Clang-format of source files

1 files changed, 145 insertions, 154 deletions

diff --git a/src/H5Ocopy_ref.c b/src/H5Ocopy_ref.c
index e03bb69..cb7a339 100644
--- a/src/H5Ocopy_ref.c
+++ b/src/H5Ocopy_ref.c
@@ -23,29 +23,26 @@
 /* Module Setup */
 /****************/
 
-#include "H5Omodule.h"          /* This source code file is part of the H5O module */
-#define H5R_FRIEND              /* Suppress error about including H5Rpkg   */
-
+#include "H5Omodule.h" /* This source code file is part of the H5O module */
+#define H5R_FRIEND     /* Suppress error about including H5Rpkg   */
 
 /***********/
 /* Headers */
 /***********/
-#include "H5private.h"          /* Generic Functions                        */
-#include "H5Fprivate.h"         /* File                                     */
-#include "H5Iprivate.h"         /* IDs                                      */
-#include "H5Lprivate.h"         /* Links                                    */
-#include "H5MMprivate.h"        /* Memory management                        */
-#include "H5Opkg.h"             /* Object headers                           */
-#include "H5Rpkg.h"             /* References                               */
+#include "H5private.h"   /* Generic Functions                        */
+#include "H5Fprivate.h"  /* File                                     */
+#include "H5Iprivate.h"  /* IDs                                      */
+#include "H5Lprivate.h"  /* Links                                    */
+#include "H5MMprivate.h" /* Memory management                        */
+#include "H5Opkg.h"      /* Object headers                           */
+#include "H5Rpkg.h"      /* References                               */
 
 #include "H5VLnative_private.h" /* Native VOL connector                     */
 
-
 /****************/
 /* Local Macros */
 /****************/
 
-
 /******************/
 /* Local Typedefs */
 /******************/
@@ -54,23 +51,22 @@
 /* Package Typedefs */
 /********************/
 
-
 /********************/
 /* Local Prototypes */
 /********************/
 
-static herr_t H5O__copy_obj_by_ref(H5O_loc_t *src_oloc, H5O_loc_t *dst_oloc,
-    H5G_loc_t *dst_root_loc, H5O_copy_t *cpy_info);
-static herr_t H5O__copy_expand_ref_object1(H5O_loc_t *src_oloc,
-    const void *buf_src, H5O_loc_t *dst_oloc, H5G_loc_t *dst_root_loc,
-    void *buf_dst, size_t ref_count, H5O_copy_t *cpy_info);
-static herr_t H5O__copy_expand_ref_region1(H5O_loc_t *src_oloc,
-    const void *buf_src, H5O_loc_t *dst_oloc, H5G_loc_t *dst_root_loc,
-    void *buf_dst, size_t ref_count, H5O_copy_t *cpy_info);
-static herr_t H5O__copy_expand_ref_object2(H5O_loc_t *src_oloc, hid_t tid_src,
-    H5T_t *dt_src, const void *buf_src, size_t nbytes_src, H5O_loc_t *dst_oloc,
-    H5G_loc_t *dst_root_loc, void *buf_dst, size_t ref_count,
-    H5O_copy_t *cpy_info);
+static herr_t H5O__copy_obj_by_ref(H5O_loc_t *src_oloc, H5O_loc_t *dst_oloc, H5G_loc_t *dst_root_loc,
+                                   H5O_copy_t *cpy_info);
+static herr_t H5O__copy_expand_ref_object1(H5O_loc_t *src_oloc, const void *buf_src, H5O_loc_t *dst_oloc,
+                                           H5G_loc_t *dst_root_loc, void *buf_dst, size_t ref_count,
+                                           H5O_copy_t *cpy_info);
+static herr_t H5O__copy_expand_ref_region1(H5O_loc_t *src_oloc, const void *buf_src, H5O_loc_t *dst_oloc,
+                                           H5G_loc_t *dst_root_loc, void *buf_dst, size_t ref_count,
+                                           H5O_copy_t *cpy_info);
+static herr_t H5O__copy_expand_ref_object2(H5O_loc_t *src_oloc, hid_t tid_src, H5T_t *dt_src,
+                                           const void *buf_src, size_t nbytes_src, H5O_loc_t *dst_oloc,
+                                           H5G_loc_t *dst_root_loc, void *buf_dst, size_t ref_count,
+                                           H5O_copy_t *cpy_info);
 
 /*********************/
 /* Package Variables */
@@ -83,12 +79,10 @@ H5FL_BLK_EXTERN(type_conv);
 /* Library Private Variables */
 /*****************************/
 
-
 /*******************/
 /* Local Variables */
 /*******************/
 
-
 /*-------------------------------------------------------------------------
  * Function:    H5O__copy_obj_by_ref
  *
@@ -99,10 +93,9 @@ H5FL_BLK_EXTERN(type_conv);
  *-------------------------------------------------------------------------
  */
 static herr_t
-H5O__copy_obj_by_ref(H5O_loc_t *src_oloc, H5O_loc_t *dst_oloc,
-    H5G_loc_t *dst_root_loc, H5O_copy_t *cpy_info)
+H5O__copy_obj_by_ref(H5O_loc_t *src_oloc, H5O_loc_t *dst_oloc, H5G_loc_t *dst_root_loc, H5O_copy_t *cpy_info)
 {
-    herr_t  ret_value = SUCCEED;
+    herr_t ret_value = SUCCEED;
 
     FUNC_ENTER_STATIC
 
@@ -110,15 +103,15 @@ H5O__copy_obj_by_ref(H5O_loc_t *src_oloc, H5O_loc_t *dst_oloc,
     HDassert(dst_oloc);
 
     /* Perform the copy, or look up existing copy */
-    if((ret_value = H5O_copy_header_map(src_oloc, dst_oloc, cpy_info, FALSE, NULL, NULL)) < 0)
+    if ((ret_value = H5O_copy_header_map(src_oloc, dst_oloc, cpy_info, FALSE, NULL, NULL)) < 0)
         HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to copy object")
 
     /* Check if a new valid object is copied to the destination */
-    if(H5F_addr_defined(dst_oloc->addr) && (ret_value > SUCCEED)) {
-        char    tmp_obj_name[80];
-        H5G_name_t      new_path;
-        H5O_loc_t       new_oloc;
-        H5G_loc_t       new_loc;
+    if (H5F_addr_defined(dst_oloc->addr) && (ret_value > SUCCEED)) {
+        char       tmp_obj_name[80];
+        H5G_name_t new_path;
+        H5O_loc_t  new_oloc;
+        H5G_loc_t  new_loc;
 
         /* Set up group location for new object */
         new_loc.oloc = &new_oloc;
@@ -128,7 +121,8 @@ H5O__copy_obj_by_ref(H5O_loc_t *src_oloc, H5O_loc_t *dst_oloc,
         new_oloc.addr = dst_oloc->addr;
 
         /* Pick a default name for the new object */
-        HDsnprintf(tmp_obj_name, sizeof(tmp_obj_name), "~obj_pointed_by_%llu", (unsigned long long)dst_oloc->addr);
+        HDsnprintf(tmp_obj_name, sizeof(tmp_obj_name), "~obj_pointed_by_%llu",
+                   (unsigned long long)dst_oloc->addr);
 
         /* Create a link to the newly copied object */
         /* Note: since H5O_copy_header_map actually copied the target object, it
@@ -136,7 +130,7 @@ H5O__copy_obj_by_ref(H5O_loc_t *src_oloc, H5O_loc_t *dst_oloc,
          * pass the obj_type and udata fields returned by H5O_copy_header_map.
          * This could be changed in the future to slightly improve performance
          * --NAF */
-        if(H5L_link(dst_root_loc, tmp_obj_name, &new_loc, cpy_info->lcpl_id) < 0)
+        if (H5L_link(dst_root_loc, tmp_obj_name, &new_loc, cpy_info->lcpl_id) < 0)
             HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "unable to insert link")
 
         H5G_loc_free(&new_loc);
@@ -146,7 +140,6 @@ done:
     FUNC_LEAVE_NOAPI(ret_value)
 } /* end H5O__copy_obj_by_ref() */
 
-
 /*-------------------------------------------------------------------------
  * Function:    H5O__copy_expand_ref_object1
  *
@@ -157,57 +150,57 @@ done:
  *-------------------------------------------------------------------------
  */
 static herr_t
-H5O__copy_expand_ref_object1(H5O_loc_t *src_oloc, const void *buf_src,
-    H5O_loc_t *dst_oloc, H5G_loc_t *dst_root_loc, void *buf_dst,
-    size_t ref_count, H5O_copy_t *cpy_info)
+H5O__copy_expand_ref_object1(H5O_loc_t *src_oloc, const void *buf_src, H5O_loc_t *dst_oloc,
+                             H5G_loc_t *dst_root_loc, void *buf_dst, size_t ref_count, H5O_copy_t *cpy_info)
 {
-    const hobj_ref_t *src_ref = (const hobj_ref_t *)buf_src;
-    hobj_ref_t *dst_ref       = (hobj_ref_t *)buf_dst;
-    const unsigned char zeros[H5R_OBJ_REF_BUF_SIZE] = { 0 };
-    size_t buf_size = H5R_OBJ_REF_BUF_SIZE;
-    size_t i; /* Local index variable */
-    size_t token_size = H5F_SIZEOF_ADDR(src_oloc->file);
-    herr_t ret_value = SUCCEED;
+    const hobj_ref_t *  src_ref                     = (const hobj_ref_t *)buf_src;
+    hobj_ref_t *        dst_ref                     = (hobj_ref_t *)buf_dst;
+    const unsigned char zeros[H5R_OBJ_REF_BUF_SIZE] = {0};
+    size_t              buf_size                    = H5R_OBJ_REF_BUF_SIZE;
+    size_t              i; /* Local index variable */
+    size_t              token_size = H5F_SIZEOF_ADDR(src_oloc->file);
+    herr_t              ret_value  = SUCCEED;
 
     FUNC_ENTER_STATIC
 
     /* Making equivalent references in the destination file */
-    for(i = 0; i < ref_count; i++) {
-        const unsigned char *src_buf = (const unsigned char *)&src_ref[i];
-        unsigned char *dst_buf = (unsigned char *)&dst_ref[i];
-        H5O_token_t tmp_token = { 0 };
+    for (i = 0; i < ref_count; i++) {
+        const unsigned char *src_buf   = (const unsigned char *)&src_ref[i];
+        unsigned char *      dst_buf   = (unsigned char *)&dst_ref[i];
+        H5O_token_t          tmp_token = {0};
 
         /* If data is not initialized, copy zeros and skip */
-        if(0 == HDmemcmp(src_buf, zeros, buf_size))
+        if (0 == HDmemcmp(src_buf, zeros, buf_size))
             HDmemset(dst_buf, 0, buf_size);
         else {
             /* Set up for the object copy for the reference */
-            if(H5R__decode_token_obj_compat(src_buf, &buf_size, &tmp_token, token_size) < 0)
+            if (H5R__decode_token_obj_compat(src_buf, &buf_size, &tmp_token, token_size) < 0)
                 HGOTO_ERROR(H5E_OHDR, H5E_CANTDECODE, FAIL, "unable to decode src object address")
-            if(H5VL_native_token_to_addr(src_oloc->file, H5I_FILE, tmp_token, &src_oloc->addr) < 0)
-                HGOTO_ERROR(H5E_OHDR, H5E_CANTUNSERIALIZE, FAIL, "can't deserialize object token into address")
+            if (H5VL_native_token_to_addr(src_oloc->file, H5I_FILE, tmp_token, &src_oloc->addr) < 0)
+                HGOTO_ERROR(H5E_OHDR, H5E_CANTUNSERIALIZE, FAIL,
+                            "can't deserialize object token into address")
 
-            if(!H5F_addr_defined(src_oloc->addr) || src_oloc->addr == 0)
+            if (!H5F_addr_defined(src_oloc->addr) || src_oloc->addr == 0)
                 HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "undefined reference pointer")
             dst_oloc->addr = HADDR_UNDEF;
 
             /* Attempt to copy object from source to destination file */
-            if(H5O__copy_obj_by_ref(src_oloc, dst_oloc, dst_root_loc, cpy_info) < 0)
+            if (H5O__copy_obj_by_ref(src_oloc, dst_oloc, dst_root_loc, cpy_info) < 0)
                 HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to copy object")
 
             /* Set the object reference info for the destination file */
-            if(H5VL_native_addr_to_token(dst_oloc->file, H5I_FILE, dst_oloc->addr, &tmp_token) < 0)
+            if (H5VL_native_addr_to_token(dst_oloc->file, H5I_FILE, dst_oloc->addr, &tmp_token) < 0)
                 HGOTO_ERROR(H5E_OHDR, H5E_CANTSERIALIZE, FAIL, "can't serialize address into object token")
-            if(H5R__encode_token_obj_compat((const H5O_token_t *)&tmp_token, token_size, dst_buf, &buf_size) < 0)
+            if (H5R__encode_token_obj_compat((const H5O_token_t *)&tmp_token, token_size, dst_buf,
+                                             &buf_size) < 0)
                 HGOTO_ERROR(H5E_OHDR, H5E_CANTDECODE, FAIL, "unable to encode dst object address")
         } /* end else */
-    } /* end for */
+    }     /* end for */
 
 done:
     FUNC_LEAVE_NOAPI(ret_value)
 } /* end H5O__copy_expand_ref_object1() */
 
-
 /*-------------------------------------------------------------------------
  * Function:    H5O__copy_expand_ref_region1
  *
@@ -218,47 +211,46 @@ done:
  *-------------------------------------------------------------------------
  */
 static herr_t
-H5O__copy_expand_ref_region1(H5O_loc_t *src_oloc, const void *buf_src,
-    H5O_loc_t *dst_oloc, H5G_loc_t *dst_root_loc, void *buf_dst,
-    size_t ref_count, H5O_copy_t *cpy_info)
+H5O__copy_expand_ref_region1(H5O_loc_t *src_oloc, const void *buf_src, H5O_loc_t *dst_oloc,
+                             H5G_loc_t *dst_root_loc, void *buf_dst, size_t ref_count, H5O_copy_t *cpy_info)
 {
-    const hdset_reg_ref_t *src_ref = (const hdset_reg_ref_t *)buf_src;
-    hdset_reg_ref_t *dst_ref       = (hdset_reg_ref_t *)buf_dst;
-    const unsigned char zeros[H5R_DSET_REG_REF_BUF_SIZE] = { 0 };
-    size_t buf_size = H5R_DSET_REG_REF_BUF_SIZE;
-    size_t i; /* Local index variable */
-    herr_t  ret_value = SUCCEED;
+    const hdset_reg_ref_t *src_ref                          = (const hdset_reg_ref_t *)buf_src;
+    hdset_reg_ref_t *      dst_ref                          = (hdset_reg_ref_t *)buf_dst;
+    const unsigned char    zeros[H5R_DSET_REG_REF_BUF_SIZE] = {0};
+    size_t                 buf_size                         = H5R_DSET_REG_REF_BUF_SIZE;
+    size_t                 i; /* Local index variable */
+    herr_t                 ret_value = SUCCEED;
 
     FUNC_ENTER_STATIC
 
     /* Making equivalent references in the destination file */
-    for(i = 0; i < ref_count; i++) {
+    for (i = 0; i < ref_count; i++) {
         const unsigned char *src_buf = (const unsigned char *)&src_ref[i];
-        unsigned char *dst_buf = (unsigned char *)&dst_ref[i];
-        unsigned char *data = NULL;
-        size_t data_size;
-        const uint8_t *p;
-        uint8_t *q;
+        unsigned char *      dst_buf = (unsigned char *)&dst_ref[i];
+        unsigned char *      data    = NULL;
+        size_t               data_size;
+        const uint8_t *      p;
+        uint8_t *            q;
 
         /* If data is not initialized, copy zeros and skip */
-        if(0 == HDmemcmp(src_buf, zeros, buf_size))
+        if (0 == HDmemcmp(src_buf, zeros, buf_size))
             HDmemset(dst_buf, 0, buf_size);
         else {
             /* Read from heap */
-            if(H5R__decode_heap(src_oloc->file, src_buf, &buf_size, &data, &data_size) < 0)
+            if (H5R__decode_heap(src_oloc->file, src_buf, &buf_size, &data, &data_size) < 0)
                 HGOTO_ERROR(H5E_OHDR, H5E_CANTDECODE, FAIL, "unable to decode dataset region information")
 
             /* Get object address */
             p = (const uint8_t *)data;
             H5F_addr_decode(src_oloc->file, &p, &src_oloc->addr);
-            if(!H5F_addr_defined(src_oloc->addr) || src_oloc->addr == 0) {
+            if (!H5F_addr_defined(src_oloc->addr) || src_oloc->addr == 0) {
                 H5MM_free(data);
                 HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "undefined reference pointer")
             }
             dst_oloc->addr = HADDR_UNDEF;
 
             /* Attempt to copy object from source to destination file */
-            if(H5O__copy_obj_by_ref(src_oloc, dst_oloc, dst_root_loc, cpy_info) < 0) {
+            if (H5O__copy_obj_by_ref(src_oloc, dst_oloc, dst_root_loc, cpy_info) < 0) {
                 H5MM_free(data);
                 HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to copy object")
             } /* end if */
@@ -268,7 +260,7 @@ H5O__copy_expand_ref_region1(H5O_loc_t *src_oloc, const void *buf_src,
             H5F_addr_encode(dst_oloc->file, &q, dst_oloc->addr);
 
             /* Write to heap */
-            if(H5R__encode_heap(dst_oloc->file, dst_buf, &buf_size, data, (size_t)data_size) < 0) {
+            if (H5R__encode_heap(dst_oloc->file, dst_buf, &buf_size, data, (size_t)data_size) < 0) {
                 H5MM_free(data);
                 HGOTO_ERROR(H5E_OHDR, H5E_CANTENCODE, FAIL, "unable to encode dataset region information")
             }
@@ -276,13 +268,12 @@ H5O__copy_expand_ref_region1(H5O_loc_t *src_oloc, const void *buf_src,
             /* Free the buffer allocated in H5R__decode_heap() */
             H5MM_free(data);
         } /* end else */
-    } /* end for */
+    }     /* end for */
 
 done:
     FUNC_LEAVE_NOAPI(ret_value)
 } /* end H5O__copy_expand_ref_region1() */
 
-
 /*-------------------------------------------------------------------------
  * Function:    H5O__copy_expand_ref_object2
  *
@@ -293,137 +284,135 @@ done:
  *-------------------------------------------------------------------------
  */
 static herr_t
-H5O__copy_expand_ref_object2(H5O_loc_t *src_oloc, hid_t tid_src, H5T_t *dt_src,
-    const void *buf_src, size_t nbytes_src, H5O_loc_t *dst_oloc,
-    H5G_loc_t *dst_root_loc, void *buf_dst, size_t ref_count,
-    H5O_copy_t *cpy_info)
+H5O__copy_expand_ref_object2(H5O_loc_t *src_oloc, hid_t tid_src, H5T_t *dt_src, const void *buf_src,
+                             size_t nbytes_src, H5O_loc_t *dst_oloc, H5G_loc_t *dst_root_loc, void *buf_dst,
+                             size_t ref_count, H5O_copy_t *cpy_info)
 {
-    H5T_t       *dt_mem = NULL;             /* Memory datatype */
-    H5T_t       *dt_dst = NULL;             /* Destination datatype */
-    hid_t       tid_mem = H5I_INVALID_HID;  /* Datatype ID for memory datatype */
-    hid_t       tid_dst = H5I_INVALID_HID;  /* Datatype ID for memory datatype */
-    H5T_path_t  *tpath_src_mem = NULL,
-                *tpath_mem_dst = NULL;      /* Datatype conversion paths */
-    size_t i;                               /* Local index variable */
-    hbool_t reg_tid_src = (tid_src == H5I_INVALID_HID);
-    hid_t dst_loc_id = H5I_INVALID_HID;
-    void *conv_buf = NULL;                  /* Buffer for converting data */
-    size_t conv_buf_size = 0;               /* Buffer size */
-    void *reclaim_buf = NULL;               /* Buffer for reclaiming data */
-    H5S_t *buf_space = NULL;                /* Dataspace describing buffer */
-    hsize_t buf_dim[1] = {ref_count};       /* Dimension for buffer */
-    size_t token_size = H5F_SIZEOF_ADDR(src_oloc->file);
-    herr_t  ret_value = SUCCEED;
+    H5T_t *     dt_mem        = NULL;                        /* Memory datatype */
+    H5T_t *     dt_dst        = NULL;                        /* Destination datatype */
+    hid_t       tid_mem       = H5I_INVALID_HID;             /* Datatype ID for memory datatype */
+    hid_t       tid_dst       = H5I_INVALID_HID;             /* Datatype ID for memory datatype */
+    H5T_path_t *tpath_src_mem = NULL, *tpath_mem_dst = NULL; /* Datatype conversion paths */
+    size_t      i;                                           /* Local index variable */
+    hbool_t     reg_tid_src   = (tid_src == H5I_INVALID_HID);
+    hid_t       dst_loc_id    = H5I_INVALID_HID;
+    void *      conv_buf      = NULL;        /* Buffer for converting data */
+    size_t      conv_buf_size = 0;           /* Buffer size */
+    void *      reclaim_buf   = NULL;        /* Buffer for reclaiming data */
+    H5S_t *     buf_space     = NULL;        /* Dataspace describing buffer */
+    hsize_t     buf_dim[1]    = {ref_count}; /* Dimension for buffer */
+    size_t      token_size    = H5F_SIZEOF_ADDR(src_oloc->file);
+    herr_t      ret_value     = SUCCEED;
 
     FUNC_ENTER_STATIC
 
     /* Create datatype ID for src datatype. */
-    if((tid_src == H5I_INVALID_HID) && (tid_src = H5I_register(H5I_DATATYPE, dt_src, FALSE)) < 0)
+    if ((tid_src == H5I_INVALID_HID) && (tid_src = H5I_register(H5I_DATATYPE, dt_src, FALSE)) < 0)
         HGOTO_ERROR(H5E_OHDR, H5E_CANTREGISTER, FAIL, "unable to register source file datatype")
 
     /* create a memory copy of the reference datatype */
-    if(NULL == (dt_mem = H5T_copy(dt_src, H5T_COPY_TRANSIENT)))
+    if (NULL == (dt_mem = H5T_copy(dt_src, H5T_COPY_TRANSIENT)))
         HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to copy")
-    if((tid_mem = H5I_register(H5I_DATATYPE, dt_mem, FALSE)) < 0) {
+    if ((tid_mem = H5I_register(H5I_DATATYPE, dt_mem, FALSE)) < 0) {
         (void)H5T_close_real(dt_mem);
         HGOTO_ERROR(H5E_OHDR, H5E_CANTREGISTER, FAIL, "unable to register memory datatype")
     } /* end if */
 
     /* create reference datatype at the destinaton file */
-    if(NULL == (dt_dst = H5T_copy(dt_src, H5T_COPY_TRANSIENT)))
+    if (NULL == (dt_dst = H5T_copy(dt_src, H5T_COPY_TRANSIENT)))
         HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to copy")
-    if(H5T_set_loc(dt_dst, H5F_VOL_OBJ(dst_oloc->file), H5T_LOC_DISK) < 0) {
+    if (H5T_set_loc(dt_dst, H5F_VOL_OBJ(dst_oloc->file), H5T_LOC_DISK) < 0) {
         (void)H5T_close_real(dt_dst);
         HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "cannot mark datatype on disk")
     } /* end if */
-    if((tid_dst = H5I_register(H5I_DATATYPE, dt_dst, FALSE)) < 0) {
+    if ((tid_dst = H5I_register(H5I_DATATYPE, dt_dst, FALSE)) < 0) {
         (void)H5T_close_real(dt_dst);
         HGOTO_ERROR(H5E_OHDR, H5E_CANTREGISTER, FAIL, "unable to register destination file datatype")
     } /* end if */
 
     /* Set up the conversion functions */
-    if(NULL == (tpath_src_mem = H5T_path_find(dt_src, dt_mem)))
+    if (NULL == (tpath_src_mem = H5T_path_find(dt_src, dt_mem)))
         HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to convert between src and mem datatypes")
-    if(NULL == (tpath_mem_dst = H5T_path_find(dt_mem, dt_dst)))
+    if (NULL == (tpath_mem_dst = H5T_path_find(dt_mem, dt_dst)))
         HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to convert between mem and dst datatypes")
 
-    /* Use extra conversion buffer (TODO we should avoid using an extra buffer once the H5Ocopy code has been reworked) */
+    /* Use extra conversion buffer (TODO we should avoid using an extra buffer once the H5Ocopy code has been
+     * reworked) */
     conv_buf_size = MAX(H5T_get_size(dt_src), H5T_get_size(dt_mem)) * ref_count;
-    if(NULL == (conv_buf = H5FL_BLK_MALLOC(type_conv, conv_buf_size)))
+    if (NULL == (conv_buf = H5FL_BLK_MALLOC(type_conv, conv_buf_size)))
         HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for copy buffer")
     H5MM_memcpy(conv_buf, buf_src, nbytes_src);
 
     /* Convert from source file to memory */
-    if(H5T_convert(tpath_src_mem, tid_src, tid_mem, ref_count, (size_t)0, (size_t)0, conv_buf, NULL) < 0)
+    if (H5T_convert(tpath_src_mem, tid_src, tid_mem, ref_count, (size_t)0, (size_t)0, conv_buf, NULL) < 0)
         HGOTO_ERROR(H5E_OHDR, H5E_CANTCONVERT, FAIL, "datatype conversion failed")
 
     /* Retrieve loc ID */
-    if((dst_loc_id = H5F_get_id(dst_oloc->file)) < 0)
+    if ((dst_loc_id = H5F_get_id(dst_oloc->file)) < 0)
         HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file or file object")
 
     /* Making equivalent references in the destination file */
-    for(i = 0; i < ref_count; i++) {
-        H5R_ref_t *ref_ptr  = (H5R_ref_t *)conv_buf;
-        H5R_ref_priv_t *ref = (H5R_ref_priv_t *)&ref_ptr[i];
-        H5O_token_t tmp_token = { 0 };
+    for (i = 0; i < ref_count; i++) {
+        H5R_ref_t *     ref_ptr   = (H5R_ref_t *)conv_buf;
+        H5R_ref_priv_t *ref       = (H5R_ref_priv_t *)&ref_ptr[i];
+        H5O_token_t     tmp_token = {0};
 
         /* Get src object address */
-        if(H5R__get_obj_token(ref, &tmp_token, &token_size) < 0)
+        if (H5R__get_obj_token(ref, &tmp_token, &token_size) < 0)
             HGOTO_ERROR(H5E_OHDR, H5E_CANTGET, FAIL, "unable to get object token")
-        if(H5VL_native_token_to_addr(src_oloc->file, H5I_FILE, tmp_token, &src_oloc->addr) < 0)
+        if (H5VL_native_token_to_addr(src_oloc->file, H5I_FILE, tmp_token, &src_oloc->addr) < 0)
             HGOTO_ERROR(H5E_OHDR, H5E_CANTUNSERIALIZE, FAIL, "can't deserialize object token into address")
 
         /* Attempt to copy object from source to destination file */
-        if(H5O__copy_obj_by_ref(src_oloc, dst_oloc, dst_root_loc, cpy_info) < 0)
+        if (H5O__copy_obj_by_ref(src_oloc, dst_oloc, dst_root_loc, cpy_info) < 0)
             HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to copy object")
 
         /* Set dst object address */
-        if(H5VL_native_addr_to_token(dst_oloc->file, H5I_FILE, dst_oloc->addr, &tmp_token) < 0)
+        if (H5VL_native_addr_to_token(dst_oloc->file, H5I_FILE, dst_oloc->addr, &tmp_token) < 0)
             HGOTO_ERROR(H5E_OHDR, H5E_CANTSERIALIZE, FAIL, "can't serialize address into object token")
-        if(H5R__set_obj_token(ref, (const H5O_token_t *)&tmp_token, token_size) < 0)
+        if (H5R__set_obj_token(ref, (const H5O_token_t *)&tmp_token, token_size) < 0)
             HGOTO_ERROR(H5E_OHDR, H5E_CANTSET, FAIL, "unable to set object token")
         /* Do not set app_ref since references are released once the copy is done */
-        if(H5R__set_loc_id(ref, dst_loc_id, TRUE, FALSE) < 0)
+        if (H5R__set_loc_id(ref, dst_loc_id, TRUE, FALSE) < 0)
             HGOTO_ERROR(H5E_OHDR, H5E_CANTSET, FAIL, "unable to set destination loc id")
     } /* end for */
 
     /* Copy into another buffer, to reclaim memory later */
-    if(NULL == (reclaim_buf = H5FL_BLK_MALLOC(type_conv, conv_buf_size)))
+    if (NULL == (reclaim_buf = H5FL_BLK_MALLOC(type_conv, conv_buf_size)))
         HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for copy buffer")
     H5MM_memcpy(reclaim_buf, conv_buf, conv_buf_size);
-    if(NULL == (buf_space = H5S_create_simple((unsigned)1, buf_dim, NULL)))
+    if (NULL == (buf_space = H5S_create_simple((unsigned)1, buf_dim, NULL)))
         HGOTO_ERROR(H5E_OHDR, H5E_CANTCREATE, FAIL, "can't create simple dataspace")
 
     /* Convert from memory to destination file */
-    if(H5T_convert(tpath_mem_dst, tid_mem, tid_dst, ref_count, (size_t)0, (size_t)0, conv_buf, NULL) < 0)
+    if (H5T_convert(tpath_mem_dst, tid_mem, tid_dst, ref_count, (size_t)0, (size_t)0, conv_buf, NULL) < 0)
         HGOTO_ERROR(H5E_OHDR, H5E_CANTCONVERT, FAIL, "datatype conversion failed")
     H5MM_memcpy(buf_dst, conv_buf, nbytes_src);
 
     /* Reclaim space from reference data */
-    if(H5T_reclaim(tid_mem, buf_space, reclaim_buf) < 0)
+    if (H5T_reclaim(tid_mem, buf_space, reclaim_buf) < 0)
         HGOTO_ERROR(H5E_OHDR, H5E_BADITER, FAIL, "unable to reclaim reference data")
 
 done:
-    if(buf_space && (H5S_close(buf_space) < 0))
+    if (buf_space && (H5S_close(buf_space) < 0))
         HDONE_ERROR(H5E_OHDR, H5E_CANTFREE, FAIL, "Can't close dataspace")
     /* Don't decrement ID, we want to keep underlying datatype */
-    if(reg_tid_src && (tid_src > 0) && (NULL == H5I_remove(tid_src)))
+    if (reg_tid_src && (tid_src > 0) && (NULL == H5I_remove(tid_src)))
         HDONE_ERROR(H5E_OHDR, H5E_CANTFREE, FAIL, "Can't decrement temporary datatype ID")
-    if((tid_mem > 0) && H5I_dec_ref(tid_mem) < 0)
+    if ((tid_mem > 0) && H5I_dec_ref(tid_mem) < 0)
         HDONE_ERROR(H5E_OHDR, H5E_CANTFREE, FAIL, "Can't decrement temporary datatype ID")
-    if((tid_dst > 0) && H5I_dec_ref(tid_dst) < 0)
+    if ((tid_dst > 0) && H5I_dec_ref(tid_dst) < 0)
         HDONE_ERROR(H5E_OHDR, H5E_CANTFREE, FAIL, "Can't decrement temporary datatype ID")
-    if(reclaim_buf)
+    if (reclaim_buf)
         reclaim_buf = H5FL_BLK_FREE(type_conv, reclaim_buf);
-    if(conv_buf)
+    if (conv_buf)
         conv_buf = H5FL_BLK_FREE(type_conv, conv_buf);
-    if((dst_loc_id != H5I_INVALID_HID) && (H5I_dec_ref(dst_loc_id) < 0))
+    if ((dst_loc_id != H5I_INVALID_HID) && (H5I_dec_ref(dst_loc_id) < 0))
         HDONE_ERROR(H5E_OHDR, H5E_CANTDEC, FAIL, "unable to decrement refcount on location id")
 
     FUNC_LEAVE_NOAPI(ret_value)
 } /* end H5O__copy_expand_ref_object2() */
 
-
 /*-------------------------------------------------------------------------
  * Function:	H5O_copy_expand_ref
  *
@@ -434,15 +423,14 @@ done:
  *-------------------------------------------------------------------------
  */
 herr_t
-H5O_copy_expand_ref(H5F_t *file_src, hid_t tid_src, H5T_t *dt_src,
-    void *buf_src, size_t nbytes_src, H5F_t *file_dst, void *buf_dst,
-    H5O_copy_t *cpy_info)
+H5O_copy_expand_ref(H5F_t *file_src, hid_t tid_src, H5T_t *dt_src, void *buf_src, size_t nbytes_src,
+                    H5F_t *file_dst, void *buf_dst, H5O_copy_t *cpy_info)
 {
-    H5O_loc_t dst_oloc;           /* Copied object object location */
-    H5O_loc_t src_oloc;           /* Temporary object location for source object */
-    H5G_loc_t dst_root_loc;       /* The location of root group of the destination file */
-    size_t ref_count;
-    herr_t ret_value = SUCCEED;
+    H5O_loc_t dst_oloc;     /* Copied object object location */
+    H5O_loc_t src_oloc;     /* Temporary object location for source object */
+    H5G_loc_t dst_root_loc; /* The location of root group of the destination file */
+    size_t    ref_count;
+    herr_t    ret_value = SUCCEED;
 
     FUNC_ENTER_NOAPI(FAIL)
 
@@ -461,35 +449,38 @@ H5O_copy_expand_ref(H5F_t *file_src, hid_t tid_src, H5T_t *dt_src,
     dst_oloc.file = file_dst;
 
     /* Set up the root group in the destination file */
-    if(NULL == (dst_root_loc.oloc = H5G_oloc(H5G_rootof(file_dst))))
+    if (NULL == (dst_root_loc.oloc = H5G_oloc(H5G_rootof(file_dst))))
         HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "unable to get object location for root group")
-    if(NULL == (dst_root_loc.path = H5G_nameof(H5G_rootof(file_dst))))
+    if (NULL == (dst_root_loc.path = H5G_nameof(H5G_rootof(file_dst))))
         HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "unable to get path for root group")
 
     /* Determine # of reference elements to copy */
     ref_count = nbytes_src / H5T_get_size(dt_src);
 
     /* Copy object references */
-    switch(H5T_get_ref_type(dt_src)) {
+    switch (H5T_get_ref_type(dt_src)) {
         case H5R_OBJECT1:
-            if(H5O__copy_expand_ref_object1(&src_oloc, buf_src, &dst_oloc, &dst_root_loc, buf_dst, ref_count, cpy_info) < 0)
+            if (H5O__copy_expand_ref_object1(&src_oloc, buf_src, &dst_oloc, &dst_root_loc, buf_dst, ref_count,
+                                             cpy_info) < 0)
                 HGOTO_ERROR(H5E_OHDR, H5E_BADVALUE, FAIL, "unable to expand H5R_OBJECT1 reference")
             break;
         case H5R_DATASET_REGION1:
-            if(H5O__copy_expand_ref_region1(&src_oloc, buf_src, &dst_oloc, &dst_root_loc, buf_dst, ref_count, cpy_info) < 0)
+            if (H5O__copy_expand_ref_region1(&src_oloc, buf_src, &dst_oloc, &dst_root_loc, buf_dst, ref_count,
+                                             cpy_info) < 0)
                 HGOTO_ERROR(H5E_OHDR, H5E_BADVALUE, FAIL, "unable to expand H5R_DATASET_REGION1 reference")
             break;
         case H5R_DATASET_REGION2:
         case H5R_ATTR:
         case H5R_OBJECT2:
-            if(H5O__copy_expand_ref_object2(&src_oloc, tid_src, dt_src, buf_src, nbytes_src, &dst_oloc, &dst_root_loc, buf_dst, ref_count, cpy_info) < 0)
+            if (H5O__copy_expand_ref_object2(&src_oloc, tid_src, dt_src, buf_src, nbytes_src, &dst_oloc,
+                                             &dst_root_loc, buf_dst, ref_count, cpy_info) < 0)
                 HGOTO_ERROR(H5E_OHDR, H5E_BADVALUE, FAIL, "unable to expand reference")
             break;
         case H5R_BADTYPE:
         case H5R_MAXTYPE:
         default:
             HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid reference type")
-        break;
+            break;
     } /* end switch */
 
 done: