diff options
author | Dana Robinson <43805+derobins@users.noreply.github.com> | 2021-07-12 20:30:20 (GMT) |
---|---|---|
committer | GitHub <noreply@github.com> | 2021-07-12 20:30:20 (GMT) |
commit | eebaee65290de59a4fbf1a426df09e32872d9efc (patch) | |
tree | ad1ed5e22cf84e5ab9981e5f798d96ee2dc2a389 /src/H5Dchunk.c | |
parent | b9dbabc1523c13627ada0bcb04d780e7ad93b658 (diff) | |
download | hdf5-eebaee65290de59a4fbf1a426df09e32872d9efc.zip hdf5-eebaee65290de59a4fbf1a426df09e32872d9efc.tar.gz hdf5-eebaee65290de59a4fbf1a426df09e32872d9efc.tar.bz2 |
VFD SWMR: sync with develop (#830)
* Normalization with develop
* Removes checks and work-arounds for strtoll and strtoull (#769)
* Removes checks for (v)snprintf, which are C99 (#772)
* Update missing release note info. (#776)
* Replaces the H5_OVERRIDE macro with override (#773)
The macro is no longer necessary now that we require C++11.
* Cleans up some POSIX header bits in H5private.h (#783)
* Removes outdated checks for ways inline might be defined (#781)
These are obsolete now that we require C99.
* Removes checks for system(), which is C89/90 (#782)
* Removes C++ dependency on H5private.h (#774)
* Removes C++ dependency on H5private.h
Most C API calls have been removed, aside from a few uses of free,
where we just dropped the 'HD'. A couple of H5_ATTR_UNUSED macros
were also replaced with (void) statements.
* Committing clang-format changes
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Further simplifies Autotools type size checks (#789)
Also fixes an issue where clock_gettime and difftime are not detected
due to earlier simplifications of this code.
* Release Note (#784)
* Normalization of CMake H5pubconf.h with Autotools (#791)
Mostly just moving things around and changing the comments to keep the
delta small. The only symbol change is that for curl/curl.h which I
changed to H5_HAVE_CURL_CURL_H to match the Autotools. This symbol
is not used in the library and is just an artifact of the checks.
* Fix tools test (#794)
* Removes ancient Autotools cruft (#790)
* Reorganization of C and POSIX headers in H5public.h & H5private.h (#793)
* Reorganization of C and POSIX headers in H5public.h & H5private.h
Consolidated and removed duplicates
* It turns out Windows has sys/types.h
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
* Removes checks for signal and set/longjmp, which are C89 (#798)
Also removes checks for setjmp.h and stddef.h
* Assume frexpl/f and fabsl/f, which are C99 (#799)
* Assume the library has C99 types in C++ type code (#806)
* Assume the library has C99 types in C++ type code
* Committing clang-format changes
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Removes obsolete equivalents of C99's __func__ (#800)
* Cleans up POSIX/C bits in H5private.h (#804)
* Cleans up POSIX/C bits in H5private.h
* Assume difftime exists (C89)
* Reorg AC_CHECK_HEADERS so headers are in alphabetical order
* Split off networking-related AC_CHECK_HEADERS
* Remove unused UNAME_CYGWIN from configure.ac
* Remove checks for unused sys/timeb.h
* Tidying pass over H5private.h HD prefix macros
* Tidy H5win32defs.h
* Add HD prefix to various scanf calls
* Committing clang-format changes
* Fixes to the alarm(2) code used in the tests to make Windows happy
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Brings the tools getopt(3) replacement into the main library (#803)
* Moves get_option from the tools library to the C library
* Adds H5 prefix to get_option call and variables
* Renames the H5_get_option long options struct and enum
* Removes type guesses when C99 types are missing (#807)
* Assume C99 types exist in H5detect.c (#808)
* Fixes parallel issues from recent C99 changes
* Adds MPE FUNC --> __func__ changes missed in earlier PRs
* Fix typo
* Fixes parallel issues from recent C99 changes (#809)
* Fixes parallel issues from recent C99 changes
* Adds MPE FUNC --> __func__ changes missed in earlier PRs
* Even more missed FUNC --> __func__ macros
* Removes remaining H5_TIME_WITH_SYS_TIME cruft (#810)
Mostly from CMake
* Merges with develop
* Committing clang-format changes
* Normalization with develop
* direct_chunk test and H5Dget_chunk_storage_size changes
* Removes unused H5O call
* Brings some dataspace changes from the combo branch merge
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
Diffstat (limited to 'src/H5Dchunk.c')
-rw-r--r-- | src/H5Dchunk.c | 67 |
1 files changed, 33 insertions, 34 deletions
diff --git a/src/H5Dchunk.c b/src/H5Dchunk.c index d6eb715..5fc7abb 100644 --- a/src/H5Dchunk.c +++ b/src/H5Dchunk.c @@ -604,8 +604,6 @@ H5D__get_chunk_storage_size(H5D_t *dset, const hsize_t *offset, hsize_t *storage HDassert(offset); HDassert(storage_size); - *storage_size = 0; - /* Allocate dataspace and initialize it if it hasn't been. */ if (!(*layout->ops->is_space_alloc)(&layout->storage)) HGOTO_DONE(SUCCEED) @@ -5031,7 +5029,7 @@ H5D__chunk_collective_fill(const H5D_t *dset, H5D_chunk_coll_info_t *chunk_info, * order of offset in the file. */ if (need_addr_sort) - HDqsort(chunk_disp_array, blocks, sizeof(MPI_Aint), H5D__chunk_cmp_addr); + HDqsort(chunk_disp_array, (size_t)blocks, sizeof(MPI_Aint), H5D__chunk_cmp_addr); /* MSC - should use this if MPI_type_create_hindexed block is working: * mpi_code = MPI_Type_create_hindexed_block(blocks, block_len, chunk_disp_array, MPI_BYTE, @@ -6066,6 +6064,7 @@ H5D__chunk_copy_cb(const H5D_chunk_rec_t *chunk_rec, void *_udata) if (udata->chunk_in_cache) { HDassert(H5F_addr_defined(chunk_rec->chunk_addr)); + HDassert(ent); HDassert(H5F_addr_defined(ent->chunk_block.offset)); H5_CHECKED_ASSIGN(nbytes, size_t, shared_fo->layout.u.chunk.size, uint32_t); @@ -7499,6 +7498,36 @@ done: } /* end H5D__get_chunk_info_by_coord() */ /*------------------------------------------------------------------------- + * Function: H5D__chunk_iter_cb + * + * Purpose: Call the user-defined function with the chunk data. The iterator continues if + * the user-defined function returns H5_ITER_CONT, and stops if H5_ITER_STOP is + * returned. + * + * Return: Success: H5_ITER_CONT or H5_ITER_STOP + * Failure: Negative (H5_ITER_ERROR) + * + * Programmer: Gaute Hope + * August 2020 + * + *------------------------------------------------------------------------- + */ +static int +H5D__chunk_iter_cb(const H5D_chunk_rec_t *chunk_rec, void *udata) +{ + int ret_value = 0; + + FUNC_ENTER_STATIC_NOERR + + const H5D_chunk_iter_cb_data_t *data = (H5D_chunk_iter_cb_data_t *)udata; + + ret_value = (data->cb)(chunk_rec->scaled, chunk_rec->filter_mask, chunk_rec->chunk_addr, + chunk_rec->nbytes, data->op_data); + + FUNC_LEAVE_NOAPI(ret_value) +} /* end H5D__chunk_iter_cb */ + +/*------------------------------------------------------------------------- * Function: H5D__chunk_iter * * Purpose: Iterate over all the chunks in the dataset with given callbak. @@ -7537,7 +7566,7 @@ H5D__chunk_iter(const H5D_t *dset, H5D_chunk_iter_op_t cb, void *op_data) for (ent = rdcc->head; ent; ent = ent->next) /* Flush the chunk out to disk, to make certain the size is correct later */ if (H5D__chunk_flush_entry(dset, ent, FALSE) < 0) - HGOTO_ERROR(H5E_IO, H5E_WRITEERROR, FAIL, "cannot flush indexed storage buffer") + HGOTO_ERROR(H5E_DATASET, H5E_CANTFLUSH, FAIL, "cannot flush indexed storage buffer") /* Compose chunked index info struct */ idx_info.f = dset->oloc.file; @@ -7559,33 +7588,3 @@ H5D__chunk_iter(const H5D_t *dset, H5D_chunk_iter_op_t cb, void *op_data) done: FUNC_LEAVE_NOAPI_TAG(ret_value) } /* end H5D__chunk_iter() */ - -/*------------------------------------------------------------------------- - * Function: H5D__chunk_iter_cb - * - * Purpose: Call the user-defined function with the chunk data. The iterator continues if - * the user-defined function returns H5_ITER_CONT, and stops if H5_ITER_STOP is - * returned. - * - * Return: Success: H5_ITER_CONT or H5_ITER_STOP - * Failure: Negative (H5_ITER_ERROR) - * - * Programmer: Gaute Hope - * August 2020 - * - *------------------------------------------------------------------------- - */ -static int -H5D__chunk_iter_cb(const H5D_chunk_rec_t *chunk_rec, void *udata) -{ - int ret_value = 0; - - FUNC_ENTER_STATIC_NOERR - - const H5D_chunk_iter_cb_data_t *data = (H5D_chunk_iter_cb_data_t *)udata; - - ret_value = (data->cb)(chunk_rec->scaled, chunk_rec->filter_mask, chunk_rec->chunk_addr, - chunk_rec->nbytes, data->op_data); - - FUNC_LEAVE_NOAPI(ret_value) -} /* end H5D__chunk_iter_cb */ |