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author | Allen Byrne <50328838+byrnHDF@users.noreply.github.com> | 2021-05-04 22:46:10 (GMT) |
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committer | GitHub <noreply@github.com> | 2021-05-04 22:46:10 (GMT) |
commit | 021d7c7278fd9c182802f2d5419438716beb37bc (patch) | |
tree | 772b610158e3c771e575a5d7095ebfa589480240 /src/H5Rpublic.h | |
parent | 0801e83615713d95174ed936462310cea32328c7 (diff) | |
download | hdf5-021d7c7278fd9c182802f2d5419438716beb37bc.zip hdf5-021d7c7278fd9c182802f2d5419438716beb37bc.tar.gz hdf5-021d7c7278fd9c182802f2d5419438716beb37bc.tar.bz2 |
Hdf5 1 12 doxygen merge (#615)
* OESS-98 fix tools test for plugins
* sync fork
* Merge of changes from dev
* Move problem option to bottom of the list until fixed
* HDFFV-11106 - fix parsing optional args
* HDFFV-11106 add note
* grammer fix
* Whitespace after clang formatting
* Undo format version 11 changes
* Update check to working version
* Merge workflow and minor changes from develop
* Update supported platforms
* PR#3 merge from develop
* Merge gcc 10 diagnostics option from develop
* Merge #318 OSX changes from develop
* Merge serval small changes from dev
* fix typo
* Minor non-space formatting changes
* GH #386 copyright corrections for java folder
* revert because logic requires false return
* Merges from develop
#358 patches from vtk
#361 fix header guard spelling
* Remove case statement for H5I_EVENTSET
* Correct call with versioning
* Remove tabs
* Double underscore change
* Merges from develop
#340 clang -Wformat-security warnings
#360 Fixed uninitialized warnings
Remove more underscores from header guards
* Merge #380 from develop
* Correct date entry
* Split format source and commit changes on repo push
* remove pre-split setting
* Change windows TS to use older VS.
* HDFFV-11212 JNI export util and Javadoc
* Suggested review changes
* Another change found
* Committing clang-format changes
* Some Javadoc warning fixes
* Committing clang-format changes
* Updated javadoc fixes
* HDFFV-11228/9 merges from develop
* remove obsolete debug comment
* Fix conflict
* HDFFV-11229 merge changes from develop
* HDFFV-11229 merge second compare from develop
* HDFFV-11229 fix reference file
* HDFFV-11229 update autotools test script for two ref files
* HDFFV-11229 merge dev changes for long double display in tools
* Committing clang-format changes
* Update with changes from develop
* Add "option" command for clang options
* Rework CMake add_custom to use the BYPRODUCTS argument
Update pkgconfig scripts for parallel builds.
Fix install COPYING file reference.
Remove unused round defines.
Change CMake default setting of BUILD_CPP to off.
* Whitespace changes
* Rework CMake add_custom to use the BYPRODUCTS argument
* Revert CMake configure checks for round defines
* With VS 2015 minimum strdup is supported
* Doxygen comments merged from develop
* doxygen build updates
* Correct version string for map functions
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
Diffstat (limited to 'src/H5Rpublic.h')
-rw-r--r-- | src/H5Rpublic.h | 787 |
1 files changed, 759 insertions, 28 deletions
diff --git a/src/H5Rpublic.h b/src/H5Rpublic.h index 4a82119..e26a72c 100644 --- a/src/H5Rpublic.h +++ b/src/H5Rpublic.h @@ -40,40 +40,54 @@ /* Public Typedefs */ /*******************/ -/* +//! <!-- [H5R_type_t_snip] --> +/** * Reference types allowed. - * DO NOT CHANGE THE ORDER or VALUES as reference type values are encoded into - * the datatype message header. + * + * \internal DO NOT CHANGE THE ORDER or VALUES as reference type values are + * encoded into the datatype message header. */ typedef enum { - H5R_BADTYPE = (-1), /* Invalid reference type */ - H5R_OBJECT1 = 0, /* Backward compatibility (object) */ - H5R_DATASET_REGION1 = 1, /* Backward compatibility (region) */ - H5R_OBJECT2 = 2, /* Object reference */ - H5R_DATASET_REGION2 = 3, /* Region reference */ - H5R_ATTR = 4, /* Attribute Reference */ - H5R_MAXTYPE = 5 /* Highest type (invalid) */ + H5R_BADTYPE = (-1), /**< Invalid reference type */ + H5R_OBJECT1 = 0, /**< Backward compatibility (object) */ + H5R_DATASET_REGION1 = 1, /**< Backward compatibility (region) */ + H5R_OBJECT2 = 2, /**< Object reference */ + H5R_DATASET_REGION2 = 3, /**< Region reference */ + H5R_ATTR = 4, /**< Attribute Reference */ + H5R_MAXTYPE = 5 /**< Highest type (invalid) */ } H5R_type_t; +//! <!-- [H5R_type_t_snip] --> /* Deprecated types are kept for backward compatibility with previous versions */ +//! <!-- [hobj_ref_t_snip] --> /** - * Deprecated object reference type that is used with deprecated reference APIs. - * Note! This type can only be used with the "native" HDF5 VOL connector. + * \deprecated Deprecated object reference type that is used with deprecated + * reference APIs. + * + * \note This type can only be used with the "native" HDF5 VOL connector. */ typedef haddr_t hobj_ref_t; +//! <!-- [hobj_ref_t_snip] --> +//! <!-- [hdset_reg_ref_t_snip] --> /** - * Dataset region reference type that is used with deprecated reference APIs. - * (Buffer to store heap ID and index) - * This needs to be large enough to store largest haddr_t in a worst case + * Buffer to store heap ID and index + * + * This needs to be large enough to store largest #haddr_t in a worst case * machine (8 bytes currently) plus an int. - * Note! This type can only be used with the "native" HDF5 VOL connector. + * + * \deprecated Dataset region reference type that is used with deprecated + * reference APIs. + * + * \note This type can only be used with the "native" HDF5 VOL connector. */ typedef struct { uint8_t __data[H5R_DSET_REG_REF_BUF_SIZE]; } hdset_reg_ref_t; +//! <!-- [hdset_reg_ref_t_snip] --> +//! <!-- [H5R_ref_t_snip] --> /** * Opaque reference type. The same reference type is used for object, * dataset region and attribute references. This is the type that @@ -81,10 +95,11 @@ typedef struct { */ typedef struct { union { - uint8_t __data[H5R_REF_BUF_SIZE]; /* opaque data */ - int64_t align; /* ensures alignment */ + uint8_t __data[H5R_REF_BUF_SIZE]; /**< opaque data */ + int64_t align; /**< ensures alignment */ } u; } H5R_ref_t; +//! <!-- [H5R_ref_t_snip] --> /********************/ /* Public Variables */ @@ -99,30 +114,427 @@ extern "C" { #endif /* Constructors */ +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Creates an object reference + * + * \fgdta_loc_id + * \param[in] name Name of object + * \oapl_id + * \param[out] ref_ptr Pointer to reference + * + * \return \herr_t + * + * \details H5Rcreate_object() creates a reference pointing to the + * object named \p name located at \p loc_id. The parameters \p + * loc_id and \p name are used to locate the object. + * + * The parameter \p oapl_id is an object access property list + * identifier for the referenced object. The access property list + * must be of the same type as the object being referenced, that is + * a group, dataset or committed datatype property list. + * + * \ref H5R_ref_t is defined in H5Rpublic.h as: + * \snippet this H5R_ref_t_snip + * + * H5Rdestroy() should be used to release the resource from the + * reference. + * + */ H5_DLL herr_t H5Rcreate_object(hid_t loc_id, const char *name, hid_t oapl_id, H5R_ref_t *ref_ptr); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Creates a region reference + * + * \fgdta_loc_id + * \param[in] name Name of object + * \space_id + * \oapl_id + * \param[out] ref_ptr Pointer to reference + * + * \return \herr_t + * + * \details H5Rcreate_region() creates the reference, \p ref_ptr, + * pointing to the region represented by \p space_id within the + * object named name located at \p loc_id. + * + * The parameters \p loc_id and \p name are used to locate the + * object. The parameter \p space_id identifies the dataset region + * that a dataset region reference points to. + * + * The parameter \p oapl_id is an object access property list + * identifier for the referenced object. The access property list + * must be of the same type as the object being referenced, that is + * a dataset property list in this case. + * + * \ref H5R_ref_t is defined in H5Rpublic.h as: + * \snippet this H5R_ref_t_snip + * + * H5Rdestroy() should be used to release the resource from the + * reference. + * + */ H5_DLL herr_t H5Rcreate_region(hid_t loc_id, const char *name, hid_t space_id, hid_t oapl_id, H5R_ref_t *ref_ptr); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Creates an attribute reference + * + * \fgdta_loc_id + * \param[in] name Name of object + * \param[in] attr_name Name of attribute + * \oapl_id + * \param[out] ref_ptr Pointer to reference + * + * \return \herr_t + * + * \details H5Rcreate_attr() creates the reference, \p ref_ptr, pointing + * to the attribute named \p attr_name and attached to the object + * named \p name located at \p loc_id. + * + * The parameters \p loc_id and \p name locate the object. The + * parameter \p attr_name specifies the attribute within the object. + * + * The parameter \p oapl_id is an object access property list + * identifier for the object that the referenced attribute is + * attached to. The access property list must be of the same type + * as that object, that is a group, dataset or committed datatype + * property list. + * + * \ref H5R_ref_t is defined in H5Rpublic.h as: + * \snippet this H5R_ref_t_snip + * + * H5Rdestroy() should be used to release the resource from the + * reference. + * + */ H5_DLL herr_t H5Rcreate_attr(hid_t loc_id, const char *name, const char *attr_name, hid_t oapl_id, H5R_ref_t *ref_ptr); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Closes a reference + * + * \param[in] ref_ptr Pointer to reference + * + * \return \herr_t + * + * \details Given a reference, \p ref_ptr, to an object, region or attribute + * attached to an object, H5Rdestroy() releases allocated resources + * from a previous create call. + * + * \ref H5R_ref_t is defined in H5Rpublic.h as: + * \snippet this H5R_ref_t_snip + * + */ H5_DLL herr_t H5Rdestroy(H5R_ref_t *ref_ptr); /* Info */ + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Retrieves the type of a reference + * + * \param[in] ref_ptr Pointer to reference + * + * \return Returns a valid reference type if successful; otherwise returns #H5R_BADTYPE . + * + * \details Given a reference, \p ref_ptr, H5Rget_type() returns the + * type of the reference. + * + * Valid returned reference types are: + * \snippet this H5R_type_t_snip + * + * Note that #H5R_OBJECT1 and #H5R_DATASET_REGION1 can never be + * associated to an \ref H5R_ref_t reference and can therefore never be + * returned through that function. + * + * \ref H5R_ref_t is defined in H5Rpublic.h as: + * \snippet this H5R_ref_t_snip + * + */ H5_DLL H5R_type_t H5Rget_type(const H5R_ref_t *ref_ptr); -H5_DLL htri_t H5Requal(const H5R_ref_t *ref1_ptr, const H5R_ref_t *ref2_ptr); -H5_DLL herr_t H5Rcopy(const H5R_ref_t *src_ref_ptr, H5R_ref_t *dst_ref_ptr); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Determines whether two references are equal + * + * \param[in] ref1_ptr Pointer to reference to compare + * \param[in] ref2_ptr Pointer to reference to compare + * + * \return Returns a positive value if the references are equal. Returns + * 0 if the references are not equal. Returns a negative value when the + * function fails. + * + * \details H5Requal() determines whether two references point to the + * same object, region or attribute. + * + * \ref H5R_ref_t is defined in H5Rpublic.h as: + * \snippet this H5R_ref_t_snip + * + */ +H5_DLL htri_t H5Requal(const H5R_ref_t *ref1_ptr, const H5R_ref_t *ref2_ptr); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Copies an existing reference + * + * \param[in] src_ref_ptr Pointer to reference to copy + * \param[out] dst_ref_ptr Pointer to output reference + * + * \return \herr_t + * + * \details H5Rcopy() creates a copy of an existing reference. + * \p src_ref_ptr points to the reference to copy and \p dst_ref_ptr is the + * pointer to the destination reference. + * + */ +H5_DLL herr_t H5Rcopy(const H5R_ref_t *src_ref_ptr, H5R_ref_t *dst_ref_ptr); /* Dereference */ + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Opens the HDF5 object referenced + * + * \param[in] ref_ptr Pointer to reference to open + * \rapl_id + * \oapl_id + * + * \return \hid_t{object} + * + * \details Given a reference, \p ref_ptr, to an object, a region in + * an object, or an attribute attached to an object, H5Ropen_object() + * opens that object and returns an identifier. + * + * The parameter \p oapl_id is an object access property list + * identifier for the referenced object. The access property list + * must be of the same type as the object being referenced, that is + * a group or dataset property list. + * + * \ref H5R_ref_t is defined in H5Rpublic.h as: + * \snippet this H5R_ref_t_snip + * + * The object opened with this function should be closed when it + * is no longer needed so that resource leaks will not develop. Use + * the appropriate close function such as H5Oclose() or H5Dclose() + * for datasets. + * + */ H5_DLL hid_t H5Ropen_object(H5R_ref_t *ref_ptr, hid_t rapl_id, hid_t oapl_id); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Sets up a dataspace and selection as specified by a region reference. + * + * \param[in] ref_ptr Pointer to reference to open + * \rapl_id + * \oapl_id + * + * \return \hid_t{dataspace} + * + * \details H5Ropen_region() creates a copy of the dataspace of the + * dataset pointed to by a region reference, \p ref_ptr, and defines + * a selection matching the selection pointed to by \p ref_ptr within + * the dataspace copy. + * + * The parameter \p rapl id is a reference access property list + * identifier for the reference. The access property list can + * be used to access external files that the reference points to + * (through a file access property list). + * + * The parameter \p oapl id is an object access property list + * identifier for the referenced object. The access property list + * must be of the same type as the object being referenced, that is + * a dataset property list in that case. + * + * Use H5Sclose() to release the dataspace identifier returned by + * this function when the identifier is no longer needed. + * + */ H5_DLL hid_t H5Ropen_region(H5R_ref_t *ref_ptr, hid_t rapl_id, hid_t oapl_id); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Opens the HDF5 attribute referenced + * + * \param[in] ref_ptr Pointer to reference to open + * \rapl_id + * \aapl_id + * + * \return \hid_t{attribute} + * + * \details Given a reference, \p ref_ptr, to an attribute attached to + * an object, H5Ropen_attr() opens the attribute attached to that + * object and returns an identifier. + * + * The parameter \p rapl id is a reference access property list + * identifier for the reference. The access property list can + * be used to access external files that the reference points to + * (through a file access property list). + * + * The parameter \p aapl_id is an attribute access property list + * identifier for the referenced attribute. + * + * The attribute opened with this function should be closed with + * H5Aclose() when it is no longer needed. + * + */ H5_DLL hid_t H5Ropen_attr(H5R_ref_t *ref_ptr, hid_t rapl_id, hid_t aapl_id); /* Get type */ + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Retrieves the type of object that an object reference points to + * + * \param[in] ref_ptr Pointer to reference to query + * \rapl_id + * \param[out] obj_type Type of referenced object + * + * \return \herr_t + * + * \details Given a reference, \p ref_ptr, H5Rget_obj_type3() retrieves + * the type of the referenced object in \p obj_type. + * + * The parameter \p rapl id is a reference access property list + * identifier for the reference. The access property list can + * be used to access external files that the reference points to + * (through a file access property list). + * + * Upon success, the function returns in \p obj_type the type of + * the object that the reference points to. Valid values for this + * referenced object type are as followed (defined in H5Opublic.h): + * \snippet H5Opublic.h H5O_type_t_snip + * + */ H5_DLL herr_t H5Rget_obj_type3(H5R_ref_t *ref_ptr, hid_t rapl_id, H5O_type_t *obj_type); /* Get name */ -H5_DLL ssize_t H5Rget_file_name(const H5R_ref_t *ref_ptr, char *buf, size_t size); -H5_DLL ssize_t H5Rget_obj_name(H5R_ref_t *ref_ptr, hid_t rapl_id, char *buf, size_t size); -H5_DLL ssize_t H5Rget_attr_name(const H5R_ref_t *ref_ptr, char *buf, size_t size); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Retrieves the file name for a referenced object + * + * \param[in] ref_ptr Pointer to reference to query + * \param[in,out] name Buffer to place the file name of the reference + * \param[in] size Size of the \p name buffer + * + * \return Returns the length of the name if successful, otherwise, a negative value. + * + * \details H5Rget_file_name() retrieves the file name for the object, + * region or attribute reference pointed to by \p ref_ptr. + * + * Up to \p size characters of the name are returned in \p name; + * additional characters, if any, are not returned to the user + * application. If the length of the name, which determines + * the required value of size, is unknown, a preliminary + * H5Rget_file_name() call can be made. The return value of this + * call will be the size of the file name. That value can then be + * passed in for size in the second call to H5Rget_file_name(), + * which will retrieve the actual name. + * + */ +H5_DLL ssize_t H5Rget_file_name(const H5R_ref_t *ref_ptr, char *name, size_t size); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Retrieves the object name for a referenced object + * + * \param[in] ref_ptr Pointer to reference to query + * \rapl_id + * \param[in,out] name Buffer to place the file name of the reference + * \param[in] size Size of the \p name buffer + * + * \return Returns the length of the name if successful, returning + * 0 (zero) if no name is associated with the identifier. Otherwise + * returns a negative value. + * + * \details H5Rget_obj_name() retrieves the object name for the object, + * region or attribute reference pointed to by \p ref_ptr. + * + * The parameter \p rapl_id is a reference access property list + * identifier for the reference. The access property list can + * be used to access external files that the reference points to + * (through a file access property list). + * + * Up to size characters of the name are returned in \p name; additional + * characters, if any, are not returned to the user application. If + * the length of the name, which determines the required value of + * \p size, is unknown, a preliminary call to H5Rget_obj_name() call + * can be made. The return value of this call will be the size of the + * object name. That value can then be passed in for \p size in the + * second call to H5Rget_obj_name(), which will retrieve the actual + * name. If there is no name associated with the object identifier + * or if the name is NULL, H5Rget_obj_name() returns the size of + * the name buffer (the size does not include the \c \0 terminator). + * + * If \p ref_ptr is an object reference, \p name will be returned with + * a name for the referenced object. If \p ref_ptr is a dataset region + * reference, \p name will contain a name for the object containing + * the referenced region. If \p ref_ptr is an attribute reference, \p + * name will contain a name for the object the attribute is attached + * to. Note that an object in an HDF5 file may have multiple paths + * if there are multiple links pointing to it. This function may + * return any one of these paths. + * + */ +H5_DLL ssize_t H5Rget_obj_name(H5R_ref_t *ref_ptr, hid_t rapl_id, char *name, size_t size); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Retrieves the attribute name for a referenced object + * + * \param[in] ref_ptr Pointer to reference to query + * \param[in,out] name Buffer to place the attribute name of the reference + * \param[in] size Size of the \p name buffer + * + * \return Returns the length of the name if successful, otherwise, a negative value. + * + * \details H5Rget_attr_name() retrieves the attribute name for the + * attribute reference pointed to by \p ref_ptr. + * + * Up to size characters of the name are returned in \p name; + * additional characters, if any, are not returned to the user + * application. If the length of the name, which determines + * the required value of \p size, is unknown, a preliminary + * H5Rget_attr_name() call can be made. The return value of this + * call will be the size of the attribute name. That value can then + * be passed in for size in the second call to H5Rget_attr_name(), + * which will retrieve the actual name. + * + */ +H5_DLL ssize_t H5Rget_attr_name(const H5R_ref_t *ref_ptr, char *name, size_t size); /* Symbols defined for compatibility with previous versions of the HDF5 API. * @@ -138,15 +550,334 @@ H5_DLL ssize_t H5Rget_attr_name(const H5R_ref_t *ref_ptr, char *buf, size_t size /* Function prototypes */ #ifndef H5_NO_DEPRECATED_SYMBOLS +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Retrieves the type of object that an object reference points to + * + * \param[in] id The dataset containing the reference object or the group + * containing that dataset + * \param[in] ref_type Type of reference to query + * \param[in] ref Reference to query + * + * \return Returns a valid object type if successful; otherwise returns a + * negative value (#H5G_UNKNOWN). + * + * \deprecated This function has been renamed from H5Rget_obj_type() and is + * deprecated in favor of the macro H5Rget_obj_type() or the + * function H5Rget_obj_type2(). + * + * \details Given an object reference, \p ref, H5Rget_obj_type1() returns the + * type of the referenced object. + * + * A \Emph{reference type} is the type of reference, either an object + * reference or a dataset region reference. An \Emph{object reference} + * points to an HDF5 object while a \Emph{dataset region reference} + * points to a defined region within a dataset. + * + * The \Emph{referenced object} is the object the reference points + * to. The \Emph{referenced object type}, or the type of the referenced + * object, is the type of the object that the reference points to. + * + * The location identifier, \p id, is the identifier for either the + * dataset containing the object reference or the group containing that + * dataset. + * + * Valid reference types, to pass in as \p ref_type, include the + * following: + * \snippet this H5R_type_t_snip + * + * If the application does not already know the object reference type, + * that can be determined with three preliminary calls: + * + * \li Call H5Dget_type() on the dataset containing the reference to + * get a datatype identifier for the dataset’s datatype. + * \li Using that datatype identifier, H5Tget_class() returns a datatype + * class.\n If the datatype class is #H5T_REFERENCE, H5Tequal() can + * then be used to determine whether the reference’s datatype is + * #H5T_STD_REF_OBJ or #H5T_STD_REF_DSETREG: + * - If the datatype is #H5T_STD_REF_OBJ, the reference object type + * is #H5R_OBJECT. + * - If the datatype is #H5T_STD_REF_DSETREG, the reference object + * type is #H5R_DATASET_REGION. + * + * When the function completes successfully, it returns one of the + * following valid object type values (defined in H5Gpublic.h): + * \snippet H5Gpublic.h H5G_obj_t_snip + * + * \version 1.8.0 Function H5Rget_obj_type() renamed to H5Rget_obj_type1() and + * deprecated in this release. + * \since 1.6.0 + * + */ H5_DLL H5G_obj_t H5Rget_obj_type1(hid_t id, H5R_type_t ref_type, const void *ref); -H5_DLL hid_t H5Rdereference1(hid_t obj_id, H5R_type_t ref_type, const void *ref); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Opens the HDF5 object referenced + * + * \obj_id + * \param[in] ref_type The reference type of \p ref + * \param[in] ref Reference to open + * + * \return Returns identifier of referenced object if successful; otherwise + * returns a negative value. + * + * \deprecated This function has been renamed from H5Rdereference() and is + * deprecated in favor of the macro H5Rdereference() or the function + * H5Rdereference2(). + * + * \details Given a reference, \p ref, to an object or a region in an object, + * H5Rdereference1() opens that object and returns an identifier. + * + * The parameter \p obj_id must be a valid identifier for an object in + * the HDF5 file containing the referenced object, including the file + * identifier. + * + * The parameter \p ref_type specifies the reference type of the + * reference \p ref. \p ref_type may contain either of the following + * values: + * - #H5R_OBJECT + * - #H5R_DATASET_REGION + * + * The object opened with this function should be closed when it is no + * longer needed so that resource leaks will not develop. Use the + * appropriate close function such as H5Oclose() or H5Dclose() for + * datasets. + * + * \version 1.10.0 Function H5Rdereference() renamed to H5Rdereference1() and + * deprecated in this release. + * \since 1.8.0 + * + */ +H5_DLL hid_t H5Rdereference1(hid_t obj_id, H5R_type_t ref_type, const void *ref); #endif /* H5_NO_DEPRECATED_SYMBOLS */ -H5_DLL herr_t H5Rcreate(void *ref, hid_t loc_id, const char *name, H5R_type_t ref_type, hid_t space_id); -H5_DLL herr_t H5Rget_obj_type2(hid_t id, H5R_type_t ref_type, const void *ref, H5O_type_t *obj_type); -H5_DLL hid_t H5Rdereference2(hid_t obj_id, hid_t oapl_id, H5R_type_t ref_type, const void *ref); -H5_DLL hid_t H5Rget_region(hid_t dataset, H5R_type_t ref_type, const void *ref); +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Creates a reference + * + * \param[out] ref Reference created by the function call + * \param[in] loc_id Location identifier used to locate the object being pointed to + * \param[in] name Name of object at location \p loc_id + * \param[in] ref_type Type of reference + * \param[in] space_id Dataspace identifier with selection. Used only for + * dataset region references; pass as -1 if reference is + * an object reference, i.e., of type #H5R_OBJECT + * + * \return \herr_t + * + * \details H5Rcreate() creates the reference, \p ref, of the type specified in + * \p ref_type, pointing to the object \p name located at \p loc_id. + * + * The HDF5 library maps the void type specified above for \p ref to + * the type specified in \p ref_type, which will be one of the following: + * \snippet this H5R_type_t_snip + * + * The parameters \p loc_id and \p name are used to locate the object. + * + * The parameter \p space_id identifies the dataset region that a + * dataset region reference points to. This parameter is used only with + * dataset region references and should be set to -1 if the reference + * is an object reference, #H5R_OBJECT. + * + * \since 1.8.0 + */ +H5_DLL herr_t H5Rcreate(void *ref, hid_t loc_id, const char *name, H5R_type_t ref_type, hid_t space_id); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Retrieves the type of object that an object reference points to + * + * \param[in] id The dataset containing the reference object or the group + * containing that dataset + * \param[in] ref_type Type of reference to query + * \param[in] ref Reference to query + * \param[out] obj_type Type of referenced object + * + * \return \herr_t + * + * \details Given an object reference, \p ref, H5Rget_obj_type2() returns the + * type of the referenced object in \p obj_type. + * + * A \Emph{reference type} is the type of reference, either an object + * reference or a dataset region reference. An \Emph{object reference} + * points to an HDF5 object while a \Emph{dataset region reference} + * points to a defined region within a dataset. + * + * The \Emph{referenced object} is the object the reference points + * to. The \Emph{referenced object type}, or the type of the referenced + * object, is the type of the object that the reference points to. + * + * The location identifier, \p id, is the identifier for either the + * dataset containing the object reference or the group containing that + * dataset. + * + * Valid reference types, to pass in as \p ref_type, include the + * following: + * \snippet this H5R_type_t_snip + * + * If the application does not already know the object reference type, + * that can be determined with three preliminary calls: + * + * \li Call H5Dget_type() on the dataset containing the reference to + * get a datatype identifier for the dataset’s datatype. + * \li Using that datatype identifier, H5Tget_class() returns a datatype + * class.\n If the datatype class is #H5T_REFERENCE, H5Tequal() can + * then be used to determine whether the reference’s datatype is + * #H5T_STD_REF_OBJ or #H5T_STD_REF_DSETREG: + * - If the datatype is #H5T_STD_REF_OBJ, the reference object type + * is #H5R_OBJECT. + * - If the datatype is #H5T_STD_REF_DSETREG, the reference object + * type is #H5R_DATASET_REGION. + * + * When the function completes successfully, it returns one of the + * following valid object type values (defined in H5Opublic.h): + * \snippet H5Opublic.h H5O_type_t_snip + * + * \since 1.8.0 + * + */ +H5_DLL herr_t H5Rget_obj_type2(hid_t id, H5R_type_t ref_type, const void *ref, H5O_type_t *obj_type); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Opens the HDF5 object referenced + * + * \obj_id + * \oapl_id + * \param[in] ref_type The reference type of \p ref + * \param[in] ref Reference to open + * + * \return Returns identifier of referenced object if successful; otherwise + * returns a negative value. + * + * \details Given a reference, \p ref, to an object or a region in an object, + * H5Rdereference2() opens that object and returns an identifier. + * + * The parameter \p obj_id must be a valid identifier for the HDF5 file + * containing the referenced object or for any object in that HDF5 + * file. + * + * The parameter \p oapl_id is an object access property list + * identifier for the referenced object. The access property list must + * be of the same type as the object being referenced, that is a group, + * dataset, or datatype property list. + * + * The parameter \p ref_type specifies the reference type of the + * reference \p ref. \p ref_type may contain either of the following + * values: + * - #H5R_OBJECT + * - #H5R_DATASET_REGION + * + * The object opened with this function should be closed when it is no + * longer needed so that resource leaks will not develop. Use the + * appropriate close function such as H5Oclose() or H5Dclose() for + * datasets. + * + * \since 1.10.0 + * + */ +H5_DLL hid_t H5Rdereference2(hid_t obj_id, hid_t oapl_id, H5R_type_t ref_type, const void *ref); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Sets up a dataspace and selection as specified by a region reference + * + * \param[in] dataset File identifier or identifier for any object in the file + * containing the referenced region + * \param[in] ref_type Reference type of \p ref, which must be #H5R_DATASET_REGION + * \param[in] ref Region reference to open + * + * \return Returns a valid dataspace identifier if successful; otherwise returns + * a negative value. + * + * \details H5Rget_region() creates a copy of the dataspace of the dataset + * pointed to by a region reference, \p ref, and defines a selection + * matching the selection pointed to by ref within the dataspace copy. + * + * \p dataset is used to identify the file containing the referenced + * region; it can be a file identifier or an identifier for any object + * in the file. + * + * The parameter \p ref_type specifies the reference type of \p ref and + * must contain the value #H5R_DATASET_REGION. + * + * Use H5Sclose() to release the dataspace identifier returned by this + * function when the identifier is no longer needed. + * + */ +H5_DLL hid_t H5Rget_region(hid_t dataset, H5R_type_t ref_type, const void *ref); + +/** + * -------------------------------------------------------------------------- + * \ingroup H5R + * + * \brief Retrieves a name for a referenced object + * + * \param[in] loc_id Identifier for the file containing the reference or for + * any object in that file + * \param[in] ref_type Type of reference + * \param[in] ref An object or dataset region reference + * \param[out] name A buffer to place the name of the referenced object or + * dataset region. If \c NULL, then this call will return the + * size in bytes of the name. + * \param[in] size The size of the \p name buffer. When the size is passed in, + * the \c NULL terminator needs to be included. + * + * \return Returns the length of the name if successful, returning 0 (zero) if + * no name is associated with the identifier. Otherwise returns a + * negative value. + * + * \details H5Rget_name() retrieves a name for the object identified by \p ref.\n + * \p loc_id is used to identify the file containing the reference. It + * can be the file identifier for the file containing the reference or + * an identifier for any object in that file. + * + * \ref H5R_type_t is the reference type of \p ref. Valid values + * include the following: + * \snippet this H5R_type_t_snip + * + * \p ref is the reference for which the target object’s name is + * sought. + * + * If \p ref is an object reference, \p name will be returned with a + * name for the referenced object. If \p ref is a dataset region + * reference, \p name will contain a name for the object containing the + * referenced region. + * + * Up to \p size characters of the name are returned in \p name; + * additional characters, if any, are not returned to the user + * application. + * + * If the length of the name, which determines the required value of \p + * size, is unknown, a preliminary H5Rget_name() call can be made. The + * return value of this call will be the size of the object name. That + * value can then be assigned to \p size for a second H5Rget_name() + * call, which will retrieve the actual name. + * + * If there is no name associated with the object identifier or if the + * \p name is \c NULL, H5Rget_name() returns the size of the \p name + * buffer (the size does not include the \p NULL terminator). + * + * Note that an object in an HDF5 file may have multiple paths if there + * are multiple links pointing to it. This function may return any one + * of these paths. + * + * \since 1.8.0 + */ H5_DLL ssize_t H5Rget_name(hid_t loc_id, H5R_type_t ref_type, const void *ref, char *name, size_t size); #ifdef __cplusplus |