[svn-r1204] Changes since 19990415

----------------------

./config/depend.in
	Fixed automatic dependencies. We were storing dependencies for
	*.o files instead of *.lo files after shared libraries were
	added.

./config/gnu-flags
./config/linux-gnulibc1
	Moved `-march=pentiumpro -mcpu=pentiumpro -malign-double' from
	the linux file to this file and caused it to depend on the CPU
	name.  This fixes one of Elena's bugs.

./src/H5B.c
./src/H5Bprivate.h
./src/H5D.c
./src/H5Dprivate.h
./src/H5Dpublic.h
./src/H5F.c
./src/H5Farray.c
./src/H5Fistore.c
./src/H5Fmpio.c
./src/H5Fprivate.h
./src/H5Fpublic.h
./src/H5Gnode.c
./src/H5P.c
./src/H5RA.c
./src/H5Sall.c
./src/H5Shyper.c
./src/H5Smpio.c
./src/H5Spoint.c
./src/H5Sprivate.h
./src/H5Tpublic.h
./test/istore.c
	Added an H5Dget_storage_size() function that reports the
	amount of storage allocated for raw data in a dataset.

	Changed H5D_xfer_* to H5F_xfer_* because these properties are
	more general than datasets. This also allows some of the
	lower-level I/O functions to get this information easier.

./src/H5S.c
./src/H5Sall.c
	Added two new functions H5S_all_read() and H5S_all_write()
	which are optimizations that copy data directly between file
	and memory without having to go through the scatter gather
	step.  This knocks quite a bit of time off the I/O and
	reading/writing entire datasets is a fairly common operation.

./tools/h5ls.c
	Reports the logical size of data, the allocated size of data,
	and the percent utilization.

./MANIFEST
	Removed old pablo files, added new files. Snapshots should now
	start to work again.

./src/H5D.c
./src/H5Fmpio.c
	Removed two warnings signed vs. unsigned comparisons and check
	for overflow.

1 files changed, 7 insertions, 7 deletions

diff --git a/src/H5RA.c b/src/H5RA.c
index bf0f5ef..389e8dc 100644
--- a/src/H5RA.c
+++ b/src/H5RA.c
@@ -738,7 +738,7 @@ H5RA_write(H5RA_t *ra, hssize_t start_row, hsize_t nrows, H5T_t *type,
 		    "memory allocation failed for meta data");
     }
     if (H5D_read(ra->meta, H5RA_meta_type_g, mm_space, mf_space,
-		 &H5D_xfer_dflt, meta)<0) {
+		 &H5F_xfer_dflt, meta)<0) {
 	HGOTO_ERROR(H5E_RAGGED, H5E_READERROR, FAIL,
 		    "unable to read meta data");
     }
@@ -779,7 +779,7 @@ H5RA_write(H5RA_t *ra, hssize_t start_row, hsize_t nrows, H5T_t *type,
 	HGOTO_ERROR(H5E_RAGGED, H5E_CANTINIT, FAIL,
 		    "unable to set meta data selection");
     }
-    if (H5D_write(ra->raw, type, rm_space, rf_space, &H5D_xfer_dflt,
+    if (H5D_write(ra->raw, type, rm_space, rf_space, &H5F_xfer_dflt,
 		  raw_buf)<0) {
 	HGOTO_ERROR(H5E_RAGGED, H5E_WRITEERROR, FAIL,
 		    "unable to write raw data");
@@ -809,7 +809,7 @@ H5RA_write(H5RA_t *ra, hssize_t start_row, hsize_t nrows, H5T_t *type,
 		    "unable to set meta data selection");
     }
     if (H5D_write(ra->meta, H5RA_meta_type_g, mm_space, mf_space,
-		  &H5D_xfer_dflt, meta)<0) {
+		  &H5F_xfer_dflt, meta)<0) {
 	HGOTO_ERROR(H5E_RAGGED, H5E_WRITEERROR, FAIL,
 		    "unable to write meta data");
     }
@@ -926,7 +926,7 @@ H5RA_fix_overflow(H5RA_t *ra, H5T_t *type, H5RA_meta_t *meta, hsize_t nelmts,
 	    HGOTO_ERROR(H5E_RAGGED, H5E_CANTINIT, FAIL,
 			"unable to set overflow selection");
 	}
-	if (H5D_write(ra->over, type, om_space, of_space, &H5D_xfer_dflt,
+	if (H5D_write(ra->over, type, om_space, of_space, &H5F_xfer_dflt,
 		      buf)<0) {
 	    HGOTO_ERROR(H5E_RAGGED, H5E_WRITEERROR, FAIL,
 			"unable to write to overflow dataset");
@@ -1103,7 +1103,7 @@ H5RA_read(H5RA_t *ra, hssize_t start_row, hsize_t nrows, H5T_t *type,
 	HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL,
 		    "memory allocation failed for raw dataset");
     }
-    if (H5D_read(ra->raw, type, rm_space, rf_space, &H5D_xfer_dflt,
+    if (H5D_read(ra->raw, type, rm_space, rf_space, &H5F_xfer_dflt,
 		 raw_buf)<0) {
 	HGOTO_ERROR(H5E_RAGGED, H5E_READERROR, FAIL,
 		    "unable to read raw dataset");
@@ -1134,7 +1134,7 @@ H5RA_read(H5RA_t *ra, hssize_t start_row, hsize_t nrows, H5T_t *type,
 		    "unable to set meta data selection");
     }
     if (H5D_read(ra->meta, H5RA_meta_type_g, mm_space, mf_space,
-		 &H5D_xfer_dflt, meta)<0) {
+		 &H5F_xfer_dflt, meta)<0) {
 	HGOTO_ERROR(H5E_RAGGED, H5E_READERROR, FAIL,
 		    "unable to read meta data");
     }
@@ -1182,7 +1182,7 @@ H5RA_read(H5RA_t *ra, hssize_t start_row, hsize_t nrows, H5T_t *type,
 		HGOTO_ERROR(H5E_RAGGED, H5E_CANTINIT, FAIL,
 			    "unable to set overflow selection");
 	    }
-	    if (H5D_read(ra->over, type, om_space, of_space, &H5D_xfer_dflt,
+	    if (H5D_read(ra->over, type, om_space, of_space, &H5F_xfer_dflt,
 			 buf_out[i])<0) {
 		HGOTO_ERROR(H5E_RAGGED, H5E_CANTINIT, FAIL,
 			    "unable to read overflow dataset");