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authorjhendersonHDF <jhenderson@hdfgroup.org>2023-08-02 20:19:21 (GMT)
committerGitHub <noreply@github.com>2023-08-02 20:19:21 (GMT)
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Fix h5repack for variable-length datatyped datasets (#3331)
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diff --git a/release_docs/RELEASE.txt b/release_docs/RELEASE.txt
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@@ -599,6 +599,22 @@ Bug Fixes since HDF5-1.14.0 release
Tools
-----
+ - Fixed an issue in h5repack for variable-length typed datasets
+
+ When repacking datasets into a new file, h5repack tries to determines whether
+ it can use H5Ocopy to copy each dataset into the new file, or if it needs to
+ manually re-create the dataset, then read data from the old dataset and write
+ it to the new dataset. H5repack was previously using H5Ocopy for datasets with
+ variable-length datatypes, but this can be problematic if the global heap
+ addresses involved do not match exactly between the old and new files. These
+ addresses could change for a variety of reasons, such as the command-line options
+ provided to h5repack, how h5repack allocate space in the repacked file, etc.
+ Since H5Ocopy does not currently perform any translation when these addresses
+ change, datasets that were repacked with H5Ocopy could become unreadable in the
+ new file. H5repack has been fixed to repack variable-length typed datasets without
+ using H5Ocopy to ensure that the new datasets always have the correct global heap
+ addresses.
+
- Names of objects with square brackets will have trouble without the
special argument, --no-compact-subset, on the h5dump command line.