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authorQuincey Koziol <koziol@hdfgroup.org>2008-12-18 13:43:21 (GMT)
committerQuincey Koziol <koziol@hdfgroup.org>2008-12-18 13:43:21 (GMT)
commite77303f48370403e04b4185aa54fb6417e1e52fa (patch)
tree57c03b720dc5e8273f147c7dd80806b8aa12b15b /src/H5Bdbg.c
parent86fb2794d6b12431edcd2a57f6c048e7e1c4e628 (diff)
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[svn-r16204] Description:
Moved v1 B-tree debugging routines into separate module and thinned out header files a bit. Tested on: Mac OS X/32 10.5.5 (amazon) in debug mode Mac OS X/32 10.5.5 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
Diffstat (limited to 'src/H5Bdbg.c')
-rw-r--r--src/H5Bdbg.c284
1 files changed, 284 insertions, 0 deletions
diff --git a/src/H5Bdbg.c b/src/H5Bdbg.c
new file mode 100644
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+++ b/src/H5Bdbg.c
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+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the files COPYING and Copyright.html. COPYING can be found at the root *
+ * of the source code distribution tree; Copyright.html can be found at the *
+ * root level of an installed copy of the electronic HDF5 document set and *
+ * is linked from the top-level documents page. It can also be found at *
+ * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
+ * access to either file, you may request a copy from help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/*-------------------------------------------------------------------------
+ *
+ * Created: H5Bdbg.c
+ * Dec 11 2008
+ * Quincey Koziol <koziol@hdfgroup.org>
+ *
+ * Purpose: Debugging routines for B-link tree package.
+ *
+ *-------------------------------------------------------------------------
+ */
+
+/****************/
+/* Module Setup */
+/****************/
+
+#define H5B_PACKAGE /*suppress error about including H5Bpkg */
+
+/***********/
+/* Headers */
+/***********/
+#include "H5private.h" /* Generic Functions */
+#include "H5Bpkg.h" /* B-link trees */
+#include "H5Eprivate.h" /* Error handling */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5B_debug
+ *
+ * Purpose: Prints debugging info about a B-tree.
+ *
+ * Return: Non-negative on success/Negative on failure
+ *
+ * Programmer: Robb Matzke
+ * matzke@llnl.gov
+ * Aug 4 1997
+ *
+ * Modifications:
+ * Robb Matzke, 1999-07-28
+ * The ADDR argument is passed by value.
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5B_debug(H5F_t *f, hid_t dxpl_id, haddr_t addr, FILE *stream, int indent, int fwidth,
+ const H5B_class_t *type, void *udata)
+{
+ H5B_t *bt = NULL;
+ H5B_shared_t *shared; /* Pointer to shared B-tree info */
+ unsigned u; /* Local index variable */
+ herr_t ret_value=SUCCEED; /* Return value */
+
+ FUNC_ENTER_NOAPI(H5B_debug, FAIL)
+
+ /*
+ * Check arguments.
+ */
+ assert(f);
+ assert(H5F_addr_defined(addr));
+ assert(stream);
+ assert(indent >= 0);
+ assert(fwidth >= 0);
+ assert(type);
+
+ /*
+ * Load the tree node.
+ */
+ if (NULL == (bt = (H5B_t *)H5AC_protect(f, dxpl_id, H5AC_BT, addr, type, udata, H5AC_READ)))
+ HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree node")
+ shared=(H5B_shared_t *)H5RC_GET_OBJ(bt->rc_shared);
+ HDassert(shared);
+
+ /*
+ * Print the values.
+ */
+ HDfprintf(stream, "%*s%-*s %s\n", indent, "", fwidth,
+ "Tree type ID:",
+ ((shared->type->id)==H5B_SNODE_ID ? "H5B_SNODE_ID" :
+ ((shared->type->id)==H5B_CHUNK_ID ? "H5B_CHUNK_ID" : "Unknown!")));
+ HDfprintf(stream, "%*s%-*s %Zu\n", indent, "", fwidth,
+ "Size of node:",
+ shared->sizeof_rnode);
+ HDfprintf(stream, "%*s%-*s %Zu\n", indent, "", fwidth,
+ "Size of raw (disk) key:",
+ shared->sizeof_rkey);
+ HDfprintf(stream, "%*s%-*s %s\n", indent, "", fwidth,
+ "Dirty flag:",
+ bt->cache_info.is_dirty ? "True" : "False");
+ HDfprintf(stream, "%*s%-*s %u\n", indent, "", fwidth,
+ "Level:",
+ bt->level);
+
+ HDfprintf(stream, "%*s%-*s %a\n", indent, "", fwidth,
+ "Address of left sibling:",
+ bt->left);
+
+ HDfprintf(stream, "%*s%-*s %a\n", indent, "", fwidth,
+ "Address of right sibling:",
+ bt->right);
+
+ HDfprintf(stream, "%*s%-*s %u (%u)\n", indent, "", fwidth,
+ "Number of children (max):",
+ bt->nchildren, shared->two_k);
+
+ /*
+ * Print the child addresses
+ */
+ for (u = 0; u < bt->nchildren; u++) {
+ HDfprintf(stream, "%*sChild %d...\n", indent, "", u);
+ HDfprintf(stream, "%*s%-*s %a\n", indent + 3, "", MAX(0, fwidth - 3),
+ "Address:", bt->child[u]);
+
+ /* If there is a key debugging routine, use it to display the left & right keys */
+ if (type->debug_key) {
+ /* Decode the 'left' key & print it */
+ HDfprintf(stream, "%*s%-*s\n", indent + 3, "", MAX(0, fwidth - 3),
+ "Left Key:");
+ assert(H5B_NKEY(bt,shared,u));
+ (void)(type->debug_key)(stream, f, dxpl_id, indent+6, MAX (0, fwidth-6),
+ H5B_NKEY(bt,shared,u), udata);
+
+ /* Decode the 'right' key & print it */
+ HDfprintf(stream, "%*s%-*s\n", indent + 3, "", MAX(0, fwidth - 3),
+ "Right Key:");
+ assert(H5B_NKEY(bt,shared,u+1));
+ (void)(type->debug_key)(stream, f, dxpl_id, indent+6, MAX (0, fwidth-6),
+ H5B_NKEY(bt,shared,u+1), udata);
+ }
+ }
+
+done:
+ if (bt && H5AC_unprotect(f, dxpl_id, H5AC_BT, addr, bt, H5AC__NO_FLAGS_SET) < 0)
+ HDONE_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree node")
+
+ FUNC_LEAVE_NOAPI(ret_value)
+}
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5B_assert
+ *
+ * Purpose: Verifies that the tree is structured correctly.
+ *
+ * Return: Success: SUCCEED
+ *
+ * Failure: aborts if something is wrong.
+ *
+ * Programmer: Robb Matzke
+ * Tuesday, November 4, 1997
+ *
+ * Modifications:
+ * Robb Matzke, 1999-07-28
+ * The ADDR argument is passed by value.
+ *
+ * John Mainzer, 6/8/05
+ * Modified the function to use the new dirtied parameter of
+ * of H5AC_unprotect() instead of modifying the is_dirty
+ * field of the cache info.
+ *
+ *-------------------------------------------------------------------------
+ */
+#ifdef H5B_DEBUG
+herr_t
+H5B_assert(H5F_t *f, hid_t dxpl_id, haddr_t addr, const H5B_class_t *type, void *udata)
+{
+ H5B_t *bt = NULL;
+ H5B_shared_t *shared; /* Pointer to shared B-tree info */
+ int i, ncell, cmp;
+ static int ncalls = 0;
+ herr_t status;
+ herr_t ret_value=SUCCEED; /* Return value */
+
+ /* A queue of child data */
+ struct child_t {
+ haddr_t addr;
+ unsigned level;
+ struct child_t *next;
+ } *head = NULL, *tail = NULL, *prev = NULL, *cur = NULL, *tmp = NULL;
+
+ FUNC_ENTER_NOAPI(H5B_assert, FAIL)
+
+ if (0==ncalls++) {
+ if (H5DEBUG(B)) {
+ fprintf(H5DEBUG(B), "H5B: debugging B-trees (expensive)\n");
+ }
+ }
+ /* Initialize the queue */
+ bt = (H5B_t *)H5AC_protect(f, dxpl_id, H5AC_BT, addr, type, udata, H5AC_READ);
+ assert(bt);
+ shared=(H5B_shared_t *)H5RC_GET_OBJ(bt->rc_shared);
+ HDassert(shared);
+ cur = H5MM_calloc(sizeof(struct child_t));
+ assert (cur);
+ cur->addr = addr;
+ cur->level = bt->level;
+ head = tail = cur;
+
+ status = H5AC_unprotect(f, dxpl_id, H5AC_BT, addr, bt, H5AC__NO_FLAGS_SET);
+ assert(status >= 0);
+ bt=NULL; /* Make certain future references will be caught */
+
+ /*
+ * Do a breadth-first search of the tree. New nodes are added to the end
+ * of the queue as the `cur' pointer is advanced toward the end. We don't
+ * remove any nodes from the queue because we need them in the uniqueness
+ * test.
+ */
+ for (ncell = 0; cur; ncell++) {
+ bt = (H5B_t *)H5AC_protect(f, dxpl_id, H5AC_BT, cur->addr, type, udata, H5AC_READ);
+ assert(bt);
+
+ /* Check node header */
+ assert(bt->level == cur->level);
+ if (cur->next && cur->next->level == bt->level) {
+ assert(H5F_addr_eq(bt->right, cur->next->addr));
+ } else {
+ assert(!H5F_addr_defined(bt->right));
+ }
+ if (prev && prev->level == bt->level) {
+ assert(H5F_addr_eq(bt->left, prev->addr));
+ } else {
+ assert(!H5F_addr_defined(bt->left));
+ }
+
+ if (cur->level > 0) {
+ for (i = 0; i < bt->nchildren; i++) {
+
+ /*
+ * Check that child nodes haven't already been seen. If they
+ * have then the tree has a cycle.
+ */
+ for (tmp = head; tmp; tmp = tmp->next) {
+ assert(H5F_addr_ne(tmp->addr, bt->child[i]));
+ }
+
+ /* Add the child node to the end of the queue */
+ tmp = H5MM_calloc(sizeof(struct child_t));
+ assert (tmp);
+ tmp->addr = bt->child[i];
+ tmp->level = bt->level - 1;
+ tail->next = tmp;
+ tail = tmp;
+
+ /* Check that the keys are monotonically increasing */
+ cmp = (type->cmp2) (f, dxpl_id, H5B_NKEY(bt,shared,i), udata,
+ H5B_NKEY(bt,shared,i+1));
+ assert(cmp < 0);
+ }
+ }
+ /* Release node */
+ status = H5AC_unprotect(f, dxpl_id, H5AC_BT, cur->addr, bt, H5AC__NO_FLAGS_SET);
+ assert(status >= 0);
+ bt=NULL; /* Make certain future references will be caught */
+
+ /* Advance current location in queue */
+ prev = cur;
+ cur = cur->next;
+ }
+
+ /* Free all entries from queue */
+ while (head) {
+ tmp = head->next;
+ H5MM_xfree(head);
+ head = tmp;
+ }
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+}
+#endif /* H5B_DEBUG */
+