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authorQuincey Koziol <koziol@hdfgroup.org>2009-10-15 18:26:50 (GMT)
committerQuincey Koziol <koziol@hdfgroup.org>2009-10-15 18:26:50 (GMT)
commitd38b38db5a78e1d47a7610b00c65f54b5533de0c (patch)
treee2dd16037e239fa45552f2fa113a4e6caa9287aa /src/H5B2pkg.h
parentf7b06c8505eee62e54e295468b45ebcfd0f2cf65 (diff)
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[svn-r17649] Description:
Refactor v2 B-trees to pin the B-tree header in the cache instead of using separate reference counted data structure. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.1 (amazon) in debug mode Mac OS X/32 10.6.1 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
Diffstat (limited to 'src/H5B2pkg.h')
-rw-r--r--src/H5B2pkg.h92
1 files changed, 48 insertions, 44 deletions
diff --git a/src/H5B2pkg.h b/src/H5B2pkg.h
index c5af54f..e52ab81 100644
--- a/src/H5B2pkg.h
+++ b/src/H5B2pkg.h
@@ -34,7 +34,7 @@
/* Other private headers needed by this file */
#include "H5ACprivate.h" /* Metadata cache */
#include "H5FLprivate.h" /* Free Lists */
-#include "H5RCprivate.h" /* Reference counted object functions */
+
/**************************/
/* Package Private Macros */
@@ -98,13 +98,18 @@
)
/* Macro to retrieve pointer to i'th native record for native record buffer */
-#define H5B2_NAT_NREC(b, shared, idx) ((b) + (shared)->nat_off[(idx)])
+#define H5B2_NAT_NREC(b, bt2, idx) ((b) + (bt2)->nat_off[(idx)])
/* Macro to retrieve pointer to i'th native record for internal node */
-#define H5B2_INT_NREC(i, shared, idx) H5B2_NAT_NREC((i)->int_native, (shared), (idx))
+#define H5B2_INT_NREC(i, bt2, idx) H5B2_NAT_NREC((i)->int_native, (bt2), (idx))
/* Macro to retrieve pointer to i'th native record for leaf node */
-#define H5B2_LEAF_NREC(l, shared, idx) H5B2_NAT_NREC((l)->leaf_native, (shared), (idx))
+#define H5B2_LEAF_NREC(l, bt2, idx) H5B2_NAT_NREC((l)->leaf_native, (bt2), (idx))
+
+/* Number of records that fit into internal node */
+/* (accounts for extra node pointer by counting it in with the prefix bytes) */
+#define H5B2_NUM_INT_REC(f, s, d) \
+ (((s)->node_size - (H5B2_INT_PREFIX_SIZE + H5B2_INT_POINTER_SIZE(f, s, d))) / ((s)->rrec_size + H5B2_INT_POINTER_SIZE(f, s, d)))
/****************************/
@@ -129,15 +134,13 @@ typedef struct {
H5FL_fac_head_t *node_ptr_fac; /* Factory for node pointer blocks */
} H5B2_node_info_t;
-/* Each B-tree has certain information that can be shared across all
- * the instances of nodes in that B-tree.
- */
-typedef struct H5B2_shared_t {
- /* Shared internal data structures */
- const H5B2_class_t *type; /* Type of tree */
- uint8_t *page; /* Common disk page for I/O */
- size_t *nat_off; /* Array of offsets of native records */
- H5B2_node_info_t *node_info; /* Table of node info structs for current depth of B-tree */
+/* The B-tree information */
+typedef struct H5B2_t {
+ /* Information for H5AC cache functions, _must_ be first field in structure */
+ H5AC_info_t cache_info;
+
+ /* Internal B-tree information (stored) */
+ H5B2_node_ptr_t root; /* Node pointer to root node in B-tree */
/* Information set by user (stored) */
unsigned split_percent; /* Percent full at which to split the node, when inserting */
@@ -148,18 +151,16 @@ typedef struct H5B2_shared_t {
/* Dynamic information (stored) */
unsigned depth; /* B-tree's overall depth */
- /* Derived information from user's information */
+ /* Derived information from user's information (not stored) */
uint8_t max_nrec_size; /* Size to store max. # of records in any node (in bytes) */
-} H5B2_shared_t;
-
-/* The B-tree information */
-typedef struct H5B2_t {
- /* Information for H5AC cache functions, _must_ be first field in structure */
- H5AC_info_t cache_info;
- /* Internal B-tree information */
- H5B2_node_ptr_t root; /* Node pointer to root node in B-tree */
- H5RC_t *shared; /* Ref-counted shared info */
+ /* Shared internal data structures (not stored) */
+ H5F_t *f; /* Pointer to the file that the B-tree is in */
+ size_t rc; /* Reference count of nodes using this header */
+ const H5B2_class_t *type; /* Type of tree */
+ uint8_t *page; /* Common disk page for I/O */
+ size_t *nat_off; /* Array of offsets of native records */
+ H5B2_node_info_t *node_info; /* Table of node info structs for current depth of B-tree */
} H5B2_t;
/* B-tree leaf node information */
@@ -168,7 +169,7 @@ typedef struct H5B2_leaf_t {
H5AC_info_t cache_info;
/* Internal B-tree information */
- H5RC_t *shared; /* Ref-counted shared info */
+ H5B2_t *bt2; /* Pointer to the [pinned] v2 B-tree header */
uint8_t *leaf_native; /* Pointer to native records */
unsigned nrec; /* Number of records in node */
} H5B2_leaf_t;
@@ -179,7 +180,7 @@ typedef struct H5B2_internal_t {
H5AC_info_t cache_info;
/* Internal B-tree information */
- H5RC_t *shared; /* Ref-counted shared info */
+ H5B2_t *bt2; /* Pointer to the [pinned] v2 B-tree header */
uint8_t *int_native; /* Pointer to native records */
H5B2_node_ptr_t *node_ptrs; /* Pointer to node pointers */
unsigned nrec; /* Number of records in node */
@@ -188,9 +189,9 @@ typedef struct H5B2_internal_t {
/* User data for metadata cache 'load' callback */
typedef struct {
- H5RC_t *bt2_shared; /* Ref counter for shared B-tree info */
- unsigned nrec; /* Number of records in node to load */
- unsigned depth; /* Depth of node to load */
+ H5B2_t *bt2; /* Pointer to the [pinned] v2 B-tree header */
+ unsigned nrec; /* Number of records in node to load */
+ unsigned depth; /* Depth of node to load */
} H5B2_int_load_ud1_t;
#ifdef H5B2_TESTING
@@ -234,64 +235,67 @@ H5_DLLVAR const H5B2_class_t H5B2_TEST[1];
/* Package Private Prototypes */
/******************************/
-/* Routines for managing shared B-tree info */
-H5_DLL herr_t H5B2_shared_init(H5F_t *f, H5B2_t *bt2, const H5B2_class_t *type,
+/* Routines for managing B-tree header info */
+H5_DLL herr_t H5B2_hdr_incr(H5B2_t *bt2);
+H5_DLL herr_t H5B2_hdr_decr(H5B2_t *bt2);
+H5_DLL herr_t H5B2_hdr_dirty(H5B2_t *bt2);
+H5_DLL herr_t H5B2_hdr_init(H5F_t *f, H5B2_t *bt2, const H5B2_class_t *type,
unsigned depth, size_t node_size, size_t rrec_size,
unsigned split_percent, unsigned merge_percent);
+H5_DLL herr_t H5B2_hdr_free(H5B2_t *bt2);
/* Routines for operating on internal nodes */
H5_DLL H5B2_internal_t *H5B2_protect_internal(H5F_t *f, hid_t dxpl_id,
- H5RC_t *bt2_shared, haddr_t addr, unsigned nrec, unsigned depth,
- H5AC_protect_t rw);
+ H5B2_t *bt2, haddr_t addr, unsigned nrec, unsigned depth, H5AC_protect_t rw);
/* Routines for allocating nodes */
H5_DLL herr_t H5B2_split_root(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2,
unsigned *bt2_flags_ptr);
-H5_DLL herr_t H5B2_create_leaf(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
+H5_DLL herr_t H5B2_create_leaf(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2,
H5B2_node_ptr_t *node_ptr);
/* Routines for inserting records */
-H5_DLL herr_t H5B2_insert_internal(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
+H5_DLL herr_t H5B2_insert_internal(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2,
unsigned depth, unsigned *parent_cache_info_flags_ptr,
H5B2_node_ptr_t *curr_node_ptr, void *udata);
-H5_DLL herr_t H5B2_insert_leaf(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
+H5_DLL herr_t H5B2_insert_leaf(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2,
H5B2_node_ptr_t *curr_node_ptr, void *udata);
/* Routines for iterating over nodes/records */
-H5_DLL herr_t H5B2_iterate_node(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
+H5_DLL herr_t H5B2_iterate_node(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2,
unsigned depth, const H5B2_node_ptr_t *curr_node, H5B2_operator_t op,
void *op_data);
-H5_DLL herr_t H5B2_iterate_size_node(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
+H5_DLL herr_t H5B2_iterate_size_node(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2,
unsigned depth, const H5B2_node_ptr_t *curr_node, hsize_t *op_data);
/* Routines for locating records */
H5_DLL int H5B2_locate_record(const H5B2_class_t *type, unsigned nrec,
size_t *rec_off, const uint8_t *native, const void *udata, unsigned *idx);
-H5_DLL herr_t H5B2_neighbor_internal(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
+H5_DLL herr_t H5B2_neighbor_internal(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2,
unsigned depth, H5B2_node_ptr_t *curr_node_ptr, void *neighbor_loc,
H5B2_compare_t comp, void *udata, H5B2_found_t op, void *op_data);
-H5_DLL herr_t H5B2_neighbor_leaf(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
+H5_DLL herr_t H5B2_neighbor_leaf(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2,
H5B2_node_ptr_t *curr_node_ptr, void *neighbor_loc,
H5B2_compare_t comp, void *udata, H5B2_found_t op, void *op_data);
/* Routines for removing records */
-H5_DLL herr_t H5B2_remove_internal(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
+H5_DLL herr_t H5B2_remove_internal(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2,
hbool_t *depth_decreased, void *swap_loc, unsigned depth, H5AC_info_t *parent_cache_info,
hbool_t * parent_cache_info_dirtied_ptr, H5B2_node_ptr_t *curr_node_ptr, void *udata,
H5B2_remove_t op, void *op_data);
-H5_DLL herr_t H5B2_remove_leaf(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
+H5_DLL herr_t H5B2_remove_leaf(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2,
H5B2_node_ptr_t *curr_node_ptr, void *udata, H5B2_remove_t op,
void *op_data);
-H5_DLL herr_t H5B2_remove_internal_by_idx(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
+H5_DLL herr_t H5B2_remove_internal_by_idx(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2,
hbool_t *depth_decreased, void *swap_loc, unsigned depth, H5AC_info_t *parent_cache_info,
hbool_t * parent_cache_info_dirtied_ptr, H5B2_node_ptr_t *curr_node_ptr, hsize_t idx,
H5B2_remove_t op, void *op_data);
-H5_DLL herr_t H5B2_remove_leaf_by_idx(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
+H5_DLL herr_t H5B2_remove_leaf_by_idx(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2,
H5B2_node_ptr_t *curr_node_ptr, unsigned idx, H5B2_remove_t op,
void *op_data);
/* Routines for deleting nodes */
-H5_DLL herr_t H5B2_delete_node(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
+H5_DLL herr_t H5B2_delete_node(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2,
unsigned depth, const H5B2_node_ptr_t *curr_node, H5B2_remove_t op,
void *op_data);