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authorQuincey Koziol <koziol@hdfgroup.org>2008-06-03 19:44:12 (GMT)
committerQuincey Koziol <koziol@hdfgroup.org>2008-06-03 19:44:12 (GMT)
commit771bae88881f4ae8102c9553fd10e0938aa3094c (patch)
tree62ac7bce1e109e1b0b8899ea14da603a2b6e6ffc /src/H5Gstab.c
parentd36f67c0e27a39a54f870c4f917ab2c1754e80d6 (diff)
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[svn-r15131] Description:
Finish omnibus chunked dataset I/O refactoring, to separate general actions on chunked datasets from actions that are specific to using the v1 B-tree index. Cleaned up a few bugs and added some additional tests also. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.5.2 (amazon) in debug mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
Diffstat (limited to 'src/H5Gstab.c')
-rw-r--r--src/H5Gstab.c35
1 files changed, 19 insertions, 16 deletions
diff --git a/src/H5Gstab.c b/src/H5Gstab.c
index 61af068..a5280b5 100644
--- a/src/H5Gstab.c
+++ b/src/H5Gstab.c
@@ -518,7 +518,7 @@ H5G_stab_iterate(const H5O_loc_t *oloc, hid_t dxpl_id, H5_iter_order_t order,
udata.op_data = op_data;
/* Iterate over the group members */
- if((ret_value = H5B_iterate(oloc->file, dxpl_id, H5B_SNODE, H5G_node_iterate, stab.btree_addr, &udata)) < 0)
+ if((ret_value = H5B_iterate(oloc->file, dxpl_id, H5B_SNODE, stab.btree_addr, H5G_node_iterate, &udata)) < 0)
HERROR(H5E_SYM, H5E_CANTNEXT, "iteration operator failed");
/* Check for too high of a starting index (ex post facto :-) */
@@ -535,8 +535,7 @@ H5G_stab_iterate(const H5O_loc_t *oloc, hid_t dxpl_id, H5_iter_order_t order,
udata.ltable = &ltable;
/* Iterate over the group members */
- if(H5B_iterate(oloc->file, dxpl_id, H5B_SNODE, H5G_node_build_table,
- stab.btree_addr, &udata) < 0)
+ if(H5B_iterate(oloc->file, dxpl_id, H5B_SNODE, stab.btree_addr, H5G_node_build_table, &udata) < 0)
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "unable to build link table")
/* Check for skipping out of bounds */
@@ -595,7 +594,7 @@ H5G_stab_count(H5O_loc_t *oloc, hsize_t *num_objs, hid_t dxpl_id)
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "unable to determine local heap address")
/* Iterate over the group members */
- if(H5B_iterate(oloc->file, dxpl_id, H5B_SNODE, H5G_node_sumup, stab.btree_addr, num_objs) < 0)
+ if(H5B_iterate(oloc->file, dxpl_id, H5B_SNODE, stab.btree_addr, H5G_node_sumup, num_objs) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "iteration operator failed")
done:
@@ -616,10 +615,12 @@ done:
*-------------------------------------------------------------------------
*/
herr_t
-H5G_stab_bh_size(H5F_t *f, hid_t dxpl_id, const H5O_stab_t *stab, H5_ih_info_t *bh_info)
+H5G_stab_bh_size(H5F_t *f, hid_t dxpl_id, const H5O_stab_t *stab,
+ H5_ih_info_t *bh_info)
{
- H5B_info_ud_t bh_udata; /* User-data for B-tree callbacks */
- herr_t ret_value = SUCCEED;
+ hsize_t snode_size; /* Symbol table node size */
+ H5B_info_t bt_info; /* B-tree node info */
+ herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(H5G_stab_bh_size, FAIL)
@@ -628,14 +629,16 @@ H5G_stab_bh_size(H5F_t *f, hid_t dxpl_id, const H5O_stab_t *stab, H5_ih_info_t *
HDassert(stab);
HDassert(bh_info);
- /* Set up user data for B-tree callback */
- bh_udata.udata = NULL;
- bh_udata.btree_size = &(bh_info->index_size);
+ /* Set up user data for B-tree iteration */
+ snode_size = 0;
/* Get the B-tree & symbol table node size info */
- if(H5B_iterate_size(f, dxpl_id, H5B_SNODE, H5G_node_iterate_size, stab->btree_addr, &bh_udata) < 0)
+ if(H5B_get_info(f, dxpl_id, H5B_SNODE, stab->btree_addr, &bt_info, H5G_node_iterate_size, &snode_size) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTINIT, FAIL, "iteration operator failed")
+ /* Add symbol table & B-tree node sizes to index info */
+ bh_info->index_size += snode_size + bt_info.size;
+
/* Get the size of the local heap for the group */
if(H5HL_heapsize(f, dxpl_id, stab->heap_addr, &(bh_info->heap_size)) < 0)
HGOTO_ERROR(H5E_HEAP, H5E_CANTINIT, FAIL, "iteration operator failed")
@@ -723,7 +726,7 @@ H5G_stab_get_name_by_idx(H5O_loc_t *oloc, H5_iter_order_t order, hsize_t n,
hsize_t nlinks = 0; /* Number of links in group */
/* Iterate over the symbol table nodes, to count the links */
- if(H5B_iterate(oloc->file, dxpl_id, H5B_SNODE, H5G_node_sumup, stab.btree_addr, &nlinks) < 0)
+ if(H5B_iterate(oloc->file, dxpl_id, H5B_SNODE, stab.btree_addr, H5G_node_sumup, &nlinks) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "iteration operator failed")
/* Map decreasing iteration order index to increasing iteration order index */
@@ -739,7 +742,7 @@ H5G_stab_get_name_by_idx(H5O_loc_t *oloc, H5_iter_order_t order, hsize_t n,
udata.name = NULL;
/* Iterate over the group members */
- if(H5B_iterate(oloc->file, dxpl_id, H5B_SNODE, H5G_node_by_idx, stab.btree_addr, &udata) < 0)
+ if(H5B_iterate(oloc->file, dxpl_id, H5B_SNODE, stab.btree_addr, H5G_node_by_idx, &udata) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "iteration operator failed")
/* If we don't know the name now, we almost certainly went out of bounds */
@@ -947,7 +950,7 @@ H5G_stab_lookup_by_idx(H5O_loc_t *grp_oloc, H5_iter_order_t order, hsize_t n,
hsize_t nlinks = 0; /* Number of links in group */
/* Iterate over the symbol table nodes, to count the links */
- if(H5B_iterate(grp_oloc->file, dxpl_id, H5B_SNODE, H5G_node_sumup, stab.btree_addr, &nlinks) < 0)
+ if(H5B_iterate(grp_oloc->file, dxpl_id, H5B_SNODE, stab.btree_addr, H5G_node_sumup, &nlinks) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "iteration operator failed")
/* Map decreasing iteration order index to increasing iteration order index */
@@ -964,7 +967,7 @@ H5G_stab_lookup_by_idx(H5O_loc_t *grp_oloc, H5_iter_order_t order, hsize_t n,
udata.found = FALSE;
/* Iterate over the group members */
- if(H5B_iterate(grp_oloc->file, dxpl_id, H5B_SNODE, H5G_node_by_idx, stab.btree_addr, &udata) < 0)
+ if(H5B_iterate(grp_oloc->file, dxpl_id, H5B_SNODE, stab.btree_addr, H5G_node_by_idx, &udata) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "iteration operator failed")
/* If we didn't find the link, we almost certainly went out of bounds */
@@ -1076,7 +1079,7 @@ H5G_stab_get_type_by_idx(H5O_loc_t *oloc, hsize_t idx, hid_t dxpl_id)
udata.type = H5G_UNKNOWN;
/* Iterate over the group members */
- if(H5B_iterate(oloc->file, dxpl_id, H5B_SNODE, H5G_node_by_idx, stab.btree_addr, &udata) < 0)
+ if(H5B_iterate(oloc->file, dxpl_id, H5B_SNODE, stab.btree_addr, H5G_node_by_idx, &udata) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5G_UNKNOWN, "iteration operator failed")
/* If we don't know the type now, we almost certainly went out of bounds */