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author | Quincey Koziol <koziol@hdfgroup.org> | 2009-10-29 13:58:52 (GMT) |
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committer | Quincey Koziol <koziol@hdfgroup.org> | 2009-10-29 13:58:52 (GMT) |
commit | 56276c02cdfe8d16c9663a5875803e89112700ed (patch) | |
tree | 64628715223d2a751300768f75e3ea76187845ba /src/H5B2.c | |
parent | 0475c8ce57f84ced2e8ab35dabbcde6bd4e4e3fa (diff) | |
download | hdf5-56276c02cdfe8d16c9663a5875803e89112700ed.zip hdf5-56276c02cdfe8d16c9663a5875803e89112700ed.tar.gz hdf5-56276c02cdfe8d16c9663a5875803e89112700ed.tar.bz2 |
[svn-r17785] Description:
Further refactor v2 B-tree code to bring it closer to modern data
structure designed in the library, mainly by introducing a H5B2_t type so that
the v2 B-tree could be held open, but not require the B-tree header to be
protected the whole time. A few other minor tweaks as well.
Also, remove unused 'dirty' flag from fractal heap header.
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (smirom) w/Intel compilers, w/default API=1.6.x,
w/C++ & FORTRAN, in production mode
Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
w/szip filter, in production mode
Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
in production mode
Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode
Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
Mac OS X/32 10.6.1 (amazon) in debug mode
Mac OS X/32 10.6.1 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
Diffstat (limited to 'src/H5B2.c')
-rw-r--r-- | src/H5B2.c | 436 |
1 files changed, 290 insertions, 146 deletions
@@ -61,9 +61,9 @@ /********************/ /* Local Prototypes */ /********************/ -static H5B2_hdr_t *H5B2_open(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, - haddr_t addr, H5AC_protect_t rw); -static herr_t H5B2_close(H5B2_hdr_t *hdr, hid_t dxpl_id); +static H5B2_t *H5B2_open(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *cls, + haddr_t addr); +static herr_t H5B2_close(H5B2_t *bt2, hid_t dxpl_id); /*********************/ @@ -80,6 +80,10 @@ static herr_t H5B2_close(H5B2_hdr_t *hdr, hid_t dxpl_id); /* Local Variables */ /*******************/ +/* Declare a free list to manage the H5B2_t struct */ +H5FL_DEFINE_STATIC(H5B2_t); + + /*------------------------------------------------------------------------- * Function: H5B2_create @@ -137,34 +141,53 @@ done: * *------------------------------------------------------------------------- */ -static H5B2_hdr_t * -H5B2_open(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, - H5AC_protect_t rw) +static H5B2_t * +H5B2_open(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *cls, haddr_t addr) { + H5B2_t *bt2 = NULL; /* Pointer to the B-tree */ H5B2_hdr_t *hdr = NULL; /* Pointer to the B-tree header */ - H5B2_hdr_t *ret_value; /* Return value */ + H5B2_t *ret_value; /* Return value */ FUNC_ENTER_NOAPI_NOINIT(H5B2_open) /* Check arguments. */ HDassert(f); - HDassert(type); + HDassert(cls); HDassert(H5F_addr_defined(addr)); /* Look up the B-tree header */ - if(NULL == (hdr = (H5B2_hdr_t *)H5AC_protect(f, dxpl_id, H5AC_BT2_HDR, addr, type, NULL, rw))) + if(NULL == (hdr = (H5B2_hdr_t *)H5AC_protect(f, dxpl_id, H5AC_BT2_HDR, addr, cls, NULL, H5AC_READ))) HGOTO_ERROR(H5E_BTREE, H5E_CANTPROTECT, NULL, "unable to load B-tree header") - /* Set file pointer for this B-tree operation */ - hdr->f = f; + /* Check for pending heap deletion */ + if(hdr->pending_delete) + HGOTO_ERROR(H5E_BTREE, H5E_CANTOPENOBJ, NULL, "can't open v2 B-tree pending deletion") + + /* Create v2 B-tree info */ + if(NULL == (bt2 = H5FL_MALLOC(H5B2_t))) + HGOTO_ERROR(H5E_BTREE, H5E_CANTALLOC, NULL, "memory allocation failed for v2 B-tree info") + + /* Point v2 B-tree wrapper at header */ + bt2->hdr = hdr; + if(H5B2_hdr_incr(bt2->hdr) < 0) + HGOTO_ERROR(H5E_BTREE, H5E_CANTINC, NULL, "can't increment reference count on shared v2 B-tree header") + + /* Increment # of files using this v2 B-tree header */ + if(H5B2_hdr_fuse_incr(bt2->hdr) < 0) + HGOTO_ERROR(H5E_BTREE, H5E_CANTINC, NULL, "can't increment file reference count on shared v2 B-tree header") + + /* Set file pointer for this v2 B-tree open context */ + bt2->f = f; /* Set the return value */ - ret_value = hdr; + ret_value = bt2; done: - if(!ret_value && hdr) - if(H5B2_close(hdr, dxpl_id) < 0) - HDONE_ERROR(H5E_BTREE, H5E_CANTCLOSEOBJ, NULL, "unable to close B-tree") + if(hdr && H5AC_unprotect(f, dxpl_id, H5AC_BT2_HDR, addr, hdr, H5AC__NO_FLAGS_SET) < 0) + HDONE_ERROR(H5E_BTREE, H5E_CANTUNPROTECT, NULL, "unable to release v2 B-tree header") + if(!ret_value && bt2) + if(H5B2_close(bt2, dxpl_id) < 0) + HDONE_ERROR(H5E_BTREE, H5E_CANTCLOSEOBJ, NULL, "unable to close v2 B-tree") FUNC_LEAVE_NOAPI(ret_value) } /* H5B2_open() */ @@ -184,23 +207,30 @@ done: *------------------------------------------------------------------------- */ herr_t -H5B2_insert(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, +H5B2_insert(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *cls, haddr_t addr, void *udata) { - H5B2_hdr_t *hdr = NULL; /* Pointer to the B-tree header */ + H5B2_t *bt2 = NULL; /* Pointer to the B-tree */ + H5B2_hdr_t *hdr; /* Pointer to the B-tree header */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5B2_insert, FAIL) /* Check arguments. */ HDassert(f); - HDassert(type); + HDassert(cls); HDassert(H5F_addr_defined(addr)); - /* Open the B-tree header */ - if(NULL == (hdr = H5B2_open(f, dxpl_id, type, addr, H5AC_WRITE))) + /* Open the B-tree */ + if(NULL == (bt2 = H5B2_open(f, dxpl_id, cls, addr))) HGOTO_ERROR(H5E_BTREE, H5E_CANTOPENOBJ, FAIL, "unable to open B-tree") + /* Set the shared v2 B-tree header's file context for this operation */ + bt2->hdr->f = bt2->f; + + /* Get the v2 B-tree header */ + hdr = bt2->hdr; + /* Check if the root node is allocated yet */ if(!H5F_addr_defined(hdr->root.addr)) { /* Create root node as leaf node in B-tree */ @@ -230,7 +260,7 @@ H5B2_insert(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, done: /* Close the B-tree */ - if(hdr && H5B2_close(hdr, dxpl_id) < 0) + if(bt2 && H5B2_close(bt2, dxpl_id) < 0) HDONE_ERROR(H5E_BTREE, H5E_CANTCLOSEOBJ, FAIL, "unable to close B-tree") FUNC_LEAVE_NOAPI(ret_value) @@ -255,24 +285,31 @@ done: *------------------------------------------------------------------------- */ herr_t -H5B2_iterate(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, +H5B2_iterate(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *cls, haddr_t addr, H5B2_operator_t op, void *op_data) { - H5B2_hdr_t *hdr = NULL; /* Pointer to the B-tree header */ + H5B2_t *bt2 = NULL; /* Pointer to the B-tree */ + H5B2_hdr_t *hdr; /* Pointer to the B-tree header */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5B2_iterate, FAIL) /* Check arguments. */ HDassert(f); - HDassert(type); + HDassert(cls); HDassert(H5F_addr_defined(addr)); HDassert(op); - /* Open the B-tree header */ - if(NULL == (hdr = H5B2_open(f, dxpl_id, type, addr, H5AC_READ))) + /* Open the B-tree */ + if(NULL == (bt2 = H5B2_open(f, dxpl_id, cls, addr))) HGOTO_ERROR(H5E_BTREE, H5E_CANTOPENOBJ, FAIL, "unable to open B-tree") + /* Set the shared v2 B-tree header's file context for this operation */ + bt2->hdr->f = bt2->f; + + /* Get the v2 B-tree header */ + hdr = bt2->hdr; + /* Iterate through records */ if(hdr->root.node_nrec > 0) { /* Iterate through nodes */ @@ -282,7 +319,7 @@ H5B2_iterate(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, done: /* Close the B-tree */ - if(hdr && H5B2_close(hdr, dxpl_id) < 0) + if(bt2 && H5B2_close(bt2, dxpl_id) < 0) HDONE_ERROR(H5E_BTREE, H5E_CANTCLOSEOBJ, FAIL, "unable to close B-tree") FUNC_LEAVE_NOAPI(ret_value) @@ -313,10 +350,11 @@ done: *------------------------------------------------------------------------- */ htri_t -H5B2_find(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, +H5B2_find(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *cls, haddr_t addr, void *udata, H5B2_found_t op, void *op_data) { - H5B2_hdr_t *hdr = NULL; /* Pointer to the B-tree header */ + H5B2_t *bt2 = NULL; /* Pointer to the B-tree */ + H5B2_hdr_t *hdr; /* Pointer to the B-tree header */ H5B2_node_ptr_t curr_node_ptr; /* Node pointer info for current node */ unsigned depth; /* Current depth of the tree */ int cmp; /* Comparison value of records */ @@ -327,13 +365,19 @@ H5B2_find(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, /* Check arguments. */ HDassert(f); - HDassert(type); + HDassert(cls); HDassert(H5F_addr_defined(addr)); - /* Open the B-tree header */ - if(NULL == (hdr = H5B2_open(f, dxpl_id, type, addr, H5AC_READ))) + /* Open the B-tree */ + if(NULL == (bt2 = H5B2_open(f, dxpl_id, cls, addr))) HGOTO_ERROR(H5E_BTREE, H5E_CANTOPENOBJ, FAIL, "unable to open B-tree") + /* Set the shared v2 B-tree header's file context for this operation */ + bt2->hdr->f = bt2->f; + + /* Get the v2 B-tree header */ + hdr = bt2->hdr; + /* Make copy of the root node pointer to start search with */ curr_node_ptr = hdr->root; @@ -428,7 +472,7 @@ H5B2_find(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, done: /* Close the B-tree */ - if(hdr && H5B2_close(hdr, dxpl_id) < 0) + if(bt2 && H5B2_close(bt2, dxpl_id) < 0) HDONE_ERROR(H5E_BTREE, H5E_CANTCLOSEOBJ, FAIL, "unable to close B-tree") FUNC_LEAVE_NOAPI(ret_value) @@ -454,10 +498,11 @@ done: *------------------------------------------------------------------------- */ herr_t -H5B2_index(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, +H5B2_index(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *cls, haddr_t addr, H5_iter_order_t order, hsize_t idx, H5B2_found_t op, void *op_data) { - H5B2_hdr_t *hdr = NULL; /* Pointer to the B-tree header */ + H5B2_t *bt2 = NULL; /* Pointer to the B-tree */ + H5B2_hdr_t *hdr; /* Pointer to the B-tree header */ H5B2_node_ptr_t curr_node_ptr; /* Node pointer info for current node */ unsigned depth; /* Current depth of the tree */ herr_t ret_value = SUCCEED; /* Return value */ @@ -466,14 +511,20 @@ H5B2_index(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, /* Check arguments. */ HDassert(f); - HDassert(type); + HDassert(cls); HDassert(H5F_addr_defined(addr)); HDassert(op); - /* Open the B-tree header */ - if(NULL == (hdr = H5B2_open(f, dxpl_id, type, addr, H5AC_READ))) + /* Open the B-tree */ + if(NULL == (bt2 = H5B2_open(f, dxpl_id, cls, addr))) HGOTO_ERROR(H5E_BTREE, H5E_CANTOPENOBJ, FAIL, "unable to open B-tree") + /* Set the shared v2 B-tree header's file context for this operation */ + bt2->hdr->f = bt2->f; + + /* Get the v2 B-tree header */ + hdr = bt2->hdr; + /* Make copy of the root node pointer to start search with */ curr_node_ptr = hdr->root; @@ -593,7 +644,7 @@ H5B2_index(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, done: /* Close the B-tree */ - if(hdr && H5B2_close(hdr, dxpl_id) < 0) + if(bt2 && H5B2_close(bt2, dxpl_id) < 0) HDONE_ERROR(H5E_BTREE, H5E_CANTCLOSEOBJ, FAIL, "unable to close B-tree") FUNC_LEAVE_NOAPI(ret_value) @@ -614,23 +665,30 @@ done: *------------------------------------------------------------------------- */ herr_t -H5B2_remove(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, +H5B2_remove(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *cls, haddr_t addr, void *udata, H5B2_remove_t op, void *op_data) { - H5B2_hdr_t *hdr = NULL; /* Pointer to the B-tree header */ + H5B2_t *bt2 = NULL; /* Pointer to the B-tree */ + H5B2_hdr_t *hdr; /* Pointer to the B-tree header */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5B2_remove, FAIL) /* Check arguments. */ HDassert(f); - HDassert(type); + HDassert(cls); HDassert(H5F_addr_defined(addr)); - /* Open the B-tree header */ - if(NULL == (hdr = H5B2_open(f, dxpl_id, type, addr, H5AC_WRITE))) + /* Open the B-tree */ + if(NULL == (bt2 = H5B2_open(f, dxpl_id, cls, addr))) HGOTO_ERROR(H5E_BTREE, H5E_CANTOPENOBJ, FAIL, "unable to open B-tree") + /* Set the shared v2 B-tree header's file context for this operation */ + bt2->hdr->f = bt2->f; + + /* Get the v2 B-tree header */ + hdr = bt2->hdr; + /* Check for empty B-tree */ if(0 == hdr->root.all_nrec) HGOTO_ERROR(H5E_BTREE, H5E_NOTFOUND, FAIL, "record is not in B-tree") @@ -670,7 +728,7 @@ H5B2_remove(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, done: /* Close the B-tree */ - if(hdr && H5B2_close(hdr, dxpl_id) < 0) + if(bt2 && H5B2_close(bt2, dxpl_id) < 0) HDONE_ERROR(H5E_BTREE, H5E_CANTCLOSEOBJ, FAIL, "unable to close B-tree") FUNC_LEAVE_NOAPI(ret_value) @@ -691,24 +749,31 @@ done: *------------------------------------------------------------------------- */ herr_t -H5B2_remove_by_idx(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, +H5B2_remove_by_idx(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *cls, haddr_t addr, H5_iter_order_t order, hsize_t idx, H5B2_remove_t op, void *op_data) { - H5B2_hdr_t *hdr = NULL; /* Pointer to the B-tree header */ + H5B2_t *bt2 = NULL; /* Pointer to the B-tree */ + H5B2_hdr_t *hdr; /* Pointer to the B-tree header */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5B2_remove_by_idx, FAIL) /* Check arguments. */ HDassert(f); - HDassert(type); + HDassert(cls); HDassert(H5F_addr_defined(addr)); - /* Open the B-tree header */ - if(NULL == (hdr = H5B2_open(f, dxpl_id, type, addr, H5AC_WRITE))) + /* Open the B-tree */ + if(NULL == (bt2 = H5B2_open(f, dxpl_id, cls, addr))) HGOTO_ERROR(H5E_BTREE, H5E_CANTOPENOBJ, FAIL, "unable to open B-tree") + /* Set the shared v2 B-tree header's file context for this operation */ + bt2->hdr->f = bt2->f; + + /* Get the v2 B-tree header */ + hdr = bt2->hdr; + /* Check for empty B-tree */ if(0 == hdr->root.all_nrec) HGOTO_ERROR(H5E_BTREE, H5E_NOTFOUND, FAIL, "record is not in B-tree") @@ -756,7 +821,7 @@ H5B2_remove_by_idx(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, done: /* Close the B-tree */ - if(hdr && H5B2_close(hdr, dxpl_id) < 0) + if(bt2 && H5B2_close(bt2, dxpl_id) < 0) HDONE_ERROR(H5E_BTREE, H5E_CANTCLOSEOBJ, FAIL, "unable to close B-tree") FUNC_LEAVE_NOAPI(ret_value) @@ -777,30 +842,37 @@ done: *------------------------------------------------------------------------- */ herr_t -H5B2_get_nrec(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, +H5B2_get_nrec(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *cls, haddr_t addr, hsize_t *nrec) { - H5B2_hdr_t *hdr = NULL; /* Pointer to the B-tree header */ + H5B2_t *bt2 = NULL; /* Pointer to the B-tree */ + H5B2_hdr_t *hdr; /* Pointer to the B-tree header */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5B2_get_nrec, FAIL) /* Check arguments. */ HDassert(f); - HDassert(type); + HDassert(cls); HDassert(H5F_addr_defined(addr)); HDassert(nrec); - /* Open the B-tree header */ - if(NULL == (hdr = H5B2_open(f, dxpl_id, type, addr, H5AC_READ))) + /* Open the B-tree */ + if(NULL == (bt2 = H5B2_open(f, dxpl_id, cls, addr))) HGOTO_ERROR(H5E_BTREE, H5E_CANTOPENOBJ, FAIL, "unable to open B-tree") + /* Set the shared v2 B-tree header's file context for this operation */ + bt2->hdr->f = bt2->f; + + /* Get the v2 B-tree header */ + hdr = bt2->hdr; + /* Get B-tree number of records */ *nrec = hdr->root.all_nrec; done: /* Close the B-tree */ - if(hdr && H5B2_close(hdr, dxpl_id) < 0) + if(bt2 && H5B2_close(bt2, dxpl_id) < 0) HDONE_ERROR(H5E_BTREE, H5E_CANTCLOSEOBJ, FAIL, "unable to close B-tree") FUNC_LEAVE_NOAPI(ret_value) @@ -833,24 +905,31 @@ done: *------------------------------------------------------------------------- */ herr_t -H5B2_neighbor(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, +H5B2_neighbor(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *cls, haddr_t addr, H5B2_compare_t range, void *udata, H5B2_found_t op, void *op_data) { - H5B2_hdr_t *hdr = NULL; /* Pointer to the B-tree header */ + H5B2_t *bt2 = NULL; /* Pointer to the B-tree */ + H5B2_hdr_t *hdr; /* Pointer to the B-tree header */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5B2_neighbor, FAIL) /* Check arguments. */ HDassert(f); - HDassert(type); + HDassert(cls); HDassert(H5F_addr_defined(addr)); HDassert(op); - /* Open the B-tree header */ - if(NULL == (hdr = H5B2_open(f, dxpl_id, type, addr, H5AC_READ))) + /* Open the B-tree */ + if(NULL == (bt2 = H5B2_open(f, dxpl_id, cls, addr))) HGOTO_ERROR(H5E_BTREE, H5E_CANTOPENOBJ, FAIL, "unable to open B-tree") + /* Set the shared v2 B-tree header's file context for this operation */ + bt2->hdr->f = bt2->f; + + /* Get the v2 B-tree header */ + hdr = bt2->hdr; + /* Check for empty tree */ if(!H5F_addr_defined(hdr->root.addr)) HGOTO_ERROR(H5E_BTREE, H5E_NOTFOUND, FAIL, "B-tree has no records") @@ -867,7 +946,7 @@ H5B2_neighbor(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, done: /* Close the B-tree */ - if(hdr && H5B2_close(hdr, dxpl_id) < 0) + if(bt2 && H5B2_close(bt2, dxpl_id) < 0) HDONE_ERROR(H5E_BTREE, H5E_CANTCLOSEOBJ, FAIL, "unable to close B-tree") FUNC_LEAVE_NOAPI(ret_value) @@ -875,64 +954,6 @@ done: /*------------------------------------------------------------------------- - * Function: H5B2_delete - * - * Purpose: Delete an entire B-tree from a file. - * - * The 'OP' routine is called for each record and the - * OP_DATA pointer, to allow caller to perform an operation as - * each record is removed from the B-tree. - * - * If 'OP' is NULL, the records are just removed in the process - * of deleting the B-tree. - * - * Note: The records are _not_ guaranteed to be visited in order. - * - * Return: Non-negative on success, negative on failure. - * - * Programmer: Quincey Koziol - * koziol@ncsa.uiuc.edu - * Mar 9 2005 - * - *------------------------------------------------------------------------- - */ -herr_t -H5B2_delete(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, - H5B2_remove_t op, void *op_data) -{ - H5B2_hdr_t *hdr = NULL; /* Pointer to the B-tree header */ - herr_t ret_value = SUCCEED; /* Return value */ - - FUNC_ENTER_NOAPI(H5B2_delete, FAIL) - - /* Check arguments. */ - HDassert(f); - HDassert(type); - HDassert(H5F_addr_defined(addr)); - - /* Open the B-tree header */ - if(NULL == (hdr = H5B2_open(f, dxpl_id, type, addr, H5AC_WRITE))) - HGOTO_ERROR(H5E_BTREE, H5E_CANTOPENOBJ, FAIL, "unable to open B-tree") - - /* Delete all nodes in B-tree */ - if(H5F_addr_defined(hdr->root.addr)) - if(H5B2_delete_node(f, dxpl_id, hdr, hdr->depth, &hdr->root, op, op_data) < 0) - HGOTO_ERROR(H5E_BTREE, H5E_CANTDELETE, FAIL, "unable to delete B-tree nodes") - - /* Mark B-tree header for deletion */ - if(H5B2_hdr_delete(hdr) < 0) - HGOTO_ERROR(H5E_BTREE, H5E_CANTDELETE, FAIL, "unable to mark B-tree header for deletion") - -done: - /* Close the B-tree */ - if(hdr && H5B2_close(hdr, dxpl_id) < 0) - HDONE_ERROR(H5E_BTREE, H5E_CANTCLOSEOBJ, FAIL, "unable to close B-tree") - - FUNC_LEAVE_NOAPI(ret_value) -} /* H5B2_delete() */ - - -/*------------------------------------------------------------------------- * Function: H5B2_modify * * Purpose: Locate the specified information in a B-tree and modify it. @@ -953,10 +974,11 @@ done: *------------------------------------------------------------------------- */ herr_t -H5B2_modify(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, +H5B2_modify(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *cls, haddr_t addr, void *udata, H5B2_modify_t op, void *op_data) { - H5B2_hdr_t *hdr = NULL; /* Pointer to the B-tree header */ + H5B2_t *bt2 = NULL; /* Pointer to the B-tree */ + H5B2_hdr_t *hdr; /* Pointer to the B-tree header */ H5B2_node_ptr_t curr_node_ptr; /* Node pointer info for current node */ unsigned depth; /* Current depth of the tree */ int cmp; /* Comparison value of records */ @@ -967,14 +989,20 @@ H5B2_modify(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, /* Check arguments. */ HDassert(f); - HDassert(type); + HDassert(cls); HDassert(H5F_addr_defined(addr)); HDassert(op); - /* Open the B-tree header */ - if(NULL == (hdr = H5B2_open(f, dxpl_id, type, addr, H5AC_READ))) + /* Open the B-tree */ + if(NULL == (bt2 = H5B2_open(f, dxpl_id, cls, addr))) HGOTO_ERROR(H5E_BTREE, H5E_CANTOPENOBJ, FAIL, "unable to open B-tree") + /* Set the shared v2 B-tree header's file context for this operation */ + bt2->hdr->f = bt2->f; + + /* Get the v2 B-tree header */ + hdr = bt2->hdr; + /* Make copy of the root node pointer to start search with */ curr_node_ptr = hdr->root; @@ -1092,7 +1120,7 @@ H5B2_modify(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, done: /* Close the B-tree */ - if(hdr && H5B2_close(hdr, dxpl_id) < 0) + if(bt2 && H5B2_close(bt2, dxpl_id) < 0) HDONE_ERROR(H5E_BTREE, H5E_CANTCLOSEOBJ, FAIL, "unable to close B-tree") FUNC_LEAVE_NOAPI(ret_value) @@ -1113,23 +1141,30 @@ done: *------------------------------------------------------------------------- */ herr_t -H5B2_iterate_size(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr, hsize_t *btree_size) +H5B2_iterate_size(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *cls, haddr_t addr, hsize_t *btree_size) { - H5B2_hdr_t *hdr = NULL; /* Pointer to the B-tree header */ - herr_t ret_value = SUCCEED;/* Return value */ + H5B2_t *bt2 = NULL; /* Pointer to the B-tree */ + H5B2_hdr_t *hdr; /* Pointer to the B-tree header */ + herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5B2_iterate_size, FAIL) /* Check arguments. */ HDassert(f); - HDassert(type); + HDassert(cls); HDassert(H5F_addr_defined(addr)); HDassert(btree_size); - /* Open the B-tree header */ - if(NULL == (hdr = H5B2_open(f, dxpl_id, type, addr, H5AC_READ))) + /* Open the B-tree */ + if(NULL == (bt2 = H5B2_open(f, dxpl_id, cls, addr))) HGOTO_ERROR(H5E_BTREE, H5E_CANTOPENOBJ, FAIL, "unable to open B-tree") + /* Set the shared v2 B-tree header's file context for this operation */ + bt2->hdr->f = bt2->f; + + /* Get the v2 B-tree header */ + hdr = bt2->hdr; + /* Add size of header to B-tree metadata total */ *btree_size += H5B2_HEADER_SIZE(f); @@ -1146,7 +1181,7 @@ H5B2_iterate_size(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t add done: /* Close the B-tree */ - if(hdr && H5B2_close(hdr, dxpl_id) < 0) + if(bt2 && H5B2_close(bt2, dxpl_id) < 0) HDONE_ERROR(H5E_BTREE, H5E_CANTCLOSEOBJ, FAIL, "unable to close B-tree") FUNC_LEAVE_NOAPI(ret_value) @@ -1167,27 +1202,136 @@ done: *------------------------------------------------------------------------- */ static herr_t -H5B2_close(H5B2_hdr_t *hdr, hid_t dxpl_id) +H5B2_close(H5B2_t *bt2, hid_t dxpl_id) { - unsigned hdr_flags = H5AC__NO_FLAGS_SET; /* Metadata cache flags for unprotecting header */ - herr_t ret_value = SUCCEED; /* Return value */ + const H5B2_class_t *cls = NULL; /* Class of v2 B-tree client */ + haddr_t bt2_addr = HADDR_UNDEF; /* Address of v2 B-tree (for deletion) */ + hbool_t pending_delete = FALSE; /* Whether the v2 B-tree is pending deletion */ + herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI_NOINIT(H5B2_close) /* Check arguments. */ - HDassert(hdr); - HDassert(hdr->f); - HDassert(H5F_addr_defined(hdr->addr)); + HDassert(bt2); + HDassert(bt2->f); + + /* Decrement file reference & check if this is the last open v2 B-tree using the shared B-tree header */ + if(0 == H5B2_hdr_fuse_decr(bt2->hdr)) { + /* Set the shared v2 B-tree header's file context for this operation */ + bt2->hdr->f = bt2->f; + + /* Check for pending B-tree deletion */ + if(bt2->hdr->pending_delete) { + /* Set local info, so B-tree deletion can occur after decrementing the + * header's ref count + */ + pending_delete = TRUE; + bt2_addr = bt2->hdr->addr; + cls = bt2->hdr->cls; + } /* end if */ + } /* end if */ - /* Check if we are supposed to delete the header */ - if(hdr->pending_delete) - hdr_flags = H5AC__DIRTIED_FLAG | H5AC__DELETED_FLAG | H5AC__FREE_FILE_SPACE_FLAG; + /* Decrement the reference count on the B-tree header */ + /* (don't put in H5B2_hdr_fuse_decr() as the B-tree header may be evicted + * immediately -QAK) + */ + if(H5B2_hdr_decr(bt2->hdr) < 0) + HGOTO_ERROR(H5E_BTREE, H5E_CANTDEC, FAIL, "can't decrement reference count on shared v2 B-tree header") + + /* Check for pending v2 B-tree deletion */ + if(pending_delete) { + H5B2_hdr_t *hdr; /* Another pointer to v2 B-tree header */ - /* Release the B-tree header info */ - if(H5AC_unprotect(hdr->f, dxpl_id, H5AC_BT2_HDR, hdr->addr, hdr, hdr_flags) < 0) - HGOTO_ERROR(H5E_BTREE, H5E_CANTUNPROTECT, FAIL, "unable to release B-tree header") + /* Sanity check */ + HDassert(H5F_addr_defined(bt2_addr)); + HDassert(cls); + + /* Lock the v2 B-tree header into memory */ + if(NULL == (hdr = (H5B2_hdr_t *)H5AC_protect(bt2->f, dxpl_id, H5AC_BT2_HDR, bt2_addr, cls, NULL, H5AC_WRITE))) + HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load v2 B-tree header") + + /* Set the shared v2 B-tree header's file context for this operation */ + hdr->f = bt2->f; + + /* Delete v2 B-tree, starting with header (unprotects header) */ + if(H5B2_hdr_delete(hdr, dxpl_id) < 0) + HGOTO_ERROR(H5E_BTREE, H5E_CANTDELETE, FAIL, "unable to delete v2 B-tree") + } /* end if */ + + /* Release the v2 B-tree wrapper */ + bt2 = H5FL_FREE(H5B2_t, bt2); done: FUNC_LEAVE_NOAPI(ret_value) } /* H5B2_close() */ + +/*------------------------------------------------------------------------- + * Function: H5B2_delete + * + * Purpose: Delete an entire B-tree from a file. + * + * The 'OP' routine is called for each record and the + * OP_DATA pointer, to allow caller to perform an operation as + * each record is removed from the B-tree. + * + * If 'OP' is NULL, the records are just removed in the process + * of deleting the B-tree. + * + * Note: The records are _not_ guaranteed to be visited in order. + * + * Return: Non-negative on success, negative on failure. + * + * Programmer: Quincey Koziol + * koziol@ncsa.uiuc.edu + * Mar 9 2005 + * + *------------------------------------------------------------------------- + */ +herr_t +H5B2_delete(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *cls, haddr_t addr, + H5B2_remove_t op, void *op_data) +{ + H5B2_hdr_t *hdr = NULL; /* Pointer to the B-tree header */ + herr_t ret_value = SUCCEED; /* Return value */ + + FUNC_ENTER_NOAPI(H5B2_delete, FAIL) + + /* Check arguments. */ + HDassert(f); + HDassert(cls); + HDassert(H5F_addr_defined(addr)); + + /* Lock the v2 B-tree header into memory */ +#ifdef QAK +HDfprintf(stderr, "%s: addr = %a\n", FUNC, addr); +#endif /* QAK */ + if(NULL == (hdr = (H5B2_hdr_t *)H5AC_protect(f, dxpl_id, H5AC_BT2_HDR, addr, cls, NULL, H5AC_WRITE))) + HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load v2 B-tree header") + + /* Remember the callback & context for later */ + hdr->remove_op = op; + hdr->remove_op_data = op_data; + + /* Check for files using shared v2 B-tree header */ + if(hdr->file_rc) + hdr->pending_delete = TRUE; + else { + /* Set the shared v2 B-tree header's file context for this operation */ + hdr->f = f; + + /* Delete v2 B-tree now, starting with header (unprotects header) */ + if(H5B2_hdr_delete(hdr, dxpl_id) < 0) + HGOTO_ERROR(H5E_BTREE, H5E_CANTDELETE, FAIL, "unable to delete v2 B-tree") + hdr = NULL; + } /* end if */ + +done: + /* Unprotect the header, if an error occurred */ + if(hdr && H5AC_unprotect(f, dxpl_id, H5AC_BT2_HDR, addr, hdr, H5AC__NO_FLAGS_SET) < 0) + HDONE_ERROR(H5E_BTREE, H5E_CANTUNPROTECT, FAIL, "unable to release v2 B-tree header") + + + FUNC_LEAVE_NOAPI(ret_value) +} /* H5B2_delete() */ + |