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authorRichard Warren <Richard.Warren@hdfgroup.org>2019-10-05 14:18:17 (GMT)
committerRichard Warren <Richard.Warren@hdfgroup.org>2019-10-05 14:18:17 (GMT)
commit21a18a1cd2547b83c53395b4a6bb11499199f923 (patch)
tree4d11608bdf58d0600e31eec5bc8a628b99dab28e /src/H5FDmpio.c
parentf2be6da71479c4d20e61af8dfebd2aa0050427d9 (diff)
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Make the initial bug fixes to allow >2GB writes with Independent IO
Diffstat (limited to 'src/H5FDmpio.c')
-rw-r--r--src/H5FDmpio.c38
1 files changed, 28 insertions, 10 deletions
diff --git a/src/H5FDmpio.c b/src/H5FDmpio.c
index 71e9fe1..458d190 100644
--- a/src/H5FDmpio.c
+++ b/src/H5FDmpio.c
@@ -22,16 +22,17 @@
#include "H5FDdrvr_module.h" /* This source code file is part of the H5FD driver module */
-#include "H5private.h" /* Generic Functions */
+#include "H5private.h" /* Generic Functions */
#include "H5CXprivate.h" /* API Contexts */
-#include "H5Dprivate.h" /* Dataset functions */
-#include "H5Eprivate.h" /* Error handling */
-#include "H5Fprivate.h" /* File access */
-#include "H5FDprivate.h" /* File drivers */
-#include "H5FDmpi.h" /* MPI-based file drivers */
-#include "H5Iprivate.h" /* IDs */
-#include "H5MMprivate.h" /* Memory management */
+#include "H5Dprivate.h" /* Dataset functions */
+#include "H5Eprivate.h" /* Error handling */
+#include "H5Fprivate.h" /* File access */
+#include "H5FDprivate.h" /* File drivers */
+#include "H5FDmpi.h" /* MPI-based file drivers */
+#include "H5Iprivate.h" /* IDs */
+#include "H5MMprivate.h" /* Memory management */
#include "H5Pprivate.h" /* Property lists */
+#include "H5Sprivate.h" /* Large MPIO data type creation */
#ifdef H5_HAVE_PARALLEL
@@ -1324,6 +1325,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5FD__mpio_read() */
+
/*-------------------------------------------------------------------------
* Function: H5FD__mpio_write
@@ -1366,6 +1368,7 @@ H5FD__mpio_write(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED dxpl_id,
#endif
int size_i;
hbool_t use_view_this_time = FALSE;
+ hbool_t derived_type = FALSE;
H5FD_mpio_xfer_t xfer_mode; /* I/O transfer mode */
herr_t ret_value = SUCCEED;
@@ -1391,8 +1394,6 @@ H5FD__mpio_write(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED dxpl_id,
if(H5FD_mpi_haddr_to_MPIOff(addr, &mpi_off) < 0)
HGOTO_ERROR(H5E_INTERNAL, H5E_BADRANGE, FAIL, "can't convert from haddr to MPI off")
size_i = (int)size;
- if((hsize_t)size_i != size)
- HGOTO_ERROR(H5E_INTERNAL, H5E_BADRANGE, FAIL, "can't convert from size to size_i")
#ifdef H5FDmpio_DEBUG
if(H5FD_mpio_Debug[(int)'w'])
@@ -1430,6 +1431,20 @@ H5FD__mpio_write(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED dxpl_id,
*/
mpi_off = 0;
} /* end if */
+ else if(size != (hsize_t)size_i) {
+ /* If HERE, then we need to work around the integer size limit
+ * of 2GB. The input size_t size variable cannot fit into an integer,
+ * but we can get around that limitation by creating a different datatype
+ * and then setting the integer size (or element count) to 1 when using
+ * the derived_type.
+ */
+
+ if (H5S_mpio_create_large_type(size, 0, MPI_BYTE, &buf_type) < 0)
+ HGOTO_ERROR(H5E_INTERNAL, H5E_CANTGET, FAIL, "can't create MPI-I/O datatype")
+
+ derived_type = TRUE;
+ size_i = 1;
+ }
/* Write the data. */
if(use_view_this_time) {
@@ -1506,6 +1521,9 @@ H5FD__mpio_write(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED dxpl_id,
file->local_eof = addr + (haddr_t)bytes_written;
done:
+ if(derived_type) {
+ MPI_Type_free(&buf_type);
+ }
#ifdef H5FDmpio_DEBUG
if(H5FD_mpio_Debug[(int)'t'])
HDfprintf(stdout, "%s: Leaving, proc %d: ret_value = %d\n", FUNC, file->mpi_rank, ret_value );