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authorScot Breitenfeld <brtnfld@hdfgroup.org>2023-10-08 01:16:30 (GMT)
committerGitHub <noreply@github.com>2023-10-08 01:16:30 (GMT)
commit6edd9a0aab0d80b64b6038ba2942315cdcc4d0db (patch)
tree1af0eb10740c59c87e14d8b11d32ae8f61894c48 /src/H5FDmpio.c
parent07347cc5dd62b75587eff7db30c6420de4b9b73f (diff)
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Drop MPI-2 support (#3643)
Diffstat (limited to 'src/H5FDmpio.c')
-rw-r--r--src/H5FDmpio.c162
1 files changed, 32 insertions, 130 deletions
diff --git a/src/H5FDmpio.c b/src/H5FDmpio.c
index dfcb30c..5e2668b 100644
--- a/src/H5FDmpio.c
+++ b/src/H5FDmpio.c
@@ -11,7 +11,7 @@
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
- * Purpose: This is the MPI-2 I/O driver.
+ * Purpose: This is the MPI I/O driver.
*/
#include "H5FDdrvr_module.h" /* This source code file is part of the H5FD driver module */
@@ -363,12 +363,12 @@ H5FD__mpio_term(void)
* only in the parallel HDF5 library and is not collective.
*
* comm is the MPI communicator to be used for file open as
- * defined in MPI_FILE_OPEN of MPI-2. This function makes a
+ * defined in MPI_FILE_OPEN of MPI. This function makes a
* duplicate of comm. Any modification to comm after this function
* call returns has no effect on the access property list.
*
* info is the MPI Info object to be used for file open as
- * defined in MPI_FILE_OPEN of MPI-2. This function makes a
+ * defined in MPI_FILE_OPEN of MPI. This function makes a
* duplicate of info. Any modification to info after this
* function call returns has no effect on the access property
* list.
@@ -1222,20 +1222,13 @@ H5FD__mpio_read(H5FD_t *_file, H5FD_mem_t H5_ATTR_UNUSED type, hid_t H5_ATTR_UNU
MPI_Status mpi_stat; /* Status from I/O operation */
MPI_Datatype buf_type = MPI_BYTE; /* MPI description of the selection in memory */
int size_i; /* Integer copy of 'size' to read */
-#if H5_CHECK_MPI_VERSION(3, 0)
- MPI_Count bytes_read = 0; /* Number of bytes read in */
- MPI_Count type_size; /* MPI datatype used for I/O's size */
- MPI_Count io_size; /* Actual number of bytes requested */
- MPI_Count n;
-#else
- int bytes_read = 0; /* Number of bytes read in */
- int type_size; /* MPI datatype used for I/O's size */
- int io_size; /* Actual number of bytes requested */
- int n;
-#endif
- bool use_view_this_time = false;
- bool derived_type = false;
- bool rank0_bcast = false; /* If read-with-rank0-and-bcast flag was used */
+ MPI_Count bytes_read = 0; /* Number of bytes read in */
+ MPI_Count type_size; /* MPI datatype used for I/O's size */
+ MPI_Count io_size; /* Actual number of bytes requested */
+ MPI_Count n;
+ bool use_view_this_time = false;
+ bool derived_type = false;
+ bool rank0_bcast = false; /* If read-with-rank0-and-bcast flag was used */
#ifdef H5FDmpio_DEBUG
bool H5FD_mpio_debug_t_flag = (H5FD_mpio_debug_flags_s[(int)'t'] && H5FD_MPIO_TRACE_THIS_RANK(file));
bool H5FD_mpio_debug_r_flag = (H5FD_mpio_debug_flags_s[(int)'r'] && H5FD_MPIO_TRACE_THIS_RANK(file));
@@ -1393,11 +1386,7 @@ H5FD__mpio_read(H5FD_t *_file, H5FD_mem_t H5_ATTR_UNUSED type, hid_t H5_ATTR_UNU
/* Only retrieve bytes read if this rank _actually_ participated in I/O */
if (!rank0_bcast || (rank0_bcast && file->mpi_rank == 0)) {
/* How many bytes were actually read? */
-#if H5_CHECK_MPI_VERSION(3, 0)
if (MPI_SUCCESS != (mpi_code = MPI_Get_elements_x(&mpi_stat, buf_type, &bytes_read))) {
-#else
- if (MPI_SUCCESS != (mpi_code = MPI_Get_elements(&mpi_stat, MPI_BYTE, &bytes_read))) {
-#endif
if (rank0_bcast && file->mpi_rank == 0) {
/* If MPI_Get_elements(_x) fails for a rank 0 bcast strategy,
* push an error, but continue to participate in the following
@@ -1418,19 +1407,11 @@ H5FD__mpio_read(H5FD_t *_file, H5FD_mem_t H5_ATTR_UNUSED type, hid_t H5_ATTR_UNU
* of the data. (QAK - 2019/1/2)
*/
if (rank0_bcast)
-#if H5_CHECK_MPI_VERSION(3, 0)
if (MPI_SUCCESS != MPI_Bcast(&bytes_read, 1, MPI_COUNT, 0, file->comm))
-#else
- if (MPI_SUCCESS != MPI_Bcast(&bytes_read, 1, MPI_INT, 0, file->comm))
-#endif
HMPI_GOTO_ERROR(FAIL, "MPI_Bcast failed", 0)
- /* Get the type's size */
-#if H5_CHECK_MPI_VERSION(3, 0)
+ /* Get the type's size */
if (MPI_SUCCESS != (mpi_code = MPI_Type_size_x(buf_type, &type_size)))
-#else
- if (MPI_SUCCESS != (mpi_code = MPI_Type_size(buf_type, &type_size)))
-#endif
HMPI_GOTO_ERROR(FAIL, "MPI_Type_size failed", mpi_code)
/* Compute the actual number of bytes requested */
@@ -1486,19 +1467,13 @@ static herr_t
H5FD__mpio_write(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED dxpl_id, haddr_t addr, size_t size,
const void *buf)
{
- H5FD_mpio_t *file = (H5FD_mpio_t *)_file;
- MPI_Offset mpi_off;
- MPI_Status mpi_stat; /* Status from I/O operation */
- MPI_Datatype buf_type = MPI_BYTE; /* MPI description of the selection in memory */
-#if H5_CHECK_MPI_VERSION(3, 0)
- MPI_Count bytes_written;
- MPI_Count type_size; /* MPI datatype used for I/O's size */
- MPI_Count io_size; /* Actual number of bytes requested */
-#else
- int bytes_written;
- int type_size; /* MPI datatype used for I/O's size */
- int io_size; /* Actual number of bytes requested */
-#endif
+ H5FD_mpio_t *file = (H5FD_mpio_t *)_file;
+ MPI_Offset mpi_off;
+ MPI_Status mpi_stat; /* Status from I/O operation */
+ MPI_Datatype buf_type = MPI_BYTE; /* MPI description of the selection in memory */
+ MPI_Count bytes_written;
+ MPI_Count type_size; /* MPI datatype used for I/O's size */
+ MPI_Count io_size; /* Actual number of bytes requested */
int size_i;
bool use_view_this_time = false;
bool derived_type = false;
@@ -1642,19 +1617,11 @@ H5FD__mpio_write(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED dxpl_id, h
} /* end else */
/* How many bytes were actually written? */
-#if H5_CHECK_MPI_VERSION(3, 0)
if (MPI_SUCCESS != (mpi_code = MPI_Get_elements_x(&mpi_stat, buf_type, &bytes_written)))
-#else
- if (MPI_SUCCESS != (mpi_code = MPI_Get_elements(&mpi_stat, MPI_BYTE, &bytes_written)))
-#endif
HMPI_GOTO_ERROR(FAIL, "MPI_Get_elements failed", mpi_code)
- /* Get the type's size */
-#if H5_CHECK_MPI_VERSION(3, 0)
+ /* Get the type's size */
if (MPI_SUCCESS != (mpi_code = MPI_Type_size_x(buf_type, &type_size)))
-#else
- if (MPI_SUCCESS != (mpi_code = MPI_Type_size(buf_type, &type_size)))
-#endif
HMPI_GOTO_ERROR(FAIL, "MPI_Type_size failed", mpi_code)
/* Compute the actual number of bytes requested */
@@ -1858,7 +1825,7 @@ H5FD__mpio_vector_build_types(uint32_t count, H5FD_mem_t types[], haddr_t addrs[
HMPI_GOTO_ERROR(FAIL, "MPI_Get_address for s_bufs[] - mpi_bufs_base failed", mpi_code)
/*... and then subtract mpi_bufs_base_Aint from it. */
-#if ((MPI_VERSION > 3) || ((MPI_VERSION == 3) && (MPI_SUBVERSION >= 1)))
+#if H5_CHECK_MPI_VERSION(3, 1)
mpi_bufs[i] = MPI_Aint_diff(mpi_bufs[i], mpi_bufs_base_Aint);
#else
mpi_bufs[i] = mpi_bufs[i] - mpi_bufs_base_Aint;
@@ -2085,18 +2052,11 @@ H5FD__mpio_read_vector(H5FD_t *_file, hid_t H5_ATTR_UNUSED dxpl_id, uint32_t cou
H5FD_mpio_xfer_t xfer_mode; /* I/O transfer mode */
H5FD_mpio_collective_opt_t coll_opt_mode; /* whether we are doing collective or independent I/O */
int size_i;
-#if MPI_VERSION >= 3
- MPI_Count bytes_read = 0; /* Number of bytes read in */
- MPI_Count type_size; /* MPI datatype used for I/O's size */
- MPI_Count io_size; /* Actual number of bytes requested */
- MPI_Count n;
-#else
- int bytes_read = 0; /* Number of bytes read in */
- int type_size; /* MPI datatype used for I/O's size */
- int io_size; /* Actual number of bytes requested */
- int n;
-#endif
- bool rank0_bcast = false; /* If read-with-rank0-and-bcast flag was used */
+ MPI_Count bytes_read = 0; /* Number of bytes read in */
+ MPI_Count type_size; /* MPI datatype used for I/O's size */
+ MPI_Count io_size; /* Actual number of bytes requested */
+ MPI_Count n;
+ bool rank0_bcast = false; /* If read-with-rank0-and-bcast flag was used */
#ifdef H5FDmpio_DEBUG
bool H5FD_mpio_debug_t_flag = (H5FD_mpio_debug_flags_s[(int)'t'] && H5FD_MPIO_TRACE_THIS_RANK(file));
bool H5FD_mpio_debug_r_flag = (H5FD_mpio_debug_flags_s[(int)'r'] && H5FD_MPIO_TRACE_THIS_RANK(file));
@@ -2226,11 +2186,7 @@ H5FD__mpio_read_vector(H5FD_t *_file, hid_t H5_ATTR_UNUSED dxpl_id, uint32_t cou
/* Only retrieve bytes read if this rank _actually_ participated in I/O */
if (!rank0_bcast || (rank0_bcast && file->mpi_rank == 0)) {
/* How many bytes were actually read? */
-#if MPI_VERSION >= 3
if (MPI_SUCCESS != (mpi_code = MPI_Get_elements_x(&mpi_stat, buf_type, &bytes_read)))
-#else
- if (MPI_SUCCESS != (mpi_code = MPI_Get_elements(&mpi_stat, MPI_BYTE, &bytes_read)))
-#endif
HMPI_GOTO_ERROR(FAIL, "MPI_Get_elements failed", mpi_code)
} /* end if */
@@ -2243,19 +2199,11 @@ H5FD__mpio_read_vector(H5FD_t *_file, hid_t H5_ATTR_UNUSED dxpl_id, uint32_t cou
* the bcast. (NAF - 2021/9/15)
*/
if (rank0_bcast)
-#if MPI_VERSION >= 3
if (MPI_SUCCESS != MPI_Bcast(&bytes_read, 1, MPI_COUNT, 0, file->comm))
-#else
- if (MPI_SUCCESS != MPI_Bcast(&bytes_read, 1, MPI_INT, 0, file->comm))
-#endif
HMPI_GOTO_ERROR(FAIL, "MPI_Bcast failed", 0)
- /* Get the type's size */
-#if MPI_VERSION >= 3
+ /* Get the type's size */
if (MPI_SUCCESS != (mpi_code = MPI_Type_size_x(buf_type, &type_size)))
-#else
- if (MPI_SUCCESS != (mpi_code = MPI_Type_size(buf_type, &type_size)))
-#endif
HMPI_GOTO_ERROR(FAIL, "MPI_Type_size failed", mpi_code)
/* Compute the actual number of bytes requested */
@@ -2275,13 +2223,8 @@ H5FD__mpio_read_vector(H5FD_t *_file, hid_t H5_ATTR_UNUSED dxpl_id, uint32_t cou
do {
assert(i >= 0);
-#if MPI_VERSION >= 3
io_size = MIN(n, (MPI_Count)s_sizes[i]);
bytes_read = (MPI_Count)s_sizes[i] - io_size;
-#else
- io_size = MIN(n, (int)s_sizes[i]);
- bytes_read = (int)s_sizes[i] - io_size;
-#endif
assert(bytes_read >= 0);
memset((char *)s_bufs[i] + bytes_read, 0, (size_t)io_size);
@@ -2359,20 +2302,12 @@ H5FD__mpio_read_vector(H5FD_t *_file, hid_t H5_ATTR_UNUSED dxpl_id, uint32_t cou
HMPI_GOTO_ERROR(FAIL, "MPI_File_read_at failed", mpi_code)
- /* How many bytes were actually read? */
-#if MPI_VERSION >= 3
+ /* How many bytes were actually read? */
if (MPI_SUCCESS != (mpi_code = MPI_Get_elements_x(&mpi_stat, MPI_BYTE, &bytes_read)))
-#else
- if (MPI_SUCCESS != (mpi_code = MPI_Get_elements(&mpi_stat, MPI_BYTE, &bytes_read)))
-#endif
HMPI_GOTO_ERROR(FAIL, "MPI_Get_elements failed", mpi_code)
- /* Compute the actual number of bytes requested */
-#if MPI_VERSION >= 3
+ /* Compute the actual number of bytes requested */
io_size = (MPI_Count)size;
-#else
- io_size = (int)size;
-#endif
/* Check for read failure */
if (bytes_read < 0 || bytes_read > io_size)
@@ -3008,18 +2943,11 @@ H5FD__mpio_read_selection(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED d
void *mpi_bufs_base = NULL;
char unused = 0; /* Unused, except for non-NULL pointer value */
-#if H5_CHECK_MPI_VERSION(3, 0)
MPI_Count bytes_read = 0; /* Number of bytes read in */
MPI_Count type_size; /* MPI datatype used for I/O's size */
MPI_Count io_size; /* Actual number of bytes requested */
MPI_Count n;
-#else
- int bytes_read = 0; /* Number of bytes read in */
- int type_size; /* MPI datatype used for I/O's size */
- int io_size; /* Actual number of bytes requested */
- int n;
-#endif
- bool rank0_bcast = false; /* If read-with-rank0-and-bcast flag was used */
+ bool rank0_bcast = false; /* If read-with-rank0-and-bcast flag was used */
#ifdef H5FDmpio_DEBUG
bool H5FD_mpio_debug_t_flag = (H5FD_mpio_debug_flags_s[(int)'t'] && H5FD_MPIO_TRACE_THIS_RANK(file));
bool H5FD_mpio_debug_r_flag = (H5FD_mpio_debug_flags_s[(int)'r'] && H5FD_MPIO_TRACE_THIS_RANK(file));
@@ -3209,11 +3137,7 @@ H5FD__mpio_read_selection(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED d
/* Only retrieve bytes read if this rank _actually_ participated in I/O */
if (!rank0_bcast || (rank0_bcast && file->mpi_rank == 0)) {
/* How many bytes were actually read? */
-#if H5_CHECK_MPI_VERSION(3, 0)
if (MPI_SUCCESS != (mpi_code = MPI_Get_elements_x(&mpi_stat, final_mtype, &bytes_read))) {
-#else
- if (MPI_SUCCESS != (mpi_code = MPI_Get_elements(&mpi_stat, MPI_BYTE, &bytes_read))) {
-#endif
if (rank0_bcast && file->mpi_rank == 0) {
/* If MPI_Get_elements(_x) fails for a rank 0 bcast strategy,
* push an error, but continue to participate in the following
@@ -3234,19 +3158,11 @@ H5FD__mpio_read_selection(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED d
* of the data. (QAK - 2019/1/2)
*/
if (rank0_bcast)
-#if H5_CHECK_MPI_VERSION(3, 0)
if (MPI_SUCCESS != MPI_Bcast(&bytes_read, 1, MPI_COUNT, 0, file->comm))
-#else
- if (MPI_SUCCESS != MPI_Bcast(&bytes_read, 1, MPI_INT, 0, file->comm))
-#endif
HMPI_GOTO_ERROR(FAIL, "MPI_Bcast failed", 0);
- /* Get the type's size */
-#if H5_CHECK_MPI_VERSION(3, 0)
+ /* Get the type's size */
if (MPI_SUCCESS != (mpi_code = MPI_Type_size_x(final_mtype, &type_size)))
-#else
- if (MPI_SUCCESS != (mpi_code = MPI_Type_size(final_mtype, &type_size)))
-#endif
HMPI_GOTO_ERROR(FAIL, "MPI_Type_size failed", mpi_code);
/* Compute the actual number of bytes requested */
@@ -3382,15 +3298,9 @@ H5FD__mpio_write_selection(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED
char unused = 0; /* Unused, except for non-NULL pointer value */
H5_flexible_const_ptr_t mbb;
-#if H5_CHECK_MPI_VERSION(3, 0)
MPI_Count bytes_written;
MPI_Count type_size; /* MPI datatype used for I/O's size */
MPI_Count io_size; /* Actual number of bytes requested */
-#else
- int bytes_written;
- int type_size; /* MPI datatype used for I/O's size */
- int io_size; /* Actual number of bytes requested */
-#endif
#ifdef H5FDmpio_DEBUG
bool H5FD_mpio_debug_t_flag = (H5FD_mpio_debug_flags_s[(int)'t'] && H5FD_MPIO_TRACE_THIS_RANK(file));
@@ -3559,20 +3469,12 @@ H5FD__mpio_write_selection(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED
H5FD_mpi_native_g, file->info)))
HMPI_GOTO_ERROR(FAIL, "MPI_File_set_view failed", mpi_code);
- /* How many bytes were actually written */
-#if H5_CHECK_MPI_VERSION(3, 0)
+ /* How many bytes were actually written */
if (MPI_SUCCESS != (mpi_code = MPI_Get_elements_x(&mpi_stat, final_mtype, &bytes_written)))
-#else
- if (MPI_SUCCESS != (mpi_code = MPI_Get_elements(&mpi_stat, MPI_BYTE, &bytes_written)))
-#endif
HMPI_GOTO_ERROR(FAIL, "MPI_Get_elements failed", mpi_code);
- /* Get the type's size */
-#if H5_CHECK_MPI_VERSION(3, 0)
+ /* Get the type's size */
if (MPI_SUCCESS != (mpi_code = MPI_Type_size_x(final_mtype, &type_size)))
-#else
- if (MPI_SUCCESS != (mpi_code = MPI_Type_size(final_mtype, &type_size)))
-#endif
HMPI_GOTO_ERROR(FAIL, "MPI_Type_size failed", mpi_code);
/* Compute the actual number of bytes requested */