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authorQuincey Koziol <koziol@hdfgroup.org>2002-07-19 19:27:09 (GMT)
committerQuincey Koziol <koziol@hdfgroup.org>2002-07-19 19:27:09 (GMT)
commit99eee6dff9a38a1bab3d74b4b77dd8169e57409c (patch)
tree5db3dd6e5ed35a694c655337750dc741e30181fb /src/H5B.c
parent814ea8b962fec329f6a440d1f52f6b682de47524 (diff)
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[svn-r5814] Purpose:
Bug Fix Description: It was possible to create corrupted metadata information (either in memory or in the file or both) with a parallel I/O program because of the way metadata writes were being handled for writes out of the metadata cache. Solution: Added a dataset transfer property called "block before metadata write" which is used by the MPI-I/O and MPI-posix drivers to sync up all the processes before attempting a metadata write. This property is currently only for metadata writes from the metadata cache. Platforms tested: IRIX64 6.5 (modi4) w/parallel
Diffstat (limited to 'src/H5B.c')
-rw-r--r--src/H5B.c24
1 files changed, 16 insertions, 8 deletions
diff --git a/src/H5B.c b/src/H5B.c
index 244efa6..a17004f 100644
--- a/src/H5B.c
+++ b/src/H5B.c
@@ -118,8 +118,8 @@ static H5B_ins_t H5B_insert_helper(H5F_t *f, haddr_t addr,
static herr_t H5B_insert_child(H5F_t *f, const H5B_class_t *type,
H5B_t *bt, int idx, haddr_t child,
H5B_ins_t anchor, void *md_key);
-static herr_t H5B_flush(H5F_t *f, hbool_t destroy, haddr_t addr, H5B_t *b);
-static H5B_t *H5B_load(H5F_t *f, haddr_t addr, const void *_type, void *udata);
+static herr_t H5B_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B_t *b);
+static H5B_t *H5B_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void *_type, void *udata);
static herr_t H5B_decode_key(H5F_t *f, H5B_t *bt, int idx);
static herr_t H5B_decode_keys(H5F_t *f, H5B_t *bt, int idx);
static size_t H5B_nodesize(H5F_t *f, const H5B_class_t *type,
@@ -137,8 +137,8 @@ static herr_t H5B_assert(H5F_t *f, haddr_t addr, const H5B_class_t *type,
/* H5B inherits cache-like properties from H5AC */
static const H5AC_class_t H5AC_BT[1] = {{
H5AC_BT_ID,
- (void *(*)(H5F_t*, haddr_t, const void*, void*))H5B_load,
- (herr_t (*)(H5F_t*, hbool_t, haddr_t, void*))H5B_flush,
+ (H5AC_load_func_t)H5B_load,
+ (H5AC_flush_func_t)H5B_flush,
}};
/* Interface initialization? */
@@ -343,10 +343,14 @@ H5B_Kvalue(H5F_t *f, const H5B_class_t *type)
* Modifications:
* Robb Matzke, 1999-07-28
* The ADDR argument is passed by value.
+ *
+ * Quincey Koziol, 2002-7-180
+ * Added dxpl parameter to allow more control over I/O from metadata
+ * cache.
*-------------------------------------------------------------------------
*/
static H5B_t *
-H5B_load(H5F_t *f, haddr_t addr, const void *_type, void *udata)
+H5B_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void *_type, void *udata)
{
const H5B_class_t *type = (const H5B_class_t *) _type;
size_t total_nkey_size;
@@ -380,7 +384,7 @@ H5B_load(H5F_t *f, haddr_t addr, const void *_type, void *udata)
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, NULL,
"memory allocation failed");
}
- if (H5F_block_read(f, H5FD_MEM_BTREE, addr, size, H5P_DATASET_XFER_DEFAULT, bt->page)<0) {
+ if (H5F_block_read(f, H5FD_MEM_BTREE, addr, size, dxpl_id, bt->page)<0) {
HGOTO_ERROR(H5E_BTREE, H5E_READERROR, NULL,
"can't read B-tree node");
}
@@ -456,10 +460,14 @@ H5B_load(H5F_t *f, haddr_t addr, const void *_type, void *udata)
*
* Robb Matzke, 1999-07-28
* The ADDR argument is passed by value.
+ *
+ * Quincey Koziol, 2002-7-180
+ * Added dxpl parameter to allow more control over I/O from metadata
+ * cache.
*-------------------------------------------------------------------------
*/
static herr_t
-H5B_flush(H5F_t *f, hbool_t destroy, haddr_t addr, H5B_t *bt)
+H5B_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B_t *bt)
{
int i;
size_t size = 0;
@@ -525,7 +533,7 @@ H5B_flush(H5F_t *f, hbool_t destroy, haddr_t addr, H5B_t *bt)
* bother writing data for the child entries that don't exist or
* for the final unchanged children.
*/
- if (H5F_block_write(f, H5FD_MEM_BTREE, addr, size, H5P_DATASET_XFER_DEFAULT, bt->page)<0) {
+ if (H5F_block_write(f, H5FD_MEM_BTREE, addr, size, dxpl_id, bt->page)<0) {
HRETURN_ERROR(H5E_BTREE, H5E_CANTFLUSH, FAIL,
"unable to save B-tree node to disk");
}