diff options
author | Quincey Koziol <koziol@hdfgroup.org> | 2006-09-05 20:53:16 (GMT) |
---|---|---|
committer | Quincey Koziol <koziol@hdfgroup.org> | 2006-09-05 20:53:16 (GMT) |
commit | 23b3a6a91b88e6cbc3474e83fba1e4eb62763126 (patch) | |
tree | 937d5639b467eac5e394f994254e13f9ff2fb166 /src/H5B2pkg.h | |
parent | 35fc3a4a83e64dfa25d80fe84e6fd34ae75d7c8f (diff) | |
download | hdf5-23b3a6a91b88e6cbc3474e83fba1e4eb62763126.zip hdf5-23b3a6a91b88e6cbc3474e83fba1e4eb62763126.tar.gz hdf5-23b3a6a91b88e6cbc3474e83fba1e4eb62763126.tar.bz2 |
[svn-r12644] Description:
Improve density of the B-tree further. For greater depths of B-trees,
the gains are over 100%...
Also, don't split internal nodes with 3->4 splits, use a 1->2 split
instead, so that the density of the nodes around a split is maximized.
Tested:
Mac OS X/PPC 10.4 (amazon)
Linux/32 2.6 (chicago)
Linux/64 2.6 (chicago2)
Diffstat (limited to 'src/H5B2pkg.h')
-rw-r--r-- | src/H5B2pkg.h | 62 |
1 files changed, 34 insertions, 28 deletions
diff --git a/src/H5B2pkg.h b/src/H5B2pkg.h index 5c861b7..30b4adb 100644 --- a/src/H5B2pkg.h +++ b/src/H5B2pkg.h @@ -44,18 +44,22 @@ /* B-tree signatures */ #define H5B2_HDR_MAGIC "BTHD" /* Header */ -#define H5B2_BRCH_MAGIC "BTBR" /* Internal "branch" node */ -#define H5B2_TWIG_MAGIC "BTTW" /* Internal "twig" node */ +#define H5B2_INT_MAGIC "BTIN" /* Internal node */ #define H5B2_LEAF_MAGIC "BTLF" /* Leaf node */ /* Size of storage for number of records per node (on disk) */ #define H5B2_SIZEOF_RECORDS_PER_NODE 2 -/* Size of a "branch node pointer" (on disk) */ -#define H5B2_BRCH_POINTER_SIZE(f) (H5F_SIZEOF_ADDR(f)+H5B2_SIZEOF_RECORDS_PER_NODE+H5F_SIZEOF_SIZE(f)) +/* Size of a "tree pointer" (on disk) */ +/* (essentially, the largest internal pointer allowed) */ +#define H5B2_TREE_POINTER_SIZE(f) (H5F_SIZEOF_ADDR(f)+H5B2_SIZEOF_RECORDS_PER_NODE+H5F_SIZEOF_SIZE(f)) -/* Size of a "twig node pointer" (on disk) */ -#define H5B2_TWIG_POINTER_SIZE(f) (H5F_SIZEOF_ADDR(f)+H5B2_SIZEOF_RECORDS_PER_NODE) +/* Size of a internal node pointer (on disk) */ +#define H5B2_INT_POINTER_SIZE(f, s, d) ( \ + H5F_SIZEOF_ADDR(f) /* Address of child node */ \ + + (s)->max_nrec_size /* # of records in child node */ \ + + (s)->node_info[(d) - 1].cum_max_nrec_size /* Total # of records in child & below */ \ + ) /* Size of checksum information (on disk) */ #define H5B2_SIZEOF_CHKSUM 4 @@ -79,7 +83,7 @@ + 2 /* Depth of tree */ \ + 1 /* Split % of full (as integer, ie. "98" means 98%) */ \ + 1 /* Merge % of full (as integer, ie. "98" means 98%) */ \ - + H5B2_BRCH_POINTER_SIZE(f) /* Node pointer to root node in tree */ \ + + H5B2_TREE_POINTER_SIZE(f) /* Node pointer to root node in tree */ \ ) /* Size of the v2 B-tree internal node prefix */ @@ -121,36 +125,38 @@ typedef struct { hsize_t all_nrec; /* Number of records in node pointed to and all it's children */ } H5B2_node_ptr_t; +/* Information about a node at a given depth */ +typedef struct { + unsigned max_nrec; /* Max. number of records in node */ + unsigned split_nrec; /* Number of records to split node at */ + unsigned merge_nrec; /* Number of records to merge node at */ + hsize_t cum_max_nrec; /* Cumulative max. # of records below this node's depth */ + unsigned char cum_max_nrec_size; /* Size to store cumulative max. # of records for this node (in bytes) */ + H5FL_fac_head_t *nat_rec_fac; /* Factory for native record blocks */ + H5FL_fac_head_t *node_ptr_fac; /* Factory for node pointer blocks */ +} H5B2_node_info_t; + /* Each B-tree has certain information that can be shared across all * the instances of nodes in that B-tree. */ typedef struct H5B2_shared_t { /* Shared internal data structures */ const H5B2_class_t *type; /* Type of tree */ - uint8_t *page; /* Disk page */ - H5FL_fac_head_t *brch_fac; /* Factory for internal "branch" node native record blocks */ - H5FL_fac_head_t *twig_fac; /* Factory for internal "twig" node native record blocks */ - H5FL_fac_head_t *leaf_fac; /* Factory for leaf node native record blocks */ - H5FL_fac_head_t *brch_node_ptr_fac; /* Factory for internal "branch" node node pointer blocks */ - H5FL_fac_head_t *twig_node_ptr_fac; /* Factory for internal "twig" node node pointer blocks */ - size_t *nat_off; /* Array of offsets of native records */ - - /* Information set by user */ + uint8_t *page; /* Common disk page for I/O */ + size_t *nat_off; /* Array of offsets of native records */ + H5B2_node_info_t *node_info; /* Table of node info structs for current depth of B-tree */ + + /* Information set by user (stored) */ unsigned split_percent; /* Percent full at which to split the node, when inserting */ unsigned merge_percent; /* Percent full at which to merge the node, when deleting */ size_t node_size; /* Size of B-tree nodes, in bytes */ size_t rrec_size; /* Size of "raw" (on disk) record, in bytes */ + /* Dynamic information (stored) */ + unsigned depth; /* B-tree's overall depth */ + /* Derived information from user's information */ - size_t branch_nrec; /* Number of records which fit into an internal "branch" node */ - size_t split_brch_nrec; /* Number of records to split an internal "branch" node at */ - size_t merge_brch_nrec; /* Number of records to merge an internal "branch" node at */ - size_t twig_nrec; /* Number of records which fit into an internal "twig" node */ - size_t split_twig_nrec; /* Number of records to split an internal "twig" node at */ - size_t merge_twig_nrec; /* Number of records to merge an internal "twig" node at */ - size_t leaf_nrec; /* Number of records which fit into a leaf node */ - size_t split_leaf_nrec; /* Number of records to split a leaf node at */ - size_t merge_leaf_nrec; /* Number of records to merge a leaf node at */ + unsigned char max_nrec_size; /* Size to store max. # of records in any node (in bytes) */ } H5B2_shared_t; /* The B-tree information */ @@ -159,7 +165,6 @@ typedef struct H5B2_t { H5AC_info_t cache_info; /* Internal B-tree information */ - unsigned depth; /* B-tree's overall depth */ H5B2_node_ptr_t root; /* Node pointer to root node in B-tree */ H5RC_t *shared; /* Ref-counted shared info */ } H5B2_t; @@ -238,7 +243,8 @@ H5_DLLVAR const H5B2_class_t H5B2_TEST[1]; /* Routines for managing shared B-tree info */ H5_DLL herr_t H5B2_shared_init(H5F_t *f, H5B2_t *bt2, const H5B2_class_t *type, - size_t node_size, size_t rrec_size, unsigned split_percent, unsigned merge_percent); + unsigned depth, size_t node_size, size_t rrec_size, + unsigned split_percent, unsigned merge_percent); /* Routines for operating on internal nodes */ H5_DLL H5B2_internal_t *H5B2_protect_internal(H5F_t *f, hid_t dxpl_id, @@ -247,7 +253,7 @@ H5_DLL H5B2_internal_t *H5B2_protect_internal(H5F_t *f, hid_t dxpl_id, /* Routines for allocating nodes */ H5_DLL herr_t H5B2_split_root(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2, - unsigned *bt2_flags_ptr, H5RC_t *bt2_shared); + unsigned *bt2_flags_ptr); H5_DLL herr_t H5B2_create_leaf(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared, H5B2_node_ptr_t *node_ptr); |