis.c: $(top_srcdir)/src/H5Tprecis.c -H5Tstrpad.c: $(top_srcdir)/src/H5Tstrpad.c -H5Tvlen.c: $(top_srcdir)/src/H5Tvlen.c -H5V.c: $(top_srcdir)/src/H5V.c -H5Z.c: $(top_srcdir)/src/H5Z.c -H5Zdeflate.c: $(top_srcdir)/src/H5Zdeflate.c -H5Zfletcher32.c: $(top_srcdir)/src/H5Zfletcher32.c -H5Zshuffle.c: $(top_srcdir)/src/H5Zshuffle.c -H5Zszip.c: $(top_srcdir)/src/H5Zszip.c -H5detect.c: $(top_srcdir)/src/H5detect.c diff --git a/pablo/PabloHDF.c b/pablo/PabloHDF.c deleted file mode 100644 index f756381..0000000 --- a/pablo/PabloHDF.c +++ /dev/null @@ -1,1416 +0,0 @@ -/* This file is part of the Pablo Performance Analysis Environment -// -// (R) -// The Pablo Performance Analysis Environment software is NOT in -// the public domain. However, it is freely available without fee for -// education, research, and non-profit purposes. By obtaining copies -// of this and other files that comprise the Pablo Performance Analysis -// Environment, you, the Licensee, agree to abide by the following -// conditions and understandings with respect to the copyrighted software: -// -// 1. The software is copyrighted in the name of the Board of Trustees -// of the University of Illinois (UI), and ownership of the software -// remains with the UI. -// -// 2. Permission to use, copy, and modify this software and its documentation -// for education, research, and non-profit purposes is hereby granted -// to Licensee, provided that the copyright notice, the original author's -// names and unit identification, and this permission notice appear on -// all such copies, and that no charge be made for such copies. Any -// entity desiring permission to incorporate this software into commercial -// products should contact: -// -// Professor Daniel A. Reed reed@cs.uiuc.edu -// University of Illinois -// Department of Computer Science -// 2413 Digital Computer Laboratory -// 1304 West Springfield Avenue -// Urbana, Illinois 61801 -// USA -// -// 3. Licensee may not use the name, logo, or any other symbol of the UI -// nor the names of any of its employees nor any adaptation thereof in -// advertizing or publicity pertaining to the software without specific -// prior written approval of the UI. -// -// 4. THE UI MAKES NO REPRESENTATIONS ABOUT THE SUITABILITY OF THE -// SOFTWARE FOR ANY PURPOSE. IT IS PROVIDED "AS IS" WITHOUT EXPRESS -// OR IMPLIED WARRANTY. -// -// 5. The UI shall not be liable for any damages suffered by Licensee from -// the use of this software. -// -// 6. The software was developed under agreements between the UI and the -// Federal Government which entitle the Government to certain rights. -// -// ************************************************************************* -// -// Developed by: The Pablo Research Group -// University of Illinois at Urbana-Champaign -// Department of Computer Science -// 1304 W. Springfield Avenue -// Urbana, IL 61801 -// -// http://www-pablo.cs.uiuc.edu -// -// Send comments to: pablo-feedback@guitar.cs.uiuc.edu -// -// Copyright (c) 1987-1998 -// The University of Illinois Board of Trustees. -// All Rights Reserved. -// -// PABLO is a registered trademark of -// The Board of Trustees of the University of Illinois -// registered in the U.S. Patent and Trademark Office. -// -// Project Manager and Principal Investigator: -// Daniel A. Reed (reed@cs.uiuc.edu) -// -// Funded in part by the Defense Advanced Research Projects Agency under -// DARPA contracts DABT63-94-C0049 (SIO Initiative), F30602-96-C-0161, -// and DABT63-96-C-0027 by the National Science Foundation under the PACI -// program and grants NSF CDA 94-01124 and ASC 97-20202, and by the -// Department of Energy under contracts DOE B-341494, W-7405-ENG-48, and -// 1-B-333164. -//========================================================================*/ - -#include <stdio.h> -#include <stdlib.h> -#include <fcntl.h> -#include <stdarg.h> -#include <limits.h> -#ifndef fileno -int fileno ( FILE * ); -#endif -/* on ipsc/860 don't include this or you'll get multiply defined SEEK_* */ -#ifndef __NX -#include <unistd.h> -#endif - - -#define HDFtrace3OPEN__ -int HDFtrace3OPEN( const char *, int, mode_t ); - -#ifdef TRACELIB_BUILD -#undef PCF_BUILD -#endif - -#ifndef PCF_BUILD -#include "SDDFparam.h" -#include "TraceParam.h" - -#include "SystemDepend.h" -#include "Trace.h" - -#include "IO_TraceParams.h" -#include "IOTrace.h" -#endif - -#include "HDFIOTrace.h" - -#ifndef TRUE -#define TRUE 1 -#endif - -#ifndef FALSE -#define FALSE 0 -#endif - -/* mode_t is not defined on the ipsc/860 so we define it here */ -#ifdef __NX -typedef unsigned int mode_t; -#endif - -#ifdef H5_HAVE_PARALLEL -#define HAVE_MPIO -#endif - -int OUTPUT_SWITCH = 1; -int *procTrace; -extern void preInitIOTrace( void ); - -#include "ProcIDs.h" -#include "HDFTrace.h" - -#define ID_HDFprocName 9996 -#define ID_malloc 9997 -#define ID_free 9998 -#define ID_timeStamp 9999 -#define DUMMY_HDF 10000 - -char HDFprocNames[][80] = { -"noName", -"noName", -"noName", -"noName", -"noName", -#include "HDFentryNames.h" -"HDF_LAST_ENTRY" -}; - -void startHDFtraceEvent (int ); -void endHDFtraceEvent (int , int , char *, int ); -void getHDFprocName( int, char[81] ); - -void setHDFcallLevel( int ); -void resetHDFcallLevel( void ); -int HDFcallLevel; -int MaxHDFcallLevel = INT_MAX; - -#ifdef PCF_BUILD -#include "PcUIOinterface.h" -void hdfCaptureInit( const char* name, int procNum, int captureType ); -void hdfCaptureEnd( void ); -void traceHDFentryEvent( int eventID ) ; -void traceHDFexitEvent( int eventID ); -void basePerformanceInit( const char* name, int procNum ); -void genericBaseInit( int captureType, int procNum ); -void unixIObaseInit( int captureType, int procNum ); -int hdfBaseInit( int captureType, - int procNum, - int numHDFentries, - char HDFprocNames[][80] ); -void timeStamp( void ); -void hdfBaseEnd( void ); -void unixIObaseEnd( void ); -void genericBaseEnd( void ); -void basePerformanceEnd( void ); -/*void* traceMALLOC( size_t bytes ); -FILE* traceFOPEN( const char* fileName, const char* type ); -int traceOPEN( const char *path, int flags, ... ) ; -int trace3OPEN( const char *path, int flags, mode_t mode ) ; -int traceCREAT( const char *path, mode_t mode ) ; -int traceFFLUSH( FILE *stream ) ; -int traceFCLOSE( FILE *stream ) ; -int traceCLOSE( int fd ) ; -ssize_t traceREAD( int fd, void *buf, int nbyte ) ; -size_t traceFREAD( void *ptr, int size, int nItems, FILE *stream ) ; -int traceFGETC( FILE *stream ) ; -char* traceFGETS( char *s, int n, FILE *stream ) ; -int traceGETW( FILE *stream ) ; -off_t traceLSEEK( int fd, off_t offset, int whence ) ; -int traceFSEEK( FILE *stream, off_t offset, int whence ) ; -int traceFSETPOS( FILE *stream, const fpos_t *position ) ; -void traceREWIND( FILE *stream ) ; -ssize_t traceWRITE( int fd, const void *buf, int nbyte ) ; -size_t traceFWRITE(const void *ptr, int size, int nItems, FILE *stream ) ; -int traceFPUTC( int c, FILE *stream ) ; -int traceFPUTS( const char *s, FILE *stream ) ; -int tracePUTS( const char *s ) ; -int tracePUTW( int w, FILE *stream ) ;*/ -#else -void HDFinitTrace_RT ( const char *, int procNum ); -void HDFinitTrace_SDDF ( const char *, int procNum ); -void hinittracex_ ( char [], int *, int*, int[], int *,unsigned * ); -void hdfendtrace_ ( void ) ; -void HDFendTrace_RT (void ); -void HDFendTrace_SDDF( void ); -void HDFfinalTimeStamp( void ); -void HDFtraceEvent_RT ( int , HDFsetInfo *, unsigned ); -void HDFtraceIOEvent( int , void *, unsigned ); -extern int IOtracingEnabled; -extern int suppressMPIOtrace; -char *hdfRecordPointer; -#endif - -/*======================================================================* -// NAME * -// HDFinitTrace -- initialize HDF tracing * -// USAGE * -// VOID HDFinitTrace( traceFileName, out_sw ) * -// char *traceFileName; IN: name of the generated trace output * -// file * -// int ... IN: indicates which routines to trace * -// The list is terminated by the * -// OUTPUT_SWITCH value indicating * -// whether to do RunTime or Summary * -// tracing. * -// RETURNS * -// None. * -//======================================================================*/ -/*======================================================================* -// fortran to C interface. * -// This is called from hdfinittracef_ * -//======================================================================*/ -void -hinittracex_( char *file, - int *len, - int *procNum, - int flags[], - int *nflags, - unsigned *out_sw ) -{ - char *traceFileName; - int i; - traceFileName = (char *)malloc(*len+1); - HDFcallLevel = 0; - for ( i = 0; i < *len; ++i ) - { - traceFileName[i] = file[i]; - } - traceFileName[*len] = 0; - /*===================================================================* - // Allocate space for trace indicators. * - //===================================================================*/ - procTrace = ( int * ) malloc( NUM_HDF_IDS*sizeof(int) ); - if ( procTrace == NULL ) - { - fprintf(stderr,">> Error: Unable to allocate procTrace "); - fprintf(stderr,"array in program HDFinitTrace. <<<\n"); - fprintf(stderr,">>> Exiting program! <<<\n"); - exit (-1); - } - /*===================================================================* - // Initialize to 0. * - //===================================================================*/ - for ( i = 0; i < NUM_HDF_IDS; ++i ) - { - procTrace[i] = 0; - } - /*===================================================================* - // Read in the flags indicating which procedures to trace. * - // The last parameter passed is an indicator of the type of * - // tracing to do. This indicator has a value larger than any * - // of the flags. * - //===================================================================*/ - for ( i = 0; i < *nflags; ++i ) - { - procTrace[flags[i]] = 1; - } - OUTPUT_SWITCH = *out_sw; - /*===================================================================* - // if no flags were passed, the default is to trace all of the * - // procedures. * - //===================================================================*/ - if ( *nflags == 0 || procTrace[ID_ALLHDF] ) - { - for ( i = 0; i < NUM_HDF_IDS; ++i ) - { - procTrace[i] = 1; - } - } -#ifdef PCF_BUILD - hdfCaptureInit( traceFileName, *procNum, OUTPUT_SWITCH ); -#else - suppressMPIOtrace = TRUE; - if ( OUTPUT_SWITCH == RUNTIME_TRACE - || OUTPUT_SWITCH == MPI_RUNTIME_TRACE ) - { - HDFinitTrace_SDDF( traceFileName, *procNum ); - IOtracingEnabled = 1; - } - else if ( OUTPUT_SWITCH == SUMMARY_TRACE - || OUTPUT_SWITCH == MPI_SUMMARY_TRACE ) - { - HDFinitTrace_RT( traceFileName, *procNum ); - IOtracingEnabled = 1; - } - else if ( OUTPUT_SWITCH == NO_TRACE ) - { - IOtracingEnabled = 0; - } - else - { - fprintf(stderr,">> Error in HDFinitTrace: the third argument "); - fprintf(stderr,"must have a value between %4d<<\n",RUNTIME_TRACE); - fprintf(stderr,">> and %4d, inclusive.",NO_TRACE); - fprintf(stderr," The value received was %4u.", OUTPUT_SWITCH); - fprintf(stderr," Exiting Program. <<\n"); - exit (-1); - } -#endif /* PCF_BUILD */ -} -void -HDFinitTrace( const char *traceFileName, int procNum, int id_flag, ... ) -{ - int i; - int nIDs; - va_list ap; - HDFcallLevel = 0; - /*===================================================================* - // Allocate space for trace indicators. * - //===================================================================*/ - procTrace = ( int * ) malloc( NUM_HDF_IDS*sizeof(int) ); - if ( procTrace == NULL ) - { - fprintf(stderr,">> Error: Unable to allocate procTrace "); - fprintf(stderr,"array in program HDFinitTrace. <<<\n"); - fprintf(stderr,">>> Exiting program! <<<\n"); - exit (-1); - } - /*===================================================================* - // Initialize to 0. * - //===================================================================*/ - for ( i = 0; i < NUM_HDF_IDS; ++i ) - { - procTrace[i] = 0; - } - /*===================================================================* - // Read in the flags indicating which procedures to trace. * - // The last parameter passed is an indicator of the type of * - // tracing to do. This indicator has a value larger than any * - // of the flags. * - //===================================================================*/ - nIDs = 0; - va_start( ap, id_flag ); - while ( id_flag > LAST_TRACE_TYPE ) - { - procTrace[id_flag] = 1; - ++nIDs; - id_flag = va_arg ( ap, int ); - } - OUTPUT_SWITCH = id_flag; - /*===================================================================* - // if no flags were passed, the default is to trace all of the * - // procedures. * - //===================================================================*/ - if ( nIDs == 0 || procTrace[ID_ALLHDF] ) - { - for ( i = 0; i < NUM_HDF_IDS; ++i ) - { - procTrace[i] = 1; - } - } -#ifdef PCF_BUILD - hdfCaptureInit( traceFileName, procNum, OUTPUT_SWITCH ); -#else - suppressMPIOtrace = TRUE; - if ( OUTPUT_SWITCH == RUNTIME_TRACE - || OUTPUT_SWITCH == MPI_RUNTIME_TRACE ) - { - HDFinitTrace_SDDF( traceFileName, procNum ); - IOtracingEnabled = 1; - } - else if ( OUTPUT_SWITCH == SUMMARY_TRACE - || OUTPUT_SWITCH == MPI_SUMMARY_TRACE ) - { - HDFinitTrace_RT( traceFileName, procNum ); - IOtracingEnabled = 1; - } - else if ( OUTPUT_SWITCH == NO_TRACE ) - { - IOtracingEnabled = 0; - } - else - { - fprintf(stderr,">> Error in HDFinitTrace: the third argument "); - fprintf(stderr,"must have a value between %4d<<\n",RUNTIME_TRACE); - fprintf(stderr,">> and %4d, inclusive.",NO_TRACE); - fprintf(stderr," The value received was %4u.", OUTPUT_SWITCH); - fprintf(stderr," Exiting Program. <<\n"); - exit (-1); - } -#endif /* PCF_BUILD */ -} -/*======================================================================* -// NAME * -// HDFendTrace -- end HDF tracing * -// USAGE * -// VOID HDFendTrace(VOID) * -// RETURNS * -// None. * -//======================================================================*/ -void hdfendtrace_( void ) -{ - HDFendTrace (); -} -void setHDFcallLevel( int maxLevel ) -{ - MaxHDFcallLevel = maxLevel; -} -void resetHDFcallLevel() -{ - MaxHDFcallLevel = INT_MAX; -} -void HDFendTrace(void) -{ -#ifdef PCF_BUILD - hdfCaptureEnd(); -#else - if ( OUTPUT_SWITCH == RUNTIME_TRACE - || OUTPUT_SWITCH == MPI_RUNTIME_TRACE ) - { - HDFendTrace_SDDF( ); - } - else if ( OUTPUT_SWITCH == SUMMARY_TRACE - || OUTPUT_SWITCH == MPI_SUMMARY_TRACE ) - { - HDFendTrace_RT(); - } -#endif /* PCF_BUILD */ - OUTPUT_SWITCH = NO_TRACE; - MaxHDFcallLevel = INT_MAX; -} -void startHDFtraceEvent(int eventID) -{ - ++HDFcallLevel; - if ( HDFcallLevel <= MaxHDFcallLevel ) - { -#ifdef PCF_BUILD - if (OUTPUT_SWITCH != NO_TRACE ) - { - traceHDFentryEvent( eventID ) ; - } -#else - if ( OUTPUT_SWITCH == RUNTIME_TRACE - || OUTPUT_SWITCH == MPI_RUNTIME_TRACE ) - { - traceEvent( eventID, NULL, 0 ) ; - } - else if (OUTPUT_SWITCH != NO_TRACE ) - { - HDFtraceEvent_RT( eventID, NULL, 0 ) ; - } -#endif /* PCF_BUILD */ - } -} -void endHDFtraceEvent(int eventID, int setID, char *setName, int IDtype ) -{ - if ( HDFcallLevel <= MaxHDFcallLevel ) - { -#ifdef PCF_BUILD - { - traceHDFexitEvent( eventID ); - } -#else - HDFsetInfo info; - info.setID = setID; - info.setName = setName; - if ( OUTPUT_SWITCH == RUNTIME_TRACE - || OUTPUT_SWITCH == MPI_RUNTIME_TRACE ) - { - traceEvent( eventID, (char *)&info, 0 ) ; - } - else if ( OUTPUT_SWITCH == SUMMARY_TRACE - || OUTPUT_SWITCH == MPI_SUMMARY_TRACE ) - { - HDFtraceEvent_RT( eventID, &info, 0 ) ; - } - else if ( OUTPUT_SWITCH != NO_TRACE ) - { - fprintf(stderr,"endHDFtraceEvent: "); - fprintf(stderr,"invalid OUTPUT_SWITCH %d, IDtype = %d\n", - OUTPUT_SWITCH, IDtype ) ; - } -#endif /* PCF_BUILD */ - } - --HDFcallLevel; -} -#ifdef PCF_BUILD -void -hdfCaptureInit( const char* name, int procNum, int captureType ) -{ - basePerformanceInit( name, procNum ); - genericBaseInit( captureType, procNum ); - unixIObaseInit( captureType, procNum ); -#ifdef HAVE_MPIO - mpiIObaseInit( captureType, procNum ); -#endif - hdfBaseInit( captureType, - procNum, - ID_HDF_Last_Entry, - HDFprocNames ); - HDFcallLevel = 0; -} -void -hdfCaptureEnd( void ) -{ - int i; - timeStamp(); - for ( i = 0; i < NUM_HDF_IDS; ++i ) - { - procTrace[i] = 0; - } - hdfBaseEnd(); -#ifdef HAVE_MPIO - mpiIObaseEnd(); -#endif - unixIObaseEnd(); - genericBaseEnd(); - basePerformanceEnd(); - MaxHDFcallLevel = INT_MAX; -} -#endif /* PCF_BUILD */ -/*****************************************************************************/ -/* The HDFtraceXXXX routines are substitutes for the standard I/O routines. */ -/* When libhdf5-inst.a is compiled, macros in HDFTrace.h substitute the name */ -/* HDFtraceWrite for write, HDFtraceRead for Read, etc. These routines are */ -/* then called when standard I/O is done. */ -/*****************************************************************************/ -/*****************************************************************************/ -/*+ Open routines +*/ -/*+ ------------- +*/ -/*+ +*/ -/*+ Routine: FILE *HDFtraceFOPEN( const char *filename, const char *type ) +*/ -/*+ substitute for fopen() +*/ -/*+ generates fopenBeginID, fopenEndID +*/ -/*+ record Open (fopenBegin) +*/ -/*+ Mode = -1 +*/ -/*+ +*/ -/*****************************************************************************/ -FILE* -HDFtraceFOPEN( const char *filename, const char *type ) -{ - FILE *fp; -#ifdef PCF_BUILD - fp = (FILE *)traceFOPEN( filename, type ); -#else - int fd, id; - int flags = 0; - struct open_args openArgs; - size_t typeLen; - - if ( IOtracingEnabled ) - { - strcpy( openArgs.filename, filename ); - - /* check for 'b' - usually if 2 chars, second is '+' */ - typeLen = strlen( type ); - if ( ( typeLen == 2 ) && ( type [1] == 'b' ) ) - { - typeLen = 1; - } - - if ( typeLen == 1 ) - { - switch( type[0] ) - { - case 'r': - flags = flags | O_RDONLY; - break; - case 'w': - flags = O_TRUNC | O_CREAT | O_WRONLY; - break; - case 'a': - flags = flags | O_APPEND | O_CREAT | O_WRONLY; - break; - } - } - else - { - switch( type[0] ) - { - case 'r': - flags = O_RDWR; - break; - case 'w': - flags = O_TRUNC | O_CREAT | O_RDWR; - break; - case 'a': - flags = O_APPEND | O_CREAT | O_RDWR; - break; - } - } - openArgs.flags = flags; - openArgs.mode= -1; - - HDFtraceIOEvent( fopenBeginID, (void *)&openArgs, sizeof(openArgs) ); - } - - fp = fopen( filename, type ); - if ( fp != NULL ) - { - fd = fileno( fp ); - id = set_c_mappedID( fd ); - } - else - { - id = -1; - } - - if ( IOtracingEnabled ) - { - HDFtraceIOEvent( fopenEndID, (void *) &id, int_SIZE ); - } -#endif /* PCF_BUILD */ - return( fp ); -} - -/*****************************************************************************/ -/*+ Routine: int HDFtraceCREAT( const char *path, mode_t mode ) +*/ -/*+ substitute for creat() +*/ -/*+ generates openBeginID, openEndID +*/ -/*+ record Open (openBeginID) +*/ -/*+ +*/ -/*****************************************************************************/ -int -HDFtraceCREAT( const char *path, mode_t mode ) -{ - int fd; -#ifdef PCF_BUILD - fd = traceCREAT( path, mode ); -#else - struct open_args openArgs; - int id; - - if ( IOtracingEnabled ) { - strcpy( openArgs.filename, path ); - openArgs.flags = O_WRONLY | O_CREAT | O_TRUNC; - openArgs.mode = (int) mode; - - HDFtraceIOEvent( openBeginID, (void *)&openArgs, sizeof(openArgs) ); - } - - fd = creat( path, mode ); - id = set_c_mappedID( fd ); - - if ( IOtracingEnabled ) { - HDFtraceIOEvent( openEndID, (void *) &id, int_SIZE ); - } -#endif /* PCF_BUILD */ - return( fd ); -} - -/*****************************************************************************/ -/*+ Flush routines +*/ -/*+ -------------- +*/ -/*+ +*/ -/*+ Routine: int HDFtraceFFLUSH( FILE *stream ) +*/ -/*+ substitute for fflush() +*/ -/*+ generates fflushBeginID, fflushEndID +*/ -/*+ record Flush (fflushBeginID) +*/ -/*+ +*/ -/*****************************************************************************/ -int -HDFtraceFFLUSH( FILE *stream ) -{ - int ret; -#ifdef PCF_BUILD - ret = traceFFLUSH( stream ); -#else - int id; - int fd; - - if ( IOtracingEnabled ) - { - /* - * If stream is NULL, all files open for write are flushed. - * We show this with a -2 in the trace record as too much overhead - * to try and tell what files those are and generate individual - * trace records. - */ - if ( stream == NULL ) - { - id = -2; - } - else - { - fd = fileno( stream ); - id = c_mappedID( fd ); - HDFtraceIOEvent( fflushBeginID, (void *) 0, int_SIZE ); - } - } - - ret = fflush( stream ); - - if ( IOtracingEnabled ) - { - HDFtraceIOEvent( fflushEndID, (void *) &id, 0 ); - } - - /* - * Note that if fflush called on stream open for reading, the file pointer - * is moved to EOF if it isn't there already. We don't account for that - * in our file positioning information. - */ -#endif /* PCF_BUILD */ - return( ret ); -} - -/*****************************************************************************/ -/*+ Close routines +*/ -/*+ -------------- +*/ -/*+ +*/ -/*+ Routine: int HDFtraceFCLOSE( FILE *stream ) +*/ -/*+ substitute for fclose() +*/ -/*+ generates fcloseBeginID, fcloseEndID +*/ -/*+ record Close (fcloseBeginID) +*/ -/*+ +*/ -/*****************************************************************************/ -int -HDFtraceFCLOSE( FILE *stream ) -{ - int ret; -#ifdef PCF_BUILD - ret = traceFCLOSE( stream ); -#else - int id; - int fd = fileno( stream ); - - if ( IOtracingEnabled ) - { - id = c_mappedID( fd ); - HDFtraceIOEvent( fcloseBeginID, (void *) &id, int_SIZE ); - } - - ret = fclose( stream ); - - if ( IOtracingEnabled ) - { - HDFtraceIOEvent( fcloseEndID, (void *) 0, 0 ); - } -#endif /* PCF_BUILD */ - - return( ret ); -} - -/*****************************************************************************/ -/*+ Routine: int HDFtrace3OPEN( char *path, int flags, mode_t mode ) +*/ -/*+ substitute for open() when called with 3 arguments +*/ -/*+ generates openBeginID, openEndID +*/ -/*+ record Open (openBeginID) +*/ -/*+ +*/ -/*****************************************************************************/ -int -HDFtrace3OPEN( const char *path, int flags, mode_t mode ) -{ - int fd; -#ifdef PCF_BUILD - fd = trace3OPEN( path, flags, mode ); -#else - struct open_args openArgs; - int id; - - if ( IOtracingEnabled ) - { - strcpy( openArgs.filename, path ); - openArgs.flags = flags; - openArgs.mode = (int) mode; - - HDFtraceIOEvent( openBeginID, (char *)&openArgs, sizeof(openArgs) ); - } - - fd = open( path, flags, mode ); - id = set_c_mappedID( fd ); - - if ( IOtracingEnabled ) - { - HDFtraceIOEvent( openEndID, (char *) &id, int_SIZE ); - } -#endif /* PCF_BUILD */ - - return( fd ); -} - -/*****************************************************************************/ -/*+ Routine: int HDFtraceCLOSE( int fd ) +*/ -/*+ substitute for close() +*/ -/*+ generates closeBeginID, closeEndID +*/ -/*+ record Close (closeBeginID) +*/ -/*+ +*/ -/*****************************************************************************/ -int -HDFtraceCLOSE( int fd ) -{ - int ret; -#ifdef PCF_BUILD - ret = traceCLOSE( fd ); -#else - int id; - - if ( IOtracingEnabled ) - { - id = c_mappedID( fd ); - HDFtraceIOEvent( closeBeginID, (void *) &id, int_SIZE ); - } - - ret = close( fd ); - - if ( IOtracingEnabled ) - { - HDFtraceIOEvent( closeEndID, (void *) 0, 0 ); - } -#endif /* PCF_BUILD */ - - return( ret ); -} - -/*****************************************************************************/ -/*+ Read routines +*/ -/*+ ------------- +*/ -/*+ +*/ -/*+ Routine: int HDFtraceREAD( int fd, char *buf, int nbyte ) +*/ -/*+ substitute for read() +*/ -/*+ generates readBeginID, readEndID +*/ -/*+ record Read (readBeginID) +*/ -/*+ Number Variables = 1 +*/ -/*+ Cause = -1 +*/ -/*+ +*/ -/*****************************************************************************/ -ssize_t -HDFtraceREAD( int fd, void *buf, size_t nbyte ) -{ - ssize_t ret; -#ifdef PCF_BUILD - ret = traceREAD( fd, buf, nbyte ); -#else - struct read_write_args readArgs; - int bytes; - - if ( IOtracingEnabled ) - { - readArgs.fileID = c_mappedID( fd ); - readArgs.numVariables = 1; - readArgs.cause = -1; - - HDFtraceIOEvent( readBeginID, (void *) &readArgs, sizeof(readArgs) ); - } - - ret = read( fd, buf, nbyte ); - - if ( IOtracingEnabled ) - { - if ( ret > 0 ) - { - bytes = (int)ret; - } - else - { - bytes = 0; - } - HDFtraceIOEvent( readEndID, (void *) &bytes, int_SIZE ); - } -#endif /* PCF_BUILD */ - - return( ret ); -} - -/*****************************************************************************/ -/*+ Routine: int HDFtraceFREAD( char *ptr, int size, int nitems, +*/ -/*+ FILE *stream) +*/ -/*+ substitute for fread() +*/ -/*+ generates freadBeginID, freadEndID +*/ -/*+ record Read (freadBeginID) +*/ -/*+ Number Variables = nitems +*/ -/*+ Cause = -1 +*/ -/*+ +*/ -/*****************************************************************************/ -size_t -HDFtraceFREAD( void *ptr, size_t size, size_t nitems, FILE *stream ) -{ - size_t ret; -#ifdef PCF_BUILD - ret = traceFREAD( ptr, size, nitems, stream ); -#else - struct read_write_args readArgs; - int nbytes; - int fd = fileno( stream ); - - if ( IOtracingEnabled ) - { - readArgs.fileID = c_mappedID( fd ); - readArgs.numVariables = (int)nitems; - readArgs.cause = -1; - HDFtraceIOEvent( freadBeginID, (void *) &readArgs, sizeof(readArgs) ); - } - - ret = fread( ptr, size, nitems, stream ); - - if ( IOtracingEnabled ) - { - if ( ret > 0 ) - { - nbytes = (int)(ret * size) ; - } - else - { - nbytes = 0; - } - HDFtraceIOEvent( freadEndID, (void *) &nbytes, int_SIZE ); - } -#endif /* PCF_BUILD */ - - return( ret ); -} -/*****************************************************************************/ -/*+ Seek routines +*/ -/*+ ------------- +*/ -/*+ +*/ -/*+ Routine: off_t HDFtraceLSEEK( int fd, off_t offset, int whence ) +*/ -/*+ substitute for lseek() +*/ -/*+ generates lseekBeginID, lseekEndID +*/ -/*+ record Seek (lseekBeginID) +*/ -/*+ +*/ -/*****************************************************************************/ -off_t -HDFtraceLSEEK( int fd, off_t offset, int whence ) -{ - off_t ret; -#ifdef PCF_BUILD - ret = traceLSEEK( fd, offset, whence ); -#else - struct seek_args seekArgs; - long arg; - - if ( IOtracingEnabled ) - { - seekArgs.fileID = c_mappedID( fd ); - seekArgs.offset = (int) offset; - seekArgs.whence = whence; - - HDFtraceIOEvent( lseekBeginID, (void *) &seekArgs, sizeof(seekArgs) ); - } - - ret = lseek( fd, offset, whence ); - - if ( IOtracingEnabled ) - { - arg = (long) ret; - HDFtraceIOEvent( lseekEndID, (void *)&arg, long_SIZE ); - } -#endif /* PCF_BUILD */ - - return( ret ); -} - -/*****************************************************************************/ -/*+ routine: int HDF traceFSEEK( FILE *stream, long offset, int whence ) +*/ -/*+ substitute for fseek() +*/ -/*+ generates fseekBeginID, fseekEndID +*/ -/*+ record Seek (fseekBeginID) +*/ -/*+ +*/ -/*****************************************************************************/ -int -HDFtraceFSEEK( FILE *stream, long offset, int whence ) -{ - int ret; -#ifdef PCF_BUILD - ret = traceFSEEK( stream, offset, whence ); -#else - struct seek_args seekArgs; - long arg; - int fd = fileno( stream ); - - if ( IOtracingEnabled ) - { - seekArgs.fileID = c_mappedID( fd );; - seekArgs.offset = (int) offset; - seekArgs.whence = whence; - - HDFtraceIOEvent( fseekBeginID, (void *) &seekArgs, sizeof(seekArgs) ); - } - - ret = fseek( stream, offset, whence ); - - if ( IOtracingEnabled ) - { - arg = ftell( stream ); - HDFtraceIOEvent( fseekEndID, (void *)&arg, long_SIZE ); - } -#endif /* PCF_BUILD */ - - return( ret ); -} - -#ifdef fpos_t -/*****************************************************************************/ -/*+ Routine: int HDFtraceFSETPOS( FILE *stream, const fpos_t *position ) +*/ -/*+ substitute for fsetpos() +*/ -/*+ generates fsetposBeginID, fsetposEndID +*/ -/*+ record Seek (fsetposBeginID) +*/ -/*+ +*/ -/*****************************************************************************/ -int -HDFtraceFSETPOS( FILE stream, const fpos_t *position ) -{ - int ret; -#ifdef PCF_BUILD - ret = traceFSETPOS( stream, position ); -#else - struct seek_args seekArgs; - long arg; - int fd = fileno( stream ); - - if ( IOtracingEnabled ) - { - seekArgs.fileID = c_mappedID( fd );; - seekArgs.offset = (int) *position; - seekArgs.whence = SEEK_SET; - - HDFtraceIOEvent( fsetposBeginID, (void *) &seekArgs, sizeof(seekArgs) ); - } - - ret = fsetpos( stream, position ); - - if ( IOtracingEnabled ) - { - arg = (long) *position; - HDFtraceIOEvent( fsetposEndID, (void *)&arg, long_SIZE ); - } -#endif /* PCF_BUILD */ - - return( ret ); -} -#endif /* fpos_t */ - -/*****************************************************************************/ -/*+ Routine: void HDFtraceREWIND ( FILE *stream ) +*/ -/*+ substitute for rewind() +*/ -/*+ generates rewindBeginID, rewindEndID +*/ -/*+ record Seek (rewindBeginID) +*/ -/*+ Offset = 0 +*/ -/*+ Whence = SEEK_SET +*/ -/*+ +*/ -/*****************************************************************************/ -void -HDFtraceREWIND( FILE *stream ) -{ -#ifdef PCF_BUILD - traceREWIND( stream ); -#else - long arg; - struct seek_args seekArgs; - int fd = fileno( stream ); - - if ( IOtracingEnabled ) - { - seekArgs.fileID = c_mappedID( fd ); - seekArgs.offset = 0; - seekArgs.whence = SEEK_SET; - - HDFtraceIOEvent( rewindBeginID, (void *) &seekArgs, sizeof(seekArgs) ); - } - - rewind( stream ); - - if ( IOtracingEnabled ) - { - arg = 0; - HDFtraceIOEvent( rewindEndID, (void *)&arg, long_SIZE ); - } -#endif /* PCF_BUILD */ - - return; -} - -/*****************************************************************************/ -/*+ Write routines +*/ -/*+ -------------- +*/ -/*+ +*/ -/*+ Routine: int HDFtraceWRITE( int fd, char *buf, int nbyte ) +*/ -/*+ substitute for write() +*/ -/*+ generates writeBeginID, writeEndID +*/ -/*+ record Write (writeBeginID) +*/ -/*+ Number Variables = 1 +*/ -/*+ Cause = -1 +*/ -/*+ +*/ -/*****************************************************************************/ -ssize_t -HDFtraceWRITE( int fd, const void *buf, size_t nbyte ) -{ - ssize_t ret; -#ifdef PCF_BUILD - ret = traceWRITE( fd, buf, nbyte ); -#else - struct read_write_args writeArgs; - int bytes; - - if ( IOtracingEnabled ) - { - writeArgs.fileID = c_mappedID( fd ); - writeArgs.numVariables = 1; - writeArgs.cause = -1; - - HDFtraceIOEvent( writeBeginID, (void *) &writeArgs, sizeof(writeArgs) ); - } - - ret = write( fd, buf, nbyte ); - - if ( IOtracingEnabled ) - { - if ( ret > 0 ) - { - bytes = (int)ret; - } - else - { - bytes = 0; - } - HDFtraceIOEvent( writeEndID, (void *) &bytes, int_SIZE ); - } -#endif /* PCF_BUILD */ - return( ret ); -} - -/*****************************************************************************/ -/*+ Routine: size_t HDFtraceFWRITE( const char *ptr, int size, int nitems,+*/ -/*+ FILE *stream ) +*/ -/*+ substitute for fwrite() +*/ -/*+ generates fwriteBeginID, fwriteEndID +*/ -/*+ record Write (fwriteBeginID) +*/ -/*+ Number Variables = nitems +*/ -/*+ Cause = -1 +*/ -/*+ +*/ -/*****************************************************************************/ -size_t -HDFtraceFWRITE(const void *ptr,size_t size,size_t nitems,FILE *stream ) - -{ - size_t ret; -#ifdef PCF_BUILD - ret = traceFWRITE( ptr, size, nitems, stream ); -#else - struct read_write_args writeArgs; - int nbytes; - int fd = fileno( stream ); - - if ( IOtracingEnabled ) - { - writeArgs.fileID = c_mappedID( fd ); - writeArgs.numVariables = (int)nitems; - writeArgs.cause = -1; - - HDFtraceIOEvent(fwriteBeginID, (void *)&writeArgs, sizeof(writeArgs)); - } - - ret = fwrite( ptr, size, nitems, stream ); - - if ( IOtracingEnabled ) - { - if ( ret > 0 ) - { - nbytes = (int)(ret * size) ; - } - else - { - nbytes = 0; - } - HDFtraceIOEvent( fwriteEndID, (void *) &nbytes, int_SIZE ); - } -#endif /* PCF_BUILD */ - - return( ret ); -} -/*****************************************************************************/ -/*+ Routine: int HDFtracePUTS( char *s ) +*/ -/*+ substitute for puts() +*/ -/*+ generates fwriteBeginID, fwriteEndID +*/ -/*+ record Write (fwriteBeginID) +*/ -/*+ Number Variables = 1 +*/ -/*+ Cause = -1 +*/ -/*+ +*/ -/*****************************************************************************/ -int -HDFtracePUTS( const char *s ) -{ - int ret; -#ifdef PCF_BUILD - ret = tracePUTS( s ); -#else - int fd = fileno( stdout ); - struct read_write_args writeArgs; - if ( IOtracingEnabled ) - { - writeArgs.fileID = c_mappedID( fd ); - writeArgs.numVariables = 1; - writeArgs.cause = -1; - - HDFtraceIOEvent( fwriteBeginID, (void *) &writeArgs, sizeof(writeArgs) ); - } - - ret = puts( s ); - - if ( IOtracingEnabled ) - { - HDFtraceIOEvent( fwriteEndID, (void *) &ret, int_SIZE ); - } -#endif - - return( ret ); -} - -void getHDFprocName ( int i, char buff[81] ) -{ - strcpy( buff, HDFprocNames[i] ); -} - -/*****************************************************************************/ -/*+ Routine: int HDFtraceFPUTC( int c, FILE *stream ) +*/ -/*+ substitute for fputc() +*/ -/*+ generates fwriteBeginID, fwriteEndID +*/ -/*+ record Write (fwriteBeginID) +*/ -/*+ Number Variables = 1 +*/ -/*+ Cause = -1 +*/ -/*+ +*/ -/*****************************************************************************/ -int -HDFtraceFPUTC( int c, FILE *stream ) -{ - int ret; -#ifdef PCF_BUILD - ret = traceFPUTC( c, stream ); -#else - struct read_write_args writeArgs; - int nbytes = char_SIZE; - int fd = fileno( stream ); - - if ( IOtracingEnabled ) - { - writeArgs.fileID = c_mappedID( fd ); - writeArgs.numVariables = 1; - writeArgs.cause = -1; - - HDFtraceIOEvent( fwriteBeginID, (void *) &writeArgs, sizeof(writeArgs) ); - } - - ret = fputc( c, stream ); - - if ( IOtracingEnabled ) - { - if ( ret == EOF ) - { - nbytes = 0; - HDFtraceIOEvent( fwriteEndID, (void *) &nbytes, int_SIZE ); - } - } -#endif /* PCF_BUILD */ - return( ret ); -} -/*****************************************************************************/ -/*+ Routine: int HDFtraceFPUTS( char *s, FILE *stream ) +*/ -/*+ substitute for fputs() +*/ -/*+ generates fwriteBeginID, fwriteEndID +*/ -/*+ record Write (fwriteBeginID) +*/ -/*+ Number Variables = 1 +*/ -/*+ Cause = -1 +*/ -/*+ +*/ -/*****************************************************************************/ -int HDFtraceFPUTS( const char *s, FILE *stream ) -{ - int ret; - -#ifdef PCF_BUILD - ret = traceFPUTS( s, stream ); -#else - int fd = fileno( stream ); - struct read_write_args writeArgs; - if ( IOtracingEnabled ) - { - writeArgs.fileID = c_mappedID( fd ); - writeArgs.numVariables = 1; - writeArgs.cause = -1; - - HDFtraceIOEvent(fwriteBeginID, (void *)&writeArgs, sizeof(writeArgs)); - } - - ret = fputs( s, stream ); - - if ( IOtracingEnabled ) - { - HDFtraceIOEvent( fwriteEndID, (void *) &ret, int_SIZE ); - } -#endif /* PCF_BUILD */ - - return( ret ); -} - -void* -HDFtraceMALLOC(size_t bytes ) -{ - void *ptr; -#ifdef PCF_BUILD - ptr = (void *)traceMALLOC( bytes ); -#else - int byte_req; - byte_req = (int)bytes; - if ( IOtracingEnabled ) - { - HDFtraceIOEvent ( ID_malloc, NULL, 0 ); - } - - ptr = malloc( bytes ); - - if ( IOtracingEnabled ) - { - HDFtraceIOEvent ( -ID_malloc, &byte_req, sizeof(int) ); - } -#endif /* PCF_BUILD */ - - return ptr ; - -} - -#ifndef PCF_BUILD -void -HDFtraceIOEvent( int eventType, void *dataPtr, unsigned dataLen ) -{ - if ( OUTPUT_SWITCH == RUNTIME_TRACE - || OUTPUT_SWITCH == MPI_RUNTIME_TRACE ) - { - traceEvent( eventType, dataPtr, dataLen ); - } - else - { - HDFtraceEvent_RT( eventType, (HDFsetInfo *)dataPtr, dataLen ); - } -} -/*======================================================================* -// record the final time stamp * -//======================================================================*/ -void -HDFfinalTimeStamp( void ) -{ - CLOCK currentTime; - double seconds; - struct { - int packetLength, - packetType, - packetTag, - timeDim; - double Seconds; - int eventID, - node, - dataLen; - } Packet; - - currentTime = getClock(); - seconds = clockToSeconds( currentTime ); - - Packet.packetLength = sizeof(Packet); - Packet.packetType = PKT_DATA; - Packet.packetTag = FAMILY_EXTERNAL | RECORD_TRACE; - Packet.timeDim = 0; /* use fp time stamp only */ - Packet.Seconds = seconds; /* fp time stamp */ - Packet.eventID = ID_timeStamp; - Packet.node = TRgetNode(); - Packet.dataLen = 0; - putBytes( (void *)&Packet , sizeof(Packet) ); -} -/*======================================================================* -// This Program is called to specify which routines are to be traced. * -// On first entry, the program allocates storage for and initializes a * -// global array procTrace. The array has one element for each possible * -// HDF procedure and HDF library file. If a procedure or all of the * -// procedure in an HDF file are to be traced, then the elemen in the * -// array corresponding to the procedure or file is turned on. This is * -// used by the macros TRACE_ON and TRACE_OFF to enable tracing. If * -// this procedure is not called prior to initialization, then all of * -// the elements of procTrace corresponding to HDF files will be * -// turned on, in which case all HDF procedures will be traced. * -//======================================================================*/ -void -PabloHDFTrace( int ID ) -{ - int i; - if ( procTrace == NULL ) { - procTrace = ( int * ) malloc( NUM_HDF_IDS*sizeof(int) ); - if ( procTrace == NULL ) { - fprintf(stderr,">> Error: Unable to allocate procTrace "); - fprintf(stderr,"array in program PabloHDFTrace. <<<\n"); - fprintf(stderr," Exiting program. <<<\n"); - exit (-1); - } - for ( i = 0; i < NUM_HDF_IDS; ++i ) { - procTrace[i] = 0; - } - } - if ( ID >= 0 && ID < NUM_HDF_IDS ) { - procTrace[ID] = 1; - } else { - fprintf(stderr,">> Error: Value passed to PabloHDFTrace, "); - fprintf(stderr,"%d, is out of range. <<<\n",ID); - fprintf(stderr," Exiting program. <<<\n"); - exit (-1); - } -} -#endif /* PCF_BUILD */ diff --git a/pablo/PabloHDF_MPIO.c b/pablo/PabloHDF_MPIO.c deleted file mode 100644 index 025e823..0000000 --- a/pablo/PabloHDF_MPIO.c +++ /dev/null @@ -1,1366 +0,0 @@ -/* - * This file is an extension to NCSA HDF to enable the use of the - * Pablo trace library. - * - * Developed by: The TAPESTRY Parallel Computing Laboratory - * University of Illinois at Urbana-Champaign - * Department of Computer Science - * 1304 W. Springfield Avenue - * Urbana, IL 61801 - * - * Copyright (c) 1995 - * The University of Illinois Board of Trustees. - * All Rights Reserved. - * - * PABLO is a registered trademark of - * The Board of Trustees of the University of Illinois - * registered in the U.S. Patent and Trademark Office. - * - * Author: George Xin Zhou (xzhou@cs.uiuc.edu) - * Contributing Author: Jonathan M. Reid (jreid@cs.uiuc.edu) - * - * Project Manager and Principal Investigator: - * Daniel A. Reed (reed@cs.uiuc.edu) - * - * Funded by: National Aeronautics and Space Administration under NASA - * Contracts NAG-1-613 and USRA 5555-22 and by the Advanced Research - * Projects Agency under ARPA contracts DAVT63-91-C-0029 and - * DABT63-93-C-0040. - * - */ -/*======================================================================* -// File: PabloHDF_MPIO.c * -// Purpose: support use of Pablo trace library to analyze MPIO calls * -// within HDF calls * -// Most of the code is conditionally compiled dependent on the compiler * -// flag HAVE_H5_PARALLEL which is set in the Makefile in thie hdf/pablo * -// directory. * -// Contents -// HDF_get_NodeNum * -// -// HDF_get_mode * -// returns the node number * -// -// HDF_get_source * -// -// HDF_get_comm -// -// HDF_get_Datatype -// -// HDF_get_DataRep -// -// int HDF_get_Bytes -// -// int PabloMPI_File_open -// -// int PabloMPI_File_close -// -// int PabloMPI_File_set_size -// -// int PabloMPI_File_get_size -// -// int PabloMPI_File_set_view -// -// int PabloMPI_File_get_view -// -// int PabloMPI_File_read_at -// -// int PabloMPI_File_read_at_all -// -// int PabloMPI_File_write_at -// -// int PabloMPI_File_write_at_all -// -// int PabloMPI_File_sync -// -// int HDF_MPI_File_open -// -// int HDF_MPI_File_close -// -// int HDF_MPI_File_set_size -// -// int HDF_MPI_File_get_size -// -// int HDF_MPI_File_set_view -// -// int HDF_MPI_File_get_view -// -// int HDF_MPI_File_read_at -// -// int HDF_MPI_File_read_at_all -// -// int HDF_MPI_File_write_at -// -// int HDF_MPI_File_write_at_all -// -// int HDF_MPI_File_sync -// -//======================================================================*/ -#ifdef H5_HAVE_PARALLEL -void HDFtraceEvent_RT( int , char *, unsigned ) ; -#include "mpi.h" -/************************************************************************/ -/* Return the node number. */ -/************************************************************************/ -void HDF_get_NodeNum( int* nodeNum ) -{ - MPI_Comm_rank( MPI_COMM_WORLD, nodeNum ); -} -#ifdef _BUILD -#include "HDFTrace.h" -#include "ProcTrace.h" -#include "ProcIDs.h" -#include "MPIO_Trace.h" -#include "MPIO_EventArgs.h" -#include "MPIO_Data.h" - -extern int OUTPUT_SWITCH; -/* Global variable declarations and definitions. */ -static int HDFlocalNode = 0; -int HDFmyNode; -int myHDFid = 3; -/* Function prototypes */ -int HDF_get_mode( int ); -int HDF_get_source( int ); -int HDF_get_comm( MPI_Comm ); -int HDF_get_Datatype( MPI_Datatype ); -int HDF_get_DataRep( char* ); -int HDF_get_Bytes( MPI_Datatype, int ); -void HDFtraceIOEvent( int , void *, unsigned ); - -/* Get the mode at the file openning */ -int -HDF_get_mode( int amode ) -{ - if( amode == MPI_MODE_RDONLY || amode == MPI_MODE_RDWR || - amode == MPI_MODE_WRONLY || amode == MPI_MODE_CREATE || - amode == MPI_MODE_EXCL || amode == MPI_MODE_DELETE_ON_CLOSE || - amode == MPI_MODE_UNIQUE_OPEN || - /* amode == MPI_MODE_SEQUENTIAL || */ - amode == MPI_MODE_APPEND ) - return amode; - else - return PABLO_MPI_MODE_NULL; -} - -/* Get the node number */ -int -HDF_get_source( int source ) -{ - if ( source == MPI_ANY_SOURCE ) { - return PABLO_MPI_ANYSOURCE; - } - - if ( source == MPI_PROC_NULL ) { - return PABLO_MPI_PROCNULL; - } - - else { - return source; - } -} - -/* get the communicator ID */ -/* this is dummy for compatability with MPIO Traceing */ -int -HDF_get_comm( MPI_Comm in_comm ) -{ - return 0; -} -/* Get the MPI_Datatype (mapped to a integer) */ -int HDF_get_Datatype( MPI_Datatype datatype ) -{ - /* elementary datatypes (C) */ - if ( datatype == MPI_CHAR ) - return PABLO_MPI_CHAR; - else if ( datatype == MPI_SHORT ) - return PABLO_MPI_SHORT; - else if ( datatype == MPI_INT ) - return PABLO_MPI_INT; - else if ( datatype == MPI_LONG ) - return PABLO_MPI_LONG; - else if ( datatype == MPI_UNSIGNED_CHAR ) - return PABLO_MPI_UNSIGNED_CHAR; - else if ( datatype == MPI_UNSIGNED_SHORT ) - return PABLO_MPI_UNSIGNED_SHORT; - else if ( datatype == MPI_UNSIGNED ) - return PABLO_MPI_UNSIGNED; - else if ( datatype == MPI_UNSIGNED_LONG ) - return PABLO_MPI_UNSIGNED_LONG; - else if ( datatype == MPI_FLOAT ) - return PABLO_MPI_FLOAT; - else if ( datatype == MPI_DOUBLE ) - return PABLO_MPI_DOUBLE; - else if ( datatype == MPI_LONG_DOUBLE ) - return PABLO_MPI_LONG_DOUBLE; - - /* elementary datatypes (FORTRAN) */ -#ifdef MPI_INTEGER - else if ( datatype == MPI_INTEGER ) - return PABLO_MPI_INTEGER; -#endif -#ifdef MPI_REAL - else if ( datatype == MPI_REAL ) - return PABLO_MPI_REAL; -#endif -#ifdef MPI_DOUBLE_PRECISION - else if ( datatype == MPI_DOUBLE_PRECISION ) - return PABLO_MPI_DOUBLE_PRECISION; -#endif -#ifdef MPI_COMPLEX - else if ( datatype == MPI_COMPLEX ) - return PABLO_MPI_COMPLEX; -#endif -#ifdef MPI_DOUBLE_COMPLEX - else if ( datatype == MPI_DOUBLE_COMPLEX ) - return PABLO_MPI_DOUBLE_COMPLEX; -#endif -#ifdef MPI_LOGICAL - else if ( datatype == MPI_LOGICAL ) - return PABLO_MPI_LOGICAL; -#endif -#ifdef MPI_CHARACTER - else if ( datatype == MPI_CHARACTER ) - return PABLO_MPI_CHARACTER; -#endif - - /* other datatypes (C, Fortran).*/ - else if ( datatype == MPI_BYTE ) - return PABLO_MPI_BYTE; - else if ( datatype == MPI_PACKED ) - return PABLO_MPI_PACKED; - else if ( datatype == MPI_LB ) - return PABLO_MPI_LB; - else if ( datatype == MPI_UB ) - return PABLO_MPI_UB; - - - /* reduction datatypes (C). */ - else if ( datatype == MPI_FLOAT_INT ) - return PABLO_MPI_FLOAT_INT; - else if ( datatype == MPI_DOUBLE_INT ) - return PABLO_MPI_DOUBLE_INT; - else if ( datatype == MPI_LONG_INT ) - return PABLO_MPI_LONG_INT; - else if ( datatype == MPI_2INT ) - return PABLO_MPI_2INT; - else if ( datatype == MPI_SHORT_INT ) - return PABLO_MPI_SHORT_INT; - else if ( datatype == MPI_LONG_DOUBLE_INT ) - return PABLO_MPI_LONG_DOUBLE_INT; - - /* Reduction datatypes (FORTRAN) */ -#ifdef MPI_2REAL - else if ( datatype == MPI_2REAL ) - return PABLO_MPI_2REAL; -#endif -#ifdef MPI_2DOUBLE_PRECISION - else if ( datatype == MPI_2DOUBLE_PRECISION ) - return PABLO_MPI_2DOUBLE_PRECISION; -#endif -#ifdef MPI_2INTEGER - else if ( datatype == MPI_2INTEGER ) - return PABLO_MPI_2INTEGER; -#endif - -#ifdef MPI_2COMPLEX - else if ( datatype == MPI_2COMPLEX ) - return PABLO_MPI_2COMPLEX; -#endif -#ifdef MPI_2DOUBLE_COMPLEX - else if ( datatype == MPI_2DOUBLE_COMPLEX ) - return PABLO_MPI_2DOUBLE_COMPLEX; -#endif - -/* optional datatypes (C).*/ -#ifdef MPI_LONG_LONG_INT - else if ( datatype == MPI_LONG_LONG_INT ) - return PABLO_MPI_LONG_LONG_INT; -#endif - else if ( datatype == MPI_DATATYPE_NULL ) - return PABLO_MPI_DATATYPE_NULL; - else - return PABLO_MPI_USER_DEF; -} - -/* data representations */ -int HDF_get_DataRep( char* datarep ) -{ - if ( !strcmp( datarep, "native" ) ) - return PABLO_MPI_NATIVE; - else if ( !strcmp( datarep, "internal" ) ) - return PABLO_MPI_INTERNAL; - else if ( !strcmp( datarep, "external32" ) ) - return PABLO_MPI_EXTERNAL32; - else - return (-1); -} - -/*****************************************************************************/ -/* The routines below are there to bypass the MPI I/O Tracing. When MPI I/O */ -/* tracing is done with a nonstandard MPI I/O implementation, problems can */ -/* occur in linking and in data recording. */ -/* For each of the MPI I/O routines MPI_File_xxx used in HDF, there are two */ -/* entries: HDF_MPI_File_xxx and PabloMPI_File_xxx. Macros replace the */ -/* MPI_File_xxx call with HDF_MPI_File_xxx. */ -/* If SUMMARY Tracing is used */ -/* HDF_MPI_File_xxx routine will record entry data in a table, call the */ -/* IF RUNTIME Tracing is used */ -/* HDF_MPI_File_xxx routine calls PabloMPI_File_xxx. This routine writes */ -/* data to the trace file, calls the standard MPI_File_xxx routine, then */ -/* records exit data to a trace file. */ -/* The PabloMPI_File_xxx functionality could have been incorporated into the */ -/* HDF_MPI_File_xxx routine, but was not done so for expediency. */ -/*****************************************************************************/ -int PabloMPI_File_open( MPI_Comm comm, - char *filename, - int amode, - MPI_Info info, - MPI_File *fh ) ; - -int PabloMPI_File_close( MPI_File *fh ) ; - -int PabloMPI_File_set_size( MPI_File fh, MPI_Offset size ) ; - -int PabloMPI_File_get_size( MPI_File fh, MPI_Offset *size ) ; - -int PabloMPI_File_set_view( MPI_File fh, - MPI_Offset disp, - MPI_Datatype etype, - MPI_Datatype filetype, - char *datarep, - MPI_Info info ) ; - -int PabloMPI_File_get_view( MPI_File fh, - MPI_Offset *disp, - MPI_Datatype *etype, - MPI_Datatype *filetype, - char *datarep ) ; - -int PabloMPI_File_read_at( MPI_File fh, - MPI_Offset offset, - void *buf, - int count, - MPI_Datatype datatype, - MPI_Status *status ) ; - -int PabloMPI_File_read_at_all( MPI_File fh, - MPI_Offset offset, - void *buf, - int count, - MPI_Datatype datatype, - MPI_Status *status ) ; - -int PabloMPI_File_write_at( MPI_File fh, - MPI_Offset offset, - void *buf, - int count, - MPI_Datatype datatype, - MPI_Status *status ) ; - -int PabloMPI_File_write_at_all( MPI_File fh, - MPI_Offset offset, - void *buf, - int count, - MPI_Datatype datatype, - MPI_Status *status ) ; - -int PabloMPI_File_sync( MPI_File fh ) ; - -/*======================================================================* -// Pass call through to regular MPIO entry except in case of Real Time * -// tracing. * -// Note: The regular MPIO entry may or may not be instrumented. * -//======================================================================*/ -int -HDF_MPI_File_open( MPI_Comm comm, - char *filename, - int amode, - MPI_Info info, - MPI_File *fh ) -{ - int returnVal; - HDFsetInfo dataPtr; - int dataLen; - - if ( OUTPUT_SWITCH != MPI_SUMMARY_TRACE ) - { - returnVal = PabloMPI_File_open( comm, filename, amode, info, fh ); - } - else - { - dataLen = sizeof( HDFsetInfo ); - dataPtr.setID = 0; - dataPtr.setName = (char *)malloc( strlen(filename) + 1); - strcpy( dataPtr.setName , filename ); - HDFtraceEvent_RT( HDFmpiOpenID, &dataPtr, dataLen ); - returnVal = MPI_File_open( comm, filename, amode, info, fh ); - dataPtr.setID = (long)fh; - HDFtraceEvent_RT( -HDFmpiOpenID, &dataPtr, dataLen ); - } - return returnVal; -} - - - -/*======================================================================* -// Pass call through to regular MPIO entry except in case of Real Time * -// tracing. * -// Note: The regular MPIO entry may or may not be instrumented. * -//======================================================================*/ -int -HDF_MPI_File_close( MPI_File *fh ) -{ - int returnVal; - HDFsetInfo dataPtr; - int dataLen; - - if ( OUTPUT_SWITCH != MPI_SUMMARY_TRACE ) - { - returnVal = PabloMPI_File_close( fh ); - } - else - { - dataLen = sizeof( HDFsetInfo ); - dataPtr.setID = (long)fh; - dataPtr.setName = NULL; - HDFtraceEvent_RT( HDFmpiCloseID, &dataPtr, dataLen ); - returnVal = MPI_File_close( fh ); - HDFtraceEvent_RT( -HDFmpiCloseID, &dataPtr, dataLen ); - free( dataPtr.setName ); - } - return returnVal; -} - - -/*======================================================================* -// Pass call through to regular MPIO entry except in case of Real Time * -// tracing. * -// Note: The regular MPIO entry may or may not be instrumented. * -//======================================================================*/ -int -HDF_MPI_File_set_size( MPI_File fh, MPI_Offset size ) -{ - int returnVal; - HDFsetInfo dataPtr; - int dataLen; - - if ( OUTPUT_SWITCH != MPI_SUMMARY_TRACE ) - { - returnVal = PabloMPI_File_set_size( fh, size ); - } - else - { - dataLen = 1; - dataPtr.setID = (long)fh; - HDFtraceEvent_RT( HDFmpiSetSizeID,&dataPtr,dataLen ); - returnVal = MPI_File_set_size( fh, size ); - HDFtraceEvent_RT( -HDFmpiSetSizeID, &dataPtr, dataLen ); - } - return returnVal; -} - -/*======================================================================* -// Pass call through to regular MPIO entry except in case of Real Time * -// tracing. * -// Note: The regular MPIO entry may or may not be instrumented. * -//======================================================================*/ -int -HDF_MPI_File_get_size( MPI_File fh, MPI_Offset *size ) -{ - int returnVal; - HDFsetInfo dataPtr; - int dataLen; - - if ( OUTPUT_SWITCH != MPI_SUMMARY_TRACE ) { - returnVal = PabloMPI_File_get_size( fh, size); - } else { - dataLen = 1; - dataPtr.setID = (long)fh; - HDFtraceEvent_RT( HDFmpiGetSizeID, - &dataPtr,dataLen ); - returnVal = MPI_File_get_size( fh, size); - HDFtraceEvent_RT( -HDFmpiGetSizeID, - &dataPtr,dataLen ); - } - return returnVal; -} - -/*======================================================================* -// Pass call through to regular MPIO entry except in case of Real Time * -// tracing. * -// Note: The regular MPIO entry may or may not be instrumented. * -//======================================================================*/ -int -HDF_MPI_File_set_view( MPI_File fh, - MPI_Offset disp, - MPI_Datatype etype, - MPI_Datatype filetype, - char *datarep, - MPI_Info info ) -{ - int returnVal; - HDFsetInfo dataPtr; - int dataLen; - - if ( OUTPUT_SWITCH != MPI_SUMMARY_TRACE ) - { - returnVal = PabloMPI_File_set_view( fh, disp, etype, filetype, - datarep, info ); - } - else - { - dataLen = 1; - dataPtr.setID = (long)fh; - HDFtraceEvent_RT( HDFmpiSetViewID, - &dataPtr,dataLen ); - returnVal = MPI_File_set_view( fh, disp, etype, filetype, - datarep, info ); - HDFtraceEvent_RT( -HDFmpiSetViewID, - &dataPtr,dataLen ); - } - return returnVal; -} - -/*======================================================================* -// Pass call through to regular MPIO entry except in case of Real Time * -// tracing. * -// Note: The regular MPIO entry may or may not be instrumented. * -//======================================================================*/ -int -HDF_MPI_File_get_view( MPI_File fh, - MPI_Offset *disp, - MPI_Datatype *etype, - MPI_Datatype *filetype, - char *datarep ) -{ - int returnVal; - HDFsetInfo dataPtr; - int dataLen; - - if ( OUTPUT_SWITCH != MPI_SUMMARY_TRACE ) - { - returnVal = PabloMPI_File_get_view(fh, disp, etype, filetype, datarep); - } - else - { - dataLen = 1; - dataPtr.setID = (long)fh; - HDFtraceEvent_RT( HDFmpiSetViewID, &dataPtr,dataLen ); - returnVal = MPI_File_get_view(fh, disp, etype, filetype, datarep); - HDFtraceEvent_RT( -HDFmpiSetViewID, &dataPtr,dataLen ); - returnVal = MPI_File_get_view(fh, disp, etype, filetype, datarep); - - } - return returnVal; -} - -/*======================================================================* -// Pass call through to regular MPIO entry except in case of Real Time * -// tracing. * -// Note: The regular MPIO entry may or may not be instrumented. * -//======================================================================*/ -int HDF_MPI_File_read_at( MPI_File fh, - MPI_Offset offset, - void *buf, - int count, - MPI_Datatype datatype, - MPI_Status *status ) -{ - int returnVal; - HDFsetInfo dataPtr; - int dataLen; - int rCount; - - if ( OUTPUT_SWITCH != MPI_SUMMARY_TRACE ) - { - returnVal = PabloMPI_File_read_at( fh, - offset, - buf, - count, - datatype, - status ); - } - else - { - dataLen = sizeof(dataPtr); - dataPtr.setID = (long)fh; - dataPtr.numBytes = HDF_get_Bytes( datatype, count ); - HDFtraceEvent_RT( HDFmpiReadAtID, - &dataPtr,dataLen ); - returnVal = MPI_File_read_at( fh, - offset, - buf, - count, - datatype, - status ); - MPI_Get_count(status,datatype,&rCount); - if ( rCount < 0 || rCount > count ) - { - dataPtr.numBytes = -1; - } - else - { - dataPtr.numBytes = HDF_get_Bytes( datatype, rCount ); - } - HDFtraceEvent_RT( -HDFmpiReadAtID, - &dataPtr,dataLen ); - } - return returnVal; -} - -/*======================================================================* -// Pass call through to regular MPIO entry except in case of Real Time * -// tracing. * -// Note: The regular MPIO entry may or may not be instrumented. * -//======================================================================*/ -int -HDF_MPI_File_read_at_all( MPI_File fh, - MPI_Offset offset, - void *buf, - int count, - MPI_Datatype datatype, - MPI_Status *status ) -{ - - int returnVal; - HDFsetInfo dataPtr; - int dataLen; - int rCount; - - if ( OUTPUT_SWITCH != MPI_SUMMARY_TRACE ) - { - returnVal = PabloMPI_File_read_at_all( fh, - offset, - buf, - count, - datatype, - status ); - } - else - { - dataLen = sizeof(dataPtr); - dataPtr.setID = (long)fh; - dataPtr.numBytes = HDF_get_Bytes( datatype, count ); - HDFtraceEvent_RT( HDFmpiReadAtAllID, - &dataPtr,dataLen ); - returnVal = MPI_File_read_at_all( fh, - offset, - buf, - count, - datatype, - status ); - MPI_Get_count(status,datatype,&rCount); - if ( rCount < 0 || rCount > count ) - { - dataPtr.numBytes = -1; - } - else - { - dataPtr.numBytes = HDF_get_Bytes( datatype, rCount ); - } - HDFtraceEvent_RT( -HDFmpiReadAtAllID, - &dataPtr,dataLen ); - } - return returnVal; -} - -/*======================================================================* -// Pass call through to regular MPIO entry except in case of Real Time * -// tracing. * -// Note: The regular MPIO entry may or may not be instrumented. * -//======================================================================*/ -int -HDF_MPI_File_write_at( MPI_File fh, - MPI_Offset offset, - void *buf, - int count, - MPI_Datatype datatype, - MPI_Status *status ) -{ - - int returnVal; - HDFsetInfo dataPtr; - int dataLen; - int rCount; - - if ( OUTPUT_SWITCH != MPI_SUMMARY_TRACE ) - { - returnVal = PabloMPI_File_write_at( fh, - offset, - buf, - count, - datatype, - status ); - } - else - { - dataLen = sizeof(dataPtr); - dataPtr.setID = (long)fh; - dataPtr.numBytes = HDF_get_Bytes( datatype, count ); - HDFtraceEvent_RT( HDFmpiWriteAtID, &dataPtr,dataLen ); - returnVal = MPI_File_write_at( fh, - offset, - buf, - count, - datatype, - status ); - MPI_Get_count(status,datatype,&rCount); - if ( rCount < 0 || rCount > count ) - { - dataPtr.numBytes = -1; - } - else - { - dataPtr.numBytes = HDF_get_Bytes( datatype, rCount ); - } - HDFtraceEvent_RT( -HDFmpiWriteAtID, &dataPtr,dataLen ); - } - return returnVal; -} - -/*======================================================================* -// Pass call through to regular MPIO entry except in case of Real Time * -// tracing. * -// Note: The regular MPIO entry may or may not be instrumented. * -//======================================================================*/ -int -HDF_MPI_File_write_at_all( MPI_File fh, - MPI_Offset offset, - void *buf, - int count, - MPI_Datatype datatype, - MPI_Status *status ) -{ - int returnVal; - HDFsetInfo dataPtr; - int dataLen; - int numBytes; - - if ( OUTPUT_SWITCH != MPI_SUMMARY_TRACE ) - { - returnVal = PabloMPI_File_write_at_all( fh, - offset, - buf, - count, - datatype, - status ); - } - else - { - dataLen = sizeof(dataPtr); - dataPtr.setID = (long)fh; - dataPtr.numBytes = HDF_get_Bytes( datatype, count ); - HDFtraceEvent_RT( HDFmpiWriteAtAllID, &dataPtr, dataLen ); - returnVal = MPI_File_write_at_all( fh, - offset, - buf, - count, - datatype, - status ); - if ( returnVal == MPI_SUCCESS ) - { - numBytes = HDF_get_Bytes( datatype, count ); - } - else - { - numBytes = -1; - } - dataPtr.numBytes = numBytes; - HDFtraceEvent_RT( -HDFmpiWriteAtAllID, - &dataPtr,dataLen ); - } - return returnVal; -} - -/*======================================================================* -// Pass call through to regular MPIO entry except in case of Real Time * -// tracing. * -// Note: The regular MPIO entry may or may not be instrumented. * -//======================================================================*/ -int -HDF_MPI_File_sync( MPI_File fh ) -{ - int returnVal; - HDFsetInfo dataPtr; - int dataLen; - - if ( OUTPUT_SWITCH != MPI_SUMMARY_TRACE ) - { - returnVal = PabloMPI_File_sync ( fh ); - } - else - { - dataLen = 1; - dataPtr.setID = (long)fh; - HDFtraceEvent_RT( HDFmpiSyncID, - &dataPtr,dataLen ); - returnVal = MPI_File_sync ( fh ); - HDFtraceEvent_RT( -HDFmpiSyncID, - &dataPtr,dataLen ); - } - return returnVal; -} - -int -HDF_get_Bytes( MPI_Datatype datatype, int count ) -{ - int nm_bytes; - - MPI_Type_size( datatype, &nm_bytes ); - return( nm_bytes * count ); -} - -int -PabloMPI_File_open( MPI_Comm comm, - char *filename, - int amode, - MPI_Info info, - MPI_File *fh ) -{ - int returnVal; - - struct mpiOpenBeginArgs mpiOpenBeginArguments; - struct mpiOpenEndArgs mpiOpenEndArguments; - -#ifdef PABLODEBUG - fprintf( debugFile, "PabloMPI_File_open\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - - MPI_Comm_rank( comm, &HDFlocalNode ); - MPI_Comm_rank( MPI_COMM_WORLD, &HDFmyNode ); - - mpiOpenBeginArguments.localNode = HDF_get_source( HDFlocalNode ); - mpiOpenBeginArguments.globalNode = HDFmyNode; - mpiOpenBeginArguments.communicatorID = HDF_get_comm( comm ); - mpiOpenBeginArguments.mode = amode; - strcpy( mpiOpenBeginArguments.fileName, filename ); - - /* Generate entry record */ - HDFtraceIOEvent( mpiOpenBeginID, - (char *) &mpiOpenBeginArguments, - sizeof( mpiOpenBeginArguments ) ); - - returnVal = MPI_File_open( comm, filename, amode, info, fh ); - - mpiOpenEndArguments.localNode = HDF_get_source( HDFlocalNode ); - mpiOpenEndArguments.globalNode = HDFmyNode; - /* the fileID is mapped to the fp's address */ - myHDFid++; - mpiOpenEndArguments.fileID = myHDFid; - - /* Generate exit record */ - HDFtraceIOEvent( mpiOpenEndID, - (char *) &mpiOpenEndArguments, - sizeof( mpiOpenEndArguments ) ); - - return returnVal; -} - -int -PabloMPI_File_close( MPI_File *fh ) -{ - int returnVal; - - struct mpiCloseBeginArgs mpiCloseBeginArguments; - struct mpiCloseEndArgs mpiCloseEndArguments; - -#ifdef PABLODEBUG - fprintf( debugFile, "MPI_File_close\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - - mpiCloseBeginArguments.localNode = HDFlocalNode; - mpiCloseBeginArguments.globalNode = HDFmyNode; - mpiCloseBeginArguments.fileID = myHDFid; - - /* Generate entry record */ - HDFtraceIOEvent( mpiCloseBeginID, - (char *) &mpiCloseBeginArguments, - sizeof( mpiCloseBeginArguments ) ); - - returnVal = MPI_File_close( fh ); - - mpiCloseEndArguments.localNode = HDFlocalNode; - mpiCloseEndArguments.globalNode = HDFmyNode; - mpiCloseEndArguments.fileID = myHDFid; - - /* Generate exit record */ - HDFtraceIOEvent( mpiCloseEndID, - (char *) &mpiCloseEndArguments, - sizeof( mpiCloseEndArguments ) ); - - return returnVal; -} - -int -PabloMPI_File_set_size( MPI_File fh, MPI_Offset size ) -{ - int returnVal; - - struct mpiSetSizeBeginArgs mpiSetSizeBeginArguments; - struct mpiSetSizeEndArgs mpiSetSizeEndArguments; - -#ifdef PABLODEBUG - fprintf( debugFile, "MPI_File_set_size\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - - mpiSetSizeBeginArguments.localNode = HDFlocalNode; - mpiSetSizeBeginArguments.globalNode = HDFmyNode; - /* mpiSetSizeBeginArguments.fileID = (long) (&fh); */ - mpiSetSizeBeginArguments.fileID = myHDFid; - - mpiSetSizeBeginArguments.fileSize = (long) size; - - /* Generate entry record */ - HDFtraceIOEvent( mpiSetSizeBeginID, - (char *) &mpiSetSizeBeginArguments, - sizeof( mpiSetSizeBeginArguments ) ); - - returnVal = MPI_File_set_size( fh, size ); - - mpiSetSizeEndArguments.localNode = HDFlocalNode; - mpiSetSizeEndArguments.globalNode = HDFmyNode; - mpiSetSizeEndArguments.fileID = myHDFid; - - /* Generate entry record */ - HDFtraceIOEvent( mpiSetSizeEndID, - (char *) &mpiSetSizeEndArguments, - sizeof( mpiSetSizeEndArguments ) ); - - return returnVal; -} - -int -PabloMPI_File_get_size( MPI_File fh, MPI_Offset *size ) -{ - int returnVal; - - struct mpiGetSizeBeginArgs mpiGetSizeBeginArguments; - struct mpiGetSizeEndArgs mpiGetSizeEndArguments; - -#ifdef PABLODEBUG - fprintf( debugFile, "MPI_File_get_size\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - - mpiGetSizeBeginArguments.localNode = HDFlocalNode; - mpiGetSizeBeginArguments.globalNode = HDFmyNode; - /* mpiGetSizeBeginArguments.fileID = (long) (&fh); */ - mpiGetSizeBeginArguments.fileID = myHDFid; - - /* Generate entry record */ - HDFtraceIOEvent( mpiGetSizeBeginID, - (char *) &mpiGetSizeBeginArguments, - sizeof( mpiGetSizeBeginArguments ) ); - - returnVal = MPI_File_get_size( fh, size); - - mpiGetSizeEndArguments.localNode = HDFlocalNode; - mpiGetSizeEndArguments.globalNode = HDFmyNode; - /* mpiGetSizeEndArguments.fileID = (long) ( &fh ); */ - mpiGetSizeEndArguments.fileID = myHDFid; - - mpiGetSizeEndArguments.fileSize = (long) (*size); - - /* Generate entry record */ - HDFtraceIOEvent( mpiGetSizeEndID, - (char *) &mpiGetSizeEndArguments, - sizeof( mpiGetSizeEndArguments ) ); - - return returnVal; -} - -int -PabloMPI_File_set_view( MPI_File fh, - MPI_Offset disp, - MPI_Datatype etype, - MPI_Datatype filetype, - char *datarep, - MPI_Info info ) -{ - int returnVal; - - struct mpiSetViewBeginArgs mpiSetViewBeginArguments; - struct mpiSetViewEndArgs mpiSetViewEndArguments; - -#ifdef PABLODEBUG - fprintf( debugFile, "MPI_File_set_view\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - - mpiSetViewBeginArguments.localNode = HDFlocalNode; - mpiSetViewBeginArguments.globalNode = HDFmyNode; - /* mpiSetViewBeginArguments.fileID = (long) ( &fh ); */ - mpiSetViewBeginArguments.fileID = myHDFid; - - mpiSetViewBeginArguments.disp = (long) ( disp ); - mpiSetViewBeginArguments.etype = HDF_get_Datatype( etype ); - mpiSetViewBeginArguments.fileType = HDF_get_Datatype( filetype ); - mpiSetViewBeginArguments.dataRep = HDF_get_DataRep( datarep ); - - /* Generate entry record */ - HDFtraceIOEvent( mpiSetViewBeginID, - (char *) &mpiSetViewBeginArguments, - sizeof( mpiSetViewBeginArguments ) ); - - returnVal = MPI_File_set_view( fh, - disp, - etype, - filetype, - datarep, - info ); - - mpiSetViewEndArguments.localNode = HDFlocalNode; - mpiSetViewEndArguments.globalNode = HDFmyNode; - /* mpiSetViewEndArguments.fileID = (long) ( &fh ); */ - mpiSetViewEndArguments.fileID = myHDFid; - - /* Generate entry record */ - HDFtraceIOEvent( mpiSetViewEndID, - (char *) &mpiSetViewEndArguments, - sizeof( mpiSetViewEndArguments ) ); - - return returnVal; -} - -int -PabloMPI_File_get_view( MPI_File fh, - MPI_Offset *disp, - MPI_Datatype *etype, - MPI_Datatype *filetype, - char *datarep ) -{ - int returnVal; - - struct mpiGetViewBeginArgs mpiGetViewBeginArguments; - struct mpiGetViewEndArgs mpiGetViewEndArguments; - -#ifdef PABLODEBUG - fprintf( debugFile, "MPI_File_get_view\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - - mpiGetViewBeginArguments.localNode = HDFlocalNode; - mpiGetViewBeginArguments.globalNode = HDFmyNode; - mpiGetViewBeginArguments.fileID = myHDFid; - - /* Generate entry record */ - HDFtraceIOEvent( mpiGetViewBeginID, - (char *) &mpiGetViewBeginArguments, - sizeof( mpiGetViewBeginArguments ) ); - - returnVal = MPI_File_get_view( fh, disp, etype, filetype, datarep ); - - mpiGetViewEndArguments.localNode = HDFlocalNode; - mpiGetViewEndArguments.globalNode = HDFmyNode; - /* mpiGetViewEndArguments.fileID = (long) ( &fh ); */ - mpiGetViewEndArguments.fileID = myHDFid; - - mpiGetViewEndArguments.disp = (long) ( *disp ); - mpiGetViewEndArguments.etype = HDF_get_Datatype( *etype ); - mpiGetViewEndArguments.fileType = HDF_get_Datatype( *filetype ); - mpiGetViewEndArguments.dataRep = HDF_get_DataRep( datarep ); - - /* Generate entry record */ - HDFtraceIOEvent( mpiGetViewEndID, - (char *) &mpiGetViewEndArguments, - sizeof( mpiGetViewEndArguments ) ); - - return returnVal; -} - -int -PabloMPI_File_read_at( MPI_File fh, - MPI_Offset offset, - void *buf, - int count, - MPI_Datatype datatype, - MPI_Status *status ) -{ - int returnVal, bcount; - - struct mpiReadAtBeginArgs mpiReadAtBeginArguments; - struct mpiReadAtEndArgs mpiReadAtEndArguments; - -#ifdef PABLODEBUG - fprintf( debugFile, "MPI_File_read_at\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - - mpiReadAtBeginArguments.localNode = HDFlocalNode; - mpiReadAtBeginArguments.globalNode = HDFmyNode; - /* mpiReadAtBeginArguments.fileID = (long) ( &fh ); */ - mpiReadAtBeginArguments.fileID = myHDFid; - - mpiReadAtBeginArguments.offset = (long) ( offset ); - mpiReadAtBeginArguments.count = count; - mpiReadAtBeginArguments.dataType = HDF_get_Datatype( datatype ); - mpiReadAtBeginArguments.numBytes = HDF_get_Bytes( datatype, count ); - - - /* Generate entry record */ - HDFtraceIOEvent( mpiReadAtBeginID, - (char *) &mpiReadAtBeginArguments, - sizeof( mpiReadAtBeginArguments ) ); - - returnVal = MPI_File_read_at( fh, offset, buf, count, datatype, status ); - - mpiReadAtEndArguments.localNode = HDFlocalNode; - mpiReadAtEndArguments.globalNode = HDFmyNode; - /* mpiReadAtEndArguments.fileID = (long) ( &fh ); */ - mpiReadAtEndArguments.fileID = myHDFid; - - MPI_Get_count( status, datatype, &bcount ); - if ( bcount < 0 || bcount > count ) - { - mpiReadAtEndArguments.rCount = -1; - mpiReadAtEndArguments.numBytes = -1; - } - else - { - mpiReadAtEndArguments.rCount = bcount; - mpiReadAtEndArguments.numBytes = HDF_get_Bytes( datatype, bcount ); - } - /* Generate entry record */ - HDFtraceIOEvent( mpiReadAtEndID, - (char *) &mpiReadAtEndArguments, - sizeof( mpiReadAtEndArguments ) ); - - return returnVal; -} - -int -PabloMPI_File_read_at_all( MPI_File fh, - MPI_Offset offset, - void *buf, - int count, - MPI_Datatype datatype, - MPI_Status *status ) -{ - int returnVal, bcount; - - struct mpiReadAtAllBeginArgs mpiReadAtAllBeginArguments; - struct mpiReadAtAllEndArgs mpiReadAtAllEndArguments; - -#ifdef PABLODEBUG - fprintf( debugFile, "MPI_File_read_at_all\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - - mpiReadAtAllBeginArguments.localNode = HDFlocalNode; - mpiReadAtAllBeginArguments.globalNode = HDFmyNode; - /* mpiReadAtAllBeginArguments.fileID = (long) ( &fh ); */ - mpiReadAtAllBeginArguments.fileID = myHDFid; - - mpiReadAtAllBeginArguments.offset = (long) ( offset ); - mpiReadAtAllBeginArguments.count = count; - mpiReadAtAllBeginArguments.dataType = HDF_get_Datatype( datatype ); - mpiReadAtAllBeginArguments.numBytes = HDF_get_Bytes( datatype, count ); - - /* Generate entry record */ - HDFtraceIOEvent( mpiReadAtAllBeginID, - (char *) &mpiReadAtAllBeginArguments, - sizeof( mpiReadAtAllBeginArguments ) ); - - returnVal = MPI_File_read_at_all( fh, - offset, - buf, - count, - datatype, - status ); - - mpiReadAtAllEndArguments.localNode = HDFlocalNode; - mpiReadAtAllEndArguments.globalNode = HDFmyNode; - /* mpiReadAtAllEndArguments.fileID = (long) ( &fh ); */ - mpiReadAtAllEndArguments.fileID = myHDFid; - - MPI_Get_count( status, datatype, &bcount ); - if ( bcount < 0 || bcount > count ) - { - mpiReadAtAllEndArguments.rCount = -1; - mpiReadAtAllEndArguments.numBytes = -1; - } - else - { - mpiReadAtAllEndArguments.rCount = bcount; - mpiReadAtAllEndArguments.numBytes = HDF_get_Bytes( datatype, bcount ); - } - - /* Generate entry record */ - HDFtraceIOEvent( mpiReadAtAllEndID, - (char *) &mpiReadAtAllEndArguments, - sizeof( mpiReadAtAllEndArguments ) ); - - return returnVal; -} - -int -PabloMPI_File_write_at( MPI_File fh, - MPI_Offset offset, - void *buf, - int count, - MPI_Datatype datatype, - MPI_Status *status ) -{ - int returnVal, bcount; - - struct mpiWriteAtBeginArgs mpiWriteAtBeginArguments; - struct mpiWriteAtEndArgs mpiWriteAtEndArguments; - -#ifdef PABLODEBUG - fprintf( debugFile, "MPI_File_write_at\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - - mpiWriteAtBeginArguments.localNode = HDFlocalNode; - mpiWriteAtBeginArguments.globalNode = HDFmyNode; - /* mpiWriteAtBeginArguments.fileID = (long) ( &fh ); */ - mpiWriteAtBeginArguments.fileID = myHDFid; - - mpiWriteAtBeginArguments.offset = (long) ( offset ); - mpiWriteAtBeginArguments.count = count; - mpiWriteAtBeginArguments.dataType = HDF_get_Datatype( datatype ); - mpiWriteAtBeginArguments.numBytes = HDF_get_Bytes( datatype, count ); - - /* Generate entry record */ - HDFtraceIOEvent( mpiWriteAtBeginID, - (char *) &mpiWriteAtBeginArguments, - sizeof( mpiWriteAtBeginArguments ) ); - - returnVal = MPI_File_write_at( fh, - offset, - buf, - count, - datatype, - status ); - - mpiWriteAtEndArguments.localNode = HDFlocalNode; - mpiWriteAtEndArguments.globalNode = HDFmyNode; - /* mpiWriteAtEndArguments.fileID = (long) ( &fh ); */ - mpiWriteAtEndArguments.fileID = myHDFid; - - MPI_Get_count( status, datatype, &bcount ); - mpiWriteAtEndArguments.wCount = bcount; - mpiWriteAtEndArguments.numBytes = HDF_get_Bytes( datatype, bcount ); - - /* Generate entry record */ - HDFtraceIOEvent( mpiWriteAtEndID, - (char *) &mpiWriteAtEndArguments, - sizeof( mpiWriteAtEndArguments ) ); - - return returnVal; -} - -int -PabloMPI_File_write_at_all( MPI_File fh, - MPI_Offset offset, - void *buf, - int count, - MPI_Datatype datatype, - MPI_Status *status ) -{ - int returnVal, bcount; - int numBytes; - - struct mpiWriteAtAllBeginArgs mpiWriteAtAllBeginArguments; - struct mpiWriteAtAllEndArgs mpiWriteAtAllEndArguments; - -#ifdef PABLODEBUG - fprintf( debugFile, "MPI_File_write_at\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - - mpiWriteAtAllBeginArguments.localNode = HDFlocalNode; - mpiWriteAtAllBeginArguments.globalNode = HDFmyNode; - /* mpiWriteAtAllBeginArguments.fileID = (long) ( &fh ); */ - mpiWriteAtAllBeginArguments.fileID = myHDFid; - - mpiWriteAtAllBeginArguments.offset = (long) ( offset ); - mpiWriteAtAllBeginArguments.count = count; - mpiWriteAtAllBeginArguments.dataType = HDF_get_Datatype( datatype ); - mpiWriteAtAllBeginArguments.numBytes = HDF_get_Bytes( datatype, count ); - - /* Generate entry record */ - HDFtraceIOEvent( mpiWriteAtAllBeginID, - (char *) &mpiWriteAtAllBeginArguments, - sizeof( mpiWriteAtAllBeginArguments ) ); - - returnVal = MPI_File_write_at_all( fh, - offset, - buf, - count, - datatype, - status ); - - mpiWriteAtAllEndArguments.localNode = HDFlocalNode; - mpiWriteAtAllEndArguments.globalNode = HDFmyNode; - mpiWriteAtAllEndArguments.fileID = myHDFid; - - if ( returnVal == MPI_SUCCESS ) - { - bcount = count; - numBytes = HDF_get_Bytes( datatype, count ); - } - else - { - bcount = -1; - numBytes = -1; - } - mpiWriteAtAllEndArguments.wCount = bcount; - mpiWriteAtAllEndArguments.numBytes = numBytes; - - /* Generate entry record */ - HDFtraceIOEvent( mpiWriteAtAllEndID, - (char *) &mpiWriteAtAllEndArguments, - sizeof( mpiWriteAtAllEndArguments ) ); - - return returnVal; -} - -int -PabloMPI_File_sync( MPI_File fh ) -{ - int returnVal; - - struct mpiSyncBeginArgs mpiSyncBeginArguments; - struct mpiSyncEndArgs mpiSyncEndArguments; - -#ifdef PABLODEBUG - fprintf( debugFile, "MPI_File_sync\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - - mpiSyncBeginArguments.localNode = HDFlocalNode; - mpiSyncBeginArguments.globalNode = HDFmyNode; - /* mpiSyncBeginArguments.fileID = (long) ( &fh ); */ - mpiSyncBeginArguments.fileID = myHDFid; - - /* Generate entry record */ - HDFtraceIOEvent( mpiSyncBeginID, - (char *) &mpiSyncBeginArguments, - sizeof( mpiSyncBeginArguments ) ); - - returnVal = MPI_File_sync ( fh ); - - mpiSyncEndArguments.localNode = HDFlocalNode; - mpiSyncEndArguments.globalNode = HDFmyNode; - /* mpiSyncEndArguments.fileID = (long) ( &fh ); */ - mpiSyncEndArguments.fileID = myHDFid; - - /* Generate entry record */ - HDFtraceIOEvent( mpiSyncEndID, - (char *) &mpiSyncEndArguments, - sizeof( mpiSyncEndArguments ) ); - - return returnVal; -} -#endif /* _BUILD */ -#else /* H5_HAVE_PARALLEL */ -void HDF_get_NodeNum( int* nodeNum ) -{ - *nodeNum = 0; -} -#endif /* H5_HAVE_PARALLEL */ diff --git a/pablo/PabloHDF_RT.c b/pablo/PabloHDF_RT.c deleted file mode 100644 index c71f6e8..0000000 --- a/pablo/PabloHDF_RT.c +++ /dev/null @@ -1,1686 +0,0 @@ -/* This file is part of the Pablo Performance Analysis Environment -// -// (R) -// The Pablo Performance Analysis Environment software is NOT in -// the public domain. However, it is freely available without fee for -// education, research, and non-profit purposes. By obtaining copies -// of this and other files that comprise the Pablo Performance Analysis -// Environment, you, the Licensee, agree to abide by the following -// conditions and understandings with respect to the copyrighted software: -// -// 1. The software is copyrighted in the name of the Board of Trustees -// of the University of Illinois (UI), and ownership of the software -// remains with the UI. -// -// 2. Permission to use, copy, and modify this software and its documentation -// for education, research, and non-profit purposes is hereby granted -// to Licensee, provided that the copyright notice, the original author's -// names and unit identification, and this permission notice appear on -// all such copies, and that no charge be made for such copies. Any -// entity desiring permission to incorporate this software into commercial -// products should contact: -// -// Professor Daniel A. Reed reed@cs.uiuc.edu -// University of Illinois -// Department of Computer Science -// 2413 Digital Computer Laboratory -// 1304 West Springfield Avenue -// Urbana, Illinois 61801 -// USA -// -// 3. Licensee may not use the name, logo, or any other symbol of the UI -// nor the names of any of its employees nor any adaptation thereof in -// advertizing or publicity pertaining to the software without specific -// prior written approval of the UI. -// -// 4. THE UI MAKES NO REPRESENTATIONS ABOUT THE SUITABILITY OF THE -// SOFTWARE FOR ANY PURPOSE. IT IS PROVIDED "AS IS" WITHOUT EXPRESS -// OR IMPLIED WARRANTY. -// -// 5. The UI shall not be liable for any damages suffered by Licensee from -// the use of this software. -// -// 6. The software was developed under agreements between the UI and the -// Federal Government which entitle the Government to certain rights. -// -// ************************************************************************* -// -// Developed by: The Pablo Research Group -// University of Illinois at Urbana-Champaign -// Department of Computer Science -// 1304 W. Springfield Avenue -// Urbana, IL 61801 -// -// http://www-pablo.cs.uiuc.edu -// -// Send comments to: pablo-feedback@guitar.cs.uiuc.edu -// -// Copyright (c) 1987-1998 -// The University of Illinois Board of Trustees. -// All Rights Reserved. -// -// PABLO is a registered trademark of -// The Board of Trustees of the University of Illinois -// registered in the U.S. Patent and Trademark Office. -// -// Project Manager and Principal Investigator: -// Daniel A. Reed (reed@cs.uiuc.edu) -// -// Funded in part by the Defense Advanced Research Projects Agency -// under DARPA contracts DABT63-94-C0049 (SIO Initiative), -// F30602-96-C-0161, and DABT63-96-C-0027 by the National Science -// Foundation under the PACI program and grants NSF CDA 94-01124 and -// ASC 97-20202, and by the Department of Energy under contracts -// DOE B-341494, W-7405-ENG-48, and 1-B-333164. -*/ -/*======================================================================* -// File: PabloHDF_RT * -// Purpose: support use of Pablo trace library to analyze HDF * -// performance * -// Contents: * -// HDFinitTrace_RT : initialize real-time tracing * -// HDFendTrace_RT : complete trace * -// initHDFProcTrace_RT : sets up data structures at init time. * -// initproctracert_() : fortran interface * -// HDFtraceEvent_RT : called to record event information * -// HDFrecordSum : adds fields of one record to those of * -// another * -// HDFnodeInit : initializes linked list node * -// HDFrecordFileName : records named HDF identifiers * -// BeginIOEventRecord : initialize before I/O call * -// EndIOEventRecord : finalize after I/O call * -// BeginMPIOEventRecord : initialize before MPI-I/O call * -// EndMPIOEventRecord : finalize after MPI-I/O call * -// BeginHDFEventRecord : initialize before HDF call * -// EndHDFEventRecord : finalizie after HDF call * -// HDFrecordFileName : record named identifier information * -// HDFassignPabloIDs : assigns a number to named identifiers * -// writeHDFNamePacketsRT : write SDDF packets for identifier names * -// HDFupdateProcLists : adds records in queue to entries in * -// tables * -// HDFupdateProcs : called by HDFupdateProcLists to do * -// addition * -// HDFSummarySDDF : write SDDF event summary packets * -// HDFnodeInit : initialize event node * -// HDFrecordSum : add one event record to another * -// getHDFFieldIndex : get Field Index for counts and times * -// getHDFByteFieldIndex : get field index for bytes * -// writeHDFRecDescrptrsRT : write HDF Record Descriptor packets * -// printFileMappingsRT : print map of named identifiers * -// _hdfNameDescriptor() : writes SDDF descriptor packet for names * -//======================================================================*/ -#ifndef PCF_BUILD -#ifdef _HDF5_ -#include "H5config.h" -#endif -#include "SystemDepend.h" -#include "Trace.h" -#include "TraceParam.h" -#include "ProcIDs.h" -#include "IO_TraceParams.h" -#include "IOTrace.h" -#include "HDFTrace.h" -#include "SDDFparam.h" -#include <string.h> -#include <stdio.h> -#include <stdlib.h> -#include <fcntl.h> -/*======================================================================* -// on ipsc/860 don't include this or you'll get multiply defined SEEK_ * -//======================================================================*/ -#ifndef __NX -#include <unistd.h> -#endif - -#ifndef SUCCESS -#define SUCCESS 0 -#define FAILURE 1 -#endif - -#ifndef TRUE -#define TRUE 1 -#define FALSE 0 -#endif -#define NEG_THREAD_ID -999 - -#include "HDFrecord_RT.h" - -#ifdef H5_HAVE_MPIOTRACE -#include "mpi.h" -#include "MPIO_EventArgs.h" -#endif - -#ifndef TRgetThreadID -#define TRgetThreadID TRgetNode -#endif - -#ifndef TRnumNodes -#define TRnumNodes 1 -#endif - -#define AllThreads -1 - -/*======================================================================* -// User output file pointer. * -//======================================================================*/ -FILE *outP; -/*======================================================================* -// Data Structures: * -// * -// HDFQueues: an array of linked list. Each list corresponds to an * -// HDF event and contains an entry for each different * -// thread and data set referenced by a call to that event * -// * -// CallStack: a stack of HDFnode_t objects. At any given time, the * -// stack represents the calling stack of the HDF routines * -// * -// HDFfileList: a linked list of named identifiers and identifier * -// numbers. This is processed later to assign a single * -// numbers to identifiers with the same name. * -//======================================================================*/ -HDFnode_t **HDFQueues; -HDFnode_t *CallStack; -HDFnode_t *TagQueue; -fileRec_t *HDFfileList; -/*======================================================================* -// Internal Function prototypes * -//======================================================================*/ -void HDFinitTrace_RT( char *, int, int ); -void HDFendTrace_RT(); -int initproctracert_( void ); -int initHDFProcTrace_RT( void ); -void HDFtraceEvent_RT( int , char *, unsigned ) ; -void BeginIOEventRecord ( int, CLOCK , void * ); -void EndIOEventRecord ( int , CLOCK , void * ); -void BeginMPIOEventRecord ( int, CLOCK , void *, int ); -void EndMPIOEventRecord ( int , CLOCK , void *, int); -void BeginHDFEventRecord( int , CLOCK ); -void EndHDFEventRecord ( CLOCK ,void *); -void HDFrecordFileName( HDFsetInfo * ); -void HDFassignPabloIDs( int *, char *** ); -void writeHDFNamePacketsRT( char **, int ); -void HDFupdateProcLists( void ); -void HDFupdateProcs( HDFnode_t * ); -void HDFSummarySDDF( HDFnode_t *, int ); -void HDFnodeInit ( HDFnode_t * ) ; -void HDFrecordSum ( HDFrec_t *, HDFrec_t * ); -int getHDFFieldIndex( int ); -int getHDFByteFieldIndex( int ); -void writeHDFRecDescrptrsRT( void ); -void printFileMappingsRT( char *, char **, int ); -void _hdfNameDescriptor( void ); -void _hdfDescriptorRT( char *, char *, int ); -void HDFfinalTimeStamp( void ); -void getHDFprocName( int index, char buff[41] ); -void IOtraceInit( char*, int, int ); -/*======================================================================* -// Global variables * -//======================================================================*/ -HDFnode_t InitNode; /* Node used in initialization */ -HDFrec_t Tally; /* Node used to get total */ -char *FileName; /* Name of Trace file */ -HDFsetInfo openInfo; /* Info about file opened */ -char openName[256]; /* Name of opened file */ -extern char *hdfRecordPointer; -extern char HDFprocNames[][40]; -/*======================================================================* -// NAME * -// HDFinitTrace_RT-- initialize HDF real-time tracing * -// USAGE * -// VOID HDFinitTrace_RT( fileName ) * -// * -// char *fileName; IN: name of output file * -// RETURNS * -// None. * -//======================================================================*/ -void HDFinitTrace_RT( char *fileName, int procNum, int OUTSW ) -{ - int error; - TRgetClock( &epoch ); - error = initHDFProcTrace_RT() ; - if ( error != SUCCESS ) - { - fprintf (stderr,"Unable to Initialize properly. Exiting program\n"); - exit(-1); - } - FileName = ( char * ) malloc ( strlen( fileName ) + 10 ); - /*===================================================================* - // Here the library was built to linked with the MPI and MPIO * - // libraries. However, the use may chose not to run with MPI. * - // A check is made to see if MPI has been initialized. If so, * - // a trace file is assigned to the current node with the number * - // of the node as a suffix; if not, only one file is opened * - // and it is not given a suffix. * - //===================================================================*/ - IOtraceInit( fileName, procNum, OUTSW ); -} -/*======================================================================* -// NAME * -// HDFendTrace-- end HDF tracing * -// USAGE * -// VOID HDFendTrace_RT(void) * -// RETURNS * -// None. * -//======================================================================*/ -void HDFendTrace_RT( ) -{ - int j, numSetIDs; - HDFnode_t *P; - char **Names; - - HDFfinalTimeStamp(); - /*===================================================================* - // Assing pablo ids to named identifiers and tag records * - //===================================================================*/ - HDFassignPabloIDs( &numSetIDs, &Names ); - /*===================================================================* - // Create a file name for the File map file. * - // Disable for now. * - //===================================================================*/ -/* mapFile = (char *)malloc( strlen(FileName) + 4 ); - strcpy(mapFile,FileName); - strcat(mapFile,".map"); */ - /*===================================================================* - // print the file mappings. * - //===================================================================*/ -/* printFileMappingsRT( mapFile, Names, numSetIDs ); */ - /*===================================================================* - // Print SDDF summary records * - //===================================================================*/ - writeHDFRecDescrptrsRT(); - writeHDFNamePacketsRT( Names, numSetIDs ); - for ( j = 0; j < NumHDFProcs; ++j ) { - HDFSummarySDDF( HDFQueues[j], j ); - } - endTracing(); -} -/*======================================================================* -// initHFDProcTrace_RT * -// This function initializes data structures specific to * -// the HDF real-time procedure entry/exit tracing extensions of * -// the Pablo instrumentation library. * -//======================================================================*/ -int initproctracert_( void ) - -{ - return initHDFProcTrace_RT(); -} - -int initHDFProcTrace_RT( void ) -{ - int i; - int j; - int size; - int numProcs = NumHDFProcs; - - if ( traceProcessorNumber == -1 ) - { - traceProcessorNumber = TRgetDefaultProcessor(); - } - /*===================================================================* - // Initialize InitNode used for node initialization. * - //===================================================================*/ - InitNode.ptr = NULL; - InitNode.eventID = 0; - InitNode.lastIOtime = zeroClock; - InitNode.record.nCalls = 0; - InitNode.record.lastCall = zeroClock; - InitNode.record.incDur = zeroClock; - InitNode.record.excDur = zeroClock; - InitNode.record.hdfID = 0; - InitNode.record.xRef = 0; - for ( j = 0; j < nTallyFields; ++j ) - { - InitNode.record.times[j] = zeroClock; - } - for ( j = 0; j < nTallyFields; ++j ) - { - InitNode.record.counts[j] = 0; - } - for ( j = 0; j < nByteFields; ++j ) - { - InitNode.record.bytes[j] = 0; - } - for ( i = 0; i < nByteFields; ++i ) - { - for ( j = 0; j < nBkts; ++j ) - { - InitNode.record.Hists[i][j] = 0; - } - } - /*===================================================================* - // initialize linked list used to keep track of named hdf * - // identifiers. * - //===================================================================*/ - HDFfileList = NULL; - /*===================================================================* - // Allocate a one dimensional array of pointers to queues of * - // HDFnodes. There is one queue for each thread and one for * - // each HDF procedure. Each queue will be a list of summary * - // records distinquished by file type and * - //===================================================================*/ - size = (int)(numProcs*sizeof( HDFnode_t * )); - HDFQueues = (HDFnode_t **)malloc( size ); - if ( HDFQueues == NULL ) - { - fprintf(stderr,"Failed to allocate HDFQueues in initHDFProcTrace\n"); - return FAILURE; - } - for ( j = 0; j < numProcs; ++j ) - { - HDFQueues[j] = NULL; - } - /*===================================================================* - // Initialize call stack to a dummy node and TagQueue to NULL * - //===================================================================*/ - CallStack = (HDFnode_t *)malloc( sizeof(HDFnode_t) ); - *CallStack = InitNode; - TagQueue = NULL ; - return SUCCESS; -} -/*======================================================================* -// This is called from the HDF and I/O routines when real-time summary * -// tracing is used. It sets up a call stack for the specific thread in * -// use if no stack is yet set up. It then calls calls a routine to * -// handle the event based on whether it is an I/O or HDF call. * -//======================================================================*/ -void HDFtraceEvent_RT( int eventType, char *dataPtr, unsigned dataLen ) -{ - CLOCK seconds; - - seconds = getClock(); - - if ( isBeginIOEvent ( eventType ) || eventType == ID_malloc ) - { - BeginIOEventRecord ( eventType, seconds, dataPtr ) ; - } - else if ( isEndIOEvent( eventType ) || eventType == -ID_malloc) - { - EndIOEventRecord ( eventType, seconds, dataPtr ); - } - else if ( isBeginHDFEvent( eventType ) ) - { - BeginHDFEventRecord ( eventType , seconds ) ; - } - else if ( isEndHDFEvent( eventType ) ) - { - EndHDFEventRecord ( seconds, dataPtr ); -#ifdef H5_HAVE_MPIOTRACE - } - else if ( isBeginMPIOEvent( eventType ) ) - { - BeginMPIOEventRecord ( eventType, seconds, dataPtr, dataLen ) ; - } - else if ( isEndMPIOEvent( eventType ) ) - { - EndMPIOEventRecord ( eventType, seconds, dataPtr, dataLen ); -#endif /* H5_HAVE_MPIOTRACE */ - } - else - { - fprintf(stderr,"eventType %d, dataLen = %u\n",eventType,dataLen); - } -} -/*======================================================================* -// BeginIOEventRecord: * -// This routine simply records the time in the record on the top of * -// the stack. * -//======================================================================*/ -void BeginIOEventRecord ( int eventType, CLOCK seconds, void *dataPtr ) -{ - char *name; - /*===================================================================* - // save the time value temporarily in top of stack * - // When the end record is received, the duration can be computed. * - //===================================================================*/ - CallStack->lastIOtime = seconds; - /*===================================================================* - // get the ID or name of the file accessed from the structure * - // passed as dataPtr. * - //===================================================================*/ - switch ( eventType ) - { - case fopenBeginID: - case openBeginID: - { - name = (char *)(dataPtr) + 2*sizeof(int); - strcpy( openName, name ); - break; - } - case fcloseBeginID: - case closeBeginID: - { - CallStack->record.hdfID = *( long *)dataPtr; - break; - } - case readBeginID: - case freadBeginID: - case writeBeginID: - case fwriteBeginID: - case lseekBeginID: - case fseekBeginID: - case fsetposBeginID: - case rewindBeginID: - { - CallStack->record.hdfID = *(int *)dataPtr; - break; - } - default: - { - break; - } - } -} -/*======================================================================* -// EndIOEventRecord: * -// This routine retrieves the entry time saved on the top of the stack * -// and computes the duration of the I/O event. This is added to the * -// record field corresponding to this type of I/O. The Bytes field in * -// the record is updated if this is a read or write operation. * -//======================================================================*/ -void EndIOEventRecord ( int eventType, CLOCK secs, void *dataPtr ) -{ - CLOCK incDur; - int i, Field, ByteField, bytes; - - incDur = clockSubtract(secs,CallStack->lastIOtime) ; - Field = getHDFFieldIndex( eventType ) ; - CallStack->record.times[Field] - = clockAdd ( CallStack->record.times[Field] , incDur ) ; - ++CallStack->record.counts[Field]; - ByteField = getHDFByteFieldIndex( Field ) ; - switch ( eventType ) - { - case readEndID: - case freadEndID: - case writeEndID: - case fwriteEndID: - case -ID_malloc: - { - bytes = *((int *)dataPtr); - CallStack->record.bytes[ByteField] += bytes; - /*====================================================== - // update histogram * - //=====================================================*/ - i = -1; - while ( bytes >= BktLim[i+1] ) ++i ; - if ( i >= 0 ) ++CallStack->record.Hists[ByteField][i]; - break; - } - case fopenEndID: - case openEndID: - { - openInfo.setName = openName; - openInfo.setID = (int)(*((long *)dataPtr)); - CallStack->record.hdfID = openInfo.setID; - HDFrecordFileName ( &openInfo ); - break; - } - default: - { - break; - } - } - -} -#ifdef H5_HAVE_MPIOTRACE -/*======================================================================* -// BeginMPIOEventRecord: * -// This routine simply records the time in the record on the top of * -// the stack. * -//======================================================================*/ -void BeginMPIOEventRecord( int eventType, - CLOCK seconds, - void *data, - int dataLen ) -{ - HDFsetInfo *dataPtr; - dataPtr = (HDFsetInfo *)data; - /*===================================================================* - // save the time value temporarily in top of stack * - // When the end record is received, the duration can be * - // computed. * - //===================================================================*/ - CallStack->lastIOtime = seconds; - /*===================================================================* - // get useful info from the structure pointed to by dataPtr. * - // Form most cases, this is the file ID. For mpiOpen, it is the * - // name of the file. For mpiDelete, no information is of any * - // use. * - //===================================================================*/ - if ( dataLen == 0 ) return; - CallStack->record.hdfID = dataPtr->setID; - switch ( eventType ) - { - case HDFmpiOpenID: - { - strcpy( openName, dataPtr->setName ); - break; - } - case HDFmpiReadAtID: - { - CallStack->record.bytes[MPIOreadBytesReq] += dataPtr->numBytes; - break; - } - case HDFmpiReadAtAllID: - { - CallStack->record.bytes[MPIOreadAllBytesReq] += dataPtr->numBytes; - break; - } - case HDFmpiWriteAtID: - { - CallStack->record.bytes[MPIOwriteBytesReq] += dataPtr->numBytes; - break; - } - case HDFmpiWriteAtAllID: - { - CallStack->record.bytes[MPIOwriteAllBytesReq] += dataPtr->numBytes; - break; - } - case HDFmpiIreadAtID: - { - CallStack->record.bytes[MPIOiReadBytesReq] += dataPtr->numBytes; - break; - } - case HDFmpiIwriteAtID: - { - CallStack->record.bytes[MPIOiWriteBytesReq] += dataPtr->numBytes; - break; - } - case HDFmpiReadID: - { - CallStack->record.bytes[MPIOreadBytesReq] += dataPtr->numBytes; - break; - } - case HDFmpiReadAllID: - { - CallStack->record.bytes[MPIOreadAllBytesReq] += dataPtr->numBytes; - break; - } - case HDFmpiWriteID: - { - CallStack->record.bytes[MPIOwriteBytesReq] += dataPtr->numBytes; - break; - } - case HDFmpiWriteAllID: - { - CallStack->record.bytes[MPIOwriteAllBytesReq] += dataPtr->numBytes; - break; - } - case HDFmpiIreadID: - { - CallStack->record.bytes[MPIOiReadBytesReq] += dataPtr->numBytes; - break; - } - case HDFmpiIwriteID: - { - CallStack->record.bytes[MPIOiWriteBytesReq] += dataPtr->numBytes; - break; - } - default: - { - break; - } - } -} -/*======================================================================* -// EndMPIOEventRecord: * -// This routine retrieves the entry time saved on the top of the stack * -// and computes the duration of the MPI-I/O event. This is added to * -// the record field corresponding MPI-I/O. * -//======================================================================*/ -void EndMPIOEventRecord ( int eventType, - CLOCK secs, - void *data, - int dataLen ) -{ - CLOCK incDur; - - HDFsetInfo* dataPtr; - incDur = clockSubtract(secs,CallStack->lastIOtime) ; - CallStack->record.times[MPI] - = clockAdd ( CallStack->record.times[MPI], incDur ); - ++CallStack->record.counts[MPI]; - if ( dataLen == 0 ) - { - return; - } - dataPtr = (HDFsetInfo *)data; - switch ( eventType ) - { - case -HDFmpiOpenID: - { - /*===========================================================* - // open and record the information. * - //===========================================================*/ - openInfo.setName = openName; - openInfo.setID = dataPtr->setID; - CallStack->record.hdfID = openInfo.setID; - HDFrecordFileName ( &openInfo ); - break; - } - case -HDFmpiReadAtID: - { - ++CallStack->record.counts[MPIOread] ; - CallStack->record.times[MPIOread] - = clockAdd ( CallStack->record.times[MPIOread], incDur ); - CallStack->record.bytes[MPIOreadBytesTrans] += dataPtr->numBytes; - break; - } - case -HDFmpiReadAtAllID: - { - ++CallStack->record.counts[MPIOreadAll] ; - CallStack->record.times[MPIOreadAll] - = clockAdd ( CallStack->record.times[MPIOreadAll], incDur ); - CallStack->record.bytes[MPIOreadAllBytesTrans] += dataPtr->numBytes; - break; - } - case -HDFmpiWriteAtID: - { - ++CallStack->record.counts[MPIOwrite] ; - CallStack->record.times[MPIOwrite] - = clockAdd ( CallStack->record.times[MPIOwrite], incDur ); - CallStack->record.bytes[MPIOwriteBytesTrans] += dataPtr->numBytes; - break; - } - case -HDFmpiWriteAtAllID: - { - ++CallStack->record.counts[MPIOwriteAll] ; - CallStack->record.times[MPIOwriteAll] - = clockAdd ( CallStack->record.times[MPIOwriteAll], incDur ); - CallStack->record.bytes[MPIOwriteAllBytesTrans] += dataPtr->numBytes; - break; - } - case -HDFmpiIreadAtID: - { - ++CallStack->record.counts[MPIOiRead] ; - CallStack->record.times[MPIOiRead] - = clockAdd ( CallStack->record.times[MPIOiRead], incDur ); - break; - } - case -HDFmpiIwriteAtID: - { - ++CallStack->record.counts[MPIOiWrite] ; - CallStack->record.times[MPIOiWrite] - = clockAdd ( CallStack->record.times[MPIOiWrite], incDur ); - break; - } - case -HDFmpiReadID: - { - ++CallStack->record.counts[MPIOread] ; - CallStack->record.times[MPIOread] - = clockAdd ( CallStack->record.times[MPIOread], incDur ); - CallStack->record.bytes[MPIOreadBytesTrans] += dataPtr->numBytes; - break; - } - case -HDFmpiReadAllID: - { - ++CallStack->record.counts[MPIOreadAll] ; - CallStack->record.times[MPIOreadAll] - = clockAdd ( CallStack->record.times[MPIOreadAll], incDur ); - CallStack->record.bytes[MPIOreadAllBytesTrans] += dataPtr->numBytes; - break; - } - case -HDFmpiWriteID: - { - ++CallStack->record.counts[MPIOwrite] ; - CallStack->record.times[MPIOwrite] - = clockAdd ( CallStack->record.times[MPIOwrite], incDur ); - CallStack->record.bytes[MPIOwriteBytesTrans] += dataPtr->numBytes; - break; - } - case -HDFmpiWriteAllID: - { - ++CallStack->record.counts[MPIOwriteAll] ; - CallStack->record.times[MPIOwriteAll] - = clockAdd ( CallStack->record.times[MPIOwriteAll], incDur ); - CallStack->record.bytes[MPIOwriteAllBytesTrans] += dataPtr->numBytes; - break; - } - case -HDFmpiIreadID: - { - ++CallStack->record.counts[MPIOiRead] ; - CallStack->record.times[MPIOiRead] - = clockAdd ( CallStack->record.times[MPIOiRead], incDur ); - break; - } - case -HDFmpiIwriteID: - { - ++CallStack->record.counts[MPIOiWrite] ; - CallStack->record.times[MPIOiWrite] - = clockAdd ( CallStack->record.times[MPIOiWrite], incDur ); - break; - } - default: - { - ++CallStack->record.counts[MPIOother] ; - CallStack->record.times[MPIOother] - = clockAdd ( CallStack->record.times[MPIOiWrite], incDur ); - break; - } - } -} -#endif /* H5_HAVE_MPIOTRACE */ -/*======================================================================* -// BeginHDFEventRecord: * -// This function puts a trace record on the stack corresponding to * -// this thread. If no stack exists, one is created. If no record * -// exist, a record is created. * -//======================================================================*/ -void BeginHDFEventRecord( int eventID, CLOCK secs ) -{ - HDFnode_t *HDFrec; - /*==============================================================* - // Create a record. Push it onto the call stack. * - //==============================================================*/ - HDFrec = (HDFnode_t *)malloc( sizeof(HDFnode_t) ); - HDFnodeInit( HDFrec ) ; - HDFrec->eventID = eventID; - HDFrec->ptr = CallStack; - CallStack = HDFrec ; - /*==============================================================* - // save time stamp in record. * - //==============================================================*/ - HDFrec->record.lastCall = secs; -} -/*======================================================================* -// EndHDFEventRecord: * -// This routine pops the HDF record from the top of the stack * -// corresponding to this thread and computes the inclusive duration * -// and adds it to the inclusive duration field of this record and to * -// the HDF time field of the calling routines record. * -//======================================================================*/ -void EndHDFEventRecord ( CLOCK secs, void *dataPtr ) -{ - HDFsetInfo *info; - HDFnode_t *HDFrec; - CLOCK incSecs; - static int dummyIDs = -4; - /*==============================================================* - // pop record from top of the stack, compute inclusive duration * - // and set the corresponding record field and increment nCalls. * - //==============================================================*/ - HDFrec = CallStack; - CallStack = CallStack->ptr; - if ( CallStack == NULL ) { - fprintf(stderr,">>> EndHDFEventRecord: Call Stack is empty. <<<\n"); - return; - } - incSecs = clockSubtract(secs,HDFrec->record.lastCall) ; - - HDFrec->record.incDur = incSecs; - ++HDFrec->record.nCalls; - /*==============================================================* - // add old record to chain to have its xRef field tagged. * - //==============================================================*/ - HDFrec->ptr = TagQueue; - TagQueue = HDFrec; - /*==============================================================* - // Add set ID information. * - //==============================================================*/ - if ( dataPtr != NULL ) { - info = (HDFsetInfo *)dataPtr; - if ( info->setName != NULL ) { - if ( info->setID == 0 ) { - info->setID = dummyIDs--; - } - HDFrecordFileName ( info ); - } - HDFrec->record.hdfID = info->setID; - } - /*==============================================================* - // Update the HDF totals for the calling program. * - //==============================================================*/ - CallStack->record.times[ HDF_ ] - = clockAdd( CallStack->record.times[ HDF_ ] , incSecs ) ; - ++CallStack->record.counts[ HDF_ ] ; - /*==============================================================* - // If the stack has only one record it represents the main * - // program. Tag all of the records on the TagQueue and tally * - // them up. * - //==============================================================*/ - if ( CallStack->ptr == NULL ) { - HDFupdateProcLists( ); - } -} -/*======================================================================* -// This routine keeps track of the identifier names and tags. Some * -// names may be associated with more than one tag. This will be * -// rectified when final tallies are done. * -//======================================================================*/ -void HDFrecordFileName( HDFsetInfo *info ) -{ - fileRec_t *P; - char *t; - int match; - long id; - P = HDFfileList; - match = FALSE; - id = info->setID; - while ( P != NULL && match == FALSE ) { - if ( strcmp( P->fileName, info->setName ) != 0 && P->hdfID == id ) { - match = TRUE; - } else { - P = P->ptr; - } - } - if ( match == FALSE ) { - P = ( fileRec_t *) malloc( sizeof( fileRec_t ) ); - P->ptr = HDFfileList; - HDFfileList = P; - t = (char *)malloc( strlen( info->setName ) + 1 ); - strcpy ( t, info->setName ) ; - P->fileName = t; - P->hdfID = info->setID; - P->PabloID = 0; - } -} -/*======================================================================* -// This routine assigns a unique Pablo ID to each unique name * -// regardless of the HDF tag. * -// It then goes through the HDFRecordQueue and marks each record with * -// the PabloID corresponding to the hdfID and xRef fields or 0. * -//======================================================================*/ -void HDFassignPabloIDs( int *nSetIDs, char ***Names ) -{ - fileRec_t *F, *G; - HDFnode_t *P; - int j; - long PabloID = 1; - long hdfID, xRef; - char *fName, **T; - - F = HDFfileList; - /*==============================================================* - // Assign the same ID to identical names. * - //==============================================================*/ - while ( F != NULL ) { - if ( F->PabloID == 0 ) { - F->PabloID = PabloID++; - fName = F->fileName; - G = F->ptr; - while ( G != NULL ) { - if ( strcmp( G->fileName , fName ) == 0 ) { - G->PabloID = F->PabloID; - } - G = G->ptr; - } - } - F = F->ptr; - } - *nSetIDs = (int)(PabloID - 1); - if ( *nSetIDs <= 0 ) return; - /*==============================================================* - // Repace hdfID and xRef fields with corresponding Pablo ID * - //==============================================================*/ - for ( j = 0; j < NumHDFProcs; ++j ) { - P = HDFQueues[j] ; - while ( P != NULL ) { - hdfID = P->record.hdfID; - if ( hdfID != 0 ) { - PabloID = 0; - F = HDFfileList; - while ( F != NULL && PabloID == 0 ) { - if ( hdfID == F->hdfID ) { - PabloID = F->PabloID; - } - F = F->ptr; - } - P->record.hdfID = PabloID; - } - xRef = P->record.xRef; - if ( xRef != 0 ) { - PabloID = 0; - F = HDFfileList; - while ( F != NULL && PabloID == 0 ) { - if ( xRef == F->hdfID ) { - PabloID = F->PabloID; - } - F = F->ptr; - } - P->record.xRef = PabloID; - } - P = P->ptr; - } /* end while ( P != NULL ) */ - } /* end for */ - /*==============================================================* - // get a list of all the unique names and order them according * - // to their Pablo IDs. * - //==============================================================*/ - T = ( char ** )malloc( (*nSetIDs+1) * sizeof( char * ) ); - for ( j = 0; j <= *nSetIDs; ++j ) { - T[j] = NULL; - } - F = HDFfileList; - while ( F != NULL ) { - PabloID = F->PabloID ; - if ( T[PabloID] == NULL ) { - T[PabloID] = ( char * )malloc( strlen( F->fileName ) + 1 ); - strcpy( T[PabloID], F->fileName ) ; - } - free((void *)(F->fileName)); - G = F; - F = F->ptr; - free ( (void *)G ); - } - *Names = T; -} -/*======================================================================* -// This routine writes SDDF packets to SDDF file containing information * -// about the named identifiers found in the program. * -//======================================================================*/ -void writeHDFNamePacketsRT( char **Names, int numSetIDs ) -{ - int j; - HDFNamePacket_t NamePkt; - char *BUFF, *fName; - int buffSize; - /*==============================================================* - // Allocate a buffer to hold the packet. Allow 80 chars for * - // identifier name. * - //==============================================================*/ - buffSize = sizeof(HDFNamePacket_t) + 80; - BUFF = (char *)malloc(buffSize); - /*==============================================================* - // Fill in constant information * - //==============================================================*/ - NamePkt.packetType = PKT_DATA; - NamePkt.packetTag = FAMILY_NAME; - /*==============================================================* - // Fill in named identifier information and write to SDDF file * - //==============================================================*/ - for ( j = 1; j <= numSetIDs; ++j ) { - fName = Names[j]; - NamePkt.packetLength = (int)(sizeof(NamePkt) + strlen(fName)); - NamePkt.fileType = 0; /* not currently used */ - NamePkt.fileID = j; - NamePkt.nameLen = (int)strlen(fName) ; - if ( buffSize < NamePkt.packetLength ) { - free((void *)BUFF) ; - buffSize = NamePkt.packetLength + 80; - BUFF = (char *)malloc( buffSize ) ; - } - /*===========================================================* - // Copy packet data and tack on identifier name * - //===========================================================*/ - memcpy( BUFF, &NamePkt, sizeof(NamePkt) ); - memcpy( BUFF + sizeof(NamePkt) , fName, strlen(fName) ); - putBytes( BUFF , NamePkt.packetLength ) ; - } - free((void *)BUFF); -} -/*======================================================================* -// Tag xRef field of all records in this queue with the hdfID of the * -// highest level caller. Also * -// This routine takes the records after they have been tagged and adds * -// their fields to the apporopriate position in the HDFQueues structure * -//======================================================================*/ -void HDFupdateProcLists( void ) -{ - HDFnode_t *P, *Q; - long hdfID; - - hdfID = TagQueue->record.hdfID; - P = TagQueue; - while ( P != NULL ) { - P->record.xRef = hdfID; - Q = P->ptr; - HDFupdateProcs( P ); - P = Q; - } - TagQueue = NULL; -} -/*======================================================================* -// This routine takes as input a node pointer P and looks for a Total * -// record with this same eventID, hdfID and xRef. If such a record * -// exists, P is added to the record, otherwise a record is created and * -// its values are set to P's. * -//======================================================================*/ -void HDFupdateProcs( HDFnode_t *P ) -{ - int procIndex, eventID; - long hdfID, xRef; - HDFnode_t *Q; - eventID = P->eventID; - procIndex = ProcIndexForHDFEntry( eventID ); - hdfID = P->record.hdfID; - xRef = P->record.xRef; - Q = HDFQueues[ procIndex ]; - /*==============================================================* - // First determine if a tally node exists that matches the * - // eventID, hdfID and xRef of P. * - //==============================================================*/ - while ( Q != NULL && - (( Q->record.hdfID != hdfID ) || ( Q->record.xRef != xRef )) ) { - Q = Q->ptr; - } - if ( Q == NULL ) { - /*===========================================================* - // No tally record matches the hdfID and xRef so put P in * - // the queue. * - //===========================================================*/ - P->ptr = HDFQueues[ procIndex ]; - HDFQueues[ procIndex ] = P; - } else { - /*===========================================================* - // add P to the exiting record and free it. * - //===========================================================*/ - HDFrecordSum ( &Q->record , &P->record ); - free((void *)P); - } -} -/*======================================================================* -// Print SDDF records for all records in this linked list. * -//======================================================================*/ -void HDFSummarySDDF( HDFnode_t *P, int procIndex ) -{ - int i, j, arrayLen, nodeID, nCalls; - int allIOCount; - CLOCK allIOTime, excDur; - double t; - char buff[1024]; - char *Packet; - HDFnode_t *Q; - struct - { - int packetLen; - int packetType; - int packetTag; - int eventID; - double Seconds; - double IncDur; - double ExcDur; - long HDFid; - long XREFid; - } Header; - - Header.packetLen = sizeof(Header) - + sizeof(int) /* n Calls */ - + sizeof(int) /* array len */ - + nTallyFields*sizeof(double) /* times array */ - + sizeof(int) /* array len */ - + nTallyFields*sizeof(int) /* count array */ - + sizeof(int) /* array len */ - + nByteFields*sizeof(int) /* bytes array */ - + nHistFields*sizeof(int) /* array lens */ - + nHistFields*nBkts*sizeof(int) /* byte hist */ - + sizeof(int); /* nodeID */ - Header.packetTag = HDF_SUMMARY_FAMILY + - ( procIndex + 1 )*8 + RECORD_TRACE ; - Header.packetType = PKT_DATA; - nodeID = TRgetNode(); - while ( P != NULL ) { - Q = P->ptr; - /*===========================================================* - // Total the I/O time and counts * - //===========================================================*/ - allIOTime = zeroClock; - for ( j = FirstIO; j <= LastIO; ++j ) { - allIOTime = clockAdd( allIOTime, P->record.times[j] ); - } - P->record.times[AllIO] = allIOTime; - - allIOCount = 0; - for ( j = FirstIO; j <= LastIO; ++j ) { - allIOCount += P->record.counts[j]; - } - P->record.counts[AllIO] = allIOCount; - /*===========================================================* - // compute exclusive duration. * - //===========================================================*/ - excDur = clockSubtract(P->record.incDur,allIOTime); - excDur = clockSubtract(excDur,P->record.times[HDF_]); - excDur = clockSubtract(excDur,P->record.times[MPI]); - /*===========================================================* - // print header information. * - //===========================================================*/ - Header.eventID = P->eventID; - Header.Seconds = clockToSeconds(P->record.lastCall); - Header.IncDur = clockToSeconds( P->record.incDur ); - Header.ExcDur = clockToSeconds(excDur); - Header.HDFid = P->record.hdfID; - Header.XREFid = P->record.xRef; - Packet = buff; - memcpy( Packet, &Header, sizeof(Header) ); - Packet += sizeof(Header); - /*===========================================================* - // copy number of calls to Packet. * - //===========================================================*/ - nCalls = P->record.nCalls; - memcpy( Packet, &nCalls, sizeof(int) ); - Packet += sizeof(int); - /*===========================================================* - // copy length of times array and times array to Packet. * - //===========================================================*/ - arrayLen = nTallyFields; - memcpy( Packet, &arrayLen, sizeof(int) ); - Packet += sizeof(int); - for ( j = 0; j < nTallyFields; ++j ) { - t = clockToSeconds(P->record.times[j]); - memcpy( Packet, &t, sizeof(double) ); - Packet += sizeof(double); - } - /*===========================================================* - // copy length of counts array and counts array to Packet. * - //===========================================================*/ - arrayLen = nTallyFields; - memcpy( Packet, &arrayLen, sizeof(int) ); - Packet += sizeof(int); - memcpy( Packet, P->record.counts, nTallyFields*sizeof(int) ); - Packet += nTallyFields*sizeof(int); - /*===========================================================* - // copy length of bytes array and bytes array to Packet. * - //===========================================================*/ - arrayLen = nByteFields; - memcpy( Packet, &arrayLen, sizeof(int) ); - Packet += sizeof(int); - memcpy( Packet, P->record.bytes, nByteFields*sizeof(int) ); - Packet += nByteFields*sizeof(int); - /*===========================================================* - // copy length of historgram arrays and arrays to Packet. * - //===========================================================*/ - arrayLen = nBkts; - for ( i = 0; i < nHistFields; ++i ) - { - memcpy( Packet, &arrayLen, sizeof(int) ); - Packet += sizeof(int); - memcpy( Packet, P->record.Hists[i], nBkts*sizeof(int) ); - Packet += nBkts*sizeof(int); - } - memcpy( Packet, &nodeID, sizeof(int) ); - Packet += sizeof(int); - arrayLen = Packet-buff; - memcpy(buff,&arrayLen,sizeof(int)); - putBytes( buff, Packet-buff ); - P = Q; - } -} -/*======================================================================* -// Initialize a node. * -//======================================================================*/ -void HDFnodeInit ( HDFnode_t *S ) -{ - *S = InitNode; -} -/*======================================================================* -// Compute IO totals, exclusive durations of the input record T * -// then add the fields of T to that of S. * -//======================================================================*/ -void HDFrecordSum ( HDFrec_t *S, HDFrec_t *T ) -{ - int i; - int j; - - S->nCalls += T->nCalls; - if ( clockCompare ( S->lastCall, T->lastCall ) < 0 ) - { - S->lastCall = T->lastCall ; - } - S->incDur = clockAdd ( S->incDur, T->incDur ); - for ( j = 0; j < nTallyFields; ++j ) - { - S->times[j] = clockAdd( S->times[j] , T->times[j] ) ; - } - for ( j = 0; j < nTallyFields; ++j ) - { - S->counts[j] += T->counts[j] ; - } - for ( j = 0; j < nByteFields; ++j ) - { - S->bytes[j] += T->bytes[j] ; - } - for ( j = 0; j < nHistFields; ++j ) - { - for ( i = 0; i < nBkts; ++i ) - { - S->Hists[j][i] += T->Hists[j][i] ; - } - } -} -/*======================================================================* -// Return the field index corresponding to an IO event ID. The fields * -// are specified in an enum statement in an include file. * -//======================================================================*/ -int getHDFFieldIndex( int eventID ) -{ - int result = -1; - switch ( eventID ) - { - case ID_malloc: - case -ID_malloc: - { - result = Malloc; - break; - } - case openBeginID: - case openEndID: - case fopenBeginID: - case fopenEndID: - { - result = Open; - break; - } - case closeBeginID: - case closeEndID: - case fcloseBeginID: - case fcloseEndID: - { - result = Close; - break; - } - case readBeginID: - case readEndID: - case freadBeginID: - case freadEndID: - { - result = Read; - break; - } - case lseekBeginID: - case lseekEndID: - case fseekBeginID: - case fseekEndID: - { - result = Seek; - break; - } - case writeBeginID: - case writeEndID: - case fwriteBeginID: - case fwriteEndID: - { - result = Write; - break; - } - case fflushBeginID: - case fflushEndID: - case flushBeginID: - case flushEndID: - { - result = Misc; - break; - } - case rewindBeginID: - case rewindEndID: - case fsetposBeginID: - case fsetposEndID: - { - result = Misc; - break; - } -#ifdef creadBeginID - case creadBeginID: - case creadEndID: - case creadvBeginID: - case creadvEndID: - { - result = Read; - break; - } - case cwriteBeginID: - case cwriteEndID: - case cwritevBeginID: - case cwritevEndID: - { - result = Write; - break; - } - case ireadBeginID: - case ireadEndID: - case ireadvBeginID: - case ireadvEndID: - { - result = Aread; - break; - } - case iwriteBeginID: - case iwriteEndID: - case iwritevBeginID: - case iwritevEndID: - { - result = Awrite; - break; - } - case iowaitBeginID: - case iowaitEndID: - { - result = Wait; - break; - } - case iodoneBeginID: - case iodoneEndID: - { - result = Misc; - break; - } - case gopenBeginID: - case gopenEndID: - { - result = Open; - break; - } - case iomodeBeginID: - case iomodeEndID: - case setiomodeBeginID: - case setiomodeEndID: - case lsizeBeginID: - case lsizeEndID: - case forflushBeginID: - case forflushEndID: - { - result = Misc; - break; - } -#endif - } - return result; -} -/*======================================================================* -// This routine determines the field index in the bytes array of the * -// HDF records which correspond to a given IO operation. If the * -// operation does not transfer bytes, (e.g., open operation), -1 is * -// returned. * -//======================================================================*/ -int getHDFByteFieldIndex( int Operation ) -{ - int result; - switch ( Operation ) - { - case Malloc: - { - result = MallocBytes; - break; - } - case Read: - { - result = ReadBytes; - break; - } - case Write: - { - result = WriteBytes; - break; - } - case Aread: - { - result = AreadBytes; - break; - } - case Awrite: - { - result = AwriteBytes; - break; - } - case MPIOread: - { - result = MPIOreadBytesReq; - break; - } - case MPIOwrite: - { - result = MPIOwriteBytesReq; - break; - } - case MPIOreadAll: - { - result = MPIOreadAllBytesReq; - break; - } - case MPIOwriteAll: - { - result = MPIOwriteAllBytesReq; - break; - } - case MPIOiRead: - { - result = MPIOiReadBytesReq; - break; - } - case MPIOiWrite: - { - result = MPIOiWriteBytesReq; - break; - } - case MPIOreadTrans: - { - result = MPIOreadBytesTrans; - break; - } - case MPIOwriteTrans: - { - result = MPIOwriteBytesTrans; - break; - } - case MPIOreadAllTrans: - { - result = MPIOreadAllBytesTrans; - break; - } - case MPIOwriteAllTrans: - { - result = MPIOwriteAllBytesTrans; - break; - } - default: - { - result = -1; - break; - } - } - return result; -} -/*======================================================================* -// This routine writes the SDDF packet descriptors for the HDF summary * -// records to the output file. * -//======================================================================*/ -void _hdfDescriptorRT( char *recordName, char *recordDescription, - int recordFamily ) -{ - static char recordBuffer[ 4096 ]; - int recordLength; - - hdfRecordPointer = recordBuffer; - /*==================================================================* - // Allow space at the beginning of the record for the packet * - //length which will be computed after the packet is complete. * - //==================================================================*/ - sddfWriteInteger( &hdfRecordPointer, 0 ); - /*==================================================================* - // The record type, tag, and name * - //==================================================================*/ - sddfWriteInteger( &hdfRecordPointer, PKT_DESCRIPTOR ); - sddfWriteInteger( &hdfRecordPointer, ( recordFamily | RECORD_TRACE ) ); - sddfWriteString( &hdfRecordPointer, recordName ); - /*==================================================================* - // The record attribute count and string pair * - //==================================================================*/ - sddfWriteInteger( &hdfRecordPointer, 1 ); - sddfWriteString( &hdfRecordPointer, "description" ); - sddfWriteString( &hdfRecordPointer, recordDescription ); - /*==================================================================* - // The record field count * - //==================================================================*/ - sddfWriteInteger( &hdfRecordPointer, 16 ); - WRITE_HDF_FIELD( "Event Identifier", - "Event ID", - "Corresponding Event", - INTEGER, 0 ); - WRITE_HDF_FIELD( "Seconds", - "Seconds", - "Floating Point Timestamp", - DOUBLE, 0 ); - WRITE_HDF_FIELD( "Inclusive Duration", - "Inclusive Duration", - "Inclusive Duration of this Procedure", - DOUBLE, 0 ); - WRITE_HDF_FIELD( "Exclusive Duration", - "Exclusive Duration", - "Excludes IO, MPI-IO and other HDF calls", - DOUBLE, 0 ); - WRITE_HDF_FIELD2("HDF ID", - "HDF ID", "Identifier number", - "0", "No HDF ID specified", - LONG, 0 ); - WRITE_HDF_FIELD( "Xref ID", - "Cross Reference", - "Index of related HDF ID or 0 if none", - LONG, 0 ); - WRITE_HDF_FIELD( "N Calls", - "N Calls", - "Number of Calls to this Proc", - INTEGER, 0 ); - WRITE_HDF_FIELD( "Times Array", - "Times Array", - "Array of Total Operation Times", - DOUBLE, 1 ); - WRITE_HDF_FIELD( "Counts Array", - "Counts Array", - "Array of Total Operation Counts", - INTEGER, 1 ); - WRITE_HDF_FIELD( "Bytes Array", - "Bytes Array", - "Array of Total Bytes Transferred", - INTEGER, 1 ); - WRITE_HDF_FIELD( "Malloc Histogram", - "Malloc Histogram", - "Historgram of size Malloc Requests", - INTEGER, 1 ); - WRITE_HDF_FIELD( "Read Histogram", - "Read Histogram", - "Historgram of size Read Requests", - INTEGER, 1 ); - WRITE_HDF_FIELD( "Write Histogram", - "Write Histogram", - "Historgram of size Write Requests", - INTEGER, 1 ); - WRITE_HDF_FIELD( "Aread Histogram", - "Aread Histogram", - "Historgram of size Asynch Read Requests", - INTEGER, 1 ); - WRITE_HDF_FIELD( "Awrite Histogram", - "Awrite Histogram", - "Historgram of size Asynch Write Requests", - INTEGER, 1 ); - WRITE_HDF_FIELD( "Processor Number", - "Node", - "Processor number", - INTEGER, 0 ); - /*=================================================================== - // The entire record descriptor packet has been written. * - // Compute and update the record length. * - // Write the completed record. * - //==================================================================*/ - recordLength = (int)(hdfRecordPointer - recordBuffer); - - hdfRecordPointer = recordBuffer; - sddfWriteInteger( &hdfRecordPointer, recordLength ); - - putBytes( recordBuffer, (unsigned) recordLength ); -} - -/*======================================================================* -// Internal Routine: writeHDFRecDescrptrsRT * -// Writes record descriptors for the HDF events. * -//======================================================================*/ -void writeHDFRecDescrptrsRT( void ) -{ - int j, FAMILY; - char BUF1[256], BUF2[256] ; - char buff[41]; - _hdfNameDescriptor(); /* Descriptor for named identifiers */ - for ( j = 0; j < NumHDFProcs; ++j ) { - if ( HDFQueues[j] != NULL ) { - getHDFprocName( j, buff ); - strcpy( BUF2, "HDF "); - strcat( BUF2, buff ); - strcat( BUF2, " Procedure Summary"); - strcpy( BUF1, BUF2 ); - strcat( BUF1, " Trace"); - FAMILY = HDF_SUMMARY_FAMILY + (j + 1)*8; - _hdfDescriptorRT( BUF1, BUF2, FAMILY ); - } - } - return; -} -/*======================================================================* -// This routine prints the Pablo IDs assigned to named HDF identifiers * -//======================================================================*/ -void printFileMappingsRT( char *mapFile, char **Names, int nPabloIDs ) -{ - int i; - FILE *ptr; - ptr = fopen( mapFile, "w" ); - - if ( ptr == NULL ) { - fprintf(stderr, - "Couldn't open map file %s - none created.\n",mapFile); - return; - } - - fprintf(ptr,"\n\nPablo ID to HDF Name mappings:\n"); - fprintf(ptr,"------------------------------\n"); - for ( i = 1; i <= nPabloIDs; i++ ) { - fprintf(ptr,"%4d %s\n",i,Names[i] ); - } - fprintf(ptr,"\n\n"); - fclose( ptr ); -} -/************************************************************************/ -/* _hdfNameDescriptor */ -/* Generate a SDDF binary format record descriptor for the */ -/* named identifiers used during execution. */ -/************************************************************************/ -void _hdfNameDescriptor( void ) -{ - static char recordBuffer[ 4096 ]; - int recordLength; - -#ifdef PABLODEBUG - fprintf( debugFile, "_hdfExitTraceDescriptor entered\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - hdfRecordPointer = recordBuffer; - /********************************************************************/ - /* Allow space at the beginning of the record for the packet */ - /*length which will be computed after the packet is complete. */ - /********************************************************************/ - sddfWriteInteger( &hdfRecordPointer, 0 ); - /********************************************************************/ - /* The record type, tag, and name */ - /********************************************************************/ - sddfWriteInteger( &hdfRecordPointer, PKT_DESCRIPTOR ); - sddfWriteInteger( &hdfRecordPointer, ( FAMILY_NAME ) ); - sddfWriteString( &hdfRecordPointer, "HDF Name Identifier Record" ); - /********************************************************************/ - /* The record attribute count and string pair */ - /********************************************************************/ - sddfWriteInteger( &hdfRecordPointer, 1 ); - sddfWriteString( &hdfRecordPointer, "description" ); - sddfWriteString( &hdfRecordPointer, "HDF Name Identifier Record" ); - /********************************************************************/ - /* The record field count */ - /********************************************************************/ - sddfWriteInteger( &hdfRecordPointer, 3); - /********************************************************************/ - /* Create fields */ - /********************************************************************/ - WRITE_HDF_FIELD( "Identifier Type", - "Data Set Type", - "Data Set Identifier Type", - INTEGER, 0 ); - WRITE_HDF_FIELD2( "HDF ID", - "HDF ID", "File, Data Set or Dim Identifier number", - "0", "No HDF ID specified", - INTEGER, 0 ); - WRITE_HDF_FIELD( "HDF Name", - "HDF Name", "Name of File, Data Set or Dim", - CHARACTER, 1 ); - - recordLength = (int)(hdfRecordPointer - recordBuffer); - - hdfRecordPointer = recordBuffer; - sddfWriteInteger( &hdfRecordPointer, recordLength ); - - putBytes( recordBuffer, (unsigned) recordLength ); -} -#endif /* PCF_BUILD */ diff --git a/pablo/PabloHDF_SDDF.c b/pablo/PabloHDF_SDDF.c deleted file mode 100644 index 6326702..0000000 --- a/pablo/PabloHDF_SDDF.c +++ /dev/null @@ -1,820 +0,0 @@ -/* - * This file is an extension to NCSA HDF to enable the use of the - * Pablo trace library. - * - * Developed by: The TAPESTRY Parallel Computing Laboratory - * University of Illinois at Urbana-Champaign - * Department of Computer Science - * 1304 W. Springfield Avenue - * Urbana, IL 61801 - * - * Copyright (c) 1995 - * The University of Illinois Board of Trustees. - * All Rights Reserved. - * - * PABLO is a registered trademark of - * The Board of Trustees of the University of Illinois - * registered in the U.S. Patent and Trademark Office. - * - * Author: George Xin Zhou (xzhou@cs.uiuc.edu) - * Contributing Author: Jonathan M. Reid (jreid@cs.uiuc.edu) - * - * Project Manager and Principal Investigator: - * Daniel A. Reed (reed@cs.uiuc.edu) - * - * Funded by: National Aeronautics and Space Administration under NASA - * Contracts NAG-1-613 and USRA 5555-22 and by the Advanced Research - * Projects Agency under ARPA contracts DAVT63-91-C-0029 and - * DABT63-93-C-0040. - * - */ -/*======================================================================* -// File: PabloHDF_SDDF.c * -// Purpose: support use of Pablo trace library to analyze HDF * -// performance * -// Contents: * -// HDFinitTrace_SDDF: initialize SDDF tracing * -// HDFendTrace_SDDF: end SDDF tracing * -// startHDFtraceEvent: record start of HDF procedure * -// endHDFtraceEvent: record end of HDF proc * -// preInitHDFProcTrace: called by HDFinitTrace_SDDF to set up SDDF * -// interface function calls * -// initHDFProcTrace: called by HDFinitTrace_SDDF to initialize data * -// structures used in tracing HDF procedures. * -// writeHDFProcRecordDescriptors: * -// generates the record descriptors for the HDF * -// procedure entry/exit event families. * -// HDFprocEventRecord: generates trace records for events which are * -// to produce procedure entry or exit event family * -// trace records. * -// findHDFProcEvent: retruns procedure entry/exit index * -// _hdfTraceEntryDescriptor: * -// Generate a SDDF binary format record descriptor * -// for HDF procedure entries * -// _hdfTraceExitDescriptor: * -// Generate a SDDF binary format record descriptor * -// for the HDF procedure exits * -//======================================================================*/ -#ifndef PCF_BUILD -#include <stdio.h> - -#include "H5config.h" -#undef H5_HAVE_PABLO -#include "H5private.h" -#define H5_HAVE_PABLO -#include "ProcIDs.h" - -#include "SystemDepend.h" -#include "SDDFparam.h" -#include "TraceParam.h" -#include "Trace.h" -#include "IOTrace.h" -#include "HDFTrace.h" -void IOtraceInit( char*, int, int ); -void HDFendTrace_SDDF(void); -void startHDFtraceEvent(int eventID); -void endHDFtraceEvent(int , int , char *, int ); -int preInitHDFProcTrace( void ); -int initHDFProcTrace( int , int * ); -int writeHDFProcRecordDescriptors( void ); -int findHDFProcEvent( int ) ; -TR_RECORD *HDFprocEventRecord( int, TR_EVENT *, CLOCK, HDFsetInfo *, unsigned ); -TR_RECORD *miscEventRecord( int , TR_EVENT *, CLOCK, void *, unsigned ); -void _hdfMiscDescriptor( void ); -void _hdfProcNameDescriptor( void ); -/*int setEventRecordFunction( int, void *(*)() );*/ -int setEventRecordFunction( int, TR_RECORD *(*)() ); -void HDFtraceIOEvent( int, void *, unsigned ); -void initIOTrace( void ); -void enableIOdetail( void ); -void disableLifetimeSummaries( void ); -void disableTimeWindowSummaries( void ); -void disableFileRegionSummaries( void ); -void _hdfTraceDescriptor( char *, char *, int ); -void createHDFTraceDescriptor( int ); -void HDFfinalTimeStamp( void ); -void getHDFprocName( int index, char buff[41] ); -void endIOTrace(); - -#define PABLO 1 -/* on the ipsc/860 we don't include unistd.h */ -#ifndef __NX -#include <unistd.h> -#endif - -#define returnRecord(x) return x; - -#ifdef H5_HAVE_MPIOTRACE - int initMPIOTrace( char *, int, int ); - void endMPIOTrace( void ) ; -#else - void endMPIOTrace( void ) {return;} -#endif -extern char *hdfRecordPointer; -/*======================================================================* -// Prototypes of functions in this file. * -//======================================================================*/ -void HDFinitTrace_SDDF( char *, int ); -/*======================================================================* -// Each procedure being traced has associated with it a distinct pair * -// of entry and exit event IDs. This code maintains a vector of such * -// matchings which permits the ready identification of an event ID as * -// being either an entry event or an exit event and for which procedure.* -//======================================================================*/ -typedef struct procEventMatch { - int entryID; /* procedure entry event ID */ - int exitID; /* procedure exit event ID */ -} PROC_EVENTS; - -static PROC_EVENTS *procEvents = /* array of event ID pairs */ - (PROC_EVENTS *) 0; -/*======================================================================* -// For each procedure being traced this code maintains a stack of * -// procedure entry times. Each procedure entry event causes the * -// corresponding procedure's stack to be pushed, each procedure exit * -// event causes the corresponding procedure's stack to be popped, and * -// from the difference in time between entry and exit the procedure * -// duration may be calculated in a very straightforward subtraction. * -// The above procedure entry-exit event ID matching is used to map * -// events to their corresponding procedures. In addition, the * -// cumulative total of these procedure durations is maintained for all * -// traced subprocedures of each traced procedure. That is, when a * -// traced procedure exits, it increases this duration sum for its most * -// immediate traced ancestor procedure. By subtracting this * -// subprocedure duration sum from the traced procedure's inclusive * -// duration, we arrive at the exclusive duration of the procedure. * -//======================================================================*/ -typedef struct procEntryTime { - CLOCK entryTime; /* when proc entered */ - CLOCK subProcTime; /* subproc duration */ - struct procEntryTime *nextTime; /* stack pointer down */ - struct procEntryTime *ancestorProc; /* traced ancestor */ -} PROC_ENTRY; - -/* -static PROC_ENTRY **procEntryStack =*/ /* array of pointers to */ -/* (PROC_ENTRY **) 0;*/ /* stack top elements */ -/*======================================================================* -// Define data structure types for procedure entry and exit trace * -// records, similarly to record data structures in Trace.h * -//======================================================================*/ - -/*======================================================================* -// TraceRecord Data packets: * -//======================================================================*/ -struct procTraceRecordData { - int packetLength; /* bytes in packet */ - int packetType; /* == PKT_DATA */ - int packetTag; /* FAMILY_PROCEXIT | RECORD_TRACE */ - int eventID; /* ID of corresponding event */ - double seconds; /* floating-point timestamp */ - long setID; /* index of file | Data Set accessed */ - int nodeNumber; /* occurred on which node */ - int nameLen; /* Length of file or data set name */ - /* name comes next, but no space is allocated */ -}; -#define procTraceRecLen 6*sizeof(int) + sizeof(double) +sizeof(long) -/*======================================================================* -// misc Record Data packets: * -//======================================================================*/ -struct miscTraceRecordData -{ - int packetLength; /* bytes in packet */ - int packetType; /* == PKT_DATA */ - int packetTag; /* FAMILY_MISC | RECORD_TRACE */ - int eventID; /* ID of corresponding event */ - double seconds; /* floating-point timestamp */ - double duration; /* floating-point operation duration */ - unsigned long bytes; /* number of bytes requested */ - int nodeNumber; /* occurred on which node */ -}; -#define miscTraceLen 5*sizeof(int) + 2*sizeof(double) +sizeof(long) -/*======================================================================* -// The procEntries array specifies the event IDs of procedure entry * -// events. * -//======================================================================*/ -int procEntries[] = -{ -0, 0, 0, 0, 0, -#include "HDFidList.h" -ID_HDF_Last_Entry -}; -/*======================================================================* -// The procEntryCalled array indicates whether or not a procedure entry * -// was called. * -//======================================================================*/ -int *procEntryCalled; -/*======================================================================= -// NAME * -// HDFinitTrace_SDDF -- initalize HDF tracing with SDDF records * -// USAGE * -// HDFinitTrace_SDDF( traceFileName, porcNum ) * -// PARAMETERS * -// char *traceFileName -- name of trace file to hold output * -// int procNum -- processor Number * -// RETURNS * -// None * -//======================================================================*/ -void HDFinitTrace_SDDF( char *traceFileName, int procNum ) -{ - /*==================================================================== - // set traceFileName and set IO tracing switches. If MPIO * - // tracing is available, MPIO tracing will also be initialized. * - //===================================================================*/ -#ifdef H5_HAVE_MPIOTRACE -// int myNode; - /*==================================================================== - // in the parallel case, initialize MPI-IO tracing. This * - // will initialize the traceFileName and set the I/O tracing * - // switches. * - //===================================================================*/ - /*==================================================================== - // MPIO Tracing is supported in the Pablo Library. Let the * - // MPIO initialization be performed and handle the naming of * - // trace files. * - //===================================================================*/ - initMPIOTrace( traceFileName, procNum, RUNTIME_TRACE ); -// MPI_Comm_rank( MPI_COMM_WORLD, &myNode ); - setTraceProcessorNumber( procNum ); -#else - IOtraceInit( traceFileName, procNum, RUNTIME_TRACE ); - /*==================================================================== - // complete HDF initiailization. * - //===================================================================*/ - enableIOdetail(); - disableLifetimeSummaries(); - disableTimeWindowSummaries(); - disableFileRegionSummaries(); -#endif - preInitHDFProcTrace(); - initHDFProcTrace( sizeof(procEntries)/sizeof(int), procEntries ); -} -/*======================================================================= -// NAME * -// HDFendTrace_SDDF -- end HDF tracing * -// USAGE * -// HDFendTrace_SDDF() * -// RETURNS * -// None. * -//======================================================================*/ -void HDFendTrace_SDDF() -{ - HDFfinalTimeStamp(); -#ifdef H5_HAVE_MPIORACE - /*==================================================================== - // termintate MPI-IO tracing in the parallel case. This * - // will terminate the I/O tracing and close tracing as well. * - //===================================================================*/ - endMPIOTrace(); -#else - /*==================================================================== - // terminate tracing * - //===================================================================*/ - endIOTrace(); - endTracing(); -#endif -} -/*======================================================================= -// NAME * -// initHDFProcTrace: * -// This function initializes data structures specific to * -// the procedure entry/exit tracing extensions of the Pablo * -// instrumentation library. The argument numProcs specifies * -// how many procedures are to be traced. The argument procEntryID * -// is a vector specifying the event IDs to be use as entry events * -// for each of the procedures. The negative value is used for * -// the exit event ID. * -// USAGE * -// result = initHDFProcTrace(numProcs,procEntryID) * -// PARAMETERS * -// int numProcs -- number of Procedures to be initialized * -// int *procEntryID -- array of id entry codes for these procedures * -// RETURNS * -// SUCCESS or FAILURE * -//======================================================================*/ -int initHDFProcTrace( int numProcs, int *procEntryID ) -{ - int procIndex; - int IX; - int ID; - - if (( numProcs <= 0 ) || ( procEntryID == (int *) 0 ) ) - { - return FAILURE; - } - /*==================================================================== - // Allocate space to store a copy of the procedure entry-exit * - // event ID matchings and also the procedure entry stacks. * - //===================================================================*/ - procEvents = (PROC_EVENTS *)TRgetBuffer((numProcs+4)*sizeof(PROC_EVENTS)); - - if ( procEvents == (PROC_EVENTS *) 0 ) - { - TRfailure( "cannot allocate procedure events matching" ); - } - - procEntryCalled = ( int *)malloc( numProcs*sizeof(int) ); - if ( procEvents == NULL ) - { - TRfailure( "cannot allocate procedure Called indicators" ); - } - /*==================================================================== - // Initialize the procedure events matching from the arguments * - // passed. Configure the trace record-generating function for * - // these events. Initialize the flags indicating whether or * - // not the procedure was called. * - //===================================================================*/ - for ( procIndex = 0; procIndex < numProcs; procIndex++ ) - { - - IX = procEntryID[ procIndex ]; - ID = HDFIXtoEventID( IX ); - procEvents[ procIndex ].entryID = ID; - procEvents[ procIndex ].exitID = -ID; - - setEventRecordFunction( ID, HDFprocEventRecord ); - setEventRecordFunction( -ID, HDFprocEventRecord ); - procEntryCalled[ procIndex ] = 0; - - } - - /*==================================================================== - // Initialize the procedure events for malloc. * - // Configure the trace record-generating function for this * - // event. * - //===================================================================*/ - procEvents[ numProcs ].entryID = ID_malloc; - procEvents[ numProcs ].exitID = -ID_malloc; - setEventRecordFunction( ID_malloc, miscEventRecord ); - setEventRecordFunction( -ID_malloc, miscEventRecord ); - procEvents[ numProcs+1 ].entryID = ID_free; - procEvents[ numProcs+1 ].exitID = -ID_free; - setEventRecordFunction( ID_free, miscEventRecord ); - setEventRecordFunction( -ID_free, miscEventRecord ); - - return SUCCESS; -} -/*======================================================================= -// NAME * -// preInitHDFProcTrace: * -// This function calls the trace library interface function * -// setRecordDescriptor, which records the address of the * -// procedure that generates the record descriptors for the * -// procedure trace event families. It is automatically * -// invoked by HDFinitTrace_SDDF. * -// USAGE * -// result = preInitHDFProcTrace(); * -// RESULT * -// SUCCESS or FAILURE * -/=======================================================================*/ -int preInitHDFProcTrace( void ) -{ - static int preInitDone = FALSE; - - if ( preInitDone == TRUE ) - { - return SUCCESS; - } - /*==================================================================== - // Give the instrumentation library a pointer to the functions * - // in which we output the specialized record descriptors for * - // procedure entry/exit. * - //===================================================================*/ - setRecordDescriptor( writeHDFProcRecordDescriptors ); - - preInitDone = TRUE; - return SUCCESS; -} -/*======================================================================= -// NAME * -// writeHDFProcRecordDescriptors: * -// This function generates the record descriptors for the HDF * -// procedure entry/exit event families. It will be invoked * -// by the instrumentation library initialization routines. * -// Patterned after instrumentation library internal function * -// writeRecordDescriptors. * -// USAGE * -// result = writeHDFProcRecordDescriptors(); * -// RESULT * -// SUCCESS * -/=======================================================================*/ -int writeHDFProcRecordDescriptors( void ) -{ -#ifdef PABLODEBUG - fprintf( debugFile, "writeHDFProcRecordDescriptors\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - - _hdfMiscDescriptor(); - -#ifdef PABLODEBUG - fprintf( debugFile, "writeHDFProcRecordDescriptors done\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - return SUCCESS; -} -/*======================================================================= -// NAME * -// HDFprocEventRecord: * -// This function generates trace records for events which are * -// to produce procedure entry or exit event family trace records. * -// Patterned after the instrumentation library internal functions * -// externalEventRecord and sddfRecord. * -// USAGE * -// REC = HDFprocEventRecord( recordType, eventPointer, timeStamp, * -// dataPointer, dataLength) * -// PARAMETERS * -// int recordType -- type of event record * -// TR_EVENT eventPointer -- pointer to event data structure * -// CLOCK timeStamp -- time event is recorded * -// HDFsetInfo dataPointer -- information about HDF data set accessed * -// unsigned dataLength -- dummy for compatability * -// RETURNS * -// pointer to trace record for this event * -//======================================================================*/ -TR_RECORD * -HDFprocEventRecord( int recordType, - TR_EVENT *eventPointer, - CLOCK timeStamp, - HDFsetInfo *dataPointer, - unsigned dataLength ) -{ - static TR_RECORD traceRecord; - static void *recordBuffer = NULL; - static int bufferLength = 0; - struct procTraceRecordData *TraceRecordHeader; - int procIndex; - int recordFamily; - char *namePtr; - -#ifdef PABLODEBUG - fprintf( debugFile, "HDFprocEventRecord\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - - /*==============================================================* - // Find the index in the tables for the procedure corresponding * - // to this eventID. * - //==============================================================*/ - procIndex = findHDFProcEvent( eventPointer->eventID ); - if ( procIndex < 0 ) - { - return nullRecordFunction( recordType, eventPointer, - timeStamp, (char *)dataPointer, dataLength ); - } - /*===================================================================* - // Produce a packet for the name of the procedure if one has * - // not already been produced. * - //===================================================================*/ - if ( procEntryCalled[procIndex] == 0 ) { - createHDFTraceDescriptor( procIndex ); - procEntryCalled[procIndex] = 1; - } - /*===================================================================* - // Determine whether this is a procedure entry or a procedure * - // exit family event by lookup in the procedure event ID * - // matching. * - //===================================================================*/ - recordFamily = HDF_FAMILY + ( procIndex + 1)*8; - /*===================================================================* - // The time stamp stored in the event descriptor will be used * - // unless one is specified in the timeStamp parameter. * - //===================================================================*/ - if ( clockCompare( timeStamp, noSuchClock ) == 0 ) { - timeStamp = eventPointer->eventLast; - } - /*===================================================================* - // Determine how many bytes of storage will be needed for the * - // contents of the trace record. * - //===================================================================*/ - traceRecord.recordLength = sizeof *TraceRecordHeader; - if ( dataPointer != NULL && dataPointer->setName != NULL ) - { - traceRecord.recordLength += strlen( dataPointer->setName ); - } - /*===================================================================* - // If there is a previously-allocated buffer and its size will * - // hold this record, re-use the buffer. Otherwise, deallocate * - // the buffer (if allocated) and allocate a bigger one. * - //===================================================================*/ - if ( bufferLength < traceRecord.recordLength ) - { - - if ( recordBuffer != NULL ) - { - TRfreeBuffer( recordBuffer ); - } - - recordBuffer = (char *)TRgetBuffer( traceRecord.recordLength ); - - if ( recordBuffer == NULL ) - { - TRfailure( "cannot allocate storage for trace record" ); - } - bufferLength = traceRecord.recordLength; - } - - traceRecord.recordContents = recordBuffer; - /*===================================================================* - // Load the trace record fields into the allocated buffer * - //===================================================================*/ - TraceRecordHeader = (struct procTraceRecordData *)recordBuffer; - TraceRecordHeader->packetLength = traceRecord.recordLength; - TraceRecordHeader->packetType = PKT_DATA; - TraceRecordHeader->packetTag = recordFamily | recordType; - TraceRecordHeader->seconds = clockToSeconds( timeStamp ); - TraceRecordHeader->eventID = eventPointer->eventID; - TraceRecordHeader->nodeNumber = TRgetNode(); - - if ( dataPointer != 0 ) - { - TraceRecordHeader->setID = dataPointer->setID; - if (dataPointer->setName != NULL ) - { - TraceRecordHeader->nameLen = (int)strlen( dataPointer->setName ); - /*==============================================================* - // copy name directly into the end of the buffer. * - //==============================================================*/ - namePtr = (char *)TraceRecordHeader + procTraceRecLen; - memcpy(namePtr, dataPointer->setName, TraceRecordHeader->nameLen); - } - else - { - TraceRecordHeader->nameLen = 0; - } - } - else - { - TraceRecordHeader->setID = 0; - TraceRecordHeader->nameLen = 0; - } -#ifdef PABLODEBUG - fprintf( debugFile, "HDFprocEventRecord done\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - returnRecord(&traceRecord); -} -/*======================================================================* -// Internal Routine: miscEventRecord * -// Called for misc start and end events. * -//======================================================================*/ -TR_RECORD *miscEventRecord( int recordType, - TR_EVENT *eventPointer, - CLOCK timeStamp, - void *dataPointer, - unsigned dataLength ) -{ - static TR_RECORD traceRecord; - static struct miscTraceRecordData miscRecord; - static int initialized = FALSE; - int eventID; - - if ( clockCompare( timeStamp, noSuchClock ) == 0 ) - { - timeStamp = eventPointer->eventLast; - } - - eventID = eventPointer->eventID; - if ( ! initialized ) - { - miscRecord.packetLength = sizeof( miscRecord ); - miscRecord.packetType = PKT_DATA; - miscRecord.packetTag = FAMILY_MISC | RECORD_TRACE; - miscRecord.nodeNumber = traceProcessorNumber; - - traceRecord.recordLength = miscRecord.packetLength; - traceRecord.recordContents = (char *) &miscRecord; - initialized = TRUE; - } - - switch ( eventID ) - { - case ID_malloc: - case ID_free: - miscRecord.seconds = clockToSeconds( timeStamp ) ; - miscRecord.eventID = eventID ; - break; - case -ID_malloc: - case -ID_free: - miscRecord.bytes = *(int *)dataPointer; - miscRecord.duration = clockToSeconds( timeStamp) - - miscRecord.seconds; - return &traceRecord; /* generate trace record */ - default: - fprintf( stderr, "miscEventRecord: unknown eventID %d\n", eventID ); - break; - } - /*===================================================================* - // If we get here then no trace record generated. Normally we * - // should get here if this is an entry call. * - //===================================================================*/ - return( nullRecordFunction( recordType, eventPointer, timeStamp, - dataPointer, dataLength ) ); -} -/*======================================================================* -// NAME * -// findHDFProcEvent: * -// Search the procedure entry/exit event ID matching data * -// structure for an event ID (either entry or exit) which is * -// the same as the argument eventID. If found, return the * -// index from that table, which will be between 0 and * -// numberProcedures - 1, inclusive. If not found, return -1; * -// USAGE * -// index = findHDFProcEvent * -// RETURNS * -// index of the procedure corresponding to this ID * -//======================================================================*/ -int findHDFProcEvent( int eventID ) -{ - int procIndex; - -#ifdef PABLODEBUG - fprintf( debugFile, "findHDFProcEvent\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - if ( isBeginHDFEvent(eventID) ) - { - procIndex = eventID - BEGIN_HDF; - } - else if ( isEndHDFEvent( eventID ) ) - { - procIndex = -eventID - BEGIN_HDF; - } - else - { - procIndex = -1 ; - } - return procIndex; -} -void createHDFTraceDescriptor( int Inx ) -{ - char BUF1[256]; - char BUF2[256] ; - char buff[41]; - int FAMILY; - getHDFprocName( Inx, buff ); - strcpy( BUF2, "HDF "); - strcat( BUF2, buff ); - strcat( BUF2, " Procedure"); - strcpy( BUF1, BUF2 ); - strcat( BUF1, " Trace"); - - FAMILY = HDF_FAMILY + (Inx + 1)*8; - _hdfTraceDescriptor( BUF1, BUF2, FAMILY ); -} -/*======================================================================* -// NAME * -// _hdfTraceDescriptor * -// Generate a SDDF binary format record descriptor for the * -// full trace class of events in the HDF procedure entry * -// USAGE * -// _hdfTraceDescriptro( recordName, recordDescription, recordFamily ) * -// RETURNS * -// void * -//======================================================================*/ -void _hdfTraceDescriptor( char *recordName, - char *recordDescription, - int recordFamily ) -{ - static char recordBuffer[ 4096 ]; - int recordLength; - - hdfRecordPointer = recordBuffer; - /*==================================================================== - // Allow space at the beginning of the record for the packet * - //length which will be computed after the packet is complete. * - //===================================================================*/ - sddfWriteInteger( &hdfRecordPointer, 0 ); - /*==================================================================== - // The record type, tag, and name * - //===================================================================*/ - sddfWriteInteger( &hdfRecordPointer, PKT_DESCRIPTOR ); - sddfWriteInteger( &hdfRecordPointer, ( recordFamily | RECORD_TRACE ) ); - sddfWriteString( &hdfRecordPointer, recordName ); - /*==================================================================== - // The record attribute count and string pair * - //===================================================================*/ - sddfWriteInteger( &hdfRecordPointer, 1 ); - sddfWriteString( &hdfRecordPointer, "description" ); - sddfWriteString( &hdfRecordPointer, recordDescription ); - /*===================================================================* - // The record field count * - //===================================================================*/ - sddfWriteInteger( &hdfRecordPointer, 5); - /*===================================================================* - // Create fields * - //===================================================================*/ - WRITE_HDF_FIELD( "Event Identifier", - "Event ID", - "Event Identifier Number", - INTEGER, - 0 ); - WRITE_HDF_FIELD( "Seconds", - "Seconds", - "Floating Point Timestamp", - DOUBLE, - 0 ); - WRITE_HDF_FIELD2( "HDF ID", - "HDF ID", - "File, Data Set or Dim Identifier number", - "0", - "No HDF ID specified", - LONG, - 0 ); - WRITE_HDF_FIELD( "Processor Number", - "Node", - "Processor number", - INTEGER, - 0 ); - WRITE_HDF_FIELD( "HDF Name", - "HDF Name", - "Name of File, Data Set or Dim", - CHARACTER, - 1 ); - - recordLength = (int)(hdfRecordPointer - recordBuffer); - - hdfRecordPointer = recordBuffer; - sddfWriteInteger( &hdfRecordPointer, recordLength ); - - putBytes( recordBuffer, (unsigned) recordLength ); -} -/*======================================================================* -// NAME * -// _hdfMiscDescriptor * -// Generate a SDDF binary format record descriptor for the * -// misc procedure * -// USAGE * -// _hdfMiscDescriptor() * -// RETURNS * -// void * -//======================================================================*/ -void _hdfMiscDescriptor( void ) -{ - static char recordBuffer[ 4096 ]; - int recordLength; - -#ifdef PABLODEBUG - fprintf( debugFile, "_hdfMiscDescriptor entered\n" ); - fflush( debugFile ); -#endif /* PABLODEBUG */ - hdfRecordPointer = recordBuffer; - /*===================================================================* - // Allow space at the beginning of the record for the packet * - //length which will be computed after the packet is complete. * - //===================================================================*/ - sddfWriteInteger( &hdfRecordPointer, 0 ); - /*===================================================================* - // The record type, tag, and name * - //===================================================================*/ - sddfWriteInteger( &hdfRecordPointer, PKT_DESCRIPTOR ); - sddfWriteInteger( &hdfRecordPointer, ( FAMILY_MISC | RECORD_TRACE ) ); - sddfWriteString( &hdfRecordPointer, "Misc Trace" ); - /*===================================================================* - // The record attribute count and string pair * - //===================================================================*/ - sddfWriteInteger( &hdfRecordPointer, 1 ); - sddfWriteString( &hdfRecordPointer, "description" ); - sddfWriteString( &hdfRecordPointer, "Misc Trace Record" ); - /*===================================================================* - // The record field count * - //===================================================================*/ - sddfWriteInteger( &hdfRecordPointer, 5); - /*===================================================================* - // Create fields * - //===================================================================*/ - WRITE_HDF_FIELD( "Event Identifier", - "Event ID", - "Event Identifier Number", - INTEGER, - 0 ); - WRITE_HDF_FIELD( "Seconds", - "Seconds", - "Floating Point Timestamp", - DOUBLE, - 0 ); - WRITE_HDF_FIELD( "Duration", - "Duration", - "Operation Duration", - DOUBLE, - 0 ); - WRITE_HDF_FIELD( "Bytes", - "Bytes", - "Bytes Requested", - LONG, - 0 ); - WRITE_HDF_FIELD( "Processor Number", - "Node", - "Processor number", - INTEGER, - 0 ); - - recordLength = (int)(hdfRecordPointer - recordBuffer); - - hdfRecordPointer = recordBuffer; - sddfWriteInteger( &hdfRecordPointer, recordLength ); - - putBytes( recordBuffer, (unsigned) recordLength ); -} - -#endif /* PCF_BUILD */ diff --git a/pablo/PabloHDFff.f b/pablo/PabloHDFff.f deleted file mode 100644 index 3b39740..0000000 --- a/pablo/PabloHDFff.f +++ /dev/null @@ -1,62 +0,0 @@ -C * -C * This file is an extension to NCSA HDF to enable the use of the -C * Pablo trace library. -C * -C * Developed by: The TAPESTRY Parallel Computing Laboratory -C * University of Illinois at Urbana-Champaign -C * Department of Computer Science -C * 1304 W. Springfield Avenue -C * Urbana, IL 61801 -C * -C * Copyright (c) 1995 -C * The University of Illinois Board of Trustees. -C * All Rights Reserved. -C * -C * PABLO is a registered trademark of -C * The Board of Trustees of the University of Illinois -C * registered in the U.S. Patent and Trademark Office. -C * -C * Author: Jonathan M. Reid (jreid@cs.uiuc.edu) -C * -C * Project Manager and Principal Investigator: -C * Daniel A. Reed (reed@cs.uiuc.edu) -C * -C * Funded by: National Aeronautics and Space Administration under NASA -C * Contracts NAG-1-613 and USRA 5555-22 and by the Advanced Research -C * Projects Agency under ARPA contracts DAVT63-91-C-0029 and -C * DABT63-93-C-0040. -C * - -C----------------------------------------------------------------------------- -C File: PabloHDFff.f -C Purpose: Fortran stubs for Pablo routines -C Invokes: PabloHDFf.c -C Contents: -C hinitiotrace : Call ihinitiotrace to initialize Pablo tracing -C Remarks: none -C----------------------------------------------------------------------------- - -C----------------------------------------------------------------------------- -C Name: hdfinittrace -C Purpose: call hdfinittracex to initialize tracing -C Inputs: tracefn: Trace file name -C proctmask: -C Returns: 0 on success, FAIL on failure -C Users: -C Invokes: hinittracex -C----------------------------------------------------------------------------- - - subroutine hdfinittracef(tracefn,traceids,nids,out_sw) - - character*(*) tracefn - integer traceids(*), out_sw, nids - character filename(1024) - integer i, length - - length = len(tracefn) - do i = 1, length - filename(i) = tracefn(i:i) - end do - call hinittracex(filename,length,traceids,nids,out_sw) - return - end diff --git a/pablo/PabloSedscr b/pablo/PabloSedscr deleted file mode 100644 index 6df38c2..0000000 --- a/pablo/PabloSedscr +++ /dev/null @@ -1,31 +0,0 @@ -s/,//g -/^[0-9]/,/[A-z]/{ -/^[0-9]/h -/^[0-9]/d -s/$/ = ID_Begin + / -G -s/\n// -s/[A-z]/ parameter ( &/ -s/$/ )/ -h -s/parameter (/integer/ -s/=.*// -G -} -/ALLHDF/,$!d -s/_//g -/integer.*ALLHDF/{ -i\ - integer RuntimeTrace\ - integer SummaryTrace\ - integer MPIRuntimeTrace\ - integer MPISummaryTrace\ - integer NoTrace\ - integer IDBegin \ - parameter (NoTrace = 0)\ - parameter (RuntimeTrace = 1)\ - parameter (SummaryTrace = 2)\ - parameter (MPIRuntimeTrace = 3)\ - parameter (MPISummaryTrace = 4)\ - parameter ( IDBegin = 4 ) -} diff --git a/pablo/ProcIDs.h b/pablo/ProcIDs.h deleted file mode 100644 index 3370037..0000000 --- a/pablo/ProcIDs.h +++ /dev/null @@ -1,165 +0,0 @@ -/* This file is part of the Pablo Performance Analysis Environment -// -// (R) -// The Pablo Performance Analysis Environment software is NOT in -// the public domain. However, it is freely available without fee for -// education, research, and non-profit purposes. By obtaining copies -// of this and other files that comprise the Pablo Performance Analysis -// Environment, you, the Licensee, agree to abide by the following -// conditions and understandings with respect to the copyrighted software: -// -// 1. The software is copyrighted in the name of the Board of Trustees -// of the University of Illinois (UI), and ownership of the software -// remains with the UI. -// -// 2. Permission to use, copy, and modify this software and its documentation -// for education, research, and non-profit purposes is hereby granted -// to Licensee, provided that the copyright notice, the original author's -// names and unit identification, and this permission notice appear on -// all such copies, and that no charge be made for such copies. Any -// entity desiring permission to incorporate this software into commercial -// products should contact: -// -// Professor Daniel A. Reed reed@cs.uiuc.edu -// University of Illinois -// Department of Computer Science -// 2413 Digital Computer Laboratory -// 1304 West Springfield Avenue -// Urbana, Illinois 61801 -// USA -// -// 3. Licensee may not use the name, logo, or any other symbol of the UI -// nor the names of any of its employees nor any adaptation thereof in -// advertizing or publicity pertaining to the software without specific -// prior written approval of the UI. -// -// 4. THE UI MAKES NO REPRESENTATIONS ABOUT THE SUITABILITY OF THE -// SOFTWARE FOR ANY PURPOSE. IT IS PROVIDED "AS IS" WITHOUT EXPRESS -// OR IMPLIED WARRANTY. -// -// 5. The UI shall not be liable for any damages suffered by Licensee from -// the use of this software. -// -// 6. The software was developed under agreements between the UI and the -// Federal Government which entitle the Government to certain rights. -// -// ************************************************************************* -// -// Developed by: The Pablo Research Group -// University of Illinois at Urbana-Champaign -// Department of Computer Science -// 1304 W. Springfield Avenue -// Urbana, IL 61801 -// -// http://www-pablo.cs.uiuc.edu -// -// Send comments to: pablo-feedback@guitar.cs.uiuc.edu -// -// Copyright (c) 1987-1998 -// The University of Illinois Board of Trustees. -// All Rights Reserved. -// -// PABLO is a registered trademark of -// The Board of Trustees of the University of Illinois -// registered in the U.S. Patent and Trademark Office. -// -// Project Manager and Principal Investigator: -// Daniel A. Reed (reed@cs.uiuc.edu) -// -// Funded in part by the Defense Advanced Research Projects Agency under -// DARPA contracts DABT63-94-C0049 (SIO Initiative), F30602-96-C-0161, -// and DABT63-96-C-0027 by the National Science Foundation under the PACI -// program and grants NSF CDA 94-01124 and ASC 97-20202, and by the -// Department of Energy under contracts DOE B-341494, W-7405-ENG-48, and -// 1-B-333164. -//-------------------------------------------------------------------------*/ -/*-------------------------------------------------------------------------- - * File: ProcIDs.h - * Purpose: define IDs for identifying procedures in traces - *-------------------------------------------------------------------------*/ - -#ifndef PROCIDS_H /* avoid re-inclusion */ -#define PROCIDS_H - -extern int *procTrace; -/* - * Define the event IDs that will be used for the various HDF events - */ -#include "ProcTrace.h" - -#include "ProcMasks.h" - -#define ID_HDFprocName 9996 -#define ID_malloc 9997 -#define ID_free 9998 -#define ID_timeStamp 9999 -#define DUMMY_HDF 10000 - -#define BEGIN_HDF (DUMMY_HDF + 1) -#define END_HDF (ID_HDF_Last_Entry + DUMMY_HDF) -#define NumHDFProcs ( ID_HDF_Last_Entry ) - -enum MPIeventIDs { - BEGIN_MPIO = END_HDF+1, - HDFmpiOpenID = BEGIN_MPIO, - HDFmpiCloseID, - HDFmpiDeleteID, - HDFmpiSetSizeID, - HDFmpiPreallocateID, - HDFmpiGetSizeID, - HDFmpiGetGroupID, - HDFmpiGetAmodeID, - HDFmpiGetViewID, - HDFmpiSetViewID, - HDFmpiReadAtID, - HDFmpiReadAtAllID, - HDFmpiWriteAtID, - HDFmpiWriteAtAllID, - HDFmpiReadID, - HDFmpiReadAllID, - HDFmpiWriteID, - HDFmpiWriteAllID, - HDFmpiSeekID, - HDFmpiGetPositionID, - HDFmpiGetByteOffsetID, - HDFmpiGetTypeExtentID, - HDFmpiSetAtomicityID, - HDFmpiGetAtomicityID, - HDFmpiIreadID, - HDFmpiIwriteID, - HDFmpiIreadAtID, - HDFmpiIwriteAtID, - HDFmpiSyncID, - END_MPIO -}; - -/*======================================================================*/ -/* Macros to tell if the ID is that of an HDF Entry or Exit */ -/*======================================================================*/ -#define isBeginHDFEvent( ID ) ( BEGIN_HDF <= (ID) && (ID) <= END_HDF ) -#define isEndHDFEvent( ID ) isBeginHDFEvent(-(ID)) -#define isBeginMPIOEvent( ID ) \ - ( BEGIN_MPIO <= (ID) && (ID) <= END_MPIO ) -#define isEndMPIOEvent( ID ) isBeginMPIOEvent(-(ID)) -#define isBeginIOEvent( ID ) \ - ( IOerrorID < (ID) && (ID) <= fsetposEndID && (ID)%2 == 1 ) -#define isEndIOEvent( ID ) \ - ( IOerrorID < (ID) && (ID) <= fsetposEndID && (ID)%2 == 0 ) -#define ProcIndex( ID ) ( (ID) - BEGIN_HDF ) -#define ProcIndexForHDFEntry( ID ) ( (ID) - BEGIN_HDF ) -#define ProcIndexForHDFExit( ID ) ProcIndexForHDFEntry(-ID) -#define HDFIXtoEventID( ID ) ( (ID) + BEGIN_HDF ) - -#ifdef PCF_BUILD -#define TRACE_ON(mask, ID) \ -if ( procTrace[mask] || procTrace[ID] ) startHDFtraceEvent( ID ) -#define TRACE_OFF(mask, ID ) \ -if ( procTrace[mask] || procTrace[ID] ) endHDFtraceEvent( ID, 0, NULL, 0 ) -#else -#define TRACE_ON(mask, ID) \ -if ( procTrace[mask] || procTrace[ID] ) startHDFtraceEvent( HDFIXtoEventID( ID ) ) -#define TRACE_OFF(mask, ID ) \ -if ( procTrace[mask] || procTrace[ID] ) endHDFtraceEvent(-HDFIXtoEventID(ID), 0, NULL, 0 ) -#endif /* PCF_BUILD */ - -#endif /* PROCIDS_H */ diff --git a/pablo/ProcTrace.h b/pablo/ProcTrace.h deleted file mode 100644 index e9e3d31..0000000 --- a/pablo/ProcTrace.h +++ /dev/null @@ -1,108 +0,0 @@ -/* This file is part of the Pablo Performance Analysis Environment -// -// (R) -// The Pablo Performance Analysis Environment software is NOT in -// the public domain. However, it is freely available without fee for -// education, research, and non-profit purposes. By obtaining copies -// of this and other files that comprise the Pablo Performance Analysis -// Environment, you, the Licensee, agree to abide by the following -// conditions and understandings with respect to the copyrighted software: -// -// 1. The software is copyrighted in the name of the Board of Trustees -// of the University of Illinois (UI), and ownership of the software -// remains with the UI. -// -// 2. Permission to use, copy, and modify this software and its documentation -// for education, research, and non-profit purposes is hereby granted -// to Licensee, provided that the copyright notice, the original author's -// names and unit identification, and this permission notice appear on -// all such copies, and that no charge be made for such copies. Any -// entity desiring permission to incorporate this software into commercial -// products should contact: -// -// Professor Daniel A. Reed reed@cs.uiuc.edu -// University of Illinois -// Department of Computer Science -// 2413 Digital Computer Laboratory -// 1304 West Springfield Avenue -// Urbana, Illinois 61801 -// USA -// -// 3. Licensee may not use the name, logo, or any other symbol of the UI -// nor the names of any of its employees nor any adaptation thereof in -// advertizing or publicity pertaining to the software without specific -// prior written approval of the UI. -// -// 4. THE UI MAKES NO REPRESENTATIONS ABOUT THE SUITABILITY OF THE -// SOFTWARE FOR ANY PURPOSE. IT IS PROVIDED "AS IS" WITHOUT EXPRESS -// OR IMPLIED WARRANTY. -// -// 5. The UI shall not be liable for any damages suffered by Licensee from -// the use of this software. -// -// 6. The software was developed under agreements between the UI and the -// Federal Government which entitle the Government to certain rights. -// -// ************************************************************************* -// -// Developed by: The Pablo Research Group -// University of Illinois at Urbana-Champaign -// Department of Computer Science -// 1304 W. Springfield Avenue -// Urbana, IL 61801 -// -// http://www-pablo.cs.uiuc.edu -// -// Send comments to: pablo-feedback@guitar.cs.uiuc.edu -// -// Copyright (c) 1987-1998 -// The University of Illinois Board of Trustees. -// All Rights Reserved. -// -// PABLO is a registered trademark of -// The Board of Trustees of the University of Illinois -// registered in the U.S. Patent and Trademark Office. -// -// Project Manager and Principal Investigator: -// Daniel A. Reed (reed@cs.uiuc.edu) -// -// Funded in part by the Defense Advanced Research Projects Agency under -// DARPA contracts DABT63-94-C0049 (SIO Initiative), F30602-96-C-0161, -// and DABT63-96-C-0027 by the National Science Foundation under the PACI -// program and grants NSF CDA 94-01124 and ASC 97-20202, and by the -// Department of Energy under contracts DOE B-341494, W-7405-ENG-48, and -// 1-B-333164. -//-------------------------------------------------------------------------*/ -/*-------------------------------------------------------------------------- - * File: ProcTrace.h - * Purpose: define entities for tracing HDF procedures - *-------------------------------------------------------------------------*/ - -#ifndef PROCTRACE_H /* avoid re-inclusion */ -#define PROCTRACE_H -#include <stdarg.h> -/*======================================================================*/ -/* Assign HDF identifier routine tags */ -/*======================================================================*/ -#ifdef RUNTIME_TRACE -#undef RUNTIME_TRACE -#endif -enum HDF_IDS { -NO_TRACE = 0, -RUNTIME_TRACE = 1, -SUMMARY_TRACE, -MPI_RUNTIME_TRACE, -MPI_SUMMARY_TRACE, -DETAILED=RUNTIME_TRACE, -LAST_TRACE_TYPE=MPI_SUMMARY_TRACE, -#include "HDFidList.h" -NUM_HDF_IDS -} ; - -#define SUPPRESS_MPIO_TRACE 6 -#define ID_HDF_Last_Entry ID_ALLHDF - -void HDFinitTrace( const char *, int procNum, int trace_id, ... ); -void HDFendTrace( void ); -void setHDFcallLevel( int ); -#endif /* PROCTRACE_H */ diff --git a/pablo/READ_ME b/pablo/READ_ME deleted file mode 100644 index bebf43c..0000000 --- a/pablo/READ_ME +++ /dev/null @@ -1,18 +0,0 @@ -To build the Pablo Instrumented version of the HDF 5 library - -1) Configure the system as normal from the parent directory - -2) Make the normal HDF 5 library - -3) set the environment variable PABLO_TRACELIB to the path of the directory - continaining the Pablo TraceLibrary. This directory should contain the - lib and include directories as subdirectories - -4) If building to instrument MPI programs, uncomment the line beginning - PABLO_MPI_FLAGS. In this case, the Pablo TraceLibrary should be built - to trace the MPI-I/O calls. - -5) If you are going to link with the Pablo TraceLibraries, issue the - make or make install commands - If you are going to link with the Pablo PCF, issue one of the commands - make PABLO_BLD=PCF or make PABLO_BLD=PCF install |