Merge pull request #26 in ~VCHOI/my_third_fork from develop to bugfix/develop_seg_fault_sel_compat

* commit '9abbdeaa66c70a00b6a7bedee9c76d2493a8e947': (31 commits)
  Remove system command from valgrind reports
  Whitespace
  Fix incorrect FUNC_LEAVE macro (should match FUNC_ENTER_*_TAG).
  Add semicolons to more PASSED() invocations.
  So that I can use PASSED(); anywhere a statement can go, #define PASSED() with a do-while wrapper.
  revert type cast
  Switch the 'get offset' operation from a dataset 'get' callback to a [native] dataset 'optional' operation.
  Modfy expression to match mpicc build with Intel as intel compiler, not gcc.
  Complete the comment on thread_main(), explaining why the barrier is used.
  Fixed issue building HDF5 with NAG Fortran 7.0.
  The first implementation seemed to allow for the possibility that a thread could block at the barrier, wake and exit the barrier, re-acquire the barrier lock and increase `nentered` before the other blocked threads woke and checked `nentered % count == 0`.  Then the other blocked threads would check `nentered % count == 0` and, finding it false, go back to sleep in the barrier.  This new implementation waits for a looser condition to obtain so that threads don't go back to sleep in the barrier.
  Add java version and reference libsettings
  Test the right condition for the EBUSY return in pthread_barrier_destroy().
  s/exit_failure/EXIT_FAILURE/g
  Implement pthread_barrier(3) for Darwin using a counter, condition variable, and mutex.  Untested.
  Update examples and fix old version references.
  Move MODEL check to before usage in CTestScript.cmake.
  Copy generated files instead creating twice
  Fix standalone link
  Fix Fortran macro use and jni comment
  ...

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