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authorQuincey Koziol <koziol@hdfgroup.org>2009-04-21 22:46:38 (GMT)
committerQuincey Koziol <koziol@hdfgroup.org>2009-04-21 22:46:38 (GMT)
commit5bb857476f99118cda0e54ea522f52933a582747 (patch)
tree741024b69250fe9166091aa8f28bc78c35d3fb64 /src/H5Groot.c
parent35bbc743d4cf77d6aa8af2acf5578db02e5129ca (diff)
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[svn-r16825] Description:
Bring revisions 16636:16821 from trunk to revise_chunks branch Tested on: FreeBSD/32 6.3 (duty) Mac OS X/32 10.5.6 (amazon) (h5committest not needed on this branch)
Diffstat (limited to 'src/H5Groot.c')
-rw-r--r--src/H5Groot.c368
1 files changed, 368 insertions, 0 deletions
diff --git a/src/H5Groot.c b/src/H5Groot.c
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+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the files COPYING and Copyright.html. COPYING can be found at the root *
+ * of the source code distribution tree; Copyright.html can be found at the *
+ * root level of an installed copy of the electronic HDF5 document set and *
+ * is linked from the top-level documents page. It can also be found at *
+ * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
+ * access to either file, you may request a copy from help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+ /*-------------------------------------------------------------------------
+ *
+ * Created: H5Gobj.c
+ * Apr 8 2009
+ * Neil Fortner <nfortne2@hdfgroup.org>
+ *
+ * Purpose: Functions for operating on the root group.
+ *
+ *-------------------------------------------------------------------------
+ */
+
+/****************/
+/* Module Setup */
+/****************/
+
+#define H5F_PACKAGE /*suppress error about including H5Fpkg */
+#define H5G_PACKAGE /*suppress error about including H5Gpkg */
+
+
+/***********/
+/* Headers */
+/***********/
+#include "H5private.h" /* Generic Functions */
+#include "H5Eprivate.h" /* Error handling */
+#include "H5Fpkg.h" /* File access */
+#include "H5Gpkg.h" /* Groups */
+#include "H5Iprivate.h" /* IDs */
+#include "H5MMprivate.h" /* Memory management */
+#include "H5Pprivate.h" /* Property Lists */
+
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5G_rootof
+ *
+ * Purpose: Return a pointer to the root group of the file. If the file
+ * is part of a virtual file then the root group of the virtual
+ * file is returned.
+ *
+ * Return: Success: Ptr to the root group of the file. Do not
+ * free the pointer -- it points directly into
+ * the file struct.
+ *
+ * Failure: NULL
+ *
+ * Programmer: Robb Matzke
+ * Tuesday, October 13, 1998
+ *
+ *-------------------------------------------------------------------------
+ */
+H5G_t *
+H5G_rootof(H5F_t *f)
+{
+ FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5G_rootof)
+
+ while(f->parent)
+ f = f->parent;
+
+ FUNC_LEAVE_NOAPI(f->shared->root_grp)
+} /* end H5G_rootof() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5G_root_ent_decode
+ *
+ * Purpose: Decodes the root group symbol table entry into the file
+ * structure, and updates the root group address in the file
+ * structure.
+ *
+ * Return: Success: Non-negative with *pp pointing to the first byte
+ * following the symbol table entry.
+ *
+ * Failure: Negative
+ *
+ * Programmer: Quincey Koziol
+ * koziol@ncsa.uiuc.edu
+ * Sep 26 2005
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5G_root_ent_decode(H5F_t *f, const uint8_t **pp)
+{
+ const uint8_t *p_ret = *pp + H5G_SIZEOF_ENTRY(f);
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_NOAPI(H5G_root_ent_decode, FAIL)
+
+ /* check arguments */
+ HDassert(f);
+ HDassert(pp);
+
+ /* Allocate space for the root group symbol table entry */
+ HDassert(!f->shared->root_ent);
+ if(NULL == (f->shared->root_ent = (H5G_entry_t *) H5MM_calloc(sizeof(H5G_entry_t))))
+ HGOTO_ERROR(H5E_RESOURCE, H5E_CANTALLOC, FAIL, "can't allocate space for symbol table entry")
+
+ /* decode the root group symbol table entry */
+ if(H5G_ent_decode_vec(f, pp, f->shared->root_ent, 1) < 0)
+ HGOTO_ERROR(H5E_SYM, H5E_CANTDECODE, FAIL, "can't decode symbol table entry")
+
+ /* Set the root group address to the correct value */
+ f->shared->root_addr = f->shared->root_ent->header;
+
+ /* Set decode pointer */
+ *pp = p_ret;
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5G_root_ent_decode() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5G_root_ent_encode
+ *
+ * Purpose: Encodes the root group symbol table entry into the buffer
+ * pointed to by *pp.
+ *
+ * Return: Success: Non-negative, with *pp pointing to the first byte
+ * after the symbol table entry.
+ *
+ * Failure: Negative
+ *
+ * Programmer: Quincey Koziol
+ * koziol@ncsa.uiuc.edu
+ * Sep 26 2005
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5G_root_ent_encode(H5F_t *f, uint8_t **pp)
+{
+ uint8_t *p_ret = *pp + H5G_SIZEOF_ENTRY(f);
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_NOAPI(H5G_root_ent_encode, FAIL)
+
+ /* check arguments */
+ HDassert(f);
+ HDassert(f->shared);
+ HDassert(f->shared->root_ent);
+ HDassert(pp);
+
+ /* Encode entry */
+ if(H5G_ent_encode_vec(f, pp, f->shared->root_ent, 1) < 0)
+ HGOTO_ERROR(H5E_SYM, H5E_CANTENCODE, FAIL, "can't encode symbol table entry")
+
+ /* Set encode pointer */
+ *pp = p_ret;
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5G_root_ent_encode() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5G_mkroot
+ *
+ * Purpose: Creates a root group in an empty file and opens it. If a
+ * root group is already open then this function immediately
+ * returns. If ENT is non-null then it's the symbol table
+ * entry for an existing group which will be opened as the root
+ * group. Otherwise a new root group is created and then
+ * opened.
+ *
+ * Return: Non-negative on success/Negative on failure
+ *
+ * Programmer: Robb Matzke
+ * matzke@llnl.gov
+ * Aug 11 1997
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5G_mkroot(H5F_t *f, hid_t dxpl_id, hbool_t create_root)
+{
+ H5G_loc_t root_loc; /* Root location information */
+ htri_t stab_exists = -1; /* Whether the symbol table exists */
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_NOAPI(H5G_mkroot, FAIL)
+
+ /* check args */
+ HDassert(f);
+
+ /* Check if the root group is already initialized */
+ if(f->shared->root_grp)
+ HGOTO_DONE(SUCCEED)
+
+ /* Create information needed for group nodes */
+ if(H5G_node_init(f) < 0)
+ HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to create group node info")
+
+ /*
+ * Create the group pointer
+ */
+ if(NULL == (f->shared->root_grp = H5FL_CALLOC(H5G_t)))
+ HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
+ if(NULL == (f->shared->root_grp->shared = H5FL_CALLOC(H5G_shared_t))) {
+ (void)H5FL_FREE(H5G_t, f->shared->root_grp);
+ HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
+ } /* end if */
+
+ /* Initialize the root_loc structure to point to fields in the newly created
+ * f->shared->root_grp structure */
+ root_loc.oloc = &(f->shared->root_grp->oloc);
+ root_loc.path = &(f->shared->root_grp->path);
+ H5G_loc_reset(&root_loc);
+
+ /*
+ * If there is no root object then create one. The root group always starts
+ * with a hard link count of one since it's pointed to by the superblock.
+ */
+ if(create_root) {
+ H5P_genplist_t *fc_plist; /* File creation property list */
+ H5O_ginfo_t ginfo; /* Group info parameters */
+ H5O_linfo_t linfo; /* Link info parameters */
+ unsigned super_vers; /* Superblock version */
+
+ /* Get the file creation property list */
+ /* (Which is a sub-class of the group creation property class) */
+ if(NULL == (fc_plist = (H5P_genplist_t *)H5I_object(f->shared->fcpl_id)))
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a property list")
+
+ /* Get the group info property */
+ if(H5P_get(fc_plist, H5G_CRT_GROUP_INFO_NAME, &ginfo) < 0)
+ HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get group info")
+
+ /* Get the link info property */
+ if(H5P_get(fc_plist, H5G_CRT_LINK_INFO_NAME, &linfo) < 0)
+ HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get link info")
+
+ /* Get the superblock version */
+ if(H5P_get(fc_plist, H5F_CRT_SUPER_VERS_NAME, &super_vers) < 0)
+ HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "unable to get superblock version")
+
+ /* Create root group */
+ if(H5G_obj_create(f, dxpl_id, &ginfo, &linfo, f->shared->fcpl_id, root_loc.oloc/*out*/) < 0)
+ HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to create group entry")
+ if(1 != H5O_link(root_loc.oloc, 1, dxpl_id))
+ HGOTO_ERROR(H5E_SYM, H5E_LINKCOUNT, FAIL, "internal error (wrong link count)")
+
+ /* Create the root group symbol table entry */
+ HDassert(!f->shared->root_ent);
+ if(super_vers < HDF5_SUPERBLOCK_VERSION_2) {
+ /* Allocate space for the root group symbol table entry */
+ if(NULL == (f->shared->root_ent = (H5G_entry_t *) H5MM_calloc(sizeof(H5G_entry_t))))
+ HGOTO_ERROR(H5E_RESOURCE, H5E_CANTALLOC, FAIL, "can't allocate space for symbol table entry")
+
+ /* Initialize the root group symbol table entry */
+ f->shared->root_ent->dirty = TRUE;
+ f->shared->root_ent->type = H5G_NOTHING_CACHED; /* We will cache the stab later */
+ f->shared->root_ent->name_off = 0; /* No name (yet) */
+ f->shared->root_ent->header = root_loc.oloc->addr;
+ f->shared->root_ent->file = root_loc.oloc->file;
+ } /* end if */
+ } /* end if */
+ else {
+ /* Create root group object location from f */
+ root_loc.oloc->addr = f->shared->root_addr;
+ root_loc.oloc->file = f;
+
+ /*
+ * Open the root object as a group.
+ */
+ if(H5O_open(root_loc.oloc) < 0)
+ HGOTO_ERROR(H5E_SYM, H5E_CANTOPENOBJ, FAIL, "unable to open root group")
+
+ /* Actions to take if the symbol table information is cached */
+ if(f->shared->root_ent && f->shared->root_ent->type == H5G_CACHED_STAB) {
+ /* Check for the situation where the symbol table is cached but does
+ * not exist. This can happen if, for example, an external link is
+ * added to the root group. */
+ if((stab_exists = H5O_msg_exists(root_loc.oloc, H5O_STAB_ID, dxpl_id)) < 0)
+ HGOTO_ERROR(H5E_SYM, H5E_CANTGET, FAIL, "can't check if symbol table message exists")
+
+ /* Remove the cache if the stab does not exist */
+ if(!stab_exists)
+ f->shared->root_ent->type = H5G_NOTHING_CACHED;
+#ifndef H5_STRICT_FORMAT_CHECKS
+ /* If symbol table information is cached, check if we should replace the
+ * symbol table message with the cached symbol table information */
+ else if(H5F_INTENT(f) & H5F_ACC_RDWR) {
+ H5O_stab_t cached_stab;
+
+ /* Retrieve the cached symbol table information */
+ cached_stab.btree_addr = f->shared->root_ent->cache.stab.btree_addr;
+ cached_stab.heap_addr = f->shared->root_ent->cache.stab.heap_addr;
+
+ /* Check if the symbol table message is valid, and replace with the
+ * cached symbol table if necessary */
+ if(H5G_stab_valid(root_loc.oloc, dxpl_id, &cached_stab) < 0)
+ HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "unable to verify symbol table")
+ } /* end if */
+#endif /* H5_STRICT_FORMAT_CHECKS */
+ } /* end if */
+ } /* end else */
+
+ /* Cache the root group's symbol table information in the root group symbol
+ * table entry. It will have been allocated by now if it needs to be
+ * present, so we don't need to check the superblock version. We do this if
+ * we have write access, the root entry has been allocated (i.e.
+ * super_vers < 2) and the stab info is not already cached. */
+ if((H5F_INTENT(f) & H5F_ACC_RDWR) && stab_exists != FALSE && f->shared->root_ent
+ && f->shared->root_ent->type != H5G_CACHED_STAB) {
+ H5O_stab_t stab; /* Symbol table */
+
+ /* Check if the stab message exists. It's possible for the root group
+ * to use the latest version while the superblock is an old version.
+ * If stab_exists is not -1 then we have already checked. */
+ if(stab_exists == -1 && (stab_exists = H5O_msg_exists(root_loc.oloc, H5O_STAB_ID, dxpl_id)) < 0)
+ HGOTO_ERROR(H5E_SYM, H5E_CANTGET, FAIL, "can't check if symbol table message exists")
+
+ if(stab_exists) {
+ /* Read the root group's symbol table message */
+ if(NULL == H5O_msg_read(root_loc.oloc, H5O_STAB_ID, &stab, dxpl_id))
+ HGOTO_ERROR(H5E_SYM, H5E_BADMESG, FAIL, "unable to read symbol table message")
+
+ /* Update the root group symbol table entry */
+ f->shared->root_ent->type = H5G_CACHED_STAB;
+ f->shared->root_ent->cache.stab.btree_addr = stab.btree_addr;
+ f->shared->root_ent->cache.stab.heap_addr = stab.heap_addr;
+ } /* end if */
+ } /* end if */
+
+ /* Create the path names for the root group's entry */
+ H5G_name_init(root_loc.path, "/");
+
+ f->shared->root_grp->shared->fo_count = 1;
+ /* The only other open object should be the superblock extension, if it
+ * exists. Don't count either the superblock extension or the root group
+ * in the number of open objects in the file.
+ */
+ HDassert((1 == f->nopen_objs) ||
+ (2 == f->nopen_objs && HADDR_UNDEF != f->shared->extension_addr));
+ f->nopen_objs--;
+
+done:
+ /* In case of error, free various memory locations that may have been
+ * allocated */
+ if(ret_value < 0) {
+ if(f->shared->root_grp) {
+ if(f->shared->root_grp->shared)
+ f->shared->root_grp->shared = H5FL_FREE(H5G_shared_t, f->shared->root_grp->shared);
+ f->shared->root_grp = H5FL_FREE(H5G_t, f->shared->root_grp);
+ } /* end if */
+ f->shared->root_ent = (H5G_entry_t *) H5MM_xfree(f->shared->root_ent);
+ H5G_name_free(root_loc.path);
+ } /* end if */
+
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5G_mkroot() */
+