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author | Allen Byrne <byrn@hdfgroup.org> | 2009-06-12 13:30:16 (GMT) |
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committer | Allen Byrne <byrn@hdfgroup.org> | 2009-06-12 13:30:16 (GMT) |
commit | fae180790e197f6bc72eb2d0273edc6481768bc4 (patch) | |
tree | 6e0efb2ba11da8f744b2787547366da1d8690155 /perform | |
parent | 170b1f6755152bc91b9fc56150cd8810338556cc (diff) | |
download | hdf5-fae180790e197f6bc72eb2d0273edc6481768bc4.zip hdf5-fae180790e197f6bc72eb2d0273edc6481768bc4.tar.gz hdf5-fae180790e197f6bc72eb2d0273edc6481768bc4.tar.bz2 |
[svn-r17042] Updated perf_serial test to work on windows. Bring back from trunk.
Tested:
Windows
Diffstat (limited to 'perform')
31 files changed, 2383 insertions, 229 deletions
diff --git a/perform/Makefile b/perform/Makefile new file mode 100644 index 0000000..bc0f5d3 --- /dev/null +++ b/perform/Makefile @@ -0,0 +1,966 @@ +# Makefile.in generated by automake 1.10.2 from Makefile.am. +# perform/Makefile. Generated from Makefile.in by configure. + +# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002, +# 2003, 2004, 2005, 2006, 2007, 2008 Free Software Foundation, Inc. +# This Makefile.in is free software; the Free Software Foundation +# gives unlimited permission to copy and/or distribute it, +# with or without modifications, as long as this notice is preserved. + +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY, to the extent permitted by law; without +# even the implied warranty of MERCHANTABILITY or FITNESS FOR A +# PARTICULAR PURPOSE. + + + +# +# Copyright by The HDF Group. +# Copyright by the Board of Trustees of the University of Illinois. +# All rights reserved. +# +# This file is part of HDF5. The full HDF5 copyright notice, including +# terms governing use, modification, and redistribution, is contained in +# the files COPYING and Copyright.html. COPYING can be found at the root +# of the source code distribution tree; Copyright.html can be found at the +# root level of an installed copy of the electronic HDF5 document set and +# is linked from the top-level documents page. It can also be found at +# http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have +# access to either file, you may request a copy from help@hdfgroup.org. +# +# HDF5 Library Performance Makefile(.in) +# + + +pkgdatadir = $(datadir)/hdf5 +pkglibdir = $(libdir)/hdf5 +pkgincludedir = $(includedir)/hdf5 +am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd +install_sh_DATA = $(install_sh) -c -m 644 +install_sh_PROGRAM = $(install_sh) -c +install_sh_SCRIPT = $(install_sh) -c +INSTALL_HEADER = $(INSTALL_DATA) +transform = $(program_transform_name) +NORMAL_INSTALL = : +PRE_INSTALL = : +POST_INSTALL = : +NORMAL_UNINSTALL = : +PRE_UNINSTALL = : +POST_UNINSTALL = : +build_triplet = x86_64-unknown-linux-gnu +host_triplet = x86_64-unknown-linux-gnu +DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \ + $(top_srcdir)/config/commence.am \ + $(top_srcdir)/config/conclude.am COPYING +bin_PROGRAMS = \ + h5perf_serial$(EXEEXT) +#bin_PROGRAMS = h5perf$(EXEEXT) +check_PROGRAMS = $(am__EXEEXT_1) $(am__EXEEXT_4) +TESTS = $(check_PROGRAMS) +subdir = perform +ACLOCAL_M4 = $(top_srcdir)/aclocal.m4 +am__aclocal_m4_deps = $(top_srcdir)/configure.in +am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \ + $(ACLOCAL_M4) +mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs +CONFIG_HEADER = $(top_builddir)/src/H5config.h +CONFIG_CLEAN_FILES = +am__installdirs = "$(DESTDIR)$(bindir)" +binPROGRAMS_INSTALL = $(INSTALL_PROGRAM) +#am__EXEEXT_1 = h5perf$(EXEEXT) \ +# perf$(EXEEXT) +#am__EXEEXT_2 = benchpar$(EXEEXT) \ +# mpi-perf$(EXEEXT) +#am__EXEEXT_3 = $(am__EXEEXT_2) +am__EXEEXT_4 = iopipe$(EXEEXT) chunk$(EXEEXT) overhead$(EXEEXT) \ + zip_perf$(EXEEXT) perf_meta$(EXEEXT) h5perf_serial$(EXEEXT) \ + $(am__EXEEXT_3) +PROGRAMS = $(bin_PROGRAMS) +benchpar_SOURCES = benchpar.c +benchpar_OBJECTS = benchpar.$(OBJEXT) +benchpar_LDADD = $(LDADD) +benchpar_DEPENDENCIES = $(LIBHDF5) +chunk_SOURCES = chunk.c +chunk_OBJECTS = chunk.$(OBJEXT) +chunk_LDADD = $(LDADD) +chunk_DEPENDENCIES = $(LIBHDF5) +am_h5perf_OBJECTS = pio_perf.$(OBJEXT) pio_engine.$(OBJEXT) \ + pio_timer.$(OBJEXT) +h5perf_OBJECTS = $(am_h5perf_OBJECTS) +h5perf_DEPENDENCIES = $(LIBH5TOOLS) $(LIBH5TEST) $(LIBHDF5) +am_h5perf_serial_OBJECTS = sio_perf.$(OBJEXT) sio_engine.$(OBJEXT) \ + sio_timer.$(OBJEXT) +h5perf_serial_OBJECTS = $(am_h5perf_serial_OBJECTS) +h5perf_serial_DEPENDENCIES = $(LIBH5TOOLS) $(LIBH5TEST) $(LIBHDF5) +iopipe_SOURCES = iopipe.c +iopipe_OBJECTS = iopipe.$(OBJEXT) +iopipe_DEPENDENCIES = $(LIBH5TEST) $(LIBHDF5) +mpi_perf_SOURCES = mpi-perf.c +mpi_perf_OBJECTS = mpi-perf.$(OBJEXT) +mpi_perf_LDADD = $(LDADD) +mpi_perf_DEPENDENCIES = $(LIBHDF5) +overhead_SOURCES = overhead.c +overhead_OBJECTS = overhead.$(OBJEXT) +overhead_LDADD = $(LDADD) +overhead_DEPENDENCIES = $(LIBHDF5) +perf_SOURCES = perf.c +perf_OBJECTS = perf.$(OBJEXT) +perf_DEPENDENCIES = $(LIBH5TEST) $(LIBHDF5) +perf_meta_SOURCES = perf_meta.c +perf_meta_OBJECTS = perf_meta.$(OBJEXT) +perf_meta_DEPENDENCIES = $(LIBH5TEST) $(LIBHDF5) +zip_perf_SOURCES = zip_perf.c +zip_perf_OBJECTS = zip_perf.$(OBJEXT) +zip_perf_DEPENDENCIES = $(LIBH5TOOLS) $(LIBH5TEST) $(LIBHDF5) +DEFAULT_INCLUDES = -I. -I$(top_builddir)/src +depcomp = $(SHELL) $(top_srcdir)/bin/depcomp +am__depfiles_maybe = depfiles +COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \ + $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) +LTCOMPILE = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \ + --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) \ + $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) +CCLD = $(CC) +LINK = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \ + --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) $(AM_LDFLAGS) \ + $(LDFLAGS) -o $@ +SOURCES = benchpar.c chunk.c $(h5perf_SOURCES) \ + $(h5perf_serial_SOURCES) iopipe.c mpi-perf.c overhead.c perf.c \ + perf_meta.c zip_perf.c +DIST_SOURCES = benchpar.c chunk.c $(h5perf_SOURCES) \ + $(h5perf_serial_SOURCES) iopipe.c mpi-perf.c overhead.c perf.c \ + perf_meta.c zip_perf.c +ETAGS = etags 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List them in the order they should be run. +TEST_PROG = iopipe chunk overhead zip_perf perf_meta h5perf_serial $(BUILD_ALL_PROGS) +h5perf_SOURCES = pio_perf.c pio_engine.c pio_timer.c +h5perf_serial_SOURCES = sio_perf.c sio_engine.c sio_timer.c + +# These are the files that `make clean' (and derivatives) will remove from +# this directory. +CLEANFILES = *.h5 *.raw *.dat x-gnuplot perftest.out + +# All of the programs depend on the main hdf5 library, and some of them +# depend on test or tools library. +LDADD = $(LIBHDF5) +h5perf_LDADD = $(LIBH5TOOLS) $(LIBH5TEST) $(LIBHDF5) +h5perf_serial_LDADD = $(LIBH5TOOLS) $(LIBH5TEST) $(LIBHDF5) +perf_LDADD = $(LIBH5TEST) $(LIBHDF5) +iopipe_LDADD = $(LIBH5TEST) $(LIBHDF5) +zip_perf_LDADD = $(LIBH5TOOLS) $(LIBH5TEST) $(LIBHDF5) +perf_meta_LDADD = $(LIBH5TEST) $(LIBHDF5) + +# Automake needs to be taught how to build lib, progs, and tests targets. +# These will be filled in automatically for the most part (e.g., +# lib_LIBRARIES are built for lib target), but EXTRA_LIB, EXTRA_PROG, and +# EXTRA_TEST variables are supplied to allow the user to force targets to +# be built at certain times. +LIB = $(lib_LIBRARIES) $(lib_LTLIBRARIES) $(noinst_LIBRARIES) \ + $(noinst_LTLIBRARIES) $(check_LIBRARIES) $(check_LTLIBRARIES) $(EXTRA_LIB) + +PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS) \ + $(EXTRA_PROG) + +TEST_PROG_CHKEXE = $(TEST_PROG:=.chkexe_) +TEST_PROG_PARA_CHKEXE = $(TEST_PROG_PARA:=.chkexe_) +TEST_SCRIPT_CHKSH = $(TEST_SCRIPT:=.chkexe_) +TEST_SCRIPT_PARA_CHKSH = $(TEST_SCRIPT_PARA:=.chkexe_) +all: all-am + +.SUFFIXES: +.SUFFIXES: .c .lo .o .obj +$(srcdir)/Makefile.in: # $(srcdir)/Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(am__configure_deps) + @for dep in $?; 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E.g.,"; \ + echo " HDF5_PARAPREFIX=/PFS/user/me"; \ + echo " export HDF5_PARAPREFIX"; \ + echo " make check"; \ + echo "**** end of Hint ****"; \ + fi + @for test in $(TEST_PROG_PARA) dummy; do \ + if test $$test != dummy; then \ + $(MAKE) $(AM_MAKEFLAGS) $$test.chkexe_ \ + RUNTESTS="$(RUNPARALLEL)" || exit 1; \ + fi; \ + done + @for test in $(TEST_SCRIPT_PARA) dummy; do \ + if test $$test != dummy; then \ + $(MAKE) $(AM_MAKEFLAGS) $$test.chkexe_ || exit 1; \ + fi; \ + done + @if test -n "$(TEST_PROG_PARA)$(TEST_SCRIPT_PARA)"; then \ + echo "===Parallel tests in `echo ${PWD} | sed -e s:.*/::` ended `date`===";\ + fi + +# Run test with different Virtual File Driver +check-vfd: $(LIB) $(PROGS) $(TESTS) + @for vfd in $(VFD_LIST) dummy; do \ + if test $$vfd != dummy; then \ + echo "============================"; \ + echo "Testing Virtual File Driver $$vfd"; \ + echo "============================"; \ + $(MAKE) $(AM_MAKEFLAGS) check-clean || exit 1; \ + HDF5_DRIVER=$$vfd $(MAKE) $(AM_MAKEFLAGS) check || exit 1; \ + fi; \ + done +# Tell versions [3.59,3.63) of GNU make to not export all variables. +# Otherwise a system limit (for SysV at least) may be exceeded. +.NOEXPORT: diff --git a/perform/chunk b/perform/chunk new file mode 100644 index 0000000..e605d08 --- /dev/null +++ b/perform/chunk @@ -0,0 +1,148 @@ +#! /bin/sh + +# chunk - temporary wrapper script for .libs/chunk +# Generated by ltmain.sh (GNU libtool) 2.2.6 +# +# The chunk program cannot be directly executed until all the libtool +# libraries that it depends on are installed. +# +# This wrapper script should never be moved out of the build directory. +# If it is, it will not operate correctly. + +# Sed substitution that helps us do robust quoting. It backslashifies +# metacharacters that are still active within double-quoted strings. +Xsed='/bin/sed -e 1s/^X//' +sed_quote_subst='s/\([`"$\\]\)/\\\1/g' + +# Be Bourne compatible +if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then + emulate sh + NULLCMD=: + # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which + # is contrary to our usage. Disable this feature. + alias -g '${1+"$@"}'='"$@"' + setopt NO_GLOB_SUBST +else + case `(set -o) 2>/dev/null` in *posix*) set -o posix;; esac +fi +BIN_SH=xpg4; export BIN_SH # for Tru64 +DUALCASE=1; export DUALCASE # for MKS sh + +# The HP-UX ksh and POSIX shell print the target directory to stdout +# if CDPATH is set. +(unset CDPATH) >/dev/null 2>&1 && unset CDPATH + +relink_command="(cd /home/abyrne/HDF_Projects/HDF5-C-1.8/perform; { test -z \"\${LD_RUN_PATH+set}\" || unset LD_RUN_PATH || { LD_RUN_PATH=; export LD_RUN_PATH; }; }; { test -z \"\${LD_LIBRARY_PATH+set}\" || unset LD_LIBRARY_PATH || { LD_LIBRARY_PATH=; export LD_LIBRARY_PATH; }; }; PATH=/usr/lib64/qt-3.3/bin:/usr/kerberos/bin:/usr/lib64/ccache:/usr/local/bin:/usr/bin:/bin:/usr/games:/usr/local/sbin:/usr/sbin:/sbin:/home/abyrne/bin; export PATH; gcc -fPIC -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wvolatile-register-var -Wstrict-overflow -Wlogical-op -Wvla -O0 -fomit-frame-pointer -finline-functions -o \$progdir/\$file chunk.o -L/home/abyrne/HDF_Projects/SZIP/szip/lib ../src/.libs/libhdf5.so /home/abyrne/HDF_Projects/SZIP/szip/lib/libsz.a -lz -lm -Wl,-rpath -Wl,/home/abyrne/HDF_Projects/HDF5-C-1.8/src/.libs -Wl,-rpath -Wl,/home/abyrne/HDF_Projects/HDF5-C-1.8/hdf5/lib)" + +# This environment variable determines our operation mode. +if test "$libtool_install_magic" = "%%%MAGIC variable%%%"; then + # install mode needs the following variables: + generated_by_libtool_version='2.2.6' + notinst_deplibs=' ../src/libhdf5.la' +else + # When we are sourced in execute mode, $file and $ECHO are already set. + if test "$libtool_execute_magic" != "%%%MAGIC variable%%%"; then + ECHO="echo" + file="$0" + # Make sure echo works. + if test "X$1" = X--no-reexec; then + # Discard the --no-reexec flag, and continue. + shift + elif test "X`{ $ECHO '\t'; } 2>/dev/null`" = 'X\t'; then + # Yippee, $ECHO works! + : + else + # Restart under the correct shell, and then maybe $ECHO will work. + exec /bin/sh "$0" --no-reexec ${1+"$@"} + fi + fi + + # Find the directory that this script lives in. + thisdir=`$ECHO "X$file" | $Xsed -e 's%/[^/]*$%%'` + test "x$thisdir" = "x$file" && thisdir=. + + # Follow symbolic links until we get to the real thisdir. + file=`ls -ld "$file" | /bin/sed -n 's/.*-> //p'` + while test -n "$file"; do + destdir=`$ECHO "X$file" | $Xsed -e 's%/[^/]*$%%'` + + # If there was a directory component, then change thisdir. + if test "x$destdir" != "x$file"; then + case "$destdir" in + [\\/]* | [A-Za-z]:[\\/]*) thisdir="$destdir" ;; + *) thisdir="$thisdir/$destdir" ;; + esac + fi + + file=`$ECHO "X$file" | $Xsed -e 's%^.*/%%'` + file=`ls -ld "$thisdir/$file" | /bin/sed -n 's/.*-> //p'` + done + + + # Usually 'no', except on cygwin/mingw when embedded into + # the cwrapper. + WRAPPER_SCRIPT_BELONGS_IN_OBJDIR=no + if test "$WRAPPER_SCRIPT_BELONGS_IN_OBJDIR" = "yes"; then + # special case for '.' + if test "$thisdir" = "."; then + thisdir=`pwd` + fi + # remove .libs from thisdir + case "$thisdir" in + *[\\/].libs ) thisdir=`$ECHO "X$thisdir" | $Xsed -e 's%[\\/][^\\/]*$%%'` ;; + .libs ) thisdir=. ;; + esac + fi + + # Try to get the absolute directory name. + absdir=`cd "$thisdir" && pwd` + test -n "$absdir" && thisdir="$absdir" + + program=lt-'chunk' + progdir="$thisdir/.libs" + + if test ! -f "$progdir/$program" || + { file=`ls -1dt "$progdir/$program" "$progdir/../$program" 2>/dev/null | /bin/sed 1q`; \ + test "X$file" != "X$progdir/$program"; }; then + + file="$$-$program" + + if test ! -d "$progdir"; then + mkdir "$progdir" + else + rm -f "$progdir/$file" + fi + + # relink executable if necessary + if test -n "$relink_command"; then + if relink_command_output=`eval $relink_command 2>&1`; then : + else + echo "$relink_command_output" >&2 + rm -f "$progdir/$file" + exit 1 + fi + fi + + mv -f "$progdir/$file" "$progdir/$program" 2>/dev/null || + { rm -f "$progdir/$program"; + mv -f "$progdir/$file" "$progdir/$program"; } + rm -f "$progdir/$file" + fi + + if test -f "$progdir/$program"; then + if test "$libtool_execute_magic" != "%%%MAGIC variable%%%"; then + # Run the actual program with our arguments. + + exec "$progdir/$program" ${1+"$@"} + + $ECHO "$0: cannot exec $program $*" 1>&2 + exit 1 + fi + else + # The program doesn't exist. + $ECHO "$0: error: \`$progdir/$program' does not exist" 1>&2 + $ECHO "This script is just a wrapper for $program." 1>&2 + echo "See the libtool documentation for more information." 1>&2 + exit 1 + fi +fi diff --git a/perform/chunk.chkexe b/perform/chunk.chkexe new file mode 100644 index 0000000..e69de29 --- /dev/null +++ b/perform/chunk.chkexe diff --git a/perform/chunk.chklog b/perform/chunk.chklog new file mode 100644 index 0000000..875bc00 --- /dev/null +++ b/perform/chunk.chklog @@ -0,0 +1,50 @@ +============================ + chunk Test Log +============================ +Test CacheSz ChunkSz Effic +--------- -------- -------- -------- +Rowmaj-rd 25 0.50 1.00 +Rowmaj-rd 25 1.00 1.00 +Rowmaj-rd 25 1.50 0.75 +Rowmaj-rd 25 2.00 1.00 +Rowmaj-rd 25 2.50 0.83 +Rowmaj-rd 25 3.00 1.00 +Rowmaj-rd 25 3.50 0.87 +Rowmaj-rd 25 4.00 1.00 +Rowmaj-rd 25 4.50 0.91 +Rowmaj-rd 25 5.00 1.00 +Rowmaj-wr 25 0.50 0.50 +Rowmaj-wr 25 1.00 1.00 +Rowmaj-wr 25 1.50 0.45 +Rowmaj-wr 25 2.00 1.00 +Rowmaj-wr 25 2.50 0.57 +Rowmaj-wr 25 3.00 1.00 +Rowmaj-wr 25 3.50 0.63 +Rowmaj-wr 25 4.00 1.00 +Rowmaj-wr 25 4.50 0.72 +Rowmaj-wr 25 5.00 1.00 +Diag-rd 25 0.50 0.26 +Diag-rd 25 1.00 0.51 +Diag-rd 25 1.50 0.62 +Diag-rd 25 2.00 1.00 +Diag-rd 25 2.50 0.72 +Diag-rd 25 3.00 0.80 +Diag-rd 25 3.50 0.78 +Diag-rd 25 4.00 1.00 +Diag-rd 25 4.50 0.84 +Diag-rd 25 5.00 0.89 +Diag-wr 25 0.50 0.13 +Diag-wr 25 1.00 0.26 +Diag-wr 25 1.50 0.31 +Diag-wr 25 2.00 1.00 +Diag-wr 25 2.50 0.41 +Diag-wr 25 3.00 0.53 +Diag-wr 25 3.50 0.49 +Diag-wr 25 4.00 1.00 +Diag-wr 25 4.50 0.58 +Diag-wr 25 5.00 0.69 +0.31user 0.12system 0:00.46elapsed 92%CPU (0avgtext+0avgdata 0maxresident)k +16inputs+7952outputs (0major+9524minor)pagefaults 0swaps + +Finished testing chunk +============================ diff --git a/perform/chunk.h5 b/perform/chunk.h5 Binary files differnew file mode 100644 index 0000000..26ed19f --- /dev/null +++ b/perform/chunk.h5 diff --git a/perform/h5perf_serial b/perform/h5perf_serial new file mode 100644 index 0000000..06329d0 --- /dev/null +++ b/perform/h5perf_serial @@ -0,0 +1,148 @@ +#! /bin/sh + +# h5perf_serial - temporary wrapper script for .libs/h5perf_serial +# Generated by ltmain.sh (GNU libtool) 2.2.6 +# +# The h5perf_serial program cannot be directly executed until all the libtool +# libraries that it depends on are installed. +# +# This wrapper script should never be moved out of the build directory. +# If it is, it will not operate correctly. + +# Sed substitution that helps us do robust quoting. It backslashifies +# metacharacters that are still active within double-quoted strings. +Xsed='/bin/sed -e 1s/^X//' +sed_quote_subst='s/\([`"$\\]\)/\\\1/g' + +# Be Bourne compatible +if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then + emulate sh + NULLCMD=: + # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which + # is contrary to our usage. Disable this feature. + alias -g '${1+"$@"}'='"$@"' + setopt NO_GLOB_SUBST +else + case `(set -o) 2>/dev/null` in *posix*) set -o posix;; esac +fi +BIN_SH=xpg4; export BIN_SH # for Tru64 +DUALCASE=1; export DUALCASE # for MKS sh + +# The HP-UX ksh and POSIX shell print the target directory to stdout +# if CDPATH is set. +(unset CDPATH) >/dev/null 2>&1 && unset CDPATH + +relink_command="(cd /home/abyrne/HDF_Projects/HDF5-C-1.8/perform; { test -z \"\${LD_RUN_PATH+set}\" || unset LD_RUN_PATH || { LD_RUN_PATH=; export LD_RUN_PATH; }; }; { test -z \"\${LD_LIBRARY_PATH+set}\" || unset LD_LIBRARY_PATH || { LD_LIBRARY_PATH=; export LD_LIBRARY_PATH; }; }; PATH=/usr/lib64/qt-3.3/bin:/usr/kerberos/bin:/usr/lib64/ccache:/usr/local/bin:/usr/bin:/bin:/usr/games:/usr/local/sbin:/usr/sbin:/sbin:/home/abyrne/bin; export PATH; gcc -fPIC -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wvolatile-register-var -Wstrict-overflow -Wlogical-op -Wvla -O0 -fomit-frame-pointer -finline-functions -o \$progdir/\$file sio_perf.o sio_engine.o sio_timer.o -L/home/abyrne/HDF_Projects/SZIP/szip/lib ../tools/lib/.libs/libh5tools.a ../test/.libs/libh5test.a ../src/.libs/libhdf5.so /home/abyrne/HDF_Projects/SZIP/szip/lib/libsz.a -lz -lm -Wl,-rpath -Wl,/home/abyrne/HDF_Projects/HDF5-C-1.8/src/.libs -Wl,-rpath -Wl,/home/abyrne/HDF_Projects/HDF5-C-1.8/hdf5/lib)" + +# This environment variable determines our operation mode. +if test "$libtool_install_magic" = "%%%MAGIC variable%%%"; then + # install mode needs the following variables: + generated_by_libtool_version='2.2.6' + notinst_deplibs=' ../src/libhdf5.la' +else + # When we are sourced in execute mode, $file and $ECHO are already set. + if test "$libtool_execute_magic" != "%%%MAGIC variable%%%"; then + ECHO="echo" + file="$0" + # Make sure echo works. + if test "X$1" = X--no-reexec; then + # Discard the --no-reexec flag, and continue. + shift + elif test "X`{ $ECHO '\t'; } 2>/dev/null`" = 'X\t'; then + # Yippee, $ECHO works! + : + else + # Restart under the correct shell, and then maybe $ECHO will work. + exec /bin/sh "$0" --no-reexec ${1+"$@"} + fi + fi + + # Find the directory that this script lives in. + thisdir=`$ECHO "X$file" | $Xsed -e 's%/[^/]*$%%'` + test "x$thisdir" = "x$file" && thisdir=. + + # Follow symbolic links until we get to the real thisdir. + file=`ls -ld "$file" | /bin/sed -n 's/.*-> //p'` + while test -n "$file"; do + destdir=`$ECHO "X$file" | $Xsed -e 's%/[^/]*$%%'` + + # If there was a directory component, then change thisdir. + if test "x$destdir" != "x$file"; then + case "$destdir" in + [\\/]* | [A-Za-z]:[\\/]*) thisdir="$destdir" ;; + *) thisdir="$thisdir/$destdir" ;; + esac + fi + + file=`$ECHO "X$file" | $Xsed -e 's%^.*/%%'` + file=`ls -ld "$thisdir/$file" | /bin/sed -n 's/.*-> //p'` + done + + + # Usually 'no', except on cygwin/mingw when embedded into + # the cwrapper. + WRAPPER_SCRIPT_BELONGS_IN_OBJDIR=no + if test "$WRAPPER_SCRIPT_BELONGS_IN_OBJDIR" = "yes"; then + # special case for '.' + if test "$thisdir" = "."; then + thisdir=`pwd` + fi + # remove .libs from thisdir + case "$thisdir" in + *[\\/].libs ) thisdir=`$ECHO "X$thisdir" | $Xsed -e 's%[\\/][^\\/]*$%%'` ;; + .libs ) thisdir=. ;; + esac + fi + + # Try to get the absolute directory name. + absdir=`cd "$thisdir" && pwd` + test -n "$absdir" && thisdir="$absdir" + + program=lt-'h5perf_serial' + progdir="$thisdir/.libs" + + if test ! -f "$progdir/$program" || + { file=`ls -1dt "$progdir/$program" "$progdir/../$program" 2>/dev/null | /bin/sed 1q`; \ + test "X$file" != "X$progdir/$program"; }; then + + file="$$-$program" + + if test ! -d "$progdir"; then + mkdir "$progdir" + else + rm -f "$progdir/$file" + fi + + # relink executable if necessary + if test -n "$relink_command"; then + if relink_command_output=`eval $relink_command 2>&1`; then : + else + echo "$relink_command_output" >&2 + rm -f "$progdir/$file" + exit 1 + fi + fi + + mv -f "$progdir/$file" "$progdir/$program" 2>/dev/null || + { rm -f "$progdir/$program"; + mv -f "$progdir/$file" "$progdir/$program"; } + rm -f "$progdir/$file" + fi + + if test -f "$progdir/$program"; then + if test "$libtool_execute_magic" != "%%%MAGIC variable%%%"; then + # Run the actual program with our arguments. + + exec "$progdir/$program" ${1+"$@"} + + $ECHO "$0: cannot exec $program $*" 1>&2 + exit 1 + fi + else + # The program doesn't exist. + $ECHO "$0: error: \`$progdir/$program' does not exist" 1>&2 + $ECHO "This script is just a wrapper for $program." 1>&2 + echo "See the libtool documentation for more information." 1>&2 + exit 1 + fi +fi diff --git a/perform/h5perf_serial.chkexe b/perform/h5perf_serial.chkexe new file mode 100644 index 0000000..e69de29 --- /dev/null +++ b/perform/h5perf_serial.chkexe diff --git a/perform/h5perf_serial.chklog b/perform/h5perf_serial.chklog new file mode 100644 index 0000000..d1bef16 --- /dev/null +++ b/perform/h5perf_serial.chklog @@ -0,0 +1,56 @@ +============================ + h5perf_serial Test Log +============================ +HDF5 Library: Version 1.8.2-post13 +==== Parameters ==== +IO API=posix hdf5 +Number of iterations=1 +Dataset size=100 200 +Transfer buffer size=10 20 +Dimension access order=1 2 +HDF5 data storage method=Contiguous +HDF5 file driver=sec2 +Env HDF5_PREFIX=not set +==== End of Parameters ==== + +Transfer Buffer Size (bytes): 200 +File Size(MB): 0.02 + IO API = POSIX + Write (1 iteration(s)): + Maximum Throughput: 7.20 MB/s + Average Throughput: 7.20 MB/s + Minimum Throughput: 7.20 MB/s + Write Open-Close (1 iteration(s)): + Maximum Throughput: 7.09 MB/s + Average Throughput: 7.09 MB/s + Minimum Throughput: 7.09 MB/s + Read (1 iteration(s)): + Maximum Throughput: 18.81 MB/s + Average Throughput: 18.81 MB/s + Minimum Throughput: 18.81 MB/s + Read Open-Close (1 iteration(s)): + Maximum Throughput: 18.68 MB/s + Average Throughput: 18.68 MB/s + Minimum Throughput: 18.68 MB/s + IO API = HDF5 + Write (1 iteration(s)): + Maximum Throughput: 18.13 MB/s + Average Throughput: 18.13 MB/s + Minimum Throughput: 18.13 MB/s + Write Open-Close (1 iteration(s)): + Maximum Throughput: 5.67 MB/s + Average Throughput: 5.67 MB/s + Minimum Throughput: 5.67 MB/s + Read (1 iteration(s)): + Maximum Throughput: 30.72 MB/s + Average Throughput: 30.72 MB/s + Minimum Throughput: 30.72 MB/s + Read Open-Close (1 iteration(s)): + Maximum Throughput: 13.86 MB/s + Average Throughput: 13.86 MB/s + Minimum Throughput: 13.86 MB/s +0.03user 0.01system 0:00.10elapsed 50%CPU (0avgtext+0avgdata 0maxresident)k +88inputs+232outputs (0major+7732minor)pagefaults 0swaps + +Finished testing h5perf_serial +============================ diff --git a/perform/iopipe b/perform/iopipe new file mode 100644 index 0000000..c596b24 --- /dev/null +++ b/perform/iopipe @@ -0,0 +1,148 @@ +#! /bin/sh + +# iopipe - temporary wrapper script for .libs/iopipe +# Generated by ltmain.sh (GNU libtool) 2.2.6 +# +# The iopipe program cannot be directly executed until all the libtool +# libraries that it depends on are installed. +# +# This wrapper script should never be moved out of the build directory. +# If it is, it will not operate correctly. + +# Sed substitution that helps us do robust quoting. It backslashifies +# metacharacters that are still active within double-quoted strings. +Xsed='/bin/sed -e 1s/^X//' +sed_quote_subst='s/\([`"$\\]\)/\\\1/g' + +# Be Bourne compatible +if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then + emulate sh + NULLCMD=: + # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which + # is contrary to our usage. Disable this feature. + alias -g '${1+"$@"}'='"$@"' + setopt NO_GLOB_SUBST +else + case `(set -o) 2>/dev/null` in *posix*) set -o posix;; esac +fi +BIN_SH=xpg4; export BIN_SH # for Tru64 +DUALCASE=1; export DUALCASE # for MKS sh + +# The HP-UX ksh and POSIX shell print the target directory to stdout +# if CDPATH is set. +(unset CDPATH) >/dev/null 2>&1 && unset CDPATH + +relink_command="(cd /home/abyrne/HDF_Projects/HDF5-C-1.8/perform; { test -z \"\${LD_RUN_PATH+set}\" || unset LD_RUN_PATH || { LD_RUN_PATH=; export LD_RUN_PATH; }; }; { test -z \"\${LD_LIBRARY_PATH+set}\" || unset LD_LIBRARY_PATH || { LD_LIBRARY_PATH=; export LD_LIBRARY_PATH; }; }; PATH=/usr/lib64/qt-3.3/bin:/usr/kerberos/bin:/usr/lib64/ccache:/usr/local/bin:/usr/bin:/bin:/usr/games:/usr/local/sbin:/usr/sbin:/sbin:/home/abyrne/bin; export PATH; gcc -fPIC -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wvolatile-register-var -Wstrict-overflow -Wlogical-op -Wvla -O0 -fomit-frame-pointer -finline-functions -o \$progdir/\$file iopipe.o -L/home/abyrne/HDF_Projects/SZIP/szip/lib ../test/.libs/libh5test.a ../src/.libs/libhdf5.so /home/abyrne/HDF_Projects/SZIP/szip/lib/libsz.a -lz -lm -Wl,-rpath -Wl,/home/abyrne/HDF_Projects/HDF5-C-1.8/src/.libs -Wl,-rpath -Wl,/home/abyrne/HDF_Projects/HDF5-C-1.8/hdf5/lib)" + +# This environment variable determines our operation mode. +if test "$libtool_install_magic" = "%%%MAGIC variable%%%"; then + # install mode needs the following variables: + generated_by_libtool_version='2.2.6' + notinst_deplibs=' ../src/libhdf5.la' +else + # When we are sourced in execute mode, $file and $ECHO are already set. + if test "$libtool_execute_magic" != "%%%MAGIC variable%%%"; then + ECHO="echo" + file="$0" + # Make sure echo works. + if test "X$1" = X--no-reexec; then + # Discard the --no-reexec flag, and continue. + shift + elif test "X`{ $ECHO '\t'; } 2>/dev/null`" = 'X\t'; then + # Yippee, $ECHO works! + : + else + # Restart under the correct shell, and then maybe $ECHO will work. + exec /bin/sh "$0" --no-reexec ${1+"$@"} + fi + fi + + # Find the directory that this script lives in. + thisdir=`$ECHO "X$file" | $Xsed -e 's%/[^/]*$%%'` + test "x$thisdir" = "x$file" && thisdir=. + + # Follow symbolic links until we get to the real thisdir. + file=`ls -ld "$file" | /bin/sed -n 's/.*-> //p'` + while test -n "$file"; do + destdir=`$ECHO "X$file" | $Xsed -e 's%/[^/]*$%%'` + + # If there was a directory component, then change thisdir. + if test "x$destdir" != "x$file"; then + case "$destdir" in + [\\/]* | [A-Za-z]:[\\/]*) thisdir="$destdir" ;; + *) thisdir="$thisdir/$destdir" ;; + esac + fi + + file=`$ECHO "X$file" | $Xsed -e 's%^.*/%%'` + file=`ls -ld "$thisdir/$file" | /bin/sed -n 's/.*-> //p'` + done + + + # Usually 'no', except on cygwin/mingw when embedded into + # the cwrapper. + WRAPPER_SCRIPT_BELONGS_IN_OBJDIR=no + if test "$WRAPPER_SCRIPT_BELONGS_IN_OBJDIR" = "yes"; then + # special case for '.' + if test "$thisdir" = "."; then + thisdir=`pwd` + fi + # remove .libs from thisdir + case "$thisdir" in + *[\\/].libs ) thisdir=`$ECHO "X$thisdir" | $Xsed -e 's%[\\/][^\\/]*$%%'` ;; + .libs ) thisdir=. ;; + esac + fi + + # Try to get the absolute directory name. + absdir=`cd "$thisdir" && pwd` + test -n "$absdir" && thisdir="$absdir" + + program=lt-'iopipe' + progdir="$thisdir/.libs" + + if test ! -f "$progdir/$program" || + { file=`ls -1dt "$progdir/$program" "$progdir/../$program" 2>/dev/null | /bin/sed 1q`; \ + test "X$file" != "X$progdir/$program"; }; then + + file="$$-$program" + + if test ! -d "$progdir"; then + mkdir "$progdir" + else + rm -f "$progdir/$file" + fi + + # relink executable if necessary + if test -n "$relink_command"; then + if relink_command_output=`eval $relink_command 2>&1`; then : + else + echo "$relink_command_output" >&2 + rm -f "$progdir/$file" + exit 1 + fi + fi + + mv -f "$progdir/$file" "$progdir/$program" 2>/dev/null || + { rm -f "$progdir/$program"; + mv -f "$progdir/$file" "$progdir/$program"; } + rm -f "$progdir/$file" + fi + + if test -f "$progdir/$program"; then + if test "$libtool_execute_magic" != "%%%MAGIC variable%%%"; then + # Run the actual program with our arguments. + + exec "$progdir/$program" ${1+"$@"} + + $ECHO "$0: cannot exec $program $*" 1>&2 + exit 1 + fi + else + # The program doesn't exist. + $ECHO "$0: error: \`$progdir/$program' does not exist" 1>&2 + $ECHO "This script is just a wrapper for $program." 1>&2 + echo "See the libtool documentation for more information." 1>&2 + exit 1 + fi +fi diff --git a/perform/iopipe.chkexe b/perform/iopipe.chkexe new file mode 100644 index 0000000..e69de29 --- /dev/null +++ b/perform/iopipe.chkexe diff --git a/perform/iopipe.chklog b/perform/iopipe.chklog new file mode 100644 index 0000000..583e8f6 --- /dev/null +++ b/perform/iopipe.chklog @@ -0,0 +1,24 @@ +============================ + iopipe Test Log +============================ +fill raw ============================================= +fill hdf5 ============================================= +out raw ============================================= +out hdf5 ============================================= +in raw ============================================= +in hdf5 ============================================= +in hdf5 partial ============================================= +I/O request size is 1000000.0MB +Before getrusage() call +fill raw 0.01user 0.00system 0.01elapsed 3245.99MB/s +fill hdf5 0.00user 0.00system 0.01elapsed 7754.61MB/s +out raw 0.00user 0.02system 0.02elapsed 2195.15MB/s +out hdf5 0.00user 0.02system 0.02elapsed 2154.40MB/s +in raw 0.00user 0.02system 0.02elapsed 2468.22MB/s +in hdf5 0.00user 0.01system 0.01elapsed 5232.41MB/s +in hdf5 partial 0.02user 0.01system 0.03elapsed 1619.29MB/s +0.09user 0.30system 0:02.44elapsed 16%CPU (0avgtext+0avgdata 0maxresident)k +264inputs+4024outputs (2major+16447minor)pagefaults 0swaps + +Finished testing iopipe +============================ diff --git a/perform/iopipe.h5 b/perform/iopipe.h5 Binary files differnew file mode 100644 index 0000000..1048f34 --- /dev/null +++ b/perform/iopipe.h5 diff --git a/perform/iopipe.raw b/perform/iopipe.raw Binary files differnew file mode 100644 index 0000000..7c2624a --- /dev/null +++ b/perform/iopipe.raw diff --git a/perform/overhead b/perform/overhead new file mode 100644 index 0000000..4373671 --- /dev/null +++ b/perform/overhead @@ -0,0 +1,148 @@ +#! /bin/sh + +# overhead - temporary wrapper script for .libs/overhead +# Generated by ltmain.sh (GNU libtool) 2.2.6 +# +# The overhead program cannot be directly executed until all the libtool +# libraries that it depends on are installed. +# +# This wrapper script should never be moved out of the build directory. +# If it is, it will not operate correctly. + +# Sed substitution that helps us do robust quoting. It backslashifies +# metacharacters that are still active within double-quoted strings. +Xsed='/bin/sed -e 1s/^X//' +sed_quote_subst='s/\([`"$\\]\)/\\\1/g' + +# Be Bourne compatible +if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then + emulate sh + NULLCMD=: + # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which + # is contrary to our usage. Disable this feature. + alias -g '${1+"$@"}'='"$@"' + setopt NO_GLOB_SUBST +else + case `(set -o) 2>/dev/null` in *posix*) set -o posix;; esac +fi +BIN_SH=xpg4; export BIN_SH # for Tru64 +DUALCASE=1; export DUALCASE # for MKS sh + +# The HP-UX ksh and POSIX shell print the target directory to stdout +# if CDPATH is set. +(unset CDPATH) >/dev/null 2>&1 && unset CDPATH + +relink_command="(cd /home/abyrne/HDF_Projects/HDF5-C-1.8/perform; { test -z \"\${LD_RUN_PATH+set}\" || unset LD_RUN_PATH || { LD_RUN_PATH=; export LD_RUN_PATH; }; }; { test -z \"\${LD_LIBRARY_PATH+set}\" || unset LD_LIBRARY_PATH || { LD_LIBRARY_PATH=; export LD_LIBRARY_PATH; }; }; PATH=/usr/lib64/qt-3.3/bin:/usr/kerberos/bin:/usr/lib64/ccache:/usr/local/bin:/usr/bin:/bin:/usr/games:/usr/local/sbin:/usr/sbin:/sbin:/home/abyrne/bin; export PATH; gcc -fPIC -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wvolatile-register-var -Wstrict-overflow -Wlogical-op -Wvla -O0 -fomit-frame-pointer -finline-functions -o \$progdir/\$file overhead.o -L/home/abyrne/HDF_Projects/SZIP/szip/lib ../src/.libs/libhdf5.so /home/abyrne/HDF_Projects/SZIP/szip/lib/libsz.a -lz -lm -Wl,-rpath -Wl,/home/abyrne/HDF_Projects/HDF5-C-1.8/src/.libs -Wl,-rpath -Wl,/home/abyrne/HDF_Projects/HDF5-C-1.8/hdf5/lib)" + +# This environment variable determines our operation mode. +if test "$libtool_install_magic" = "%%%MAGIC variable%%%"; then + # install mode needs the following variables: + generated_by_libtool_version='2.2.6' + notinst_deplibs=' ../src/libhdf5.la' +else + # When we are sourced in execute mode, $file and $ECHO are already set. + if test "$libtool_execute_magic" != "%%%MAGIC variable%%%"; then + ECHO="echo" + file="$0" + # Make sure echo works. + if test "X$1" = X--no-reexec; then + # Discard the --no-reexec flag, and continue. + shift + elif test "X`{ $ECHO '\t'; } 2>/dev/null`" = 'X\t'; then + # Yippee, $ECHO works! + : + else + # Restart under the correct shell, and then maybe $ECHO will work. + exec /bin/sh "$0" --no-reexec ${1+"$@"} + fi + fi + + # Find the directory that this script lives in. + thisdir=`$ECHO "X$file" | $Xsed -e 's%/[^/]*$%%'` + test "x$thisdir" = "x$file" && thisdir=. + + # Follow symbolic links until we get to the real thisdir. + file=`ls -ld "$file" | /bin/sed -n 's/.*-> //p'` + while test -n "$file"; do + destdir=`$ECHO "X$file" | $Xsed -e 's%/[^/]*$%%'` + + # If there was a directory component, then change thisdir. + if test "x$destdir" != "x$file"; then + case "$destdir" in + [\\/]* | [A-Za-z]:[\\/]*) thisdir="$destdir" ;; + *) thisdir="$thisdir/$destdir" ;; + esac + fi + + file=`$ECHO "X$file" | $Xsed -e 's%^.*/%%'` + file=`ls -ld "$thisdir/$file" | /bin/sed -n 's/.*-> //p'` + done + + + # Usually 'no', except on cygwin/mingw when embedded into + # the cwrapper. + WRAPPER_SCRIPT_BELONGS_IN_OBJDIR=no + if test "$WRAPPER_SCRIPT_BELONGS_IN_OBJDIR" = "yes"; then + # special case for '.' + if test "$thisdir" = "."; then + thisdir=`pwd` + fi + # remove .libs from thisdir + case "$thisdir" in + *[\\/].libs ) thisdir=`$ECHO "X$thisdir" | $Xsed -e 's%[\\/][^\\/]*$%%'` ;; + .libs ) thisdir=. ;; + esac + fi + + # Try to get the absolute directory name. + absdir=`cd "$thisdir" && pwd` + test -n "$absdir" && thisdir="$absdir" + + program=lt-'overhead' + progdir="$thisdir/.libs" + + if test ! -f "$progdir/$program" || + { file=`ls -1dt "$progdir/$program" "$progdir/../$program" 2>/dev/null | /bin/sed 1q`; \ + test "X$file" != "X$progdir/$program"; }; then + + file="$$-$program" + + if test ! -d "$progdir"; then + mkdir "$progdir" + else + rm -f "$progdir/$file" + fi + + # relink executable if necessary + if test -n "$relink_command"; then + if relink_command_output=`eval $relink_command 2>&1`; then : + else + echo "$relink_command_output" >&2 + rm -f "$progdir/$file" + exit 1 + fi + fi + + mv -f "$progdir/$file" "$progdir/$program" 2>/dev/null || + { rm -f "$progdir/$program"; + mv -f "$progdir/$file" "$progdir/$program"; } + rm -f "$progdir/$file" + fi + + if test -f "$progdir/$program"; then + if test "$libtool_execute_magic" != "%%%MAGIC variable%%%"; then + # Run the actual program with our arguments. + + exec "$progdir/$program" ${1+"$@"} + + $ECHO "$0: cannot exec $program $*" 1>&2 + exit 1 + fi + else + # The program doesn't exist. + $ECHO "$0: error: \`$progdir/$program' does not exist" 1>&2 + $ECHO "This script is just a wrapper for $program." 1>&2 + echo "See the libtool documentation for more information." 1>&2 + exit 1 + fi +fi diff --git a/perform/overhead.chkexe b/perform/overhead.chkexe new file mode 100644 index 0000000..e69de29 --- /dev/null +++ b/perform/overhead.chkexe diff --git a/perform/overhead.chklog b/perform/overhead.chklog new file mode 100644 index 0000000..c2e61d2 --- /dev/null +++ b/perform/overhead.chklog @@ -0,0 +1,15 @@ +============================ + overhead Test Log +============================ +Style Bytes/Chunk +----- ----------- +forward 41.320 +reverse 43.416 +inward 70.664 +outward 41.320 +random 53.896 +0.11user 0.05system 0:00.23elapsed 74%CPU (0avgtext+0avgdata 0maxresident)k +16inputs+600outputs (0major+7761minor)pagefaults 0swaps + +Finished testing overhead +============================ diff --git a/perform/perf_meta b/perform/perf_meta new file mode 100644 index 0000000..4ce87eb --- /dev/null +++ b/perform/perf_meta @@ -0,0 +1,148 @@ +#! /bin/sh + +# perf_meta - temporary wrapper script for .libs/perf_meta +# Generated by ltmain.sh (GNU libtool) 2.2.6 +# +# The perf_meta program cannot be directly executed until all the libtool +# libraries that it depends on are installed. +# +# This wrapper script should never be moved out of the build directory. +# If it is, it will not operate correctly. + +# Sed substitution that helps us do robust quoting. It backslashifies +# metacharacters that are still active within double-quoted strings. +Xsed='/bin/sed -e 1s/^X//' +sed_quote_subst='s/\([`"$\\]\)/\\\1/g' + +# Be Bourne compatible +if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then + emulate sh + NULLCMD=: + # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which + # is contrary to our usage. Disable this feature. + alias -g '${1+"$@"}'='"$@"' + setopt NO_GLOB_SUBST +else + case `(set -o) 2>/dev/null` in *posix*) set -o posix;; esac +fi +BIN_SH=xpg4; export BIN_SH # for Tru64 +DUALCASE=1; export DUALCASE # for MKS sh + +# The HP-UX ksh and POSIX shell print the target directory to stdout +# if CDPATH is set. +(unset CDPATH) >/dev/null 2>&1 && unset CDPATH + +relink_command="(cd /home/abyrne/HDF_Projects/HDF5-C-1.8/perform; { test -z \"\${LD_RUN_PATH+set}\" || unset LD_RUN_PATH || { LD_RUN_PATH=; export LD_RUN_PATH; }; }; { test -z \"\${LD_LIBRARY_PATH+set}\" || unset LD_LIBRARY_PATH || { LD_LIBRARY_PATH=; export LD_LIBRARY_PATH; }; }; PATH=/usr/lib64/qt-3.3/bin:/usr/kerberos/bin:/usr/lib64/ccache:/usr/local/bin:/usr/bin:/bin:/usr/games:/usr/local/sbin:/usr/sbin:/sbin:/home/abyrne/bin; export PATH; gcc -fPIC -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wvolatile-register-var -Wstrict-overflow -Wlogical-op -Wvla -O0 -fomit-frame-pointer -finline-functions -o \$progdir/\$file perf_meta.o -L/home/abyrne/HDF_Projects/SZIP/szip/lib ../test/.libs/libh5test.a ../src/.libs/libhdf5.so /home/abyrne/HDF_Projects/SZIP/szip/lib/libsz.a -lz -lm -Wl,-rpath -Wl,/home/abyrne/HDF_Projects/HDF5-C-1.8/src/.libs -Wl,-rpath -Wl,/home/abyrne/HDF_Projects/HDF5-C-1.8/hdf5/lib)" + +# This environment variable determines our operation mode. +if test "$libtool_install_magic" = "%%%MAGIC variable%%%"; then + # install mode needs the following variables: + generated_by_libtool_version='2.2.6' + notinst_deplibs=' ../src/libhdf5.la' +else + # When we are sourced in execute mode, $file and $ECHO are already set. + if test "$libtool_execute_magic" != "%%%MAGIC variable%%%"; then + ECHO="echo" + file="$0" + # Make sure echo works. + if test "X$1" = X--no-reexec; then + # Discard the --no-reexec flag, and continue. + shift + elif test "X`{ $ECHO '\t'; } 2>/dev/null`" = 'X\t'; then + # Yippee, $ECHO works! + : + else + # Restart under the correct shell, and then maybe $ECHO will work. + exec /bin/sh "$0" --no-reexec ${1+"$@"} + fi + fi + + # Find the directory that this script lives in. + thisdir=`$ECHO "X$file" | $Xsed -e 's%/[^/]*$%%'` + test "x$thisdir" = "x$file" && thisdir=. + + # Follow symbolic links until we get to the real thisdir. + file=`ls -ld "$file" | /bin/sed -n 's/.*-> //p'` + while test -n "$file"; do + destdir=`$ECHO "X$file" | $Xsed -e 's%/[^/]*$%%'` + + # If there was a directory component, then change thisdir. + if test "x$destdir" != "x$file"; then + case "$destdir" in + [\\/]* | [A-Za-z]:[\\/]*) thisdir="$destdir" ;; + *) thisdir="$thisdir/$destdir" ;; + esac + fi + + file=`$ECHO "X$file" | $Xsed -e 's%^.*/%%'` + file=`ls -ld "$thisdir/$file" | /bin/sed -n 's/.*-> //p'` + done + + + # Usually 'no', except on cygwin/mingw when embedded into + # the cwrapper. + WRAPPER_SCRIPT_BELONGS_IN_OBJDIR=no + if test "$WRAPPER_SCRIPT_BELONGS_IN_OBJDIR" = "yes"; then + # special case for '.' + if test "$thisdir" = "."; then + thisdir=`pwd` + fi + # remove .libs from thisdir + case "$thisdir" in + *[\\/].libs ) thisdir=`$ECHO "X$thisdir" | $Xsed -e 's%[\\/][^\\/]*$%%'` ;; + .libs ) thisdir=. ;; + esac + fi + + # Try to get the absolute directory name. + absdir=`cd "$thisdir" && pwd` + test -n "$absdir" && thisdir="$absdir" + + program=lt-'perf_meta' + progdir="$thisdir/.libs" + + if test ! -f "$progdir/$program" || + { file=`ls -1dt "$progdir/$program" "$progdir/../$program" 2>/dev/null | /bin/sed 1q`; \ + test "X$file" != "X$progdir/$program"; }; then + + file="$$-$program" + + if test ! -d "$progdir"; then + mkdir "$progdir" + else + rm -f "$progdir/$file" + fi + + # relink executable if necessary + if test -n "$relink_command"; then + if relink_command_output=`eval $relink_command 2>&1`; then : + else + echo "$relink_command_output" >&2 + rm -f "$progdir/$file" + exit 1 + fi + fi + + mv -f "$progdir/$file" "$progdir/$program" 2>/dev/null || + { rm -f "$progdir/$program"; + mv -f "$progdir/$file" "$progdir/$program"; } + rm -f "$progdir/$file" + fi + + if test -f "$progdir/$program"; then + if test "$libtool_execute_magic" != "%%%MAGIC variable%%%"; then + # Run the actual program with our arguments. + + exec "$progdir/$program" ${1+"$@"} + + $ECHO "$0: cannot exec $program $*" 1>&2 + exit 1 + fi + else + # The program doesn't exist. + $ECHO "$0: error: \`$progdir/$program' does not exist" 1>&2 + $ECHO "This script is just a wrapper for $program." 1>&2 + echo "See the libtool documentation for more information." 1>&2 + exit 1 + fi +fi diff --git a/perform/perf_meta.chkexe b/perform/perf_meta.chkexe new file mode 100644 index 0000000..e69de29 --- /dev/null +++ b/perform/perf_meta.chkexe diff --git a/perform/perf_meta.chklog b/perform/perf_meta.chklog new file mode 100644 index 0000000..14c8e37 --- /dev/null +++ b/perform/perf_meta.chklog @@ -0,0 +1,23 @@ +============================ + perf_meta Test Log +============================ + Performance result of metadata for datasets and attributes + +1. Create 8 attributes for each of 16 existing datasets + H5Dopen2: avg=0.000022s; max=0.000039s; min=0.000019s + H5Dclose: avg=0.000066s; max=0.000905s; min=0.000009s + H5A(create & close): avg=0.000029s; max=0.002232s; min=0.000008s +2. Create 8 attributes for each of 16 new datasets + H5Dcreate2: avg=0.000025s; max=0.000035s; min=0.000021s + H5Dclose: avg=0.000002s; max=0.000003s; min=0.000002s + H5A(create & close): avg=0.000010s; max=0.000020s; min=0.000008s +3. Create 2 attributes for each of 16 existing datasets for 4 times + H5Dopen2: avg=0.000065s; max=0.002824s; min=0.000019s + H5Dclose: avg=0.000009s; max=0.000012s; min=0.000008s + H5A(create & close): avg=0.000013s; max=0.000022s; min=0.000009s +All metadata performance tests passed. +0.03user 0.02system 0:00.15elapsed 37%CPU (0avgtext+0avgdata 0maxresident)k +32inputs+976outputs (0major+7823minor)pagefaults 0swaps + +Finished testing perf_meta +============================ diff --git a/perform/sio_engine.c b/perform/sio_engine.c index d4e7ad3..8e792bd 100644 --- a/perform/sio_engine.c +++ b/perform/sio_engine.c @@ -21,7 +21,9 @@ #include <stdio.h> #include <stdlib.h> #include <fcntl.h> -#include <unistd.h> +#ifdef H5_HAVE_UNISTD_H +# include <unistd.h> +#endif #include <errno.h> #include "hdf5.h" @@ -227,7 +229,7 @@ do_sio(parameters param) */ /* Open file for write */ - strcpy(base_name, "#sio_tmp"); + HDstrcpy(base_name, "#sio_tmp"); sio_create_filename(iot, base_name, fname, sizeof(fname), ¶m); if (sio_debug_level > 0) @@ -335,7 +337,7 @@ sio_create_filename(iotype iot, const char *base_name, char *fullname, size_t si } /* First use the environment variable and then try the constant */ - prefix = getenv("HDF5_PREFIX"); + prefix = HDgetenv("HDF5_PREFIX"); #ifdef HDF5_PREFIX if (!prefix) @@ -349,8 +351,8 @@ sio_create_filename(iotype iot, const char *base_name, char *fullname, size_t si * directory instead. */ register char *user, *login, *subdir; - user = getenv("USER"); - login = getenv("LOGIN"); + user = HDgetenv("USER"); + login = HDgetenv("LOGIN"); subdir = (user ? user : login); if (subdir) { @@ -363,24 +365,24 @@ sio_create_filename(iotype iot, const char *base_name, char *fullname, size_t si fullname[i] = subdir[j]; } else { /* We didn't append the prefix yet */ - strncpy(fullname, prefix, MIN(strlen(prefix), size)); + HDstrncpy(fullname, prefix, MIN(HDstrlen(prefix), size)); } - if ((strlen(fullname) + strlen(base_name) + 1) < size) { + if ((HDstrlen(fullname) + HDstrlen(base_name) + 1) < size) { /* Append the base_name with a slash first. Multiple slashes are * handled below. */ h5_stat_t buf; if (HDstat(fullname, &buf) < 0) /* The directory doesn't exist just yet */ - if (mkdir(fullname, (mode_t)0755) < 0 && errno != EEXIST) { + if (HDmkdir(fullname, 0755) < 0 && errno != EEXIST) { /* We couldn't make the "/tmp/${USER,LOGIN}" subdirectory. * Default to PREFIX's original prefix value. */ - strcpy(fullname, prefix); + HDstrcpy(fullname, prefix); } - strcat(fullname, "/"); - strcat(fullname, base_name); + HDstrcat(fullname, "/"); + HDstrcat(fullname, base_name); } else { /* Buffer is too small */ return NULL; @@ -389,19 +391,19 @@ sio_create_filename(iotype iot, const char *base_name, char *fullname, size_t si /* Buffer is too small */ return NULL; } else { - strcpy(fullname, base_name); + HDstrcpy(fullname, base_name); } /* Append a suffix */ if (suffix) { - if (strlen(fullname) + strlen(suffix) >= size) + if (HDstrlen(fullname) + HDstrlen(suffix) >= size) return NULL; - strcat(fullname, suffix); + HDstrcat(fullname, suffix); } /* Remove any double slashes in the filename */ - for (ptr = fullname, i = j = 0; ptr && i < size; i++, ptr++) { + for (ptr = fullname, i = j = 0; ptr && (i < size); i++, ptr++) { if (*ptr != '/' || last != '/') fullname[j++] = *ptr; @@ -537,14 +539,14 @@ do_write(results *res, file_descr *fd, parameters *parms, void *buffer) h5dset_space_id, H5P_DEFAULT, h5dcpl, H5P_DEFAULT); if (h5ds_id < 0) { - fprintf(stderr, "HDF5 Dataset Create failed\n"); + HDfprintf(stderr, "HDF5 Dataset Create failed\n"); GOTOERROR(FAIL); } hrc = H5Pclose(h5dcpl); /* verifying the close of the dcpl */ if (hrc < 0) { - fprintf(stderr, "HDF5 Property List Close failed\n"); + HDfprintf(stderr, "HDF5 Property List Close failed\n"); GOTOERROR(FAIL); } @@ -841,7 +843,7 @@ do_read(results *res, file_descr *fd, parameters *parms, void *buffer) sprintf(dname, "Dataset_%ld", parms->num_bytes); h5ds_id = H5Dopen2(fd->h5fd, dname, H5P_DEFAULT); if (h5ds_id < 0) { - fprintf(stderr, "HDF5 Dataset open failed\n"); + HDfprintf(stderr, "HDF5 Dataset open failed\n"); GOTOERROR(FAIL); } @@ -1048,7 +1050,7 @@ do_fopen(parameters *param, char *fname, file_descr *fd /*out*/, int flags) fd->posixfd = POSIXOPEN(fname, O_RDONLY); if (fd->posixfd < 0 ) { - fprintf(stderr, "POSIX File Open failed(%s)\n", fname); + HDfprintf(stderr, "POSIX File Open failed(%s)\n", fname); GOTOERROR(FAIL); } @@ -1129,7 +1131,7 @@ set_vfd(parameters *param) HDmemset(memb_name, 0, sizeof memb_name); HDmemset(memb_addr, 0, sizeof memb_addr); - assert(HDstrlen(multi_letters)==H5FD_MEM_NTYPES); + HDassert(HDstrlen(multi_letters)==H5FD_MEM_NTYPES); for (mt=H5FD_MEM_DEFAULT; mt<H5FD_MEM_NTYPES; H5_INC_ENUM(H5FD_mem_t,mt)) { memb_fapl[mt] = H5P_DEFAULT; sprintf(sv[mt], "%%s-%c.h5", multi_letters[mt]); @@ -1220,7 +1222,7 @@ do_cleanupfile(iotype iot, char *filename) hid_t driver; if (clean_file_g == -1) - clean_file_g = (getenv("HDF5_NOCLEANUP")==NULL) ? 1 : 0; + clean_file_g = (HDgetenv("HDF5_NOCLEANUP")==NULL) ? 1 : 0; if (clean_file_g){ diff --git a/perform/sio_perf.c b/perform/sio_perf.c index 5b97667..d852a45 100644 --- a/perform/sio_perf.c +++ b/perform/sio_perf.c @@ -353,7 +353,7 @@ main(int argc, char **argv) } if (opts->output_file) { - if ((output = fopen(opts->output_file, "w")) == NULL) { + if ((output = HDfopen(opts->output_file, "w")) == NULL) { fprintf(stderr, "%s: cannot open output file\n", progname); perror(opts->output_file); goto finish; @@ -918,7 +918,7 @@ report_parameters(struct options *opts) } { - char *prefix = getenv("HDF5_PREFIX"); + char *prefix = HDgetenv("HDF5_PREFIX"); HDfprintf(output, "Env HDF5_PREFIX=%s\n", (prefix ? prefix : "not set")); @@ -992,9 +992,9 @@ parse_command_line(int argc, char *argv[]) if (isalnum(*end) && i < 10) buf[i++] = *end; - if (!strcasecmp(buf, "hdf5")) { + if (!HDstrcasecmp(buf, "hdf5")) { cl_opts->io_types |= SIO_HDF5; - } else if (!strcasecmp(buf, "posix")) { + } else if (!HDstrcasecmp(buf, "posix")) { cl_opts->io_types |= SIO_POSIX; } else { fprintf(stderr, "sio_perf: invalid --api option %s\n", @@ -1145,19 +1145,19 @@ parse_command_line(int argc, char *argv[]) cl_opts->h5_threshold = parse_size_directive(opt_arg); break; case 'v': - if (!strcasecmp(opt_arg, "sec2")) { + if (!HDstrcasecmp(opt_arg, "sec2")) { cl_opts->vfd=sec2; - } else if (!strcasecmp(opt_arg, "stdio")) { + } else if (!HDstrcasecmp(opt_arg, "stdio")) { cl_opts->vfd=stdio; - } else if (!strcasecmp(opt_arg, "core")) { + } else if (!HDstrcasecmp(opt_arg, "core")) { cl_opts->vfd=core; - } else if (!strcasecmp(opt_arg, "split")) { + } else if (!HDstrcasecmp(opt_arg, "split")) { cl_opts->vfd=split; - } else if (!strcasecmp(opt_arg, "multi")) { + } else if (!HDstrcasecmp(opt_arg, "multi")) { cl_opts->vfd=multi; - } else if (!strcasecmp(opt_arg, "family")) { + } else if (!HDstrcasecmp(opt_arg, "family")) { cl_opts->vfd=family; - } else if (!strcasecmp(opt_arg, "direct")) { + } else if (!HDstrcasecmp(opt_arg, "direct")) { cl_opts->vfd=direct; } else { fprintf(stderr, "sio_perf: invalid --api option %s\n", diff --git a/perform/sio_timer.c b/perform/sio_timer.c index cce4f4b..f188a10 100644 --- a/perform/sio_timer.c +++ b/perform/sio_timer.c @@ -1,197 +1,197 @@ -/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * - * Copyright by The HDF Group. * - * All rights reserved. * - * * - * This file is part of HDF5. The full HDF5 copyright notice, including * - * terms governing use, modification, and redistribution, is contained in * - * the files COPYING and Copyright.html. COPYING can be found at the root * - * of the source code distribution tree; Copyright.html can be found at the * - * root level of an installed copy of the electronic HDF5 document set and * - * is linked from the top-level documents page. It can also be found at * - * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * - * access to either file, you may request a copy from help@hdfgroup.org. * - * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ - -/* - * Purpose: - * - * This is a module of useful timing functions for performance testing. - */ - -#include <stdio.h> -#include <stdlib.h> - -#include "sio_timer.h" - - -#include "sio_perf.h" - -/* - * The number to divide the tv_usec field with to get a nice decimal to add to - * the number of seconds. - */ -#define MICROSECOND 1000000.0 - -/* global variables */ -sio_time *timer_g; /* timer: global for stub functions */ - -/* - * Function: sub_time - * Purpose: Struct two time values, and return the difference, in microseconds - * - * Note that the function assumes that a > b - * Programmer: Leon Arber, 1/27/06 - */ -static double sub_time(struct timeval* a, struct timeval* b) -{ - return (((double)a->tv_sec + - ((double)a->tv_usec) / MICROSECOND) - - ((double)b->tv_sec + - ((double)b->tv_usec) / MICROSECOND)); -} - - -/* - * Function: sio_time_new - * Purpose: Build us a brand, spankin', new performance time object. - * The object is a black box to the user. - * Return: Pointer to sio_time object - * Programmer: Bill Wendling, 01. October 2001 - * Modifications: - */ -sio_time * -sio_time_new(void) -{ - sio_time *pt = (sio_time *)calloc(1, sizeof(struct sio_time_)); - - /* set global timer variable */ - timer_g = pt; - - return pt; -} - -/* - * Function: sio_time_destroy - * Purpose: Remove the memory allocated for the sio_time object. Only - * need to call on a pointer allocated with the ``sio_time_new'' - * function. - * Return: Nothing - * Programmer: Bill Wendling, 01. October 2001 - * Modifications: - */ -void -sio_time_destroy(sio_time *pt) -{ - free(pt); - /* reset the global timer pointer too. */ - timer_g = NULL; -} - - - -/* - * Function: set_time - * Purpose: Set the time in a ``sio_time'' object. - * Return: Pointer to the passed in ``sio_time'' object. - * Programmer: Bill Wendling, 01. October 2001 - * Modifications: - */ -sio_time * -set_time(sio_time *pt, timer_type t, int start_stop) -{ - if (pt) { - if (start_stop == START) { - gettimeofday(&pt->sys_timer[t], NULL); - - /* When we start the timer for HDF5_FINE_WRITE_FIXED_DIMS or HDF5_FINE_READ_FIXED_DIMS - * we compute the time it took to only open the file */ - if(t == HDF5_FINE_WRITE_FIXED_DIMS) - pt->total_time[HDF5_FILE_WRITE_OPEN] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_GROSS_WRITE_FIXED_DIMS])); - else if(t == HDF5_FINE_READ_FIXED_DIMS) - pt->total_time[HDF5_FILE_READ_OPEN] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_GROSS_READ_FIXED_DIMS])); - - - } else { - struct timeval sys_t; - - gettimeofday(&sys_t, NULL); - pt->total_time[t] += sub_time(&sys_t, &(pt->sys_timer[t])); - -/* ((double)sys_t.tv_sec + - ((double)sys_t.tv_usec) / MICROSECOND) - - ((double)pt->sys_timer[t].tv_sec + - ((double)pt->sys_timer[t].tv_usec) / MICROSECOND);*/ - - /* When we stop the timer for HDF5_GROSS_WRITE_FIXED_DIMS or HDF5_GROSS_READ_FIXED_DIMS - * we compute the time it took to close the file after the last read/write finished */ - if(t == HDF5_GROSS_WRITE_FIXED_DIMS) - pt->total_time[HDF5_FILE_WRITE_CLOSE] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_FINE_WRITE_FIXED_DIMS])); - else if(t == HDF5_GROSS_READ_FIXED_DIMS) - pt->total_time[HDF5_FILE_READ_CLOSE] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_FINE_READ_FIXED_DIMS])); - - } - - if (sio_debug_level >= 4) { - const char *msg; - - switch (t) { - case HDF5_FILE_OPENCLOSE: - msg = "File Open/Close"; - break; - case HDF5_DATASET_CREATE: - msg = "Dataset Create"; - break; - case HDF5_MPI_WRITE: - msg = "MPI Write"; - break; - case HDF5_MPI_READ: - msg = "MPI Read"; - break; - case HDF5_FINE_WRITE_FIXED_DIMS: - msg = "Fine Write"; - break; - case HDF5_FINE_READ_FIXED_DIMS: - msg = "Fine Read"; - break; - case HDF5_GROSS_WRITE_FIXED_DIMS: - msg = "Gross Write"; - break; - case HDF5_GROSS_READ_FIXED_DIMS: - msg = "Gross Read"; - break; - case HDF5_RAW_WRITE_FIXED_DIMS: - msg = "Raw Write"; - break; - case HDF5_RAW_READ_FIXED_DIMS: - msg = "Raw Read"; - break; - default: - msg = "Unknown Timer"; - break; - } - - fprintf(output, " %s %s: %.2f\n", msg, - (start_stop == START ? "Start" : "Stop"), - pt->total_time[t]); - } - } - - return pt; -} - -/* - * Function: get_time - * Purpose: Get the time from a ``sio_time'' object. - * Return: The number of seconds as a DOUBLE. - * Programmer: Bill Wendling, 01. October 2001 - * Modifications: - */ -double -get_time(sio_time *pt, timer_type t) -{ - return pt->total_time[t]; -} -#ifdef STANDALONE -#include "sio_standalone.c" -#endif - +/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the files COPYING and Copyright.html. COPYING can be found at the root *
+ * of the source code distribution tree; Copyright.html can be found at the *
+ * root level of an installed copy of the electronic HDF5 document set and *
+ * is linked from the top-level documents page. It can also be found at *
+ * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
+ * access to either file, you may request a copy from help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/*
+ * Purpose:
+ *
+ * This is a module of useful timing functions for performance testing.
+ */
+
+#include <stdio.h>
+#include <stdlib.h>
+
+#include "sio_timer.h"
+
+
+#include "sio_perf.h"
+
+/*
+ * The number to divide the tv_usec field with to get a nice decimal to add to
+ * the number of seconds.
+ */
+#define MICROSECOND 1000000.0
+
+/* global variables */
+sio_time *timer_g; /* timer: global for stub functions */
+
+/*
+ * Function: sub_time
+ * Purpose: Struct two time values, and return the difference, in microseconds
+ *
+ * Note that the function assumes that a > b
+ * Programmer: Leon Arber, 1/27/06
+ */
+static double sub_time(struct timeval* a, struct timeval* b)
+{
+ return (((double)a->tv_sec +
+ ((double)a->tv_usec) / MICROSECOND) -
+ ((double)b->tv_sec +
+ ((double)b->tv_usec) / MICROSECOND));
+}
+
+
+/*
+ * Function: sio_time_new
+ * Purpose: Build us a brand, spankin', new performance time object.
+ * The object is a black box to the user.
+ * Return: Pointer to sio_time object
+ * Programmer: Bill Wendling, 01. October 2001
+ * Modifications:
+ */
+sio_time *
+sio_time_new(void)
+{
+ sio_time *pt = (sio_time *)calloc(1, sizeof(struct sio_time_));
+
+ /* set global timer variable */
+ timer_g = pt;
+
+ return pt;
+}
+
+/*
+ * Function: sio_time_destroy
+ * Purpose: Remove the memory allocated for the sio_time object. Only
+ * need to call on a pointer allocated with the ``sio_time_new''
+ * function.
+ * Return: Nothing
+ * Programmer: Bill Wendling, 01. October 2001
+ * Modifications:
+ */
+void
+sio_time_destroy(sio_time *pt)
+{
+ free(pt);
+ /* reset the global timer pointer too. */
+ timer_g = NULL;
+}
+
+
+
+/*
+ * Function: set_time
+ * Purpose: Set the time in a ``sio_time'' object.
+ * Return: Pointer to the passed in ``sio_time'' object.
+ * Programmer: Bill Wendling, 01. October 2001
+ * Modifications:
+ */
+sio_time *
+set_time(sio_time *pt, timer_type t, int start_stop)
+{
+ if (pt) {
+ if (start_stop == START) {
+ HDgettimeofday(&pt->sys_timer[t], NULL);
+
+ /* When we start the timer for HDF5_FINE_WRITE_FIXED_DIMS or HDF5_FINE_READ_FIXED_DIMS
+ * we compute the time it took to only open the file */
+ if(t == HDF5_FINE_WRITE_FIXED_DIMS)
+ pt->total_time[HDF5_FILE_WRITE_OPEN] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_GROSS_WRITE_FIXED_DIMS]));
+ else if(t == HDF5_FINE_READ_FIXED_DIMS)
+ pt->total_time[HDF5_FILE_READ_OPEN] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_GROSS_READ_FIXED_DIMS]));
+
+
+ } else {
+ struct timeval sys_t;
+
+ HDgettimeofday(&sys_t, NULL);
+ pt->total_time[t] += sub_time(&sys_t, &(pt->sys_timer[t]));
+
+/* ((double)sys_t.tv_sec +
+ ((double)sys_t.tv_usec) / MICROSECOND) -
+ ((double)pt->sys_timer[t].tv_sec +
+ ((double)pt->sys_timer[t].tv_usec) / MICROSECOND);*/
+
+ /* When we stop the timer for HDF5_GROSS_WRITE_FIXED_DIMS or HDF5_GROSS_READ_FIXED_DIMS
+ * we compute the time it took to close the file after the last read/write finished */
+ if(t == HDF5_GROSS_WRITE_FIXED_DIMS)
+ pt->total_time[HDF5_FILE_WRITE_CLOSE] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_FINE_WRITE_FIXED_DIMS]));
+ else if(t == HDF5_GROSS_READ_FIXED_DIMS)
+ pt->total_time[HDF5_FILE_READ_CLOSE] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_FINE_READ_FIXED_DIMS]));
+
+ }
+
+ if (sio_debug_level >= 4) {
+ const char *msg;
+
+ switch (t) {
+ case HDF5_FILE_OPENCLOSE:
+ msg = "File Open/Close";
+ break;
+ case HDF5_DATASET_CREATE:
+ msg = "Dataset Create";
+ break;
+ case HDF5_MPI_WRITE:
+ msg = "MPI Write";
+ break;
+ case HDF5_MPI_READ:
+ msg = "MPI Read";
+ break;
+ case HDF5_FINE_WRITE_FIXED_DIMS:
+ msg = "Fine Write";
+ break;
+ case HDF5_FINE_READ_FIXED_DIMS:
+ msg = "Fine Read";
+ break;
+ case HDF5_GROSS_WRITE_FIXED_DIMS:
+ msg = "Gross Write";
+ break;
+ case HDF5_GROSS_READ_FIXED_DIMS:
+ msg = "Gross Read";
+ break;
+ case HDF5_RAW_WRITE_FIXED_DIMS:
+ msg = "Raw Write";
+ break;
+ case HDF5_RAW_READ_FIXED_DIMS:
+ msg = "Raw Read";
+ break;
+ default:
+ msg = "Unknown Timer";
+ break;
+ }
+
+ fprintf(output, " %s %s: %.2f\n", msg,
+ (start_stop == START ? "Start" : "Stop"),
+ pt->total_time[t]);
+ }
+ }
+
+ return pt;
+}
+
+/*
+ * Function: get_time
+ * Purpose: Get the time from a ``sio_time'' object.
+ * Return: The number of seconds as a DOUBLE.
+ * Programmer: Bill Wendling, 01. October 2001
+ * Modifications:
+ */
+double
+get_time(sio_time *pt, timer_type t)
+{
+ return pt->total_time[t];
+}
+#ifdef STANDALONE
+#include "sio_standalone.c"
+#endif
+
diff --git a/perform/sio_timer.h b/perform/sio_timer.h index 445a02e..943ce28 100644 --- a/perform/sio_timer.h +++ b/perform/sio_timer.h @@ -26,6 +26,10 @@ # include <time.h> #endif +#ifdef _WIN32 +# include <winsock.h> +#endif /* _WIN32 */ + /* The different types of timers we can have */ typedef enum timer_type_ { HDF5_FILE_OPENCLOSE, diff --git a/perform/x-diag-rd.dat b/perform/x-diag-rd.dat new file mode 100644 index 0000000..f5588f6 --- /dev/null +++ b/perform/x-diag-rd.dat @@ -0,0 +1,11 @@ +0.5 0.256466 +1 0.508621 +1.5 0.625 +2 1 +2.5 0.71875 +3 0.801887 +3.5 0.77877 +4 1 +4.5 0.840372 +5 0.892857 + diff --git a/perform/x-diag-wr.dat b/perform/x-diag-wr.dat new file mode 100644 index 0000000..d3e86b1 --- /dev/null +++ b/perform/x-diag-wr.dat @@ -0,0 +1,11 @@ +0.5 0.128233 +1 0.256522 +1.5 0.314748 +2 1 +2.5 0.410714 +3 0.53125 +3.5 0.485767 +4 1 +4.5 0.578488 +5 0.690955 + diff --git a/perform/x-gnuplot b/perform/x-gnuplot new file mode 100644 index 0000000..c6d8f44 --- /dev/null +++ b/perform/x-gnuplot @@ -0,0 +1,44 @@ +set yrange [0:1.2] +set ytics 0, 0.1, 1 +set xlabel "Request size as a fraction of chunk size" +set ylabel "Efficiency" +set title "Cache 25 chunks, w0=0.75, Size=(total=2000, chunk=100)" +set terminal postscript +set output "x-rowmaj-rd.ps" +plot "x-rowmaj-rd.dat" title "RowMaj-Read" with lines +set terminal x11 +replot +pause -1 +set yrange [0:1.2] +set ytics 0, 0.1, 1 +set xlabel "Request size as a fraction of chunk size" +set ylabel "Efficiency" +set title "Cache 25 chunks,w0=0.75, Size=(total=2000, chunk=100)" +set terminal postscript +set output "x-rowmaj-wr.ps" +plot "x-rowmaj-wr.dat" title "RowMaj-Write" with lines +set terminal x11 +replot +pause -1 +set yrange [0:1.2] +set ytics 0, 0.1, 1 +set xlabel "Request size as a fraction of chunk size" +set ylabel "Efficiency" +set title "Cache 25 chunks,w0=0.75, Size=(total=2000, chunk=100)" +set terminal postscript +set output "x-diag-rd.ps" +plot "x-diag-rd.dat" title "Diag-Read" with lines +set terminal x11 +replot +pause -1 +set yrange [0:1.2] +set ytics 0, 0.1, 1 +set xlabel "Request size as a fraction of chunk size" +set ylabel "Efficiency" +set title "Cache 25 chunks, w0=0.75, Size=(total=2000, chunk=100)" +set terminal postscript +set output "x-diag-wr.ps" +plot "x-diag-wr.dat" title "Diag-Write" with lines +set terminal x11 +replot +pause -1 diff --git a/perform/x-rowmaj-rd.dat b/perform/x-rowmaj-rd.dat new file mode 100644 index 0000000..43c1bcb --- /dev/null +++ b/perform/x-rowmaj-rd.dat @@ -0,0 +1,11 @@ +0.5 1 +1 1 +1.5 0.750469 +2 1 +2.5 0.833333 +3 1 +3.5 0.869565 +4 1 +4.5 0.909091 +5 1 + diff --git a/perform/x-rowmaj-wr.dat b/perform/x-rowmaj-wr.dat new file mode 100644 index 0000000..600859b --- /dev/null +++ b/perform/x-rowmaj-wr.dat @@ -0,0 +1,11 @@ +0.5 0.5 +1 1 +1.5 0.445931 +2 1 +2.5 0.568182 +3 1 +3.5 0.633914 +4 1 +4.5 0.719424 +5 1 + diff --git a/perform/zip_perf b/perform/zip_perf new file mode 100644 index 0000000..22213f6 --- /dev/null +++ b/perform/zip_perf @@ -0,0 +1,148 @@ +#! /bin/sh + +# zip_perf - temporary wrapper script for .libs/zip_perf +# Generated by ltmain.sh (GNU libtool) 2.2.6 +# +# The zip_perf program cannot be directly executed until all the libtool +# libraries that it depends on are installed. +# +# This wrapper script should never be moved out of the build directory. +# If it is, it will not operate correctly. + +# Sed substitution that helps us do robust quoting. It backslashifies +# metacharacters that are still active within double-quoted strings. +Xsed='/bin/sed -e 1s/^X//' +sed_quote_subst='s/\([`"$\\]\)/\\\1/g' + +# Be Bourne compatible +if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then + emulate sh + NULLCMD=: + # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which + # is contrary to our usage. Disable this feature. + alias -g '${1+"$@"}'='"$@"' + setopt NO_GLOB_SUBST +else + case `(set -o) 2>/dev/null` in *posix*) set -o posix;; esac +fi +BIN_SH=xpg4; export BIN_SH # for Tru64 +DUALCASE=1; export DUALCASE # for MKS sh + +# The HP-UX ksh and POSIX shell print the target directory to stdout +# if CDPATH is set. +(unset CDPATH) >/dev/null 2>&1 && unset CDPATH + +relink_command="(cd /home/abyrne/HDF_Projects/HDF5-C-1.8/perform; { test -z \"\${LD_RUN_PATH+set}\" || unset LD_RUN_PATH || { LD_RUN_PATH=; export LD_RUN_PATH; }; }; { test -z \"\${LD_LIBRARY_PATH+set}\" || unset LD_LIBRARY_PATH || { LD_LIBRARY_PATH=; export LD_LIBRARY_PATH; }; }; PATH=/usr/lib64/qt-3.3/bin:/usr/kerberos/bin:/usr/lib64/ccache:/usr/local/bin:/usr/bin:/bin:/usr/games:/usr/local/sbin:/usr/sbin:/sbin:/home/abyrne/bin; export PATH; gcc -fPIC -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wvolatile-register-var -Wstrict-overflow -Wlogical-op -Wvla -O0 -fomit-frame-pointer -finline-functions -o \$progdir/\$file zip_perf.o -L/home/abyrne/HDF_Projects/SZIP/szip/lib ../tools/lib/.libs/libh5tools.a ../test/.libs/libh5test.a ../src/.libs/libhdf5.so /home/abyrne/HDF_Projects/SZIP/szip/lib/libsz.a -lz -lm -Wl,-rpath -Wl,/home/abyrne/HDF_Projects/HDF5-C-1.8/src/.libs -Wl,-rpath -Wl,/home/abyrne/HDF_Projects/HDF5-C-1.8/hdf5/lib)" + +# This environment variable determines our operation mode. +if test "$libtool_install_magic" = "%%%MAGIC variable%%%"; then + # install mode needs the following variables: + generated_by_libtool_version='2.2.6' + notinst_deplibs=' ../src/libhdf5.la' +else + # When we are sourced in execute mode, $file and $ECHO are already set. + if test "$libtool_execute_magic" != "%%%MAGIC variable%%%"; then + ECHO="echo" + file="$0" + # Make sure echo works. + if test "X$1" = X--no-reexec; then + # Discard the --no-reexec flag, and continue. + shift + elif test "X`{ $ECHO '\t'; } 2>/dev/null`" = 'X\t'; then + # Yippee, $ECHO works! + : + else + # Restart under the correct shell, and then maybe $ECHO will work. + exec /bin/sh "$0" --no-reexec ${1+"$@"} + fi + fi + + # Find the directory that this script lives in. + thisdir=`$ECHO "X$file" | $Xsed -e 's%/[^/]*$%%'` + test "x$thisdir" = "x$file" && thisdir=. + + # Follow symbolic links until we get to the real thisdir. + file=`ls -ld "$file" | /bin/sed -n 's/.*-> //p'` + while test -n "$file"; do + destdir=`$ECHO "X$file" | $Xsed -e 's%/[^/]*$%%'` + + # If there was a directory component, then change thisdir. + if test "x$destdir" != "x$file"; then + case "$destdir" in + [\\/]* | [A-Za-z]:[\\/]*) thisdir="$destdir" ;; + *) thisdir="$thisdir/$destdir" ;; + esac + fi + + file=`$ECHO "X$file" | $Xsed -e 's%^.*/%%'` + file=`ls -ld "$thisdir/$file" | /bin/sed -n 's/.*-> //p'` + done + + + # Usually 'no', except on cygwin/mingw when embedded into + # the cwrapper. + WRAPPER_SCRIPT_BELONGS_IN_OBJDIR=no + if test "$WRAPPER_SCRIPT_BELONGS_IN_OBJDIR" = "yes"; then + # special case for '.' + if test "$thisdir" = "."; then + thisdir=`pwd` + fi + # remove .libs from thisdir + case "$thisdir" in + *[\\/].libs ) thisdir=`$ECHO "X$thisdir" | $Xsed -e 's%[\\/][^\\/]*$%%'` ;; + .libs ) thisdir=. ;; + esac + fi + + # Try to get the absolute directory name. + absdir=`cd "$thisdir" && pwd` + test -n "$absdir" && thisdir="$absdir" + + program=lt-'zip_perf' + progdir="$thisdir/.libs" + + if test ! -f "$progdir/$program" || + { file=`ls -1dt "$progdir/$program" "$progdir/../$program" 2>/dev/null | /bin/sed 1q`; \ + test "X$file" != "X$progdir/$program"; }; then + + file="$$-$program" + + if test ! -d "$progdir"; then + mkdir "$progdir" + else + rm -f "$progdir/$file" + fi + + # relink executable if necessary + if test -n "$relink_command"; then + if relink_command_output=`eval $relink_command 2>&1`; then : + else + echo "$relink_command_output" >&2 + rm -f "$progdir/$file" + exit 1 + fi + fi + + mv -f "$progdir/$file" "$progdir/$program" 2>/dev/null || + { rm -f "$progdir/$program"; + mv -f "$progdir/$file" "$progdir/$program"; } + rm -f "$progdir/$file" + fi + + if test -f "$progdir/$program"; then + if test "$libtool_execute_magic" != "%%%MAGIC variable%%%"; then + # Run the actual program with our arguments. + + exec "$progdir/$program" ${1+"$@"} + + $ECHO "$0: cannot exec $program $*" 1>&2 + exit 1 + fi + else + # The program doesn't exist. + $ECHO "$0: error: \`$progdir/$program' does not exist" 1>&2 + $ECHO "This script is just a wrapper for $program." 1>&2 + echo "See the libtool documentation for more information." 1>&2 + exit 1 + fi +fi diff --git a/perform/zip_perf.chkexe b/perform/zip_perf.chkexe new file mode 100644 index 0000000..e69de29 --- /dev/null +++ b/perform/zip_perf.chkexe diff --git a/perform/zip_perf.chklog b/perform/zip_perf.chklog new file mode 100644 index 0000000..156146f --- /dev/null +++ b/perform/zip_perf.chklog @@ -0,0 +1,38 @@ +============================ + zip_perf Test Log +============================ +Filesize: 67108864 +Compression Level: 6 +Buffer size == 128KB + Uncompressed Write Time: 0.14s + Uncompressed Write Throughput: 474.05MB/s + Compression Ratio: 0.00113678 + Compressed Write Time: 0.75s + Compressed Write Throughput: 85.06MB/s + Compression Time: 0.738815s +Buffer size == 256KB + Uncompressed Write Time: 0.12s + Uncompressed Write Throughput: 556.16MB/s + Compression Ratio: 0.00105667 + Compressed Write Time: 0.74s + Compressed Write Throughput: 86.99MB/s + Compression Time: 0.733302s +Buffer size == 512KB + Uncompressed Write Time: 0.12s + Uncompressed Write Throughput: 547.23MB/s + Compression Ratio: 0.0010128 + Compressed Write Time: 0.76s + Compressed Write Throughput: 84.15MB/s + Compression Time: 0.758976s +Buffer size == 1MB + Uncompressed Write Time: 0.12s + Uncompressed Write Throughput: 540.06MB/s + Compression Ratio: 0.000990868 + Compressed Write Time: 0.76s + Compressed Write Throughput: 84.04MB/s + Compression Time: 0.760352s +2.94user 0.63system 0:03.75elapsed 95%CPU (0avgtext+0avgdata 0maxresident)k +32inputs+528768outputs (0major+34635minor)pagefaults 0swaps + +Finished testing zip_perf +============================ |