Sync 1.14 branch with develop (#3923)

* Fix build error on freebsd (#3883)

Fixes:

checking for config freebsd12.1... no
checking for config freebsd... found
compiler '/home/svcpetsc/petsc-hash-pkgs/39f577/bin/mpicc' is GNU gcc-9.2.0
compiler '/home/svcpetsc/petsc-hash-pkgs/39f577/bin/mpif90' is GNU gfortran-9.2.0
stdout: .: cannot open ./config/classic-fflags: No such file or directory

* Correct CMake command and example packaging (#3888)

* Feat: Hashpin sensitive dependencies on GitHub Actions and enable Dependabot to update them monthly (#3892)

* feat: hashpin sensitive dependencies on GHAs

Signed-off-by: Diogo Teles Sant'Anna <diogoteles@google.com>

* feat: enable dependabot for monthly updates on GHA

Signed-off-by: Diogo Teles Sant'Anna <diogoteles@google.com>

---------

Signed-off-by: Diogo Teles Sant'Anna <diogoteles@google.com>

* Some changes to portal links when they could be found on docs.hdfgroup.org, and changed the helpdesk link to help.hdfgroup.org (#3893)

* Updated some portal links to go directly to docs.hdfgroup. 

* Fixed some portal and help desk links

* Add variable option syncing for examples (#3885)

* Add period(.) at the end of the sentence for consistency. (#3897)

* Remove redundant backslash character from comment. (#3899)

* Disable doxygen as errors for netcdf (#3900)

* disable building doxygen for netcdf test

* Doc versions (#3903)

* Added missing \since tags to H5D.

* Committing clang-format changes

* Fixed H5T version info.

* Committing clang-format changes

* Added missing version info to H5E.

* Committing clang-format changes

* Added version info to H5F public APIs.

* Committing clang-format changes

* Added missing H5Z public API version info.

* Added missing version info to H5G public APIs

* Added missing version info to H5I public API.

* Added missing version info to H5 public APIs

* Committing clang-format changes

* Added missing version info to H5P public APIs

* Added missing version info to H5R public APIs

* Fix comment error.

* Committing clang-format changes

---------

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Change Trouble Shooting to Troubleshooting (#3905)

* Implement optimized support for vector I/O in Subfiling VFD (#3896)

Vector I/O requests are now processed within a single
set of I/O call batches, rather than each I/O vector
entry (tuple constructed from the types, addrs, sizes
and bufs arrays) being processed individually. This allows I/O to be
more efficiently parallelized among the I/O concentrator processes
during large I/O requests.

* Fixed some calculations and add test cases for issues spotted from review

* Removed a variable that was compensating for previous miscalculations

* Add 'warning density' computation to the warnhist script (#3910)

* Add 'warning density' computation to the warnhist script, along with several
cleanups to it.   Add "--enable-show-all-warnings" configure (and CMake)
option to disable compiler diagnostic suppression (and therefore show all the
otherwise suppressed compiler diagnostics), disabled by default.  Clean up
a buncn of misc. warnings.

Signed-off-by: Quincey Koziol <qkoziol@amazon.com>

* Added H5Fdelete_f with test (#3912)

* New Fortran Examples added (#3916)

* added subfiling example

* Added filtered writes with no selection example

* Version and space corrections.

* Restore H5_VERSION definition in configure.ac.

* renamed defined H5_VERS* to avoid conflicts (#3926)

1 files changed, 20 insertions, 0 deletions

diff --git a/src/H5Epublic.h b/src/H5Epublic.h
index b6cc1cb..a22c9c6 100644
--- a/src/H5Epublic.h
+++ b/src/H5Epublic.h
@@ -697,6 +697,9 @@ typedef struct H5E_error1_t {
  * \param[in] client_data Pointer to client data in the format expected by the
  *                        user-defined function
  * \return \herr_t
+ *
+ * \since 1.0.0
+ *
  */
 typedef herr_t (*H5E_walk1_t)(int n, H5E_error1_t *err_desc, void *client_data);
 //! <!-- [H5E_walk1_t_snip] -->
@@ -708,6 +711,9 @@ typedef herr_t (*H5E_walk1_t)(int n, H5E_error1_t *err_desc, void *client_data);
  * \param[in] client_data Pointer to client data in the format expected by the
  *                        user-defined function
  * \return \herr_t
+ *
+ * \since 1.0.0
+ *
  */
 typedef herr_t (*H5E_auto1_t)(void *client_data);
 //! <!-- [H5E_auto1_t_snip] -->
@@ -728,6 +734,8 @@ typedef herr_t (*H5E_auto1_t)(void *client_data);
  *          The stack is also cleared whenever an API function is called, with
  *          certain exceptions (for instance, H5Eprint1()).
  *
+ * \since 1.0.0
+ *
  */
 H5_DLL herr_t H5Eclear1(void);
 /**
@@ -772,6 +780,8 @@ H5_DLL herr_t H5Eclear1(void);
  *          H5Eprint2(), mixing H5Eset_auto1() and H5Eget_auto2() or mixing
  *          H5Eset_auto2() and H5Eget_auto1() does not fail.
  *
+ * \since 1.0.0
+ *
  */
 H5_DLL herr_t H5Eget_auto1(H5E_auto1_t *func, void **client_data);
 /**
@@ -826,6 +836,8 @@ H5_DLL herr_t H5Epush1(const char *file, const char *func, unsigned line, H5E_ma
  *          that prints error messages. Users are encouraged to write their own
  *          more specific error handlers.
  *
+ * \since 1.0.0
+ *
  */
 H5_DLL herr_t H5Eprint1(FILE *stream);
 /**
@@ -857,6 +869,8 @@ H5_DLL herr_t H5Eprint1(FILE *stream);
  *          Automatic stack traversal is always in the #H5E_WALK_DOWNWARD
  *          direction.
  *
+ * \since 1.0.0
+ *
  */
 H5_DLL herr_t H5Eset_auto1(H5E_auto1_t func, void *client_data);
 /**
@@ -890,6 +904,8 @@ H5_DLL herr_t H5Eset_auto1(H5E_auto1_t func, void *client_data);
  *          is as follows:
  *          \snippet this H5E_walk1_t_snip
  *
+ * \since 1.0.0
+ *
  */
 H5_DLL herr_t H5Ewalk1(H5E_direction_t direction, H5E_walk1_t func, void *client_data);
 /**
@@ -911,6 +927,8 @@ H5_DLL herr_t H5Ewalk1(H5E_direction_t direction, H5E_walk1_t func, void *client
  *            array). An application calling this function must free the memory
  *            associated with the return value to prevent a memory leak.
  *
+ * \since 1.0.0
+ *
  */
 H5_DLL char *H5Eget_major(H5E_major_t maj);
 /**
@@ -934,6 +952,8 @@ H5_DLL char *H5Eget_major(H5E_major_t maj);
  *            the memory associated with the return value to prevent a memory
  *            leak. This is a change from the 1.6.x release series.
  *
+ * \since 1.0.0
+ *
  */
 H5_DLL char *H5Eget_minor(H5E_minor_t min);
 #endif /* H5_NO_DEPRECATED_SYMBOLS */