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authorLarry Knox <lrknox>2017-01-31 22:05:20 (GMT)
committerLarry Knox <lrknox>2017-01-31 22:05:20 (GMT)
commit43d051fbd5185cefb2e6ca3380eb1d3780ca1558 (patch)
treef2eaa52da32eb91020bc04bbde5a1eb7761af09d /release_docs
parentc4142e07ddd04a97f1039900192bc18dca969dfc (diff)
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Update "Supported Platforms" and "Tested Configuration Features Summary" sections.
Remove changes made before HDF5 1.10.0-patch1 from "New Features" and "Bug Fixes" sections.
Diffstat (limited to 'release_docs')
-rw-r--r--release_docs/RELEASE.txt1383
1 files changed, 109 insertions, 1274 deletions
diff --git a/release_docs/RELEASE.txt b/release_docs/RELEASE.txt
index 1dbc05f..fdb1fe1 100644
--- a/release_docs/RELEASE.txt
+++ b/release_docs/RELEASE.txt
@@ -4,21 +4,34 @@ HDF5 version 1.9.236 currently under development
INTRODUCTION
-This document describes the differences between HDF5-1.9.0 and
-HDF5 1.9.x snapshot, and contains information on the platforms
-tested and known problems in HDF5-1.9.x.
+This document describes the differences between HDF5-1.10.0-patch1 and
+HDF5 1.10.1, and contains information on the platforms tested and known problems in HDF5-1.10.1.
For more details check the HISTORY*.txt files in the HDF5 source.
-Links to HDF5 1.9.x source code can be found on The HDF Group's
-development FTP server at the following location:
- ftp://ftp.hdfgroup.uiuc.edu/pub/outgoing/hdf5/snapshots
+Links to HDF5 1.10.1 source code, documentation, and additional materials can be found on The HDF5 web page at:
+
+ https://support.hdfgroup.org/HDF5/
+
+The HDF5 1.10.1 release can be obtained from:
+
+ https://support.hdfgroup.org/HDF5/release/obtain5110.html
+
User documentation for the snapshot can be accessed directly at this location:
- http://www.hdfgroup.uiuc.edu/HDF5/doc_dev_snapshot/H5_dev/
-For more information, see the HDF5 home page:
+ https://support.hdfgroup.org/HDF5/doc1.10/
+
+New features in the HDF5-1.10.x release series, including brief general
+descriptions of some new and modified APIs, are described in the "What's New
+in 1.10.1?" document:
+
+ https://support.hdfgroup.org/HDF5/doc/ADGuide/WhatsNew1101.html
- http://www.hdfgroup.org/HDF5/
+All new and modified APIs are listed in detail in the "HDF5 Software Changes
+from Release to Release" document, in the section "Release 1.8.19 (current
+release) versus Release 1.10.1
+
+ https://support.hdfgroup.org/HDF5/doc1.10/ADGuide/Changes.html
If you have any questions or comments, please send them to the HDF Help Desk:
@@ -29,7 +42,7 @@ CONTENTS
- New Features
- Support for new platforms and languages
-- Bug Fixes since HDF5-1.8.0
+- Bug Fixes since HDF5-1.10.0-patch1
- Supported Platforms
- Tested Configuration Features Summary
- More Tested Platforms
@@ -42,1196 +55,76 @@ New Features
Configuration:
-------------
- CMake minimum is now 3.2.2. (ADB 2016/01/10)
- - CMake
- Added NAMESPACE hdf5:: to package configuration files
- - CMake: change CTEST_BUILD_CONFIGURATION to CTEST_CONFIGURATION_TYPE, which is
- recommended by CMake documentation.
- HDFFV-9971 (ADB 2016/8/22)
- - Java JNI library API wrappers and supporting files added as HDF_JAVA language
- option. Both configure and CMake disable this option by default.
- HDFFV-9552 (ADB 2016/02/28)
- - CMake minimum is now 3.1.0. (ADB 2015/11/14)
- - cmakehdf5: configure options added to enable or disable the building of
- different API's and testings. See "cmakehdf5 --help" for details.
- (AKC - 2014/12/09 HDFFV-8932)
- - Autotools: Automake updated to 1.14.1 (ADB - 2014/04/08)
- - CMake: Moved minimum CMake version to 2.8.11 which enables better library
- include processing. (ADB - 2014/03/26)
- - New configuration option added to change the default plugin path.
- configure option is --with-default-plugin=location
- cmake option is -DH5_DEFAULT_PLUGINDIR:PATH=location
- HDFFV-8513. (ADB 2013/09/04)
- - Rename FFLAGS to FCFLAGS in configure (ADB 2013/08/13)
- - CMake minimum is now 2.8.10. (ADB 2013/01/14)
- - A new tool, cmakehdf5, which is a build command script similar to
- buildhdf5 is added and is available in the bin directory.
- (AKC - 2012/12/12)
- - Fixed AIX Fortran compiler flags to use appropriate settings for
- debugging, profiling, optimization situations. HDFFV-8069. (AKC
- 2012/09/27)
- - Updated to latest autotools and changed all hard *.sh scripts to
- configure managed *.sh.in files. Removed overloading of autotools
- TESTS variable by examples and tests. Renamed configure.in to
- configure.ac. (ADB - 2012/08/23 - HDFFV-8129)
- - Added code to display the version information of XL fortran and C++
- in the summary of configure. (AKC - 2012/02/28 - HDFFV-7793)
- - Configure now generates Makefiles that build in "silent make mode"
- by default in which compile and link lines are significantly
- simplified for clarity. To override this and view actual compile and
- link lines during building, the --disable-silent-rules flag can be used
- at configure time, or the 'make' command can be followed by V=1, to
- indicate a "verbose" make. (MAM - 2011/4/14).
- - Added mpicc and mpif90 as the default C and Fortran compilers for Linux
- systems when --enable-parallel is specified but no $CC or $FC is defined.
- (AKC - 2011/2/7)
- - Added a new configure option, "--enable-unsupported", which can
- be used to stop configure from preventing the use of unsupported
- configure option combinations, such as c++ in parallel or parallel
- HDF5 with threadsafe. Use at your own risk, as it may result in a
- library that won't compile or run as expected!
- (MAM - 2010/11/17 - Bug 2061)
- - PHDF5 changed to use "mpiexec", instead of mpirun, as the default MPI
- applications startup command as defined in the MPI-2 definition, section
- 4.1. (AKC - 2010/6/11 - Bug 1921)
- - Configure now adds appropriate defines for supporting large (64-bit)
- files on all systems, where supported, by default, instead of only linux.
- This largefile support is controllable with the --enable-largefile
- configure option. This is replacing the linux-specific --enable-linux-lfs
- option, which has been removed from configure.
- (MAM - 2010/05/05 - 1772/1434)
- - Upgraded versions of autotools used to generate configuration suite.
- We now use Automake 1.11.1, Autoconf 2.65, and Libtool 2.2.6b.
- MAM 2010/04/15.
- - Added the xlc-* and mpcc_r-* BASENAME patterns to be recognized as IBM
- compilers so that the ibm compiler options can be added properly. This
- allows non-system-default compiler command names (e.g. xlc-m.n.k.l) be
- recognized. AKC 2009/11/26.
- - Configuration suite now uses Automake 1.11 and Autoconf 2.64.
- MAM 2009/08/11.
- - Changed default Gnu fortran compiler from g95 to gfortran since
- gfortran is more likely installed with gcc now. -AKC 2009/07/19-
- - Added libtool version numbers to generated c++, fortran, and
- hl libraries. MAM 2009/04/19.
- - Regenerated Makefile.ins using Automake 1.10.2. MAM 2009/04/19.
- - Added a Make target of check-all-install to test the correctness of
- installing via the prefix= or $DESTDIR options. AKC - 2009/04/14
- - Configuration suite now uses Libtool 2.2.6a. MAM 2008/10/24
-
- - Configuration suite now uses Autoconf 2.61, Automake 1.10.1.
- MAM 2008/05/05.
-
- - The new configure option "--disable-sharedlib-rpath" disables
- embedding the '-Wl,-rpath' information into executables when
- shared libraries are produced, and instead solely relies on the
- information in LD_LIBRARY_PATH. (MAM - 2008/05/15)
+
Library:
--------
- - Java API added new H5Iget_name that returns a string.
- The old function, now deprecated, would cause a memory leak and
- not return a proper String value.
- HDFFV-9972 (ADB 2016/8/22)
- - Add support to expand the plugin path value on Windows when the path
- includes an environment variable.
- HDFFV-9706 (ADB 2016/8/22)
-
- - H5F_ACC_DEBUG labeled "deprecated"
-
- The symbol was originally used to emit some extra debugging
- informationi in the multi VFD. The underlying functionality
- was removed due to disuse in HDF5 1.8.16 though the symbol
- remained defined since it was visible in H5Fpublic.h.
-
- In this release, the symbol has been labeled deprecated and will
- not be defined when H5_NO_DEPRECATED_SYMBOLS is defined.
-
- (DER - 2015-04-30, HDFFV-1074)
-
- - The library can load filter libraries dynamically during runtime. Users
- can set the search path through environment variable HDF5_PLUGIN_PATH
- and call H5Pset_filter to enable a dynamic filter. (SLU - 2013/04/08)
- - Added new API functions H5Dscatter and H5Dgather to scatter data to and
- and gather data from a selection within a memory buffer.
- (NAF - 2013/02/05)
- - The library now supports the data conversion from enumeration to numeric
- (integer and floating-point number) datatypes. See Issue 8221.
- (SLU - 2012/10/23)
- - The data sieve buffer size was for all the datasets in the file. It
- could waste memory if any dataset size is smaller than the sieve buffer
- size. Now the library picks the smaller one between the dataset size
- and the sieve buffer size from the file access property. See Issue 7934.
- (SLU - 2012/4/2)
- - I added a new parameter of object access property list to the function
- H5Rdereference (Issue 2763). It's called H5Rdereference2 now. The former
- H5Rdereference function has been deprecated to H5Rdereference1. (SLU -
- 2011/7/18)
- - H5Tcreate now supports string type (fixed-length and variable-length).
- (SLU - 2011/05/20)
- - Added ability to cache files opened through external links. Added new
- public functions H5Pset_elink_file_cache_size(),
- H5Pget_elink_file_cache_size(), and H5Fclear_elink_file_cache().
- (NAF - 2011/02/17)
- - Removed all old code for Metraowerks compilers, bracketed by
- __MWERKS__). Metraowerks compiler is long gone. (AKC - 2010/11/17)
- - Added support for threadsafety on windows using the windows threads
- library. Use the HDF5_ENABLE_THREADSAFE option in CMake while on a
- windows platform to enable this functionality. This is supported on
- Windows Vista and newer Windows operating systems. (MAM - 2010/09/10)
- - When a mandatory filter failed to write data chunks, the dataset
- couldn't close (bug 1260). The fix releases all resources and closes
- the dataset but returns a failure. (SLU - 2010/9/8)
- - H5Tset_order and H5Tget_order now support all data types. A new byte
- order H5T_ORDER_MIXED has been added specifically for compound datatype
- and its derived type. Please see bug #1934. (SLU - 2010/8/23)
- - Improved performance of the chunk cache by avoiding unnecessary b-tree
- lookups of chunks already in cache. (NAF - 2010/06/15)
- - Greatly improved performance of extending a dataset with early
- allocation. (NAF - 2010/03/24 - 1637)
- - Added support for filtering densely stored groups. Many of the API
- functions related to filters have been extended to support dense groups
- as well as datasets. Pipeline messages can now be stored in a group's
- object header. (NAF/QAK - 2009/10/8)
- - The embedded library information is displayed by H5check_version() if a
- version mismatch is detected. Also changed H5check_version() to
- suppress the warning message totally if $HDF5_DISABLE_VERSION_CHECK is 2
- or higher. (Old behavior treated 3 or higher the same as 1, that is
- print a warning and allows the program to continue. (AKC - 2009/9/28)
- - If a user does not care for the extra library information insert
- in the executables, he may turn it off by --disable-embedded-libinfo
- during configure. (AKC - 2009/9/15)
- - Corrected problem where library would re-write the superblock in a file
- opened for R/W access, even when no changes were made to the file.
- (QAK - 2009/08/20, Bz#1473)
- - Separated "factory" free list class from block free lists. These free
- lists are dynamically created and manage blocks of a fixed size.
- H5set_free_list_limits() will use the same settings specified for block
- free lists for factory free lists. (NAF - 2009/04/08)
- - Added support for dense attributes to H5Ocopy. (XCao/NAF - 2009/01/29)
- - Added H5Pset_elink_cb and H5Pget_elink_cb functions to support a
- user-defined callback function for external link traversal.
- (NAF - 2009/01/08)
- - Added H5Pset_elink_acc_flags and H5Pget_elink_acc_flags functions to
- allow the user to specify the file access flags used to open the target
- file of an external link. (NAF - 2009/01/08)
- - Added H5Pset_chunk_cache() and H5Pget_chunk_cache() functions to allow
- individual rdcc configuration for each dataset. Added
- H5Dget_access_plist() function to retrieve a dataset access property
- list from a dataset. (NAF - 2008/11/12)
- - Added H5Iis_valid() function to check if an id is valid without producing
- an error message. (NAF - 2008/11/5)
- - Added two new public routines: H5Pget_elink_fapl() and
- H5Pset_elink_fapl(). (see bug #1247) (VC - 2008/10/13)
- - Improved free space tracking in file to be faster. (QAK - 2008/10/06)
- - Added 'mounted' field to H5G_info_t struct. (QAK - 2008/07/15)
+ -
Parallel Library:
-----------------
- - Add H5Pget_mpio_no_collective_cause() function that retrive reasons
- why the collective I/O was broken during read/write IO access.
- (JKM - 2012/08/30 HDFFV-8143)
- - Special Collective IO (IO when some processes do not contribute to the
- IO) and Complex Derived Datatype MPI functionalities are no longer
- conditionally enabled in the library by configure. They are always
- enabled in order to take advantage of performance boosts from these
- behaviors. Older MPI implementations that do not allow for these
- functionalities can no longer by used by HDF5. (MAM - 2011/07/08).
- - Modified parallel tests to run with arbitrary number of processes. The
- modified tests are testphdf5 (parallel dataset access), t_chunk_alloc
- (chunk allocation), and t_posix_compliant (posix compliance). The rest of
- the parallel tests already use in the code the number of processes
- available in the communicator. (CMC - 2009/04/28)
+ -
Fortran Library:
----------------
-
- - Added parallel routine H5Pget_mpio_actual_io_mode_f (MSB - 2012/09/27)
-
- - Added for the C API the Fortran wrapper:
- h5ocopy_f (MSB - 2012/03/22)
-
-
- HDF5 Fortran library was enhanced to support Fortran 2003 standard.
- The following features are available when the HDF5 library is configured
- using --enable-fortran --enable-fortran2003 configure flags AND
- if fortran compiler is Fortran2003 compliant:
-
- - Subroutines overloaded with the C_PTR derived type:
- h5pget_f
- h5pget_fill_value_f
- h5pinsert_f
- h5pregister_f
- h5pset_f
- h5pset_fill_value_f
- h5rcreate_f
- h5rderefrence_f
- h5rget_name_f
- h5rget_obj_type_f
- - Subroutines overloaded with the C_PTR derived type
- and simplified signatures:
- h5aread_f
- h5awrite_f
- h5dread_f
- h5dwrite_f
- - New subroutines
- h5dvlen_reclaim_f
- h5literate_by_name_f
- h5literate_f
- h5ovisit_f
- h5tconvert_f
-
- - Subroutines with additional optional parameters:
- h5pcreate_class_f
- (EIP - 2011/10/14)
-
- - Added for the C APIs the Fortran wrappers:
- h5dget_access_plist_f
- h5iis_valid_f
- h5pset_chunk_cache_f
- h5pget_chunk_cache_f
- (MSB - 2009/04/17)
-
-
+ -
C++ Library:
------------
- - New member function added
-
- The assignment operator ArrayType::operator= is added because ArrayType
- has pointer data members.
-
- (BMR, 2016/03/07, HDFFV-9562)
-
- - New member functions
- + Overloaded CommonFG::getObjnameByIdx to take char* for name
- + Overloaded CommonFG::getObjTypeByIdx to return type name as a char*.
- (BMR - 2010/05/02)
- + DataSet::getInMemDataSize() to simplify getting the dataset's
- data size in memory. (BMR - 2009/07/26)
- - These member functions were added as wrapper for H5Rdereference to
- replace the incorrect IdComponent::dereference().
- void H5Object::dereference(H5File& h5file, void* ref)
- void H5Object::dereference(H5Object& obj, void* ref)
- In addition, these constructors were added to create the associated
- objects by way of dereference:
- Attribute(H5Object& obj, void* ref);
- Attribute(H5File& file, void* ref);
- DataSet(H5Object& obj, void* ref);
- DataSet(H5File& file, void* ref);
- DataType(H5Object& obj, void* ref);
- DataType(H5File& file, void* ref);
- Group(H5Object& obj, void* ref);
- Group(H5File& obj, void* ref);
- (BMR - 2008/08/10)
-
-
+ -
Tools:
------
- - h5repack: Added ability to use plugin filters. HDFFV-8345 (ADB - 2013/09/04).
- - h5dump: Added option -N --any_path, which searches the file for paths that
- match the search path. HDFFV-7989 (ADB - 2013/08/12).
- - h5dump: Added optional arg 0 to -A, which excludes attributes from display.
- HDFFV-8134 (ADB - 2013/08/01).
- - h5dump: Fixed displaying compression ratio for unknown or user-defined
- filters. HDFFV-8344 (XCAO 2013/03/19)
- - h5dump: Changed UNKNOWN_FILTER to USER_DEFINED_FILTER for user defined filter.
- HDFFV-8346 (XCAO 2013/03/19)
- - h5dump: Added capability for "-a" option to show attributes containing "/"
- by using an escape character. For example, for a dataset "/dset"
- containing attribute "speed(m/h)", use "h5dump -a "/dset/speed(\/h)"
- to show the content of the attribute. See details at HDFFV-7523
- (PC -- 2012/03/12)
- - h5dump: Added ability to apply command options across multiple files using a
- wildcard in the filename. Example; "h5dump -H -d Dataset1 tarr*.h5".
- HDFFV-7876 (ADB - 2012/03/12).
- - h5repack: Improved performance for big chunked datasets (size > 128MB)
- when used with layout (-l) or compression (-f) option.
- It would perform much better prior to the improvement,
- especially for cases that chunk dimentions looks like
- "1024x5x1" (compare to "1x5x1024"). When bigger numbers
- are toward front and smaller number is toward back in chunk
- dimentions. HDFFV-7862 (JKM - 2012/03/01)
- - h5dump: Added new option --no-compact-subset. This option will not
- interpret the '[' character as starting the compact form of
- subsetting. This is useful when the "h5dump error: unable to
- open dataset "datset_name"" message is output because a dataset
- name contains a '[' character. HDFFV-7689 (ADB - 2012/01/31)
- - h5dump: Corrected schema location:
- <hdf5:HDF5-File
- xmlns:hdf5="http://hdfgroup.org/HDF5/XML/schema/HDF5-File"
- xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://hdfgroup.org/HDF5/XML/schema/HDF5-File
- http://www.hdfgroup.org/HDF5/XML/schema/HDF5-File.xsd">
- (ADB - 2011/08/10)
- - h5diff: Added new level for -v (verbose) option. The new levels are
- 1 and 2. So -v1 and -v2 can be specified to view more
- information about attributes differences.
- Bug#2121 (JKM 2011/3/23)
- - h5dump: Added new option --enable-error-stack. This option will display
- error stack information in the output stream. This is useful
- when the "h5dump: Unable to print data" message is output.
- (ADB - 2011/02/24)
- - h5diff: Add a new flag --exclude-path. Specified path to an object will
- be excluded from comparing the two files or two groups. If group
- is specified all the member objects will be excluded.
- (JKM - 2010/09/16).
- - h5ls: Add new flag --no-dangling-links. (refer to --help for details)
- (JKM - 2010/06/15)
- - h5ls: Add new flag --follow-symlinks. (refer to --help for details)
- (JKM - 2010/05/25)
- - h5diff: Add new flag --no-dangling-links. (refer to --help for details)
- (JKM - 2010/02/10)
- - h5diff: Add new flag --follow-symlinks. (refer to --help for details)
- (JKM - 2010/01/25)
- - h5diff: fix for displaying garbage value on LE machine for BE data.
- (JKM - 2009/11/20)
- - h5dump: subsetting now allows default for count. Also trailing ; in short form
- can be omitted after last specified value.
- (ADB - 2009/09/04)
- - h5dump/h5ls: now can display data in region references
- using new -R, --region flag.
- (ADB - 2009/09/04)
- - h5diff: new flag, -c, --compare, list objects that are not comparable.
- (PVN - 2009/4/10 - 1368)
- - h5diff new flag, -N, --nan, avoids NaNs detection. (PVN - 2009/4/10)
- - h5dump correctly specifies XML dtd / schema urls (ADB - 2009/4/3 - 1519)
- - h5repack now handles group creation order. (PVN - 2009/4/2 - 1402)
- - h5dump: added a printing of the compression ratio of uncompressed and compressed
- sizes for cases where compression filters are present. (PVN - 2008/05/01)
- - h5dump: added an option to allow a user defined formatting string for printf
- regarding floating point numbers. (PVN - 2008/05/06)
- - h5dump: support for external links, display the object that the external link
- points to. (PVN - 2008/05/12)
- - h5repack: add a userblock to an HDF5 file during the repack. (PVN - 2008/08/26)
- - h5repack: add 2 options that call H5Pset_alignment in the repacked file. (PVN - 2008/08/29)
- - h5ls: added capability to traverse through external links when the -r
- (recursive) flag is given. (NAF - 2008/09/16)
- - h5ls: added -E option to enable traversal of external links. h5ls will
- not traverse external links without this flag being set.
- (NAF - 2008/10/06)
- - h5diff: added support for long double (PVN - 2008/10/28)
- - h5dump: binary output defaults to NATIVE with -b optionally accepting
- the form of binary output (NATIVE, FILE, BE, LE). (PVN - 2008/10/30)
- - h5diff: return 1 for file differences when both file graphs differ by any object.
- Error return code was changed to 2 from -1. (PVN - 2008/10/30)
- - h5import: TEXTFPE (scientific format) was deprecated. Use TEXTFP
- instead (PVN - 2008/10/30)
- - h5repack: When user doesn't specify a chunk size, h5repack now defines a default
- chunk size as the same size of the size of the hyperslab used to read the chunks.
- The size of the hyperslabs are defined as the size of each dimension or a
- predefined constant, whatever is smaller. This assures that the chunk
- read fits in the chunk cache. (PVN - 2008/11/21)
- - h5diff: h5diff treats two INFINITY values different. Fixed by checking (value==expect)
- before call ABS(...) at h5diff_array.c This will make that (INF==INF) is true
- (INF is treated as an number instead of NaN) (PC -- 2009/07/28)
- - h5diff: add option "--use-system-epsilon" to print difference if (|a-b| > EPSILON)
- Change default to use strict equality (PC -- 2009/09/12)
-
+ -
High-Level APIs:
---------------
- C Packet Table API
- ------------------
- - Replacement of a public function
-
- The existing function H5PTcreate_fl limits applications to deflate
- compression only. The public function H5PTcreate is added to replace
- H5PTcreate_fl. H5PTcreate takes a property list ID to provide
- flexibility on creation properties.
-
- hid_t H5PTcreate(hid_t loc_id, const char *dset_name,
- hid_t dtype_id, hsize_t chunk_size, hid_t plist_id);
- (BMR, 2016/03/04, HDFFV-8623)
-
- - New public functions
-
- Two accessor functions were added per HDFFV-8623/patch 003.
- /* Returns the ID of the dataset associated with the packet table */
- hid_t H5PTget_dataset(hid_t table_id);
-
- /* Returns the ID of the datatype the packet table uses */
- hid_t H5PTget_type(hid_t table_id);
- (BMR, 2016/03/04, HDFFV-8623)
-
- - Regarding #ifdef VLPT_REMOVED
-
- The #ifdef VLPT_REMOVED blocks are removed from the PT library source
- except the following cases:
- + H5PTis_varlen() is made available again.
- + H5PTfree_vlen_readbuff() now became H5PTfree_vlen_buff()
- (BMR, 2016/03/04, HDFFV-442)
-
- C++ Packet Table API
- --------------------
- - New constructor
-
- An overloaded constructor is added to FL_PacketTable and takes a property
- list ID to provide flexibility on creation properties.
-
- FL_PacketTable(hid_t fileID, hid_t plist_id, const char* name, hid_t dtypeID, hsize_t chunkSize);
- (BMR, 2016/03/08, HDFFV-8623)
-
- - New public functions
-
- Two accessor wrappers to class PacketTable, per HDFFV-8623/patch 004.
- /* Returns the ID of the dataset associated with the packet table */
- hid_t PacketTable::GetDataset()
-
- /* Returns the ID of the datatype the packet table uses */
- hid_t PacketTable::GetDataset()
- (BMR, 2016/03/04, HDFFV-8623)
-
- - Member functions having "char*" as an argument
-
- Overloaded functions were added to provide "const char*" argument, the
- existing version will be deprecated.
- (BMR, 2016/03/04)
-
- - Regarding #ifdef VLPT_REMOVED
-
- The #ifdef VLPT_REMOVED blocks are removed from the PT library source
- except the following cases:
- + VL_PacketTable::IsVariableLength() is moved to PacketTable
- + VL_PacketTable::FreeReadBuff() now became PacketTable::FreeBuff()
-
- (BMR, 2016/03/04, HDFFV-442)
-
-
- Internal header file
- --------------------
- - A new API function H5DOwrite_chunk. It writes a data chunk directly
- into a file bypassing hyperslab selection, data conversion, and
- filter pipeline. The user must be careful with the function and
- clearly understand the I/O process of the library.
- (SLU - 2013/2/11)
- - New API: h5ltpath_valid (Fortran: h5ltpath_valid_f) which checks
- if a path is correct and determines if a link resolves to a valid
- object and checks that the link does not dangle. (MSB- 2012/3/15)
-
- - Added Fortran wrappers for Dimension Scale APIs. HDFFV-3797
- h5dsset_scale_f
- h5dsattach_scale_f
- h5dsdetach_scale_f
- h5dsis_attached_f
- h5dsis_scale_f
- h5dsset_label_f
- h5dsget_label_f
- h5dsget_scale_name_f
- h5dsget_num_scales_f
- (EIP for SB - 2011/10/13)
-
- - Table: In version 3.0 of Table, "NROWS" (used to store number of records) was
- deprecated (PVN - 2008/11/24)
+ C Packet Table API
+ ------------------
+ -
+ Internal header file
+ --------------------
+ -
+
Documentation
-------------
Support for new platforms, languages and compilers.
=======================================
- - Intel V11.1 uses now -O3 optimization in production mode (EIP - 2010/10/08)
- - PathScale compilers are recognized and can build the HDF5 library
- properly. AKC - 2009/7/28 -
- - SunOS 5.11 (emu) 32-bit and 64-bit with Sun C/C++ 5.12 compiler and
- Sun Fortran 95 8.6 compiler. (SLU - 2013/04/15)
+ -
-Bug Fixes since HDF5-1.8.0 release
+Bug Fixes since HDF5-1.10.0-patch1 release
==================================
Library
-------
- - Fixed a memory bug that could occur when a message was improperly marked
- as sharable on disk.
-
- (NAF, 2016/07/01, HDFFV-9950)
-
- - Incorrect usage of list in CMake COMPILE_DEFINITIONS set_property
-
- The CMake command, set_property with COMPILE_DEFINITIONS property
- needs a quoted semi-colon separated list of values. CMake will
- transform the list to a series of -D{value} for the compile.
-
- (ADB - 2014/12/09, HDFV-9041)
-
- - H5Z.c: H5Zfilter_avail(H5Z_filter_t id)
- Added else block if the call to the internal H5Z_filter_avail(id) does not
- fail and returns FALSE. This block calls the H5PL_load(H5PL_TYPE_FILTER, (int)id)
- function to attempt to dynamically load the filter plugin.
- (ADB - 2014/03/03 HDFFV-8629)
- - Added const qualifier to source buffer parameters in H5Dgather and
- H5D_scatter_func_t (H5Dscatter callback). (NAF - 2013/7/02)
- - Fixed an error involving failure to write fill values to the user's
- buffer when reading unallocated chunks from datasets that have a
- fill value set to H5D_FILL_VALUE_DEFAULT. A consequence of this
- was the reporting of spurious data values in h5dump and h5diff
- output.
- (HDFFV-8247; JP - 2013/05/03)
- - Fixed an error that could occur when calling H5Ocopy within an
- H5Literate callback (and possibly other situations).
- (NAF - 2012/7/25 - HDFFV-5853)
- - Fixed an error that would occur when copying an object with attribute
- creation order tracked and indexed. (NAF - 2012/3/28 - HDFFV-7762)
- - Fixed a bug in H5Ocopy(): When copying an opened object, call the
- object's flush class action to ensure that cached data is flushed
- so that H5Ocopy will get the correct data.
- (VC - 2012/3/27 - HDFFV-7853)
- - When an application tries to write or read many small data chunks and
- runs out of memory, the library had a seg fault. The fix is to
- return the error stack with proper information. (SLU - 2012/3/23.
- Issue 7785)
- - H5Pset_data_transform had seg fault in some cases like x*-100. It
- works correctly now and handles other cases like 100-x or 2/x.
- (SLU - 2012/3/15. Issue 7922)
- - Fixed rare corruption bugs that could occur when using the new object
- header format. (NAF - 2012/3/15 - HDFFV-7879)
- - Creating a dataset in a read-only file caused seg fault when the file
- is closed. It's fixed. The attemp to create a dataset will fail
- with the error stack indicating the file is read-only. (SLU -
- 2012/1/25. Issue 7756)
- - Fixed a seg fault that could occur when shrinking a dataset with chunks
- larger than 1 MB. (NAF - 2011/11/30 - HDFFV-7833)
- - Fixed a bug that could cause file corruption when copying named
- datatypes to a file using shared messages. (NAF - 2011/11/14)
- - Fixed a bug that could cause H5Oget_info to return the wrong address
- after copying a named datatype. (NAF - 2011/11/14)
- - The library allowed the conversion of strings between ASCII and UTF8
- (Issue 7582). We have corrected it to report an error under this
- situation. (SLU - 2011/11/8)
- - The library had seg fault when it tried to shrink the size of compound type
- through H5Tset_size immediately after the type was created (Issue
- 7618). It's fixed now. (SLU - 2011/10/26)
- - Fixed a bug that occurred when using H5Ocopy on a committed datatype
- containing an attribute using that committed datatype.
- (NAF - 2011/10/13 - Issue 5854)
- - #ifdef _WIN32 instances changed to #ifdef H5_HAVE_WIN32_API and added
- H5_HAVE_VISUAL_STUDIO checks where necessary. CMake only as configure
- never set _WIN32.
- - CLANG compiler with the options -fcatch-undefined-behavior and -ftrapv
- discovered 3 problems in tests and tools' library (Issue 7674):
- 1. In dsets.c, left shifting an unsigned int for 32 bits or more
- caused undefined behavior.
- 2. In dt_arith.c, the INIT_INTEGER macro definition has an overflow
- when the value is negative minimal and is being subtracted one.
- 3. In tools/lib/h5tools_str.c, right shifting an int value for 32 bits
- or more caused undefined behavior.
- All the problems have been corrected. (SLU - 2011/9/2)
- - In v1.6 library, there was EOA for the whole MULTI file saved in the
- super block. We took it out in v1.8 library because it's meaningless
- for the MULTI file. v1.8 library saves the EOA for the metadata file,
- instead. But this caused some backward compatibility problem.
- v1.8 library couldn't open the file created with v1.6 library. We
- fixed the problem by checking the EOA value to detect the file
- created with v1.6 library. (SLU - 2011/6/22)
- - When a dataset had filters and reading data failed, the error message
- didn't say which filter isn't registered. It's fixed now.
- (SLU - 2011/6/3)
- - The datatype handler created with H5Tencode/decode used to have the
- reference count 0 (zero). I have fixed it. It is 1 (one) now.
- (SLU - 2011/2/18)
- - Fixed a bug that caused big endian machines to generate corrupt files
- when using the scale-offset filter with floating point data or
- fill values. Note that such datasets will no longer be readable
- by any machine after this patch. (NAF - 2010/02/02 - Bug 2131)
- - Retrieving a link's name by index in the case where the link is
- external and the file that the link refers to doesn't exist will
- now fail gracefully rather than cause a segmentation fault.
- (MAM - 2010/11/17)
- - Modified library to always cache symbol table information. Libraries
- version 1.6.3 have a bug which causes them to require this
- information for some operations. (NAF - 2010/09/21 - 1864)
- - Fixed a bug that could occur when getting information for a new-style
- group that was previously opened through a file handle that was
- later closed. (NAF - 2010/09/15)
- - Added define check in H5public.h if stdint.h is supported by the C++
- compiler. This define is only available on Windows with VS2010 and
- using CMake to build the library. (ADB - 2010/09/13 - Bug 1938)
- - H5Eset_current_stack now also closes the error stack to be set as the
- default. This is to avoid a potential problem (Bug 1799).
- (SLU - 2010/9/7)
- - Fixed the bug in the filter's public CAN_APPLY function. The return
- value should be htri_t not herr_t (Bug #1239). (SLU - 2010/8/5)
- - Fixed a bug in the direct I/O driver that could render files with
- certain kinds of unaligned data unreadable or corrupt them.
- (NAF - 2010/07/28)
- - valgrind reported an error of copying data to itself when a new attribute
- is written (Bug #1956). I fixed it by taking out the memcpy step in
- the attribute code. (SLU - 2010/07/28)
- - Fixed a bug that could cause file corruption when using non-default
- sizes of addresses and/or lengths. This bug could also cause
- uncorrupted files with this property to be unreadable. This bug
- was introduced in 1.8.5. (NAF - 2010/07/16 - 1951)
- - Fixed a file corruption bug that could happen when shrinking a
- compressed dataset. (NAF - 2010/05/20)
- - Fixed some memory leaks in VL datatype conversion when strings are
- used as fill values. (MAM - 2010/05/12 - BZ# 1826)
- - Fixed a bug when copying objects with NULL references with the
- H5O_COPY_EXPAND_REFERENCE_FLAG flag set. (NAF - 2010/04/08 - 1815)
- - Files can now be concurrently opened more than once using the core file
- driver, as long as the backing store is used. (NAF - 2010/03/09)
- - Added support for H5O_COPY_EXPAND_EXT_LINK_FLAG to H5Ocopy. External
- links will now be expanded if this flag is set.
- (NAF - 2010/03/05 - 1733)
- - Fixed a bug where the library, when traversing an external link, would
- reopen the source file if nothing else worked. (NAF - 2010/03/05)
- - Fixed an intermittent bug in the b-tree code which could be triggered
- by expanding and shrinking chunked datasets in certain ways.
- (NAF - 2010/02/16)
- - H5Tdetect_class said a VL string is a string type. But when it's
- in a compound type, it said it's a VL type (Bug #1584). I fixed it
- to be consistent. It always return string type. (SLU - 2009/12/10)
- - Fixed a bug where writing and deleting many global heap objects (i.e.
- variable length data) would render the file unreadable. Previously
- created files exhibiting this problem should now be readable.
- (NAF - 2009/10/27 - 1483)
- - Fixed incorrect return value for H5Pget_preserve. (AKC - 2009/10/08 - 1628)
- - Fixed an assertion failure that occurred when H5Ocopy was called on a
- dataset using a vlen inside a compound. (NAF - 2009/10/02 - 1597)
- - Fixed incorrect return value for H5Pget_filter_by_id1/2 in H5Ppublic.h.
- (NAF - 2009/09/25 - 1620)
- - Fixed a bug where properties weren't being compared with the registered
- compare callback. (NAF - 2009/09/25 - 1555)
- - Fixed a bug where H5Pget_fitler_by_id would succeed when called for a
- filter that wasn't present. (NAF - 2009/06/25 - 1250)
- - Fixed an issue with committed compound datatypes containing a vlen.
- Also fixed memory leaks involving committed datatypes.
- (NAF - 2009/06/10 - 1593)
- - Added versioning to H5Z_class_t struct to allow compatibility with 1.6
- API. (NAF - 2009/04/20 - 1533)
- - Fixed a problem with using data transforms with non-native types in the
- file. (NAF - 2009/04/20 - 1548)
- - Added direct.h include file to windows section of H5private.h
- to fix _getcwd() warning. (ADB - 2009/04/14 - 1536)
- - Fixed a bug that prevented external links from working after calling
- H5close(). (NAF - 2009/04/10 - 1539)
- - Modified library to write cached symbol table information to the
- superblock, to allow library versions 1.3.0 to 1.6.3 to read files
- created by this version. (NAF - 2009/04/08 - 1423)
- - Changed skip lists to use a deterministic algorithm. The library should
- now never call rand() or srand(). (NAF - 2009/04/08 - 503)
- - Fixed a bug where H5Lcopy and H5Lmove wouldn't create intermediate
- groups when that property was set. (NAF - 2009/04/07 - 1526)
- - Fixed a bug that caused files with a user block to grow by the size of
- the user block every time they were opened.
- (NAF - 2009/03/26 - 1499)
- - Fixed a rare problem that could occur with files using the old (pre 1.4)
- array datatype. (NAF - 2009/03/23)
- - Modified library to be able to open files with corrupt root group symbol
- table messages, and correct these errors if they are found. Such
- files can only be successfully opened with write access.
- (NAF - 2009/03/23 - 1189)
- - Removed the long_long #define and replaced all instances with
- "long long". This caused problems with third party products. All
- currently supported compliers support the type. (ADB - 2009/03/05)
- - Fixed various bugs that could prevent the fill value from being written
- in certain rare cases. (NAF - 2009/02/26 - 1469)
- - Fixed a bug that prevented more than one dataset chunk from being cached
- at a time. (NAF - 2009/02/12 - 1015)
- - Fixed an assertion failure caused by opening an attribute multiple times
- through multiple file handles. (NAF - 2009/02/12 - 1420)
- - Fixed a problem that could prevent the user from adding attributes (or
- any object header message) in some circumstances.
- (NAF - 2009/02/12 - 1427)
- - Fixed a bug that could cause problems when an attribute was added to a
- committed datatype using the committed datatype's datatype.
- (NAF - 2009/02/12)
- - Fixed a bug that could cause problems when copying an object with a
- shared message in its own object header. (NAF - 2009/01/29)
- - Changed H5Tset_order to properly reject H5T_ORDER_NONE for most
- datatypes. (NAF - 2009/01/27 - 1443)
- - Fixed a bug where H5Tpack wouldn't remove trailing space from an
- otherwise packed compound type. (NAF - 2009/01/14)
- - Fixed up some old v2 btree assertions that get run in debug mode that
- were previously failing on compilation, and removed some of the
- more heavily outdated and non-rewritable ones. (MAM - 2008/12/15)
- - Fixed a bug that could cause problems when "automatically" unmounting
- multiple files. (NAF - 2008/11/17)
- - H5Ovisit and H5Ovisit_by_name will now properly terminate when the
- callback function returns a positive value on the starting object.
- (NAF - 2008/11/03)
- - Fixed an error where a null message could be created that was larger
- than could be written to the file. (NAF - 2008/10/23)
- - Corrected error with family/split/multi VFD not updating driver info
- when "latest" version of the file format used. (QAK - 2008/10/14)
- - Corrected alignment+threshold errors to work correctly when metadata
- aggregation is enabled. (QAK - 2008/10/06)
- - Changed H5Fget_obj_count and H5Fget_obj_ids to ignore objects registered
- by the library for internal library use. (NAF - 2008/10/06)
- - Fixed potential memory leak during compound conversion.
- (NAF - 2008/10/06)
- - Changed the return value of H5Fget_obj_count from INT to SSIZE_T. Also
- changed the return value of H5Fget_obj_ids from HERR_T to SSIZE_T and
- the type of the parameter MAX_OBJS from INT to SIZE_T. (SLU - 2008/09/26)
- - Fixed an issue that could cause data to be improperly overwritten
- during compound type conversion. (NAF - 2008/09/19)
- - Fixed pointer alignment violations that could occur during vlen
- conversion. (NAF - 2008/09/16)
- - Fixed problem where library could cause a segmentation fault when
- an invalid location ID was given to H5Giterate(). (QAK - 2008/08/19)
- - Fixed improper shutdown when objects have reference count > 1. The
- library now tracks reference count due to the application separately
- from that due to internal library routines. (NAF - 2008/08/19)
- - Fixed assertion failure caused by incorrect array datatype version.
- (NAF - 2008/08/08)
- - Fixed an issue where mount point traversal would fail when using
- multiple handles for the child. (NAF - 2008/08/07)
- - Fixed an issue where mount points were inaccessible when using multiple
- file handles for the parent. The mount table is now in the shared
- file structure (the parent pointer is still in the top structure).
- (NAF - 2008/08/07)
- - when an attribute was opened twice and data was written with one of the handles,
- the file didn't have the data. It happened because each handle had its own
- object structure, and the empty one overwrote the data with fill value. This is
- fixed by making some attribute information like the data be shared in the
- attribute structure. SLU - 2008/07/22
- - Fixed issue where a group could have a file mounted on it twice.
- (QAK - 2008/07/15)
- - Fixed a Windows-specific issue in the ohdr test which was causing users
- in some timezones to get false errors. This a deficiency in the Windows
- mktime() function, and has been handled properly. SJW - 2008/06/19
- - Fixed the problem with the searching of target file for H5Lcreate_external().
- The searching pattern will depend on whether the target file's
- pathname is an absolute or a relative path. Please see the description
- in the RM for H5Lcreate_external(). (VC - 2008/04/08)
- - Fixed possible file corruption bug when encoding datatype
- descriptions for compound datatypes whose size was between
- 256 & 511 bytes and the file was opened with the "use the
- latest format" property enabled (with H5Pset_libver_bounds).
- (QAK - 2008/03/13)
- - Fixed bug in H5Aget_num_attrs() routine to handle invalid location
- ID correctly. (QAK - 2008/03/11)
- - H5Dset_extent: when shrinking dimensions, some chunks were not deleted.
- (PVN - 2009/01/8)
- - Added code to maintain a min_clean_fraction in the metadata cache when
- in serial mode. (MAM - 2009/01/9)
-
-
+ -
Configuration
-------------
- - CMake: When CMake commands are executed individually on the command line
- and the external filters are being built, the CMAKE_BUILD_TYPE define
- must be set to the same value as the configuration
- (-DCMAKE_BUILD_TYPE:STRING=Release if using -C Release). This is needed
- by the the szip and zlib filter build commands. (ADB - HDFFV-8695)
- - CMake: Remove use of XLATE_UTILITY program. (ADB - 2014/03/28 HDFFV-8640)
- - CMake: Added missing quotes in setting the CMAKE_EXE_LINKER_FLAGS for the
- MPI option. (ADB - 2014/02/27 HDFFV-8674)
- - Modified H5detect.c to scan floating point types for padding bits before
- analyzing the type further. This should fix problems with gcc 4.8
- (NAF - 2013/09/19 - HDFFV-8523/HDFFV-8500)
- - Fixed Makefile issue in which "-Wl," was not properly specified
- prior to -rpath when building parallel fortran libraries with
- an Intel compiler. (MAM - 2012/03/26)
- - Makefiles generated by other packages using h5cc as the compiler
- no longer error when 'make' is invoked more than once in order
- to 'rebuild' after changes to source. (MAM - 2012/03/26)
- - Added --enable-fortran2003 flag to enable Fortran2003 support
- in the HDF5 Fortran library. The flag should be used along with the
- --enable-fortran flag and takes affect only when Fortran compiler
- is Fortran2003 compliant. (EIP - 2011/11/14)
-
- - In Windows platform, the default VFD, was Windows VFD, is restored back
- to the SEC2, aka POSIX, VFD. The Windows VFD is deprecated. HDFFV-7740
- (AKC 2011/09/26)
- - Removed config/ibm-aix6.x. All IBM-AIX settings are in one file,
- ibm-aix. (AKC - 2011/4/14)
- - Shared C libraries are no longer disabled on Mac when Fortran
- is enabled. Shared Fortran libraries are still not supported on Mac,
- so configure will disable them by default, but this is overridable
- with the new --enable-unsupported configure option. The configure
- summary has been updated to reflect the fact that the shared-ness of
- the C++/Fortran wrapper libraries may not align with the C library.
- (MAM - 04/11/2011 - HDFFV-4353).
- - Removed recognition of the parallel compilers of LAM(hcc) and
- ChMPIon(cmpicc) since we have no access to these two MPI implementations
- and cannot verify their correctness. (AKC - 2010/7/14 - Bug 1921)
- - Removed the following config files, as we no longer support them:
- config/dec-osf*, config/hpux11.00, config/irix5.x,
- config/powerpc-ibm-aix4.x config/rs6000-ibm-aix5.x config/unicos*
- MAM - 2009/10/08
- - Modified configure and make process to properly preserve user's CFLAGS
- (and company) environment variables. Build will now properly use
- automake's AM_CFLAGS for any compiler flags set by the configure
- process. Configure will no longer modify CFLAGS directly, nor will
- setting CFLAGS during make completely replace what configure has set up.
- MAM - 2009/10/08
- - Support for TFLOPS, config/intel-osf1, is removed since the TFLOPS
- machine has long retired. AKC - 2009/10/06.
- - Added $(EXEEXT) extension to H5detect when it's executed in the
- src/Makfile to generate H5Tinit.c so it works correctly on platforms
- that require the full extension when running executables.
- MAM - 2009/10/01 - BZ #1613
- - Configure will now set FC and CXX to "no" when fortran and c++
- are not being compiled, respectively, so configure will not run
- some of the compiler tests for these languages when they are not
- being used. MAM - 2009/10/01
- - The PathScale compiler (v3.2) was mistaken as gcc v4.2.0 but it fails to
- recognize some gcc options. Fixed. (see bug 1301). AKC - 2009/7/28 -
- - The --enable-static-exec flag will now properly place the -static flag
- on the link line of all installed executables. This will force the
- executable to link with static libraries over shared libraries, provided
- the static libraries are available. MAM - 2009/08/31 - BZ #1583
- - The --includedir=DIR configuration option now works as intended, and can
- be used to specify the location to install C header files. The default
- location remains unchanged, residing at ${prefix}/include.
- MAM - 2009/03/10 - BZ #1381
- - Configure no longer removes the '-g' flag from CFLAGS when in production
- mode if it has been explicitly set in the CFLAGS environment variable
- prior to configuration. MAM - 2009/03/09 - BZ #1401.
- - Fixed error with 'make check install' failing due to h5dump
- needing other tools built first. MAM - 2008/10/24.
- - Wpen using shared szip, it is no longer necessary to specify
- the path to the shared szip libraries in LD_LIBRARY_PATH. MAM -
- 2008/10/24.
- - The file libhdf5_fortran.settings is not installed since its content
- is included in libhdf5.settings now. AKC - 2008/10/21
- - "make DESTDIR=xxx install" failed to install some tools and files
- (e.g., h5cc and fortran modules). Fixed. AKC - 2008/10/8.
- - Autotools: An export of LD_LIBRARY_PATH=<szip library location> was
- removed from configure and make installcheck was revised to run
- scripts installed in share/hdf5_examples to use the installed h5cc, etc.
- to compile and run example source files also installed there. Make
- installcheck will now fail when a shared szip or other external lib file
- cannot be found in the same manner that executables compiled and linked
- with h5cc will fail to run when those lib files cannot be found after
- install. Make installcheck should pass after setting LD_LIBRARY_PATH to the
- szip location.
- (LRK - 2014/04/16)
+ -
Performance
-------------
- - Removed program perform/benchpar from the enable-build-all list. The
- program will be retired or moved to another location. HDFFV-8156
- (AKC 2012/10/01)
- - Retired program perform/mpi-perf. Its purpose has been incorporated
- into h5perf before. (AKC 2012/09/20)
- - ifdefs added to tests around include unistd.h and function to simulate
- getlogin() on Windows.
- (ADB - 2011/08/15)
- - perf_serial test added to Windows projects and check batch file.
- (ADB - 2009/06/11)
+ -
+
Fortran
--------
- - Fixed a typo in return value of the nh5dread_f_c function ( was 1
- instead of 0 on success); fixed the return value to make it consistent
- with other Fortran functions; cleaned the code from debug statements.
- (EIP - 2012/06/23)
-
- - Fixed problem writing/reading control characters to a dataset; writing
- a string containing: alerts, backspace, carriage_return, form_feed,
- horizontal_tab, vertical_tab, new_line is now tested and working.
- (MSB - 2012/09/01)
-
- - Corrected the integer type of H5S_UNLIMITED_F to HSIZE_T (MSB - 2012/09/01)
-
- - Corrected the number of continuation lines in the src files
- to be less then 32 lines for F95 compliance. (MSB - 2012/10/01)
+ -
Tools
-----
- - h5dump subsetting fixed for dims greater then two
- When a dataset has more then two dimensions, subsetting would incorrectly
- calculate the data that needed to be displayed.
- Added in block and stride calculation that account for dimensions greater
- then two. NOTE: lines that have line breaks inserted because of display
- length calculations, may have index info that is incorrect until the next
- dimension break. (ADB, 2016/03/04, HDFFV-9698)
- - h5repack: h5repack would not attempt to remove UD filters. Added a
- check to h5repack for UD filters that checks if the filter can
- be dynamically loaded. This will require a change in the library to
- add the H5PL_load() to the H5Zfilter_avail(). (ADB - 2014/03/03 HDFFV-8629)
- - h5repack: Fixed failure for converting a layout of small chunked dataset
- (size < 1K) to contiguous layout. HDFFV-8214 (JKM 2013/03/18)
- - h5diff: Fixed to return correct exit code 1 when detect unique extra
- attribute. Prior to this fix, h5diff returned exit code 0 indicating
- two files are identical. HDFFV-7643 (JKM 2013/02/15)
- - h5diff: Improved speed when comparing HDF5 files with lots of
- attributes. Much slower performance was identified with release
- version from 1.8.7 to 1.8.10 compared to 1.8.6. (JKM 2012/10/19)
- - h5repack: "h5repack -f NONE file1.h5 out.h5" command failed if
- source file contains chunked dataset and a chunk dim is bigger than
- the dataset dim. Another issue is that the command changed max dims
- if chunk dim is smaller than the dataset dim.
- These issue occurred when dataset size is smaller than 64k (compact
- size limit) Fixed both.
- HDFFV-8012 (JKM 2012/09/24)
- - h5diff: Fixed not to accumulate attribute difference to dataset
- difference in verbose mode (-v, -r), which caused incorrect
- difference between dataset and group/datatype object if attribute
- exist with any differences. This also lead to fix inconsistent
- format indicating difference between dataset and group/datatype
- object. HDFFV-5919 (JKM 2012/09/05)
- - h5diff: Fixed the incorrect result when comparing attribute data
- values and the data type has same class but different size.
- HDFFV-7942 (JKM 2012/08/15)
- - ph5diff: Fixed intermittent hang issue on a certain operation in
- parallel mode. It was detected by daily test for comparing
- non-comparable objects, but it could have occurred in other
- operations depend on machine condition. HDFFV-8003 (JKM 2012/08/01)
- - h5diff: Fixed test failure for "make check" due to failure of
- copying test files when performed in HDF5 source tree. Also applied
- to other tools.
- HDFFV-8107 (JKM 2012/08/01)
- - h5diff: Fixed the Function COPY_TESTFILES_TO_TESTDIR() of
- testh5diff.sh to better report when there is an error in the file
- copying. HDFFV-8105 (AKC -2012/07/22)
- - h5diff: Fixed not to check and display dangling link status without
- --follow-symlinks option. This also improved performance when
- comparing lots of external links without the --follow-symlinks
- option. HDFFV-7998 (JKM 2012/04/26)
- - h5unjam: Fixed sefgault when used -V (show version) option.
- HDFFV-8001 (JKM 2012/04/19)
- - h5repack: Fixed a failure when change the chunk size of a specified
- chunked dataset with unlimited max dims. HDFFV-7993 (JKM 2012/04/11)
- - h5diff: Fixed failure for comparing same named object with different
- object types in comparing groups. Prior to the fix, h5diff resulted
- in error. After the fix, h5diff detects such case as non-comparable
- and display messages accordingly. HDFFV-7664 (JKM 2012/03/28)
- - h5diff: If unique objects exists only in one file and try to exclude
- the unique objects with --exclude-path option, h5diff missed
- excluding some objects.
- Fixed to exclude objects correctly in such case.
- HDFFV-7837 (JKM 2012/03/20)
- - h5dump: Added tools library error stack to properly catch error
- information generated within the library.
- HDFFV-7958 (ADB 2012/03/12)
- - h5dump: Dangling links no longer throw error message, change process
- when open link fails.
- HDFFV-7839 (ADB 2012/03/12)
- - h5diff: When two symbolic dangling links are compared with
- --follow-symlinks option, the result should be same. It worked for
- comparing two files, but didn't work for comparing two objects.
- HDFFV-7835 (JKM 2012/03/09)
- - h5dump: Refactored code to remove duplicated functions. Split XML
- functions from DDL functions. Corrected indentation and formatting
- errors. Also fixed subsetting counting overflow (HDFFV-5874). Verified
- all tools call tools_init() in main.
- HDFFV-7560 (ADB 2012/02/17)
- - h5diff: fixed to prevent from displaying error stack message when
- comparing the two dangling symlinks with follow-symlinks option.
- HDFFV-7836 (JKM 2012/01/13)
- - h5repack: fixed memory leak for handling variable length string in
- attribute. HDFFV-7840 (JKM 2012/01/06)
- - h5ls: fixed segfault when access region reference data in an
- attribute. HDFFV-7838 (JKM 2011/12/29)
- - h5diff: fixed segfault over non-comparable attribute with different
- dimention or rank, along with '-c' option to display details.
- HDFFV-7770 (JKM 2011/10/24)
- - Fixed h5diff to display all the comparable object and attribute
- regardless of non-comparables. HDFFV-7693 (JKM 2011/09/16)
- - Fixed h5repack to update values of references(object and region) of
- attributes in h5repack for 1) references, 2) ARRAY of references,
- 3) VLEN of references, and 4) COMPOUND of references.
- (JIRA HDF5 5932) PC -2011/09/14
- - h5diff: fixed segfault over dataset with container types
- (array,lven) with multiple nested compound types.
- (ex: compound->array->compound, compound->vlen->compound)
- HDFFV-7712 JKM (2011/09/01)
- - h5repack: added macro to handle failure in H5Dread/write when memory
- allocation failed inside the library. (PC -- 2011/08/19)
- - Fixed h5jam not to allow specifying an HDF5 formatted file as input
- file for -u (user block file) option, because the original HDF5 file
- will not be accessible if allows. HDFFV-5941 (JKM 2011/08/15)
- - Revised command help pages of h5jam and h5unjam. The descriptions
- were not up to date and some were missing.
- HDFFV-7515 (JKM 2011/08/15)
- - h5repack: h5repack failed to copy dataset if the layout is changed
- from chunked with unlimited dims to contiguous. HDFFV-7649
- (PC -- 2011/07/15)
- - h5diff: "--delta" option considers two NaN of the same type are
- different, which is wrong based on h5diff description in Reference
- Manual. HDFFV-7656 (PC -- 2011/07/15)
- - Fixed h5diff to display instructive error message and exit with 1
- when mutually exclusive options (-d, -p and --use-system-epsilon)
- are used together. HDFFV-7600 (JKM 2011/07/07)
- - Fixed h5dump to display the first line of each element into correct
- position for multiple dimention array type.
- Before this fix, the first line of each element in array were
- displayed after the last line of previous element without
- moving to the next line (+indentation).
- Bug #HDFFV-5878 (JKM 2011/06/15)
- - Fixed h5dump to display correct value for H5T_STD_I8LE dataset
- on a system (ppc64, linux, Big-Endian, clustering).
- Bug #HDFFV-7594 (ABERT & JKM 2011/05/12)
- - Fixed h5diff to compare file itself correctly. Previously h5diff
- reported either different or not compatible in certain cases even
- comparing file itself. This fix also improve performance when
- comparing same target objects through verifying the obj&file
- addresses before comparing the details in the objects (ex: datasets
- or attributes) Bug #HDFFV-5928 (XCAO & JKM 2011/05/06)
- - Updated h5dump test case script to prevent entire test failure upon
- source directory is read-only. Bug# HDFFV-4342 (JKM 2011/4/12)
- - Fixed h5dump displaying incorrect values for H5T_STD_I8BE type data in
- attribute on Big-Endian machine. H5T_STD_I8BE is unsigned 8bit type,
- so h5dump is supposed to display -2 instead of 254. It worked
- correctly on Little-Endian system , but not on Big-Endian system.
- Bug #HDFFV-4358 (JKM 2011/04/08)
- - Updated to unify option name to '--enable-error-stack' for printing
- HDF5 error stack messages for HDF5 tools. h5ls and h5dump for now.
- For h5ls, this replaces "-e/--errors" option, which is deprecated.
- Bug#2182 (JKM 2011/3/30)
- - Fix h5diff for --use-system-epsilon option: the calculation changed
- from ( |a - b| / b ) to ( |a - b| ). This was decided for better
- performance. Bug#2184 (JKM 2011/3/24)
- - Fixed output for H5T_REFERENCE in h5dump. According to the BNF document
- the output of a H5T_REFERENCE should be followed by the type;
- <reference> ::= H5T_REFERENCE { <ref_type> }
- <ref_type> ::= H5T_STD_REF_OBJECT | H5T_STD_REF_DSETREG
- Previously this was only displayed if the -R option was used.
- Bug#1725 (ADB 2011/3/28)
- - Fix h5diff issues for #1: h5diff compared attributes correctly only
- when two objects have the same number of attributes and attribute
- names are identical, #2: didn't display useful information about
- attribute difference. Bug#2121 (JKM 2011/3/17)
- - Fixed memory leak for h5diff when accessing symbolic links with
- --follow-symlink option. Bug#2214 (JKM 2011/3/18)
- - Fixed memory leak for h5diff when access variable length string
- data. Bug#2216 (JKM 2011/3/18)
- - Fixed and improved help page for -a option of h5ls.
- Bug#1904 (JKM 2011/3/11)
- - Fixed h5dump not to include attribute values in the output file when
- h5dump "-y -o output_file" options were used. The problem was introduced
- in HDF5 1.8.6 by showing data pointed by region references. (XCAO 2011/3/9)
- - Fixed h5copy to be able to copy any object into the same HDF5 file.
- Previously h5copy displayed error message when target file is same
- as source file. (XCAO 2011/3/8)
- - Fixed h5dump for skipping some values for long array type dataset on
- Windows. This issue only occurred on Windows due to the different
- return behavior from _vsnprintf() funtion. Bug#2161 (JKM 2011/3/3)
- - Fixed h5dump for skipping array indices every certain number
- when the array type dataset is relatively big. The certain number
- varies according to the size of array. Bug#2092 (JKM 2011/2/15).
- - Fixed h5diff for the segfault when compares compound datasets
- with combination of fixed length string types and vlen string types
- in certain orders. bug#2089 (JKM 2010/12/28)
- - Improve h5diff performance. 1) use HDmemcmp() before comparing each
- elements. 2) replace expensive H5Tequals() calls 3) retrieve datatype
- information at dataset level not each element level for compound
- datasets
- - Fixed h5ls to display nested compound type with curly bracket
- when -S (--simple) option is used with -l (--label), so it shows
- which member (in curly bracket) belong to which nested compound type
- and make the output make sense. bug#1979 (JKM 2010/11/09)
- - Fixed h5diff to handle variable-length strings in a compound dataset
- correctly. (also variable-length string array in a compound dataset)
- Garbage values were displayed when h5diff compared multiple
- variable-length strings in a compound type dataset.
- Bug#1989 (JKM 2010/10/28)
- - Fixed h5copy to fail gracefully when copying object to non-exist
- group without -p option. Bug#2040 (JKM 2010/10/18)
- - Fixed to compare member objects and groups recursively when two
- files or groups are specified to be compared. Bug#1975
- (JKM 2010/9/16)
- - Make h5repack be able to convert a layout to COMPACT for small size
- dataset as default. bug#1896 (JKM 2010/09/15)
- - Change h5ls not to manipulate special characters in object name or
- attribute name for smart display. bug#1784 (JKM 2010/06/28)
- - Fixed h5ls to return exit code 1 (error) when non-existent file is
- specified. bug#1793. (JKM 2010/04/27)
- - h5copy failed to copy dangling link when the link is specified
- directly. bug#1817. (JKM 2010/04/22)
- - h5repack lost attributes from a dataset of reference type. bug#1726.
- (JKM 2010/3/25)
- - h5repack sets NULL for object reference value for group or
- named datatype. bug#1814. (JKM 2010/03/19)
- - h5diff: fixed incorrect behavior (hang) in parallel mode when
- specify invalid options (ex: -v and -q) (JKM 2010/02/17)
- - h5dump/h5ls display buffer resize fixed in tools library.
- (ADB - 2009/07/21 - 1520)
- - Fixed many problems that could occur when using h5repack with named
- datatypes. (NAF - 2009/4/20 - 1516/1466)
- - h5dump, h5diff, h5repack were not reading (by hyperslabs) datasets
- that have a datatype datum size greater than H5TOOLS_BUFSIZE, a
- constant defined as 1024Kb, such as array types with large
- dimensions (PVN - 2009/4/1 - 1501)
- - h5import: By selecting a compression type, a big endian byte order was being
- selected (PVN - 2009/3/11 - 1462)
- - zip_perf.c had missing argument on one of the open() calls. Fixed.
- (AKC - 2008/12/9)
- - h5dump now checks for uniqueness of committed datatypes.
- (NAF - 2008/10/15)
- - Fixed unnecessary indentation of committed datatypes in h5dump.
- (NAF - 2008/10/15)
- - Fixed bugs in h5stat:segmemtation fault when printing groups and
- print warning message when traversal of objects is unsuccessful.
- (see bug #1253) (VC- 2008/10/13)
- - Fixed bug in h5ls that prevented relative group listings (like
- "h5ls foo.h5/bar") from working correctly (QAK - 2008/06/03)
- - Fixed bug in h5diff that prevented datasets & attributes with
- variable-length string elements from comparing correctly.
- (QAK - 2008/02/28)
- - h5import bug on Windows w/binary datasets. fread in windows needs a
- binary file to be open with 'rb' instead of 'r' otherwise it
- terminates execution if an end of file character is found on the
- input file. Besides that the binary file generated needs to be open
- with 'wb' , otherwise an end of line character is read twice.
- (PVN - 2008/02/19)
- - Fixed bug in h5dump that caused binary output to be made only for the first
- dataset, when several datasets were requested. (PVN - 2008/04/07)
- - h5dump: when doing binary output (-b), the stdout printing of attributes
- was done incorrectly. Removed printing of attributes when doing binary
- output. PVN - 2008/06/05
-
+ -
High-Level APIs:
- ------
- - Packet Table is updated.
-
- In the Packet Table C API, there are changes with the following functions,
- which had been ifdef'ed out with VLPT_REMOVED since 2006
- * H5PTcreate_vl, is removed from this release
- * H5PTfree_vlen_readbuff, is renamed to H5PTfree_vlen_buff
- * H5PTis_varlen, is made available again
-
- Various cleanup: replacing 0/-1 with SUCCEED/FAIL and H5I_BADID with
- H5I_INVALID_HID. (BMR, 2016/03/04, HDFFV-442)
-
- - Fixed problem with H5DSget_scale_name including the NULL terminator in
- the size calculation returned by the function. The API does not
- include the NULL terminator in the size returned (MSB- 2013/2/10)
-
- - Fixed problem with H5TBdelete_record destroying all data following the deletion
- of a row. (MSB- 2012/7/26)
-
- - Fixed H5LTget_attribute_string not closing an object identifier when an
- error occurs. (MSB- 2012/7/21)
-
- - Fixed the H5LTdtype_to_text function. It had some memory problems when
- dealing with some complicated data types. HDFFVI-7701 (SLU - 2011/10/19)
-
- - Fixed a bug in H5DSattach_scale, H5DSis_attached and H5DSdetach_scale
- caused by using H5Tget_native_type function to determine the native
- type for reading REFERENCE_LIST attribute. The bug was exposed
- on Mac PPC.
- (EIP - 2010/05/22 -1851)
- - Fixed a bug in the H5DSdetach_scale function when 0 bytes
- were allocated after the last reference to a dim. scale
- was removed from the list of references in a VL element of the
- DIMENSION_LIST attribute; modified the function to comply
- with the Spec: DIMENSION_LIST attribute is deleted now when no
- dimension scales left attached.
- (EIP - 2010/05/14 -1822)
- - Fixed a bug where the H5TB API would forget the order of fields when
- added out of offset order. (NAF - 2009/10/27 - 1582)
- - H5DSis_attached failed to account for different platform types. Added a
- get native type call. (ADB - 2009/9/29 - 1562)
- - Dimension scales: The scale index return value in H5DSiterate_scales was not always
- incremented. (PVN - 2009/4/8 - 1538)
+ ------
+ -
Fortran High-Level APIs:
- ------
-
- - Lite: The h5ltget_attribute_string_f used to return the C NULL character in the
- returned character buffer. The returned Fortran charactor buffer now does
- not return the C NULL character. (MSB - 2012/3/23)
- - Lite: The h5ltget_dataset_info_f function (gets information about a dataset)
- was not correctly returning the dimension array. (PVN - 2009/3/23)
- - Lite: the h5ltread_dataset_string_f and h5ltget_attribute_string_f functions
- had memory problems with the g95 fortran compiler. (PVN � 5/13/2009) 1522
-
-
-
-
+ ------
+ -
Documentation
-------------
@@ -1239,93 +132,30 @@ Bug Fixes since HDF5-1.8.0 release
F90 APIs
--------
- - Modified the h5open_f and h5close_f subroutines to not to call H5open
- and H5close correspodningly. While the H5open call just adds overhead,
- the H5close call called by an Fortran application shuts down the HDF5
- library making it unaccessible to the application.
- HDFFV-915 (EIP & SB - 2011/10/13)
+ -
C++ APIs
--------
- - The constructor PropList::PropList(id) was fixed to act properly
- according to the nature of 'id'. When 'id' is a property class id,
- a new property list will be created. When 'id' id a property list id,
- a copy of the property list will be made. (BMR - 2010/5/9)
- - The parameters 'size' and 'bufsize' in CommonFG::getLinkval and
- CommonFG::getComment, respectively, now have default values for
- user's convenience. (BMR - 2009/10/23)
- - NULL pointer accessing was fixed, bugzilla 1061. (BMR - 2009/10/05)
- - read/write methods of DataSet and Attribute classes were fixed
- to handle string correctly. (BMR - 2009/07/26)
- - Fixed bug that caused segfaults in Attribute::read. (BMR - 2008/04/20)
- - Fixed bug in PropList::getClassName to use portable HDfree instead
- of free. (BMR - 2008/04/20)
- - Fixed a design bug which allowed an Attribute object to create/modify
- attributes (bugzilla #1068). The API class hierarchy was revised
- to address the problem. Classes AbstractDS and Attribute are moved
- out of H5Object. Class Attribute now multiply inherits from
- IdComponent and AbstractDs and class DataSet from H5Object and
- AbstractDs. In addition, the data member IdComponent::id was
- moved into subclasses: Attribute, DataSet, DataSpace, DataType,
- H5File, Group, and PropList. (BMR - 2008/08/10)
- - IdComponent::dereference was incorrect and replaced as described
- in "New Features" section.
- (BMR - 2008/08/10)
-
+ -
+
Testing
-------
- - tools/h5diff/testh5diff.sh is run in every "make check", even after it
- has passed in the previous run. It should not run again if there is no
- code changes. Fixed. (AKC - 2013/07/19 HDFFV-8392)
- - In some Mac system, testlibinfo.sh failed with this error:
- Check file ../src/.libs/libhdf5.7.dylib
- strings: object: ../src/.libs/libhdf5.7.dylib malformed object \
- (unknown load command 15)
- The strings command of Mac inspects library files and older
- versions of strings may not know newer library format, resulting
- in errors. Fixed by sending the library file as stdin to the strings
- coommand to avoid this problem. (AKC - 2013/03/08 HDFFV-8305)
-
- - Fixed a typo in the ERROR macro in test/testhdf5.h. It segmentation
- faulted when used before. (AKC - 2013/02/12 HDFFV-8267)
-
+ -
Supported Platforms
===================
- AIX 6.1 xlc 10.1.0.5
- (NASA G-ADA) xlC 10.1.0.5
- xlf90 12.1.0.6
-
- Linux 2.6.18-308.13.1.el5PAE GNU C (gcc), Fortran (gfortran), C++ (g++)
- #1 SMP i686 i686 i386 compilers for 32-bit applications;
- (jam) Version 4.1.2 20080704 (Red Hat 4.1.2-54)
- Version 4.8.2
- PGI C, Fortran, C++ Compilers for 32-bit
- applications;
- Version 13.7-0
- Intel(R) C, C++, Fortran Compiler for 32-bit
- applications;
- Version 14.0.2 (Build 20140120)
-
- Linux 2.6.18-371.6.1.el5 GNU C (gcc), Fortran (gfortran), C++ (g++)
- #1 SMP x86_64 GNU/Linux compilers for 64-bit applications;
- (koala) Version 4.1.2 20080704 (Red Hat 4.1.2-54)
- Version 4.8.2
- Intel(R) C, C++, Fortran Compilers for
- applications running on Intel(R) 64;
- Version 14.0.2 (Build 20140120)
-
- Linux 2.6.32-431.11.2.el6 GNU C (gcc), Fortran (gfortran), C++ (g++)
+
+ Linux 2.6.32-573.22.1.el6 GNU C (gcc), Fortran (gfortran), C++ (g++)
#1 SMP x86_64 GNU/Linux compilers:
- (platypus) Version 4.4.7 20120313
- Version 4.8.2
+ (mayll/platypus) Version 4.4.7 20120313
+ Version 4.8.4
PGI C, Fortran, C++ for 64-bit target on
x86-64;
- Version 13.7-0
+ Version 16.10-0
Intel(R) C (icc), C++ (icpc), Fortran (icc)
compilers:
- Version 14.0.2 (Build 20140120)
+ Version 15.0.3.187 (Build 20150407)
Linux 2.6.32-431.29.2.el6.ppc64 gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-4)
#1 SMP ppc64 GNU/Linux g++ (GCC) 4.4.7 20120313 (Red Hat 4.4.7-4)
@@ -1337,6 +167,15 @@ Supported Platforms
ch5.x86_64 GNU/Linux Version 12.1.5.339
(LLNL Aztec)
+ Linux 3.10.0-327.10.1.el7 GNU C (gcc), Fortran (gfortran), C++ (g++)
+ #1 SMP x86_64 GNU/Linux compilers:
+ (kituo/moohan) Version 4.8.5 20150623 (Red Hat 4.8.5-4)
+ Version 4.9.3, Version 5.2.0
+ Intel(R) C (icc), C++ (icpc), Fortran (icc)
+ compilers:
+ Version 15.0.3.187 Build 20150407
+ MPICH 3.1.4 compiled with GCC 4.9.3
+
IBM Blue Gene/P XL C for Blue Gene/P, bgxlc V9.0
(LLNL uDawn) XL C++ for Blue Gene/P, bgxlC V9.0
XL Fortran for Blue Gene/P, bgxlf90 V11.1
@@ -1345,19 +184,15 @@ Supported Platforms
(emu) Sun Fortran 95 8.6 SunOS_sparc
Sun C++ 5.12 SunOS_sparc
- Windows 7 Visual Studio 2008 (cmake)
- Visual Studio 2010 w/ Intel Fortran 14 (cmake)
- Visual Studio 2012 w/ Intel Fortran 15 (cmake)
+ Windows 7 Visual Studio 2012 w/ Intel Fortran 15 (cmake)
Visual Studio 2013 w/ Intel Fortran 15 (cmake)
- Visual Studio 2015 (cmake)
- Cygwin(CYGWIN_NT-6.1 1.7.34(0.285/5/3) gcc(4.9.2) compiler and gfortran)
+ Visual Studio 2015 w/ Intel Fortran 16 (cmake)
+ Cygwin(CYGWIN_NT-6.1 2.2.1(0.289/5/3) gcc(4.9.3) compiler and gfortran)
(cmake and autotools)
- Windows 7 x64 Visual Studio 2008 (cmake)
- Visual Studio 2010 w/ Intel Fortran 14 (cmake)
- Visual Studio 2012 w/ Intel Fortran 15 (cmake)
+ Windows 7 x64 Visual Studio 2012 w/ Intel Fortran 15 (cmake)
Visual Studio 2013 w/ Intel Fortran 15 (cmake)
- Visual Studio 2015 (cmake)
+ Visual Studio 2015 w/ Intel Fortran 16 (cmake)
Windows 8.1 Visual Studio 2012 w/ Intel Fortran 15 (cmake)
Visual Studio 2013 w/ Intel Fortran 15 (cmake)
@@ -1365,15 +200,27 @@ Supported Platforms
Windows 8.1 x64 Visual Studio 2012 w/ Intel Fortran 15 (cmake)
Visual Studio 2013 w/ Intel Fortran 15 (cmake)
- Mac OS X Lion 10.7.3 gcc i686-apple-darwin11-llvm-gcc-4.2 (GCC) 4.2.1 from Xcode 4.2.1
- 32- and 64-bit g++ i686-apple-darwin11-llvm-g++-4.2 (GCC) 4.2.1 from Xcode 4.2.1
- (duck) gfortran GNU Fortran (GCC) 4.6.2
+ Windows 10 Visual Studio 2013 w/ Intel Fortran 15 (cmake)
+ Windows 10 Visual Studio 2015 w/ Intel Fortran 16 (cmake)
+
+ Windows 10 x64 Visual Studio 2013 w/ Intel Fortran 15 (cmake)
+ Windows 10 x64 Visual Studio 2015 w/ Intel Fortran 16 (cmake)
+
+ Mac OS X Mt. Lion 10.8.5 Apple clang/clang++ version 5.1 from Xcode 5.1
+ 64-bit gfortran GNU Fortran (GCC) 4.8.2
+ (swallow/kite) Intel icc/icpc/ifort version 15.0.3
+
+ Mac OS X Mavericks 10.9.5 Apple clang/clang++ version 6.0 from Xcode 6.2
+ 64-bit gfortran GNU Fortran (GCC) 4.9.2
+ (wren/quail) Intel icc/icpc/ifort version 15.0.3
+
+ Mac OS X Yosemite 10.10.5 Apple clang/clang++ version 6.1 from Xcode 7.0
+ 64-bit gfortran GNU Fortran (GCC) 4.9.2
+ (osx1010dev/osx1010test) Intel icc/icpc/ifort version 15.0.3
- Mac OS X Mountain Lion 10.8.1 cc Apple clang version 4.0 from Xcode 4.5.1
- (owl) c++ Apple clang version 4.0 from Xcode 4.5.1
- gcc i686-apple-darwin11-llvm-gcc-4.2 (GCC) 4.2.1 from Xcode 4.5.1
- g++ i686-apple-darwin11-llvm-g++-4.2 (GCC) 4.2.1 from Xcode 4.5.1
- gfortran GNU Fortran (GCC) 4.6.2
+ Mac OS X El Capitan 10.11.6 Apple clang/clang++ version 7.3.0 from Xcode 7.3
+ 64-bit gfortran GNU Fortran (GCC) 5.2.0
+ (osx1010dev/osx1010test) Intel icc/icpc/ifort version 16.0.2
Tested Configuration Features Summary
@@ -1398,12 +245,13 @@ Windows 7 x64 y y/y n y y y
Windows 7 Cygwin n y/n n y y y
Windows 7 x64 Cygwin n y/n n y y y
Windows 8 y y/y n y y y
-Windows 8 x64 y y/y n y y y
-Mac OS X Lion 10.7.3 32-bit n y/y n y y n
-Mac OS X Lion 10.7.3 64-bit n y/y n y y y
-Mac OS X Mountain Lion 10.8.1 64-bit n y/y n y y y
-Mac OS X Mavericks 10.9.1 64-bit n y/y n y y ?
-AIX 6.1 32- and 64-bit n y/n n y y y
+Windows 8 x64 y y/y n y y y
+Windows 10 y y/y n y y y
+Windows 10 x64 y y/y n y y y
+Mac OS X Mountain Lion 10.8.5 64-bit n y/y n y y y
+Mac OS X Mavericks 10.9.5 64-bit n y/y n y y ?
+Mac OS X Yosemite 10.10.5 64-bit n y/y n y y ?
+Mac OS X El Capitan 10.11.6 64-bit n y/y n y y ?
CentOS 5.9 Linux 2.6.18-308 i686 GNU y y/y y y y y
CentOS 5.9 Linux 2.6.18-308 i686 Intel n y/y n y y y
CentOS 5.9 Linux 2.6.18-308 i686 PGI n y/y n y y y
@@ -1412,7 +260,7 @@ CentOS 5.9 Linux 2.6.18 x86_64 Intel n y/y n y y y
CentOS 6.4 Linux 2.6.32 x86_64 GNU y y/y y y y y
CentOS 6.4 Linux 2.6.32 x86_64 Intel n y/y n y y y
CentOS 6.4 Linux 2.6.32 x86_64 PGI n y/y n y y y
-Linux 2.6.32-431.11.2.el6.ppc64 n y/n n y y y
+Linux 2.6.32-573.18.1.el6.ppc64 n y/n n y y y
Platform Shared Shared Shared Thread-
@@ -1425,11 +273,12 @@ Windows 7 Cygwin n n n y
Windows 7 x64 Cygwin n n n y
Windows 8 y y y y
Windows 8 x64 y y y y
-Mac OS X Lion 10.7.3 32-bit y n y y
-Mac OS X Lion 10.7.3 64-bit y n y y
-Mac OS X Mountain Lion 10.8.1 64-bit y n y y
-Mac OS X Mavericks 10.9.1 64-bit y n y y
-AIX 6.1 32- and 64-bit y n n y
+Windows 10 y y y y
+Windows 10 x64 y y y y
+Mac OS X Mountain Lion 10.8.5 64-bit y n y y
+Mac OS X Mavericks 10.9.5 64-bit y n y y
+Mac OS X Yosemite 10.10.5 64-bit y n y y
+Mac OS X El Capitan 10.11.6 64-bit y n y y
CentOS 5.9 Linux 2.6.18-308 i686 GNU y y y y
CentOS 5.9 Linux 2.6.18-308 i686 Intel y y y n
CentOS 5.9 Linux 2.6.18-308 i686 PGI y y y n
@@ -1438,7 +287,7 @@ CentOS 5.9 Linux 2.6.18 x86_64 Intel y y y n
CentOS 6.4 Linux 2.6.32 x86_64 GNU y y y n
CentOS 6.4 Linux 2.6.32 x86_64 Intel y y y n
CentOS 6.4 Linux 2.6.32 x86_64 PGI y y y n
-Linux 2.6.32-431.11.2.el6.ppc64 y y y n
+Linux 2.6.32-573.18.1.el6.ppc64 y y y n
Compiler versions for each platform are listed in the preceding
"Supported Platforms" table.
@@ -1448,24 +297,10 @@ More Tested Platforms
=====================
The following platforms are not supported but have been tested for this release.
- Linux 2.6.18-308.13.1.el5PAE MPICH mpich 3.1.2 compiled with
- #1 SMP i686 i686 i386 gcc 4.9.1 and gfortran 4.9.1
- (jam) g95 (GCC 4.0.3 (g95 0.94!)
-
- Linux 2.6.18-431.11.2.el6 MPICH mpich 3.1.2 compiled with
- #1 SMP x86_64 GNU/Linux gcc 4.9.1 and gfortran 4.9.1
+ Linux 2.6.18-431.11.2.el6 MPICH mpich 3.1.4 compiled with
+ #1 SMP x86_64 GNU/Linux gcc 4.9.3 and gfortran 4.9.3
(platypus) g95 (GCC 4.0.3 (g95 0.94!)
- FreeBSD 8.2-STABLE i386 gcc 4.2.1 [FreeBSD] 20070719
- (loyalty) gcc 4.6.1 20110422
- g++ 4.6.1 20110422
- gfortran 4.6.1 20110422
-
- FreeBSD 8.2-STABLE amd64 gcc 4.2.1 [FreeBSD] 20070719
- (freedom) gcc 4.6.1 20110422
- g++ 4.6.1 20110422
- gfortran 4.6.1 20110422
-
Debian7.5.0 3.2.0-4-686 #1 SMP Debian 3.2.51-1 i686 GNU/Linux
gcc (Debian 4.7.2-5) 4.7.2
GNU Fortran (Debian 4.7.2-5) 4.7.2