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author | Quincey Koziol <koziol@hdfgroup.org> | 2014-06-13 06:23:57 (GMT) |
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committer | Quincey Koziol <koziol@hdfgroup.org> | 2014-06-13 06:23:57 (GMT) |
commit | 4ccb865c70f977a4a97d75df3d6e792c8cbdfdd8 (patch) | |
tree | 860f585f1589250b03aec29371acb13ebbf2e022 /src/H5Stest.c | |
parent | c2bc22d51cdf528c9b04ec115ac22c7e79fd7c6d (diff) | |
download | hdf5-4ccb865c70f977a4a97d75df3d6e792c8cbdfdd8.zip hdf5-4ccb865c70f977a4a97d75df3d6e792c8cbdfdd8.tar.gz hdf5-4ccb865c70f977a4a97d75df3d6e792c8cbdfdd8.tar.bz2 |
[svn-r25273] Description:
Bring in Chao/Neil/my changes to optimize hyperslab selection operations
further, along with 3 new public API routines: H5Scombine_hyperslab(),
H5Sselect_select() and H5Scombine_select(), along with many minor cleanups to
the code and fixing a few compiler warnings.
Tested on:
Mac OSX/64 10.9.3 w/gcc 4.9.x and parallel w/OpenMPI
(h5commttest forthcoming)
Diffstat (limited to 'src/H5Stest.c')
-rw-r--r-- | src/H5Stest.c | 273 |
1 files changed, 266 insertions, 7 deletions
diff --git a/src/H5Stest.c b/src/H5Stest.c index 62a4179..0e2a72d 100644 --- a/src/H5Stest.c +++ b/src/H5Stest.c @@ -77,12 +77,18 @@ done: NAME H5S_get_rebuild_status_test PURPOSE - Determine the status of hyperslab rebuild + Determine the status of the diminfo_valid field (whether we know the + selection information for an equivalent single hyperslab selection) + before and after calling H5S_hyper_rebuild. USAGE - htri_t H5S_inquiry_rebuild_status(hid_t space_id) + herr_t H5S_inquiry_rebuild_status(hid_t space_id) hid_t space_id; IN: dataspace id + H5S_diminfo_valid_t *status1; OUT: status before calling + H5S_hyper_rebuild + H5S_diminfo_valid_t *status2; OUT: status after calling + H5S_hyper_rebuild RETURNS - Non-negative TRUE/FALSE on success, negative on failure + Non-negative on success, negative on failure DESCRIPTION Query the status of rebuilding the hyperslab GLOBAL VARIABLES @@ -91,21 +97,274 @@ done: EXAMPLES REVISION LOG --------------------------------------------------------------------------*/ -htri_t -H5S_get_rebuild_status_test(hid_t space_id) +herr_t +H5S_get_rebuild_status_test(hid_t space_id, H5S_diminfo_valid_t *status1, + H5S_diminfo_valid_t *status2) { H5S_t *space; /* Pointer to 1st dataspace */ - htri_t ret_value; /* Return value */ + herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(FAIL) + HDassert(status1); + HDassert(status2); + /* Get dataspace structures */ if(NULL == (space = (H5S_t *)H5I_object_verify(space_id, H5I_DATASPACE))) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace") - ret_value = (htri_t)space->select.sel_info.hslab->diminfo_valid; + *status1 = space->select.sel_info.hslab->diminfo_valid; + + /* Fully rebuild diminfo, if necessary */ + if(*status1 == H5S_DIMINFO_VALID_NO) + if(H5S_hyper_rebuild(space) < 0) + HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCOUNT, FAIL, "can't update hyperslab info") + + *status2 = space->select.sel_info.hslab->diminfo_valid; done: FUNC_LEAVE_NOAPI(ret_value) } /* H5S_get_rebuild_status_test() */ + +/*-------------------------------------------------------------------------- + NAME + H5S_get_diminfo_status_test + PURPOSE + Determine the status of the diminfo_valid field (whether we know the + selection information for an equivalent single hyperslab selection) + USAGE + herr_t H5S_inquiry_rebuild_status(hid_t space_id) + hid_t space_id; IN: dataspace id + H5S_diminfo_valid_t *status; OUT: status of diminfo_valid + RETURNS + Non-negative on success, negative on failure + DESCRIPTION + Query the status of rebuilding the hyperslab + GLOBAL VARIABLES + COMMENTS, BUGS, ASSUMPTIONS + DO NOT USE THIS FUNCTION FOR ANYTHING EXCEPT TESTING + EXAMPLES + REVISION LOG +--------------------------------------------------------------------------*/ +herr_t +H5S_get_diminfo_status_test(hid_t space_id, H5S_diminfo_valid_t *status) +{ + H5S_t *space; /* Pointer to 1st dataspace */ + herr_t ret_value = SUCCEED; /* Return value */ + + FUNC_ENTER_NOAPI(FAIL) + + HDassert(status); + + /* Get dataspace structures */ + if(NULL == (space = (H5S_t *)H5I_object_verify(space_id, H5I_DATASPACE))) + HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace") + + *status = space->select.sel_info.hslab->diminfo_valid; + +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* H5S_get_diminfo_status_test() */ + +/*-------------------------------------------------------------------------- + NAME + H5S_check_spans_tail_ptr + PURPOSE + Determine if the tail pointer of the spans are correctly set + USAGE + herr_t H5S_check_spans_tail_ptr(span_lst) + const H5S_hyper_span_info_t *span_lst; IN: the spans to check for taill pointers + RETURNS + SUCCEED/FAIL + DESCRIPTION + Checks to see if the current selection in the dataspaces has tail pointers of each + dimension correctly set. + GLOBAL VARIABLES + COMMENTS, BUGS, ASSUMPTIONS + Only check the hyperslab selection + EXAMPLES + REVISION LOG +--------------------------------------------------------------------------*/ +static herr_t +H5S_check_spans_tail_ptr(const H5S_hyper_span_info_t *span_lst) +{ + H5S_hyper_span_t *cur_elem; + H5S_hyper_span_t *actual_tail = NULL; + htri_t ret_value = TRUE; /* Return value */ + + FUNC_ENTER_NOAPI_NOINIT + + HDassert(span_lst); + + cur_elem = span_lst->head; + while(cur_elem) { + actual_tail = cur_elem; + + /* check the next dimension of lower order */ + if(NULL != cur_elem->down) + if((ret_value = H5S_check_spans_tail_ptr(cur_elem->down)) < 0) + HGOTO_ERROR(H5E_DATASPACE, H5E_INCONSISTENTSTATE, FAIL, "the seletion has inconsistent tail pointers") + + cur_elem = cur_elem->next; + } /* end while */ + if(actual_tail != span_lst->tail) + HGOTO_ERROR(H5E_DATASPACE, H5E_INCONSISTENTSTATE, FAIL, "the seletion has inconsistent tail pointers") + +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* H5S_check_spans_tail_ptr */ + +/*-------------------------------------------------------------------------- + NAME + H5S_check_points_tail_ptr + PURPOSE + Determine if the tail pointer of the points list are correctly set + USAGE + herr_t H5S_check_points_tail_ptr(pnt_lst) + const H5S_pnt_list_t *pnt_lst; IN: the points list to check for taill pointers + RETURNS + SUCCEED/FAIL + DESCRIPTION + Checks to see if the current selection in the dataspaces has tail pointers correctly set. + GLOBAL VARIABLES + COMMENTS, BUGS, ASSUMPTIONS + Only check the points selection + EXAMPLES + REVISION LOG +--------------------------------------------------------------------------*/ +static herr_t +H5S_check_points_tail_ptr(const H5S_pnt_list_t *pnt_lst) +{ + H5S_pnt_node_t *cur_elem; + H5S_pnt_node_t *actual_tail = NULL; + htri_t ret_value = TRUE; /* Return value */ + + FUNC_ENTER_NOAPI_NOINIT + + HDassert(pnt_lst); + + cur_elem = pnt_lst->head; + while(cur_elem) { + actual_tail = cur_elem; + cur_elem = cur_elem->next; + } /* end while */ + if(actual_tail != pnt_lst->tail) + HGOTO_ERROR(H5E_DATASPACE, H5E_INCONSISTENTSTATE, FAIL, "the seletion has inconsistent tail pointers") + +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* H5S_check_points_tail_ptr */ + + +/*-------------------------------------------------------------------------- + NAME + H5S_check_internal_consistency + PURPOSE + Determine if internal data structures are consistent + USAGE + herr_t H5S_check_internal_consistency(space) + const H5S_t *space; IN: 1st Dataspace pointer to compare + RETURNS + SUCCEED/FAIL + DESCRIPTION + Checks to see if the current selection in the dataspaces has consistent + state of internal data structure. + GLOBAL VARIABLES + COMMENTS, BUGS, ASSUMPTIONS + Currently only check the hyperslab selection + EXAMPLES + REVISION LOG +--------------------------------------------------------------------------*/ +static herr_t +H5S_check_internal_consistency(const H5S_t *space) +{ + hsize_t low_bounds[H5S_MAX_RANK]; + hsize_t high_bounds[H5S_MAX_RANK]; + unsigned u; + herr_t ret_value = SUCCEED; /* Return value */ + + FUNC_ENTER_NOAPI(FAIL) + + /* Check args */ + HDassert(space); + + if(space->select.type->type == H5S_SEL_NONE) + HGOTO_DONE(ret_value); + + /* Initialize the inputs */ + for(u = 0; u < space->extent.rank; u++) { + low_bounds[u] = HSIZET_MAX; + high_bounds[u] = 0; + } /* end for */ + + /* Check the bound box */ + if(H5S_get_select_bounds(space, low_bounds, high_bounds) < 0) + HGOTO_ERROR(H5E_DATASPACE, H5E_INCONSISTENTSTATE, FAIL, "the bound box could not be retrieved") + + for(u = 0; u < space->extent.rank; u++) { + if((hsize_t)((hssize_t)space->select.low_bounds[u] + space->select.offset[u]) != low_bounds[u]) + HGOTO_ERROR(H5E_DATASPACE, H5E_INCONSISTENTSTATE, FAIL, "the lower bound box of the selection is inconsistent") + if((hsize_t)((hssize_t)space->select.high_bounds[u] + space->select.offset[u]) != high_bounds[u]) + HGOTO_ERROR(H5E_DATASPACE, H5E_INCONSISTENTSTATE, FAIL, "the higher bound box of the selection is inconsistent") + } /* end for */ + + if(space->select.type->type == H5S_SEL_HYPERSLABS) { + H5S_hyper_sel_t *hslab = space->select.sel_info.hslab; + + /* check the tail pointer */ + if((NULL != hslab) && (NULL != hslab->span_lst)) + if(H5S_check_spans_tail_ptr(hslab->span_lst) < 0) + HGOTO_ERROR(H5E_DATASPACE, H5E_INCONSISTENTSTATE, FAIL, "the seletion has inconsistent tail pointers") + } /* end if */ + else if(space->select.type->type == H5S_SEL_POINTS) { + H5S_pnt_list_t *pnt_lst = space->select.sel_info.pnt_lst; + + if(NULL != pnt_lst) + if(H5S_check_points_tail_ptr(pnt_lst) < 0) + HGOTO_ERROR(H5E_DATASPACE, H5E_INCONSISTENTSTATE, FAIL, "the seletion has inconsistent tail pointers") + } /* end else-if */ + +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* H5S_check_internal_consistency */ + +/*-------------------------------------------------------------------------- + NAME + H5S_internal_consistency_test + PURPOSE + Determine if states of internal data structures are consistent + USAGE + htri_t H5S_internal_consistency_test(hid_t space_id) + hid_t space_id; IN: dataspace id + RETURNS + Non-negative TRUE/FALSE on success, negative on failure + DESCRIPTION + Check the states of internal data structures of the hyperslab, and see + whether they are consistent or not + GLOBAL VARIABLES + COMMENTS, BUGS, ASSUMPTIONS + DO NOT USE THIS FUNCTION FOR ANYTHING EXCEPT TESTING + EXAMPLES + REVISION LOG +--------------------------------------------------------------------------*/ +htri_t +H5S_internal_consistency_test(hid_t space_id) +{ + H5S_t *space; /* Pointer to 1st dataspace */ + htri_t ret_value = TRUE; /* Return value */ + + FUNC_ENTER_NOAPI(FAIL) + + /* Get dataspace structures */ + if(NULL == (space = (H5S_t *)H5I_object_verify(space_id, H5I_DATASPACE))) + HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace") + + /* Check if the dataspace selections are the same shape */ + if(FAIL == H5S_check_internal_consistency(space)) + HGOTO_ERROR(H5E_DATASPACE, H5E_INCONSISTENTSTATE, FAIL, "The dataspace has inconsistent internal state") + +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* H5S_internal_consistency_test() */ + |