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authorQuincey Koziol <koziol@hdfgroup.org>2003-11-13 15:19:50 (GMT)
committerQuincey Koziol <koziol@hdfgroup.org>2003-11-13 15:19:50 (GMT)
commite1792ebb22c1fee3eb349b83543e6e915bd1e6f7 (patch)
tree6e3f936d7809ff0191d17454ba0cb6047abda784 /src/H5Tvlen.c
parent71f3513337e800f6500551448559cecc6853aca9 (diff)
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[svn-r7842] Purpose:
Bug fix Description: Variable length strings and sequences with NULL pointers were not handled by library, causing problems access the data. This also affected fill values for variable-length datatypes. Solution: Address the issues in the library by detecting NULL sequences/strings and avoid trying to convert them. Patched up dumper to display NULL sequences/strings. Platforms tested: FreeBSD 4.9 (sleipnir) h5committest
Diffstat (limited to 'src/H5Tvlen.c')
-rw-r--r--src/H5Tvlen.c402
1 files changed, 311 insertions, 91 deletions
diff --git a/src/H5Tvlen.c b/src/H5Tvlen.c
index 1b113a7..13ff95f 100644
--- a/src/H5Tvlen.c
+++ b/src/H5Tvlen.c
@@ -43,6 +43,21 @@ H5FL_EXTERN(H5T_t);
/* Local functions */
static herr_t H5T_vlen_reclaim_recurse(void *elem, const H5T_t *dt, H5MM_free_t free_func, void *free_info);
+static hssize_t H5T_vlen_seq_mem_getlen(void *_vl);
+static htri_t H5T_vlen_seq_mem_isnull(H5F_t *f, void *_vl);
+static herr_t H5T_vlen_seq_mem_read(H5F_t *f, hid_t dxpl_id, void *_vl, void *_buf, size_t len);
+static herr_t H5T_vlen_seq_mem_write(H5F_t *f, hid_t dxpl_id, void *_vl, void *_buf, void *_bg, hsize_t seq_len, hsize_t base_size);
+static herr_t H5T_vlen_seq_mem_setnull(H5F_t *f, hid_t dxpl_id, void *_vl, void *_bg);
+static hssize_t H5T_vlen_str_mem_getlen(void *_vl);
+static htri_t H5T_vlen_str_mem_isnull(H5F_t *f, void *_vl);
+static herr_t H5T_vlen_str_mem_read(H5F_t *f, hid_t dxpl_id, void *_vl, void *_buf, size_t len);
+static herr_t H5T_vlen_str_mem_write(H5F_t *f, hid_t dxpl_id, void *_vl, void *_buf, void *_bg, hsize_t seq_len, hsize_t base_size);
+static herr_t H5T_vlen_str_mem_setnull(H5F_t *f, hid_t dxpl_id, void *_vl, void *_bg);
+static hssize_t H5T_vlen_disk_getlen(void *_vl);
+static htri_t H5T_vlen_disk_isnull(H5F_t *f, void *_vl);
+static herr_t H5T_vlen_disk_read(H5F_t *f, hid_t dxpl_id, void *_vl, void *_buf, size_t len);
+static herr_t H5T_vlen_disk_write(H5F_t *f, hid_t dxpl_id, void *_vl, void *_buf, void *_bg, hsize_t seq_len, hsize_t base_size);
+static herr_t H5T_vlen_disk_setnull(H5F_t *f, hid_t dxpl_id, void *_vl, void *_bg);
/*--------------------------------------------------------------------------
@@ -214,16 +229,20 @@ H5T_vlen_set_loc(H5T_t *dt, H5F_t *f, H5T_loc_t loc)
/* Set up the function pointers to access the VL sequence in memory */
dt->u.vlen.getlen=H5T_vlen_seq_mem_getlen;
+ dt->u.vlen.isnull=H5T_vlen_seq_mem_isnull;
dt->u.vlen.read=H5T_vlen_seq_mem_read;
dt->u.vlen.write=H5T_vlen_seq_mem_write;
+ dt->u.vlen.setnull=H5T_vlen_seq_mem_setnull;
} else if(dt->u.vlen.type==H5T_VLEN_STRING) {
/* size in memory, disk size is different */
dt->size = sizeof(char *);
/* Set up the function pointers to access the VL string in memory */
dt->u.vlen.getlen=H5T_vlen_str_mem_getlen;
+ dt->u.vlen.isnull=H5T_vlen_str_mem_isnull;
dt->u.vlen.read=H5T_vlen_str_mem_read;
dt->u.vlen.write=H5T_vlen_str_mem_write;
+ dt->u.vlen.setnull=H5T_vlen_str_mem_setnull;
} else {
assert(0 && "Invalid VL type");
}
@@ -248,8 +267,10 @@ H5T_vlen_set_loc(H5T_t *dt, H5F_t *f, H5T_loc_t loc)
/* Set up the function pointers to access the VL information on disk */
/* VL sequences and VL strings are stored identically on disk, so use the same functions */
dt->u.vlen.getlen=H5T_vlen_disk_getlen;
+ dt->u.vlen.isnull=H5T_vlen_disk_isnull;
dt->u.vlen.read=H5T_vlen_disk_read;
dt->u.vlen.write=H5T_vlen_disk_write;
+ dt->u.vlen.setnull=H5T_vlen_disk_setnull;
/* Set file ID (since this VL is on disk) */
dt->u.vlen.f=f;
@@ -279,27 +300,50 @@ done:
*
*-------------------------------------------------------------------------
*/
-/* ARGSUSED */
-hssize_t
-H5T_vlen_seq_mem_getlen(H5F_t UNUSED *f, void *vl_addr)
+static hssize_t
+H5T_vlen_seq_mem_getlen(void *_vl)
{
- hvl_t *vl=(hvl_t *)vl_addr; /* Pointer to the user's hvl_t information */
- hssize_t ret_value; /* Return value */
+ hvl_t *vl=(hvl_t *)_vl; /* Pointer to the user's hvl_t information */
- FUNC_ENTER_NOAPI(H5T_vlen_seq_mem_getlen, FAIL)
+ FUNC_ENTER_NOINIT(H5T_vlen_seq_mem_getlen)
/* check parameters */
assert(vl);
- /* Set return value */
- ret_value=(hssize_t)vl->len;
-
-done:
- FUNC_LEAVE_NOAPI(ret_value)
+ FUNC_LEAVE_NOAPI((hssize_t)vl->len)
} /* end H5T_vlen_seq_mem_getlen() */
/*-------------------------------------------------------------------------
+ * Function: H5T_vlen_seq_mem_isnull
+ *
+ * Purpose: Checks if a memory sequence is the "null" sequence
+ *
+ * Return: TRUE/FALSE on success/Negative on failure
+ *
+ * Programmer: Quincey Koziol
+ * Saturday, November 8, 2003
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+/* ARGSUSED */
+static htri_t
+H5T_vlen_seq_mem_isnull(H5F_t UNUSED *f, void *_vl)
+{
+ hvl_t *vl=(hvl_t *)_vl; /* Pointer to the user's hvl_t information */
+
+ FUNC_ENTER_NOINIT(H5T_vlen_seq_mem_isnull)
+
+ /* check parameters */
+ assert(vl);
+
+ FUNC_LEAVE_NOAPI((vl->len==0 || vl->p==NULL) ? TRUE : FALSE)
+} /* end H5T_vlen_seq_mem_isnull() */
+
+
+/*-------------------------------------------------------------------------
* Function: H5T_vlen_seq_mem_read
*
* Purpose: "Reads" the memory based VL sequence into a buffer
@@ -314,13 +358,12 @@ done:
*-------------------------------------------------------------------------
*/
/* ARGSUSED */
-herr_t
-H5T_vlen_seq_mem_read(H5F_t UNUSED *f, hid_t UNUSED dxpl_id, void *vl_addr, void *buf, size_t len)
+static herr_t
+H5T_vlen_seq_mem_read(H5F_t UNUSED *f, hid_t UNUSED dxpl_id, void *_vl, void *buf, size_t len)
{
- hvl_t *vl=(hvl_t *)vl_addr; /* Pointer to the user's hvl_t information */
- herr_t ret_value=SUCCEED; /* Return value */
+ hvl_t *vl=(hvl_t *)_vl; /* Pointer to the user's hvl_t information */
- FUNC_ENTER_NOAPI(H5T_vlen_seq_mem_read, FAIL)
+ FUNC_ENTER_NOINIT(H5T_vlen_seq_mem_read)
/* check parameters */
assert(vl && vl->p);
@@ -328,8 +371,7 @@ H5T_vlen_seq_mem_read(H5F_t UNUSED *f, hid_t UNUSED dxpl_id, void *vl_addr, void
HDmemcpy(buf,vl->p,len);
-done:
- FUNC_LEAVE_NOAPI(ret_value)
+ FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5T_vlen_seq_mem_read() */
@@ -348,8 +390,8 @@ done:
*-------------------------------------------------------------------------
*/
/* ARGSUSED */
-herr_t
-H5T_vlen_seq_mem_write(H5F_t UNUSED *f, hid_t dxpl_id, void *vl_addr, void *buf, void UNUSED *bg_addr, hsize_t seq_len, hsize_t base_size)
+static herr_t
+H5T_vlen_seq_mem_write(H5F_t UNUSED *f, hid_t dxpl_id, void *_vl, void *buf, void UNUSED *_bg, hsize_t seq_len, hsize_t base_size)
{
H5MM_allocate_t alloc_func; /* Vlen allocation function */
void *alloc_info; /* Vlen allocation information */
@@ -358,10 +400,10 @@ H5T_vlen_seq_mem_write(H5F_t UNUSED *f, hid_t dxpl_id, void *vl_addr, void *buf,
H5P_genplist_t *plist; /* Property list */
herr_t ret_value=SUCCEED; /* Return value */
- FUNC_ENTER_NOAPI(H5T_vlen_seq_mem_write, FAIL)
+ FUNC_ENTER_NOINIT(H5T_vlen_seq_mem_write)
/* check parameters */
- assert(vl_addr);
+ assert(_vl);
assert(buf);
if(seq_len!=0) {
@@ -397,7 +439,7 @@ H5T_vlen_seq_mem_write(H5F_t UNUSED *f, hid_t dxpl_id, void *vl_addr, void *buf,
H5_ASSIGN_OVERFLOW(vl.len,seq_len,hsize_t,size_t);
/* Set pointer in user's buffer with memcpy, to avoid alignment issues */
- HDmemcpy(vl_addr,&vl,sizeof(hvl_t));
+ HDmemcpy(_vl,&vl,sizeof(hvl_t));
done:
FUNC_LEAVE_NOAPI(ret_value)
@@ -405,6 +447,42 @@ done:
/*-------------------------------------------------------------------------
+ * Function: H5T_vlen_seq_mem_setnull
+ *
+ * Purpose: Sets a VL info object in memory to the "nil" value
+ *
+ * Return: Non-negative on success/Negative on failure
+ *
+ * Programmer: Quincey Koziol
+ * Saturday, November 8, 2003
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+/* ARGSUSED */
+static herr_t
+H5T_vlen_seq_mem_setnull(H5F_t UNUSED *f, hid_t UNUSED dxpl_id, void *_vl, void UNUSED *_bg)
+{
+ hvl_t vl; /* Temporary hvl_t to use during operation */
+
+ FUNC_ENTER_NOINIT(H5T_vlen_seq_mem_setnull)
+
+ /* check parameters */
+ assert(_vl);
+
+ /* Set the "nil" hvl_t */
+ vl.len=0;
+ vl.p=NULL;
+
+ /* Set pointer in user's buffer with memcpy, to avoid alignment issues */
+ HDmemcpy(_vl,&vl,sizeof(hvl_t));
+
+ FUNC_LEAVE_NOAPI(SUCCEED)
+} /* end H5T_vlen_seq_mem_setnull() */
+
+
+/*-------------------------------------------------------------------------
* Function: H5T_vlen_str_mem_getlen
*
* Purpose: Retrieves the length of a memory based VL string.
@@ -418,27 +496,47 @@ done:
*
*-------------------------------------------------------------------------
*/
-/* ARGSUSED */
-hssize_t
-H5T_vlen_str_mem_getlen(H5F_t UNUSED *f, void *vl_addr)
+static hssize_t
+H5T_vlen_str_mem_getlen(void *_vl)
{
- char *s=*(char **)vl_addr; /* Pointer to the user's hvl_t information */
- hssize_t ret_value; /* Return value */
+ char *s=*(char **)_vl; /* Pointer to the user's string information */
- FUNC_ENTER_NOAPI(H5T_vlen_str_mem_getlen, FAIL)
+ FUNC_ENTER_NOINIT(H5T_vlen_str_mem_getlen)
- /* Set return value */
- if(s)
- ret_value=(hssize_t)HDstrlen(s);
- else
- HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "null pointer")
+ /* check parameters */
+ assert(s);
-done:
- FUNC_LEAVE_NOAPI(ret_value)
+ FUNC_LEAVE_NOAPI((hssize_t)HDstrlen(s))
} /* end H5T_vlen_str_mem_getlen() */
/*-------------------------------------------------------------------------
+ * Function: H5T_vlen_str_mem_isnull
+ *
+ * Purpose: Checks if a memory string is a NULL pointer
+ *
+ * Return: TRUE/FALSE on success/Negative on failure
+ *
+ * Programmer: Quincey Koziol
+ * Saturday, November 8, 2003
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+/* ARGSUSED */
+static htri_t
+H5T_vlen_str_mem_isnull(H5F_t UNUSED *f, void *_vl)
+{
+ char *s=*(char **)_vl; /* Pointer to the user's string information */
+
+ FUNC_ENTER_NOINIT(H5T_vlen_str_mem_isnull)
+
+ FUNC_LEAVE_NOAPI(s==NULL ? TRUE : FALSE);
+} /* end H5T_vlen_str_mem_isnull() */
+
+
+/*-------------------------------------------------------------------------
* Function: H5T_vlen_str_mem_read
*
* Purpose: "Reads" the memory based VL string into a buffer
@@ -453,13 +551,12 @@ done:
*-------------------------------------------------------------------------
*/
/* ARGSUSED */
-herr_t
-H5T_vlen_str_mem_read(H5F_t UNUSED *f, hid_t UNUSED dxpl_id, void *vl_addr, void *buf, size_t len)
+static herr_t
+H5T_vlen_str_mem_read(H5F_t UNUSED *f, hid_t UNUSED dxpl_id, void *_vl, void *buf, size_t len)
{
- char *s=*(char **)vl_addr; /* Pointer to the user's hvl_t information */
- herr_t ret_value=SUCCEED; /* Return value */
+ char *s=*(char **)_vl; /* Pointer to the user's hvl_t information */
- FUNC_ENTER_NOAPI(H5T_vlen_str_mem_read, FAIL)
+ FUNC_ENTER_NOINIT(H5T_vlen_str_mem_read)
/* check parameters */
assert(s);
@@ -468,8 +565,7 @@ H5T_vlen_str_mem_read(H5F_t UNUSED *f, hid_t UNUSED dxpl_id, void *vl_addr, void
if(len>0)
HDmemcpy(buf,s,len);
-done:
- FUNC_LEAVE_NOAPI(ret_value)
+ FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5T_vlen_str_mem_read() */
@@ -488,8 +584,8 @@ done:
*-------------------------------------------------------------------------
*/
/* ARGSUSED */
-herr_t
-H5T_vlen_str_mem_write(H5F_t UNUSED *f, hid_t dxpl_id, void *vl_addr, void *buf, void UNUSED *bg_addr, hsize_t seq_len, hsize_t base_size)
+static herr_t
+H5T_vlen_str_mem_write(H5F_t UNUSED *f, hid_t dxpl_id, void *_vl, void *buf, void UNUSED *_bg, hsize_t seq_len, hsize_t base_size)
{
H5MM_allocate_t alloc_func; /* Vlen allocation function */
void *alloc_info; /* Vlen allocation information */
@@ -498,7 +594,7 @@ H5T_vlen_str_mem_write(H5F_t UNUSED *f, hid_t dxpl_id, void *vl_addr, void *buf,
H5P_genplist_t *plist; /* Property list */
herr_t ret_value=SUCCEED; /* Return value */
- FUNC_ENTER_NOAPI(H5T_vlen_str_mem_write, FAIL)
+ FUNC_ENTER_NOINIT(H5T_vlen_str_mem_write)
/* check parameters */
assert(buf);
@@ -528,7 +624,7 @@ H5T_vlen_str_mem_write(H5F_t UNUSED *f, hid_t dxpl_id, void *vl_addr, void *buf,
t[len]='\0';
/* Set pointer in user's buffer with memcpy, to avoid alignment issues */
- HDmemcpy(vl_addr,&t,sizeof(char *));
+ HDmemcpy(_vl,&t,sizeof(char *));
done:
FUNC_LEAVE_NOAPI(ret_value) /*lint !e429 The pointer in 't' has been copied */
@@ -536,6 +632,35 @@ done:
/*-------------------------------------------------------------------------
+ * Function: H5T_vlen_str_mem_setnull
+ *
+ * Purpose: Sets a VL info object in memory to the "null" value
+ *
+ * Return: Non-negative on success/Negative on failure
+ *
+ * Programmer: Quincey Koziol
+ * Saturday, November 8, 2003
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+/* ARGSUSED */
+static herr_t
+H5T_vlen_str_mem_setnull(H5F_t UNUSED *f, hid_t UNUSED dxpl_id, void *_vl, void UNUSED *_bg)
+{
+ char *t=NULL; /* Pointer to temporary buffer allocated */
+
+ FUNC_ENTER_NOINIT(H5T_vlen_str_mem_write)
+
+ /* Set pointer in user's buffer with memcpy, to avoid alignment issues */
+ HDmemcpy(_vl,&t,sizeof(char *));
+
+ FUNC_LEAVE_NOAPI(SUCCEED) /*lint !e429 The pointer in 't' has been copied */
+} /* end H5T_vlen_str_mem_setnull() */
+
+
+/*-------------------------------------------------------------------------
* Function: H5T_vlen_disk_getlen
*
* Purpose: Retrieves the length of a disk based VL element.
@@ -549,26 +674,59 @@ done:
*
*-------------------------------------------------------------------------
*/
-/* ARGSUSED */
-hssize_t
-H5T_vlen_disk_getlen(H5F_t UNUSED *f, void *vl_addr)
+static hssize_t
+H5T_vlen_disk_getlen(void *_vl)
{
- uint8_t *vl=(uint8_t *)vl_addr; /* Pointer to the disk VL information */
- hssize_t ret_value; /*return value */
+ uint8_t *vl=(uint8_t *)_vl; /* Pointer to the disk VL information */
+ hssize_t seq_len; /* Sequence length */
- FUNC_ENTER_NOAPI(H5T_vlen_disk_getlen, FAIL)
+ FUNC_ENTER_NOINIT(H5T_vlen_disk_getlen)
/* check parameters */
assert(vl);
- UINT32DECODE(vl, ret_value);
+ UINT32DECODE(vl, seq_len);
-done:
- FUNC_LEAVE_NOAPI(ret_value)
+ FUNC_LEAVE_NOAPI(seq_len)
} /* end H5T_vlen_disk_getlen() */
/*-------------------------------------------------------------------------
+ * Function: H5T_vlen_disk_isnull
+ *
+ * Purpose: Checks if a disk VL info object is the "nil" object
+ *
+ * Return: TRUE/FALSE on success/Negative on failure
+ *
+ * Programmer: Quincey Koziol
+ * Saturday, November 8, 2003
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+static htri_t
+H5T_vlen_disk_isnull(H5F_t *f, void *_vl)
+{
+ uint8_t *vl=(uint8_t *)_vl; /* Pointer to the disk VL information */
+ haddr_t addr; /* Sequence's heap address */
+
+ FUNC_ENTER_NOINIT(H5T_vlen_disk_isnull)
+
+ /* check parameters */
+ assert(vl);
+
+ /* Skip the sequence's length */
+ vl+=4;
+
+ /* Get the heap address */
+ H5F_addr_decode(f,(const uint8_t **)&vl,&addr);
+
+ FUNC_LEAVE_NOAPI(addr==0 ? TRUE : FALSE)
+} /* end H5T_vlen_disk_isnull() */
+
+
+/*-------------------------------------------------------------------------
* Function: H5T_vlen_disk_read
*
* Purpose: Reads the disk based VL element into a buffer
@@ -583,15 +741,15 @@ done:
*-------------------------------------------------------------------------
*/
/* ARGSUSED */
-herr_t
-H5T_vlen_disk_read(H5F_t *f, hid_t dxpl_id, void *vl_addr, void *buf, size_t UNUSED len)
+static herr_t
+H5T_vlen_disk_read(H5F_t *f, hid_t dxpl_id, void *_vl, void *buf, size_t UNUSED len)
{
- uint8_t *vl=(uint8_t *)vl_addr; /* Pointer to the user's hvl_t information */
+ uint8_t *vl=(uint8_t *)_vl; /* Pointer to the user's hvl_t information */
H5HG_t hobjid;
uint32_t seq_len;
herr_t ret_value=SUCCEED; /* Return value */
- FUNC_ENTER_NOAPI(H5T_vlen_disk_read, FAIL)
+ FUNC_ENTER_NOINIT(H5T_vlen_disk_read)
/* check parameters */
assert(vl);
@@ -601,14 +759,14 @@ H5T_vlen_disk_read(H5F_t *f, hid_t dxpl_id, void *vl_addr, void *buf, size_t UNU
/* Get the length of the sequence */
UINT32DECODE(vl, seq_len); /* Not used */
- /* Check if this sequence actually has any data */
- if(seq_len!=0) {
- /* Get the heap information */
- H5F_addr_decode(f,(const uint8_t **)&vl,&(hobjid.addr));
- INT32DECODE(vl,hobjid.idx);
+ /* Get the heap information */
+ H5F_addr_decode(f,(const uint8_t **)&vl,&(hobjid.addr));
+ INT32DECODE(vl,hobjid.idx);
+ /* Check if this sequence actually has any data */
+ if(hobjid.addr>0) {
/* Read the VL information from disk */
- if(H5HG_read(f,dxpl_id, &hobjid,buf)==NULL)
+ if(H5HG_read(f,dxpl_id,&hobjid,buf)==NULL)
HGOTO_ERROR(H5E_DATATYPE, H5E_READERROR, FAIL, "Unable to read VL information")
} /* end if */
@@ -635,35 +793,37 @@ done:
*
*-------------------------------------------------------------------------
*/
-herr_t
-H5T_vlen_disk_write(H5F_t *f, hid_t dxpl_id, void *vl_addr, void *buf, void *bg_addr, hsize_t seq_len, hsize_t base_size)
+static herr_t
+H5T_vlen_disk_write(H5F_t *f, hid_t dxpl_id, void *_vl, void *buf, void *_bg, hsize_t seq_len, hsize_t base_size)
{
- uint8_t *vl=(uint8_t *)vl_addr; /*Pointer to the user's hvl_t information*/
- uint8_t *bg=(uint8_t *)bg_addr; /*Pointer to the old data hvl_t */
- H5HG_t hobjid;
- H5HG_t bg_hobjid;
- size_t len;
- hsize_t bg_seq_len=0;
+ uint8_t *vl=(uint8_t *)_vl; /*Pointer to the user's hvl_t information*/
+ uint8_t *bg=(uint8_t *)_bg; /*Pointer to the old data hvl_t */
+ H5HG_t hobjid; /* New VL sequence's heap ID */
+ size_t len; /* Size of new sequence on disk (in bytes) */
herr_t ret_value=SUCCEED; /* Return value */
- FUNC_ENTER_NOAPI(H5T_vlen_disk_write, FAIL)
+ FUNC_ENTER_NOINIT(H5T_vlen_disk_write)
/* check parameters */
assert(vl);
assert(buf);
assert(f);
- /* Get the length of the sequence and heap object ID from background data.
- * Free heap object for old data. */
+ /* Free heap object for old data. */
if(bg!=NULL) {
+ hsize_t bg_seq_len=0; /* "Background" VL info sequence's length */
+ H5HG_t bg_hobjid; /* "Background" VL info sequence's ID info */
+
+ /* Get the length of the sequence and heap object ID from background data. */
HDmemset(&bg_hobjid,0,sizeof(H5HG_t));
UINT32DECODE(bg, bg_seq_len);
+ /* Get heap information */
+ H5F_addr_decode(f, (const uint8_t **)&bg, &(bg_hobjid.addr));
+ INT32DECODE(bg, bg_hobjid.idx);
+
/* Free heap object for old data */
- if(bg_seq_len>0) {
- /* Get heap information */
- H5F_addr_decode(f, (const uint8_t **)&bg, &(bg_hobjid.addr));
- INT32DECODE(bg, bg_hobjid.idx);
+ if(bg_hobjid.addr>0) {
/* Free heap object */
if(H5HG_remove(f, dxpl_id, &bg_hobjid)<0)
HGOTO_ERROR(H5E_DATATYPE, H5E_WRITEERROR, FAIL, "Unable to remove heap object")
@@ -674,17 +834,12 @@ H5T_vlen_disk_write(H5F_t *f, hid_t dxpl_id, void *vl_addr, void *buf, void *bg_
H5_CHECK_OVERFLOW(seq_len,hsize_t,size_t);
UINT32ENCODE(vl, seq_len);
- /* Check if this sequence actually has any data */
- if(seq_len!=0) {
- /* Write the VL information to disk (allocates space also) */
- H5_ASSIGN_OVERFLOW(len,(seq_len*base_size),hsize_t,size_t);
- if(H5HG_insert(f,dxpl_id, len,buf,&hobjid)<0)
- HGOTO_ERROR(H5E_DATATYPE, H5E_WRITEERROR, FAIL, "Unable to write VL information")
- } /* end if */
- else
- HDmemset(&hobjid,0,sizeof(H5HG_t));
+ /* Write the VL information to disk (allocates space also) */
+ H5_ASSIGN_OVERFLOW(len,(seq_len*base_size),hsize_t,size_t);
+ if(H5HG_insert(f,dxpl_id,len,buf,&hobjid)<0)
+ HGOTO_ERROR(H5E_DATATYPE, H5E_WRITEERROR, FAIL, "Unable to write VL information")
- /* Get the heap information */
+ /* Encode the heap information */
H5F_addr_encode(f,&vl,hobjid.addr);
INT32ENCODE(vl,hobjid.idx);
@@ -693,6 +848,71 @@ done:
} /* end H5T_vlen_disk_write() */
+/*-------------------------------------------------------------------------
+ * Function: H5T_vlen_disk_setnull
+ *
+ * Purpose: Sets a VL info object on disk to the "nil" value
+ *
+ * Return: Non-negative on success/Negative on failure
+ *
+ * Programmer: Quincey Koziol
+ * Saturday, November 8, 2003
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+static herr_t
+H5T_vlen_disk_setnull(H5F_t *f, hid_t dxpl_id, void *_vl, void *_bg)
+{
+ uint8_t *vl=(uint8_t *)_vl; /*Pointer to the user's hvl_t information*/
+ uint8_t *bg=(uint8_t *)_bg; /*Pointer to the old data hvl_t */
+ uint32_t seq_len=0; /* Sequence length */
+ H5HG_t hobjid; /* New VL sequence's heap ID */
+ herr_t ret_value=SUCCEED; /* Return value */
+
+ FUNC_ENTER_NOINIT(H5T_vlen_disk_setnull)
+
+ /* check parameters */
+ assert(f);
+ assert(vl);
+
+ /* Free heap object for old data. */
+ if(bg!=NULL) {
+ hsize_t bg_seq_len=0; /* "Background" VL info sequence's length */
+ H5HG_t bg_hobjid; /* "Background" VL info sequence's ID info */
+
+ /* Get the length of the sequence and heap object ID from background data. */
+ HDmemset(&bg_hobjid,0,sizeof(H5HG_t));
+ UINT32DECODE(bg, bg_seq_len);
+
+ /* Get heap information */
+ H5F_addr_decode(f, (const uint8_t **)&bg, &(bg_hobjid.addr));
+ INT32DECODE(bg, bg_hobjid.idx);
+
+ /* Free heap object for old data */
+ if(bg_hobjid.addr>0) {
+ /* Free heap object */
+ if(H5HG_remove(f, dxpl_id, &bg_hobjid)<0)
+ HGOTO_ERROR(H5E_DATATYPE, H5E_WRITEERROR, FAIL, "Unable to remove heap object")
+ } /* end if */
+ } /* end if */
+
+ /* Set the length of the sequence */
+ UINT32ENCODE(vl, seq_len);
+
+ /* Set the "nil" pointer information for the heap ID */
+ HDmemset(&hobjid,0,sizeof(H5HG_t));
+
+ /* Encode the heap information */
+ H5F_addr_encode(f,&vl,hobjid.addr);
+ INT32ENCODE(vl,hobjid.idx);
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5T_vlen_disk_setnull() */
+
+
/*--------------------------------------------------------------------------
NAME
H5T_vlen_reclaim_recurse