diff options
| author | Binh-Minh Ribler <bmribler@hdfgroup.org> | 2018-07-14 13:10:49 (GMT) |
|---|---|---|
| committer | Binh-Minh Ribler <bmribler@hdfgroup.org> | 2018-07-14 13:10:49 (GMT) |
| commit | fafa49ef7fcced8d1cfe17305a66b07b95d11813 (patch) | |
| tree | 6aec8166f964ecaa0311965fd02bf8ede6fcbe40 /src | |
| parent | ef30425b1c4095d2b1e5c0abd9fee7432b46e56c (diff) | |
| parent | ec31438afdaf575368938e930eb3af0865a342b3 (diff) | |
| download | hdf5-fafa49ef7fcced8d1cfe17305a66b07b95d11813.zip hdf5-fafa49ef7fcced8d1cfe17305a66b07b95d11813.tar.gz hdf5-fafa49ef7fcced8d1cfe17305a66b07b95d11813.tar.bz2 | |
Merge pull request #1133 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp4:develop to develop
Fixed HDFFV-10404
* commit 'ec31438afdaf575368938e930eb3af0865a342b3':
Fixed HDFFV-10404 Description: Applied the typo fixes from user's report. The previous pull request couldn't be merged because it was too old, and it was too complicated for me to resolve conflicts. Platform tested: Linux/64 (jelly) - very minor
Diffstat (limited to 'src')
79 files changed, 252 insertions, 253 deletions
@@ -470,7 +470,7 @@ H5dont_atexit(void) * library, which are supposed to free any unused memory they have * allocated. * - * These should probably be registered dynamicly in a linked list of + * These should probably be registered dynamically in a linked list of * functions to call, but there aren't that many right now, so we * hard-wire them... * @@ -785,7 +785,7 @@ H5check_version(unsigned majnum, unsigned minnum, unsigned relnum) HDfprintf (stderr, "%s", H5libhdf5_settings); break; default: - /* 2 or higer: continue silently */ + /* 2 or higher: continue silently */ break; } /* end switch */ @@ -318,7 +318,7 @@ H5AC_create(const H5F_t *f, H5AC_cache_config_t *config_ptr, H5AC_cache_image_co HGOTO_ERROR(H5E_VFL, H5E_CANTGET, FAIL, "can't get mpi size") if(NULL == (aux_ptr = H5FL_CALLOC(H5AC_aux_t))) - HGOTO_ERROR(H5E_CACHE, H5E_CANTALLOC, FAIL, "Can't allocate H5AC auxilary structure") + HGOTO_ERROR(H5E_CACHE, H5E_CANTALLOC, FAIL, "Can't allocate H5AC auxiliary structure") aux_ptr->magic = H5AC__H5AC_AUX_T_MAGIC; aux_ptr->mpi_comm = mpi_comm; @@ -432,7 +432,7 @@ H5AC_create(const H5F_t *f, H5AC_cache_config_t *config_ptr, H5AC_cache_image_co done: #ifdef H5_HAVE_PARALLEL - /* if there is a failure, try to tidy up the auxilary structure */ + /* if there is a failure, try to tidy up the auxiliary structure */ if(ret_value < 0) { if(aux_ptr != NULL) { if(aux_ptr->d_slist_ptr != NULL) @@ -1878,7 +1878,7 @@ done: * from the cache, clear it, and free it without writing it to * disk. * - * This verion of the function is a complete re-write to + * This version of the function is a complete re-write to * use the new metadata cache. While there isn't all that * much difference between the old and new Purpose sections, * the original version is given below. diff --git a/src/H5ACmpio.c b/src/H5ACmpio.c index 7671abc..b60b933 100644 --- a/src/H5ACmpio.c +++ b/src/H5ACmpio.c @@ -933,7 +933,7 @@ done: * * Purpose: Update the dirty_bytes count for a newly inserted entry. * - * If mpi_rank isnt 0, this simply means adding the size + * If mpi_rank isn't 0, this simply means adding the size * of the entry to the dirty_bytes count. * * If mpi_rank is 0, we must also add the entry to the @@ -1332,7 +1332,7 @@ done: * clean. * * This function is the main routine for handling this - * notification proceedure. It must be called + * notification procedure. It must be called * simultaniously on all processes that have the relevant * file open. To this end, it is called only during a * sync point, with a barrier prior to the call. @@ -1340,7 +1340,7 @@ done: * Note that any metadata entry writes by process 0 will * occur after the barrier and just before this call. * - * Typicaly, calls to this function will be triggered in + * Typically, calls to this function will be triggered in * one of two ways: * * 1) Dirty byte creation exceeds some user specified value. @@ -2128,7 +2128,7 @@ HDfprintf(stdout, "%d:H5AC_propagate...:%u: (u/uu/i/iu/r/ru) = %zu/%u/%zu/%u/%zu /* clear collective access flag on half of the entries in the cache and mark them as independent in case they need to be - evicted later. All ranks are guranteed to mark the same entries + evicted later. All ranks are guaranteed to mark the same entries since we don't modify the order of the collectively accessed entries except through collective access. */ if(H5C_clear_coll_entries(cache_ptr, TRUE) < 0) diff --git a/src/H5ACpkg.h b/src/H5ACpkg.h index 409d914..9bf84bf 100644 --- a/src/H5ACpkg.h +++ b/src/H5ACpkg.h @@ -189,7 +189,7 @@ H5FL_EXTERN(H5AC_aux_t); * is permitted to write to file. * * dirty_bytes_threshold: Integer field containing the dirty bytes - * generation threashold. Whenever dirty byte creation + * generation threshold. Whenever dirty byte creation * exceeds this value, the metadata cache on process 0 * broadcasts a list of the entries it has flushed since * the last broadcast (or since the beginning of execution) diff --git a/src/H5ACpublic.h b/src/H5ACpublic.h index 654a877..a48aa69 100644 --- a/src/H5ACpublic.h +++ b/src/H5ACpublic.h @@ -39,7 +39,7 @@ extern "C" { * structure H5AC_cache_config_t * * H5AC_cache_config_t is a public structure intended for use in public APIs. - * At least in its initial incarnation, it is basicaly a copy of struct + * At least in its initial incarnation, it is basically a copy of struct * H5C_auto_size_ctl_t, minus the report_fcn field, and plus the * dirty_bytes_threshold field. * @@ -212,7 +212,7 @@ extern "C" { * * flash_incr_mode: Instance of the H5C_cache_flash_incr_mode enumerated * type whose value indicates whether and by which algorithm we should - * make flash increases in the size of the cache to accomodate insertion + * make flash increases in the size of the cache to accommodate insertion * of large entries and large increases in the size of a single entry. * * The addition of the flash increment mode was occasioned by performance @@ -379,7 +379,7 @@ extern "C" { * synchronize updates between caches. (See above for outline and * motivation.) * - * This value MUST be consistant across all processes accessing the + * This value MUST be consistent across all processes accessing the * file. This field is ignored unless HDF5 has been compiled for * parallel. * diff --git a/src/H5Aint.c b/src/H5Aint.c index e666e8c..55560c7 100644 --- a/src/H5Aint.c +++ b/src/H5Aint.c @@ -1152,7 +1152,7 @@ H5A__free(H5A_t *attr) HDassert(attr); - /* Free dynamicly allocated items */ + /* Free dynamically allocated items */ if(attr->shared->name) { H5MM_xfree(attr->shared->name); attr->shared->name = NULL; @@ -1235,7 +1235,7 @@ H5A__close(H5A_t *attr) /* Reference count can be 0. It only happens when H5A__create fails. */ if(attr->shared->nrefs <= 1) { - /* Free dynamicly allocated items */ + /* Free dynamically allocated items */ if(H5A__free(attr) < 0) HGOTO_ERROR(H5E_ATTR, H5E_CANTRELEASE, FAIL, "can't release attribute info") diff --git a/src/H5Apkg.h b/src/H5Apkg.h index 3315cc1..af16b55 100644 --- a/src/H5Apkg.h +++ b/src/H5Apkg.h @@ -86,7 +86,7 @@ typedef struct H5A_shared_t { void *data; /* Attribute data (on a temporary basis) */ size_t data_size; /* Size of data on disk */ H5O_msg_crt_idx_t crt_idx; /* Attribute's creation index in the object header */ - unsigned nrefs; /* Ref count for times this object is refered */ + unsigned nrefs; /* Ref count for times this object is referred */ } H5A_shared_t; /* Define the main attribute structure */ @@ -769,7 +769,7 @@ H5B__insert_child(H5B_t *bt, unsigned *bt_flags, unsigned idx, * the specified type. * * On return, if LT_KEY_CHANGED is non-zero, then LT_KEY is - * the new native left key. Similarily for RT_KEY_CHANGED + * the new native left key. Similarly for RT_KEY_CHANGED * and RT_KEY. * * If the node splits, then MD_KEY contains the key that diff --git a/src/H5B2internal.c b/src/H5B2internal.c index 95ed769..7f6b80a 100644 --- a/src/H5B2internal.c +++ b/src/H5B2internal.c @@ -1192,7 +1192,7 @@ H5B2__remove_internal_by_idx(H5B2_hdr_t *hdr, hbool_t *depth_decreased, if(swap_loc) idx = 0; else { - /* Count from the orginal index value again */ + /* Count from the original index value again */ n = orig_n; /* Reset "found" flag - the record may have shifted during the diff --git a/src/H5Bprivate.h b/src/H5Bprivate.h index 270b4e6..e203b87 100644 --- a/src/H5Bprivate.h +++ b/src/H5Bprivate.h @@ -122,7 +122,7 @@ typedef struct H5B_class_t { H5B_ins_t (*insert)(H5F_t*, haddr_t, void*, hbool_t*, void*, void*, void*, hbool_t*, haddr_t*); - /* min insert uses min leaf, not new(), similarily for max insert */ + /* min insert uses min leaf, not new(), similarly for max insert */ hbool_t follow_min; hbool_t follow_max; @@ -793,8 +793,8 @@ H5C_prep_for_file_close(H5F_t *f) * close, and since the close warning is issued after all * non FSM related space allocations and just before the * first sync point on close, this call will leave the caches - * in a consistant state across the processes if they were - * consistant before. + * in a consistent state across the processes if they were + * consistent before. * * 2) Since the FSM settle routines are only invoked once during * file close, invoking them now will prevent their invocation @@ -2255,7 +2255,7 @@ H5C_protect(H5F_t * f, if(entry_ptr != NULL) { if(entry_ptr->ring != ring) - HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, NULL, "ring type mismatch occured for cache entry") + HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, NULL, "ring type mismatch occurred for cache entry") HDassert(entry_ptr->magic == H5C__H5C_CACHE_ENTRY_T_MAGIC); @@ -3095,7 +3095,7 @@ H5C_unprotect(H5F_t *f, haddr_t addr, void *thing, unsigned flags) * * All this is a bit awkward, but until the metadata cache entries * are contiguous, with only one dirty flag, we have to let the supplied - * functions deal with the reseting the is_dirty flag. + * functions deal with the resetting the is_dirty flag. */ if(entry_ptr->clear_on_unprotect) { /* Sanity check */ @@ -5029,7 +5029,7 @@ H5C__flash_increase_cache_size(H5C_t * cache_ptr, if ( (cache_ptr->resize_ctl).rpt_fcn != NULL ) { /* get the hit rate for the reporting function. Should still - * be good as we havent reset the hit rate statistics. + * be good as we haven't reset the hit rate statistics. */ if(H5C_get_cache_hit_rate(cache_ptr, &hit_rate) != SUCCEED) HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Can't get hit rate") @@ -5272,7 +5272,7 @@ H5C_flush_invalidate_ring(H5F_t * f, H5C_ring_t ring, unsigned flags) cooked_flags = flags & H5C__FLUSH_CLEAR_ONLY_FLAG; evict_flags = flags & H5C__EVICT_ALLOW_LAST_PINS_FLAG; - /* The flush proceedure here is a bit strange. + /* The flush procedure here is a bit strange. * * In the outer while loop we make at least one pass through the * cache, and then repeat until either all the pinned entries in @@ -5421,7 +5421,7 @@ H5C_flush_invalidate_ring(H5F_t * f, H5C_ring_t ring, unsigned flags) * * While this optimization used to be easy, with the possibility * of new entries being added to the slist in the midst of the - * flush, we must keep the slist in cannonical form at all + * flush, we must keep the slist in canonical form at all * times. */ if(((!entry_ptr->flush_me_last) || @@ -6280,7 +6280,7 @@ H5C__flush_single_entry(H5F_t *f, H5C_cache_entry_t *entry_ptr, unsigned flags) entry_addr = entry_ptr->addr; /* Internal cache data structures should now be up to date, and - * consistant with the status of the entry. + * consistent with the status of the entry. * * Now discard the entry if appropriate. */ @@ -6301,10 +6301,10 @@ H5C__flush_single_entry(H5F_t *f, H5C_cache_entry_t *entry_ptr, unsigned flags) entry_ptr->image_ptr = H5MM_xfree(entry_ptr->image_ptr); /* If the entry is not a prefetched entry, verify that the flush - * dependency parents addresses array has been transfered. + * dependency parents addresses array has been transferred. * * If the entry is prefetched, the free_isr routine will dispose of - * the flush dependency parents adresses array if necessary. + * the flush dependency parents addresses array if necessary. */ if(!entry_ptr->prefetched) { HDassert(0 == entry_ptr->fd_parent_count); @@ -8587,7 +8587,7 @@ H5C__generate_image(H5F_t *f, H5C_t *cache_ptr, H5C_cache_entry_t *entry_ptr) * tests will be necessary. */ if(cache_ptr->aux_ptr != NULL) - HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "resize/move in serialize occured in parallel case") + HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "resize/move in serialize occurred in parallel case") #endif /* If required, resize the buffer and update the entry and the cache @@ -8787,7 +8787,7 @@ H5C_remove_entry(void *_entry) cache->entry_watched_for_removal = NULL; /* Internal cache data structures should now be up to date, and - * consistant with the status of the entry. + * consistent with the status of the entry. * * Now clean up internal cache fields if appropriate. */ diff --git a/src/H5Cimage.c b/src/H5Cimage.c index 51de5c4..26b6506 100644 --- a/src/H5Cimage.c +++ b/src/H5Cimage.c @@ -1494,7 +1494,7 @@ H5C__prep_image_for_file_close(H5F_t *f, hbool_t *image_generated) * if the underlying file alignment is greater than 1. * * Clean this up eventually by extending the size of the cache - * image block to the next alignement boundary, and then setting + * image block to the next alignment boundary, and then setting * the image_data_len to the actual size of the cache_image. * * On the off chance that there is some other way to get a @@ -1554,7 +1554,7 @@ H5C__prep_image_for_file_close(H5F_t *f, hbool_t *image_generated) * metadata cache image superblock extension message, set * cache_ptr->image_ctl.generate_image to FALSE. This will * allow the file close to continue normally without the - * unecessary generation of the metadata cache image. + * unnecessary generation of the metadata cache image. */ if(cache_ptr->num_entries_in_image > 0) { if(H5C__prep_for_file_close__setup_image_entries_array(cache_ptr) < 0) diff --git a/src/H5Cmpio.c b/src/H5Cmpio.c index e342d69..ecaed62 100644 --- a/src/H5Cmpio.c +++ b/src/H5Cmpio.c @@ -380,7 +380,7 @@ H5C_apply_candidate_list(H5F_t * f, * Note that we are doing things in this round about manner so as * to preserve the order of the LRU list to the best of our ability. * If we don't do this, my experiments indicate that we will have a - * noticably poorer hit ratio as a result. + * noticeably poorer hit ratio as a result. */ if(H5C__flush_candidate_entries(f, entries_to_flush, entries_to_clear) < 0) HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, "flush candidates failed") diff --git a/src/H5Cpkg.h b/src/H5Cpkg.h index c5dc8f3..98d7a01 100644 --- a/src/H5Cpkg.h +++ b/src/H5Cpkg.h @@ -58,7 +58,7 @@ * We maintain doubly linked lists of instances of H5C_cache_entry_t for a * variety of reasons -- protected list, LRU list, and the clean and dirty * LRU lists at present. The following macros support linking and unlinking - * of instances of H5C_cache_entry_t by both their regular and auxilary next + * of instances of H5C_cache_entry_t by both their regular and auxiliary next * and previous pointers. * * The size and length fields are also maintained. @@ -2006,7 +2006,7 @@ if ( ( (cache_ptr)->index_size != \ * a bit more performance out of the cache. * * At least for the first cut, I am leaving the comments and - * white space in the macro. If they cause dificulties with + * white space in the macro. If they cause difficulties with * the pre-processor, I'll have to remove them. * * JRM - 7/28/04 @@ -2117,7 +2117,7 @@ if ( ( (cache_ptr)->index_size != \ * a bit more performance out of the cache. * * At least for the first cut, I am leaving the comments and - * white space in the macro. If they cause dificulties with + * white space in the macro. If they cause difficulties with * pre-processor, I'll have to remove them. * * JRM - 7/28/04 @@ -2375,7 +2375,7 @@ if ( ( (cache_ptr)->index_size != \ * a bit more performance out of the cache. * * At least for the first cut, I am leaving the comments and - * white space in the macro. If they cause dificulties with + * white space in the macro. If they cause difficulties with * pre-processor, I'll have to remove them. * * JRM - 7/28/04 @@ -2513,7 +2513,7 @@ if ( ( (cache_ptr)->index_size != \ * a bit more performance out of the cache. * * At least for the first cut, I am leaving the comments and - * white space in the macro. If they cause dificulties with + * white space in the macro. If they cause difficulties with * pre-processor, I'll have to remove them. * * JRM - 7/28/04 @@ -3057,7 +3057,7 @@ if ( ( (cache_ptr)->index_size != \ * squeeze a bit more performance out of the cache. * * At least for the first cut, I am leaving the comments and - * white space in the macro. If they cause dificulties with + * white space in the macro. If they cause difficulties with * pre-processor, I'll have to remove them. * * JRM - 7/28/04 @@ -3892,7 +3892,7 @@ typedef struct H5C_tag_info_t { * 2) A pinned entry can be accessed or modified at any time. * This places an additional burden on the associated pre-serialize * and serialize callbacks, which must ensure the the entry is in - * a consistant state before creating an image of it. + * a consistent state before creating an image of it. * * 3) A pinned entry can be marked as dirty (and possibly * change size) while it is unprotected. @@ -4604,7 +4604,7 @@ typedef struct H5C_tag_info_t { * improper behavior if the next entry in the list is the target of one on * these operations. * - * The following fields are use to count such occurances. They are used + * The following fields are use to count such occurrences. They are used * both in tests (to verify that the scan has been restarted), and to * obtain estimates of how frequently these restarts occur. * @@ -4624,7 +4624,7 @@ typedef struct H5C_tag_info_t { * than the target entry as the result of call(s) to the * pre_serialize or serialize callbacks. * - * Note that at present, this condition can only be triggerd + * Note that at present, this condition can only be triggered * by a call to H5C_serialize_single_entry(). * * The remaining stats are collected only when both H5C_COLLECT_CACHE_STATS diff --git a/src/H5Cprivate.h b/src/H5Cprivate.h index 522b3cf..38a86ee 100644 --- a/src/H5Cprivate.h +++ b/src/H5Cprivate.h @@ -87,7 +87,7 @@ #define H5C__MIN_MAX_CACHE_SIZE ((size_t)(1024)) /* Default max cache size and min clean size are give here to make - * them generally accessable. + * them generally accessible. */ #define H5C__DEFAULT_MAX_CACHE_SIZE ((size_t)(4 * 1024 * 1024)) #define H5C__DEFAULT_MIN_CLEAN_SIZE ((size_t)(2 * 1024 * 1024)) @@ -901,7 +901,7 @@ typedef struct H5C_class_t { H5C_get_fsf_size_t fsf_size; } H5C_class_t; -/* Type defintions of callback functions used by the cache as a whole */ +/* Type definitions of callback functions used by the cache as a whole */ typedef herr_t (*H5C_write_permitted_func_t)(const H5F_t *f, hbool_t *write_permitted_ptr); typedef herr_t (*H5C_log_flush_func_t)(H5C_t *cache_ptr, haddr_t addr, @@ -925,7 +925,7 @@ typedef herr_t (*H5C_log_flush_func_t)(H5C_t *cache_ptr, haddr_t addr, * flush dependency -- with the implied setup and takedown overhead and * added complexity. Further, the flush ordering between rings need only * be enforced on flush operations, and thus the use of flush dependencies - * instead would apply unecessary constraints on flushes under normal + * instead would apply unnecessary constraints on flushes under normal * operating circumstances. * * As of this writing, all metadata entries pretaining to data sets and @@ -1092,7 +1092,7 @@ typedef int H5C_ring_t; * 2) A pinned entry can be accessed or modified at any time. * This places an extra burden on the pre-serialize and * serialize callbacks, which must ensure that a pinned - * entry is consistant and ready to write to disk before + * entry is consistent and ready to write to disk before * generating an image. * * 3) A pinned entry can be marked as dirty (and possibly @@ -1152,7 +1152,7 @@ typedef int H5C_ring_t; * flush_immediately: Boolean flag used only in Phdf5 -- and then only * for H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED. * - * When a destributed metadata write is triggered at a + * When a distributed metadata write is triggered at a * sync point, this field is used to mark entries that * must be flushed before leaving the sync point. At all * other times, this field should be set to FALSE. @@ -1430,7 +1430,7 @@ typedef int H5C_ring_t; * The flush dependency height of any entry involved in a * flush dependency relationship is defined to be the * longest flush dependency path from that entry to an entry - * with no flush depenency children. + * with no flush dependency children. * * Since the image_fd_height is used to order entries in the * cache image so that fd parents preceed fd children, for @@ -1468,8 +1468,8 @@ typedef int H5C_ring_t; * * Further, if the prefetched entry is a flush dependency parent, * all its flush dependency children (which must also be - * prefetched entries), must be tranfered to the new cache - * entry returned by the deserailization callback. + * prefetched entries), must be transferred to the new cache + * entry returned by the deserialization callback. * * Finally, if the prefetched entry is a flush dependency child, * this flush dependency must be destroyed prior to the @@ -1737,7 +1737,7 @@ typedef struct H5C_cache_entry_t { * The flush dependency height of any entry involved in a * flush dependency relationship is defined to be the * longest flush dependency path from that entry to an entry - * with no flush depenency children. + * with no flush dependency children. * * Since the image_fd_height is used to order entries in the * cache image so that fd parents preceed fd children, for @@ -1946,7 +1946,7 @@ typedef struct H5C_image_entry_t { * * flash_incr_mode: Instance of the H5C_cache_flash_incr_mode enumerated * type whose value indicates whether and by what algorithm we should - * make flash increases in the size of the cache to accomodate insertion + * make flash increases in the size of the cache to accommodate insertion * of large entries and large increases in the size of a single entry. * * The addition of the flash increment mode was occasioned by performance @@ -2182,9 +2182,9 @@ typedef struct H5C_auto_size_ctl_t { * current value, any value in excess of 255 will be the functional * equivalent of H5AC__CACHE_IMAGE__ENTRY_AGEOUT__NONE. * - * flags: Unsigned integer containing flags controling which aspects of the + * flags: Unsigned integer containing flags controlling which aspects of the * cache image functinality is actually executed. The primary impetus - * behind this field is to allow developement of tests for partial + * behind this field is to allow development of tests for partial * implementations that will require little if any modification to run * with the full implementation. In normal operation, all flags should * be set. diff --git a/src/H5Dbtree2.c b/src/H5Dbtree2.c index f9074be..d60e79e 100644 --- a/src/H5Dbtree2.c +++ b/src/H5Dbtree2.c @@ -378,7 +378,7 @@ H5D__bt2_unfilt_encode(uint8_t *raw, const void *_record, void *_ctx) { H5D_bt2_ctx_t *ctx = (H5D_bt2_ctx_t *)_ctx; /* Callback context structure */ const H5D_chunk_rec_t *record = (const H5D_chunk_rec_t *)_record; /* The native record */ - unsigned u; /* Local index varible */ + unsigned u; /* Local index variable */ FUNC_ENTER_STATIC_NOERR diff --git a/src/H5Dchunk.c b/src/H5Dchunk.c index 7216c49..e3f6410 100644 --- a/src/H5Dchunk.c +++ b/src/H5Dchunk.c @@ -695,7 +695,7 @@ H5D__chunk_set_info_real(H5O_layout_chunk_t *layout, unsigned ndims, /* Compute the # of chunks in dataset dimensions */ for(u = 0, layout->nchunks = 1, layout->max_nchunks = 1; u < ndims; u++) { - /* Round up to the next integer # of chunks, to accomodate partial chunks */ + /* Round up to the next integer # of chunks, to accommodate partial chunks */ layout->chunks[u] = ((curr_dims[u] + layout->dim[u]) - 1) / layout->dim[u]; if(H5S_UNLIMITED == max_dims[u]) layout->max_chunks[u] = H5S_UNLIMITED; @@ -3016,7 +3016,7 @@ H5D__chunk_flush_entry(const H5D_t *dset, H5D_rdcc_ent_t *ent, hbool_t reset) } /* end if */ else { /* - * If we are reseting and something goes wrong after this + * If we are resetting and something goes wrong after this * point then it's too late to recover because we may have * destroyed the original data by calling H5Z_pipeline(). * The only safe option is to continue with the reset @@ -4449,7 +4449,7 @@ H5D__chunk_update_old_edge_chunks(H5D_t *dset, hsize_t old_dim[]) /* Start off with this dimension marked as not needing to be modified */ new_full_dim[op_dim] = FALSE; - /* Calulate offset of first previously incomplete chunk in this + /* Calculate offset of first previously incomplete chunk in this * dimension */ old_edge_chunk_sc[op_dim] = (old_dim[op_dim] / chunk_dim[op_dim]); @@ -4970,7 +4970,7 @@ H5D__chunk_prune_by_extent(H5D_t *dset, const hsize_t *old_dim) HGOTO_DONE(SUCCEED) } /* end if */ - /* Round up to the next integer # of chunks, to accomodate partial chunks */ + /* Round up to the next integer # of chunks, to accommodate partial chunks */ /* Use current dims because the indices have already been updated! -NAF */ /* (also compute the number of elements per chunk) */ /* (also copy the chunk dimensions into 'hsize_t' array for creating dataspace) */ diff --git a/src/H5Dint.c b/src/H5Dint.c index b9d9cce..2f67226 100644 --- a/src/H5Dint.c +++ b/src/H5Dint.c @@ -604,7 +604,7 @@ H5D__cache_dataspace_info(const H5D_t *dset) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't cache dataspace dimensions") dset->shared->ndims = (unsigned)sndims; - /* Compute the inital 'power2up' values */ + /* Compute the initial 'power2up' values */ for(u = 0; u < dset->shared->ndims; u++) { hsize_t scaled_power2up; /* Scaled value, rounded to next power of 2 */ @@ -782,7 +782,7 @@ H5D__update_oh_info(H5F_t *file, H5D_t *dset, hid_t dapl_id) H5O_fill_t old_fill_prop; /* Copy of fill value property, for writing as "old" fill value */ /* Shallow copy the fill value property */ - /* (we only want to make certain that the shared component isnt' modified) */ + /* (we only want to make certain that the shared component isn't modified) */ HDmemcpy(&old_fill_prop, fill_prop, sizeof(old_fill_prop)); /* Reset shared component info */ diff --git a/src/H5Dmpio.c b/src/H5Dmpio.c index 107b751..bc37840 100644 --- a/src/H5Dmpio.c +++ b/src/H5Dmpio.c @@ -706,7 +706,7 @@ H5D__chunk_collective_io(H5D_io_info_t *io_info, const H5D_type_info_t *type_inf io_option = H5D_MULTI_CHUNK_IO; /* via default path. branch by num threshold */ else { - unsigned one_link_chunk_io_threshold; /* Threshhold to use single collective I/O for all chunks */ + unsigned one_link_chunk_io_threshold; /* Threshold to use single collective I/O for all chunks */ int mpi_size; /* Number of processes in MPI job */ if(H5D__mpio_get_sum_chunk(io_info, fm, &sum_chunk) < 0) @@ -2765,7 +2765,7 @@ H5D__chunk_redistribute_shared_chunks(const H5D_io_info_t *io_info, const H5D_ty if (H5S_encode(chunk_info->fspace, &mod_data_p, &mod_data_size) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTENCODE, FAIL, "unable to encode dataspace") - /* Intialize iterator for memory selection */ + /* Initialize iterator for memory selection */ if (H5S_select_iter_init(mem_iter, chunk_info->mspace, type_info->src_type_size) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "unable to initialize memory selection information") mem_iter_init = TRUE; diff --git a/src/H5Dvirtual.c b/src/H5Dvirtual.c index c7c0775..7f1ac86 100644 --- a/src/H5Dvirtual.c +++ b/src/H5Dvirtual.c @@ -796,7 +796,7 @@ H5D__virtual_copy(H5F_t *f_dst, H5O_layout_t *layout_dst) if(f_dst == f_src) { /* Increase reference count on global heap object */ if((heap_rc = H5HG_link(f_dst, (H5HG_t *)&(layout_dst->u.virt.serial_list_hobjid), 1)) < 0) - HGOTO_ERROR(H5E_DATASET, H5E_CANTMODIFY, FAIL, "unable to adjust global heap refence count") + HGOTO_ERROR(H5E_DATASET, H5E_CANTMODIFY, FAIL, "unable to adjust global heap reference count") } /* end if */ else #endif /* NOT_YET */ @@ -847,7 +847,7 @@ H5D__virtual_delete(H5F_t *f, H5O_storage_t *storage) #ifdef NOT_YET /* Unlink the global heap block */ if((heap_rc = H5HG_link(f, (H5HG_t *)&(storage->u.virt.serial_list_hobjid), -1)) < 0) - HGOTO_ERROR(H5E_DATASET, H5E_CANTMODIFY, FAIL, "unable to adjust global heap refence count") + HGOTO_ERROR(H5E_DATASET, H5E_CANTMODIFY, FAIL, "unable to adjust global heap reference count") if(heap_rc == 0) #endif /* NOT_YET */ /* Delete the global heap block */ diff --git a/src/H5Edeprec.c b/src/H5Edeprec.c index 9ff9f1f..fc3eb9c 100644 --- a/src/H5Edeprec.c +++ b/src/H5Edeprec.c @@ -227,7 +227,7 @@ done: /*------------------------------------------------------------------------- * Function: H5Eclear1 * - * Purpose: This function is for backward compatbility. + * Purpose: This function is for backward compatibility. * Clears the error stack for the specified error stack. * * Return: Non-negative on success/Negative on failure @@ -258,7 +258,7 @@ done: /*------------------------------------------------------------------------- * Function: H5Eprint1 * - * Purpose: This function is for backward compatbility. + * Purpose: This function is for backward compatibility. * Prints the error stack in some default way. This is just a * convenience function for H5Ewalk() with a function that * prints error messages. Users are encouraged to write there @@ -296,7 +296,7 @@ done: /*------------------------------------------------------------------------- * Function: H5Ewalk1 * - * Purpose: This function is for backward compatbility. + * Purpose: This function is for backward compatibility. * Walks the error stack for the current thread and calls some * function for each error along the way. * @@ -335,7 +335,7 @@ done: /*------------------------------------------------------------------------- * Function: H5Eget_auto1 * - * Purpose: This function is for backward compatbility. + * Purpose: This function is for backward compatibility. * Returns the current settings for the automatic error stack * traversal function and its data for specific error stack. * Either (or both) arguments may be null in which case the @@ -386,7 +386,7 @@ done: /*------------------------------------------------------------------------- * Function: H5Eset_auto1 * - * Purpose: This function is for backward compatbility. + * Purpose: This function is for backward compatibility. * Turns on or off automatic printing of errors for certain * error stack. When turned on (non-null FUNC pointer) any * API function which returns an error indication will first diff --git a/src/H5FDdirect.c b/src/H5FDdirect.c index 811ea8e..906ec28 100644 --- a/src/H5FDdirect.c +++ b/src/H5FDdirect.c @@ -951,7 +951,7 @@ H5FD_direct_read(H5FD_t *_file, H5FD_mem_t H5_ATTR_UNUSED type, hid_t H5_ATTR_UN do { /* Read the aligned data in file first. Not able to handle interrupted * system calls and partial results like sec2 driver does because the - * data may no longer be aligned. It's expecially true when the data in + * data may no longer be aligned. It's especially true when the data in * file is smaller than ALLOC_SIZE. */ HDmemset(copy_buf, 0, alloc_size); @@ -1138,9 +1138,9 @@ H5FD_direct_write(H5FD_t *_file, H5FD_mem_t H5_ATTR_UNUSED type, hid_t H5_ATTR_U /* * Read the aligned data first if the aligned region doesn't fall - * entirely in the range to be writen. Not able to handle interrupted + * entirely in the range to be written. Not able to handle interrupted * system calls and partial results like sec2 driver does because the - * data may no longer be aligned. It's expecially true when the data in + * data may no longer be aligned. It's especially true when the data in * file is smaller than ALLOC_SIZE. Only read the entire section if * both ends are misaligned, otherwise only read the block on the * misaligned end. diff --git a/src/H5FDfamily.c b/src/H5FDfamily.c index 3c1c7bb..e52a71a 100644 --- a/src/H5FDfamily.c +++ b/src/H5FDfamily.c @@ -548,7 +548,7 @@ H5FD_family_sb_encode(H5FD_t *_file, char *name/*out*/, unsigned char *buf/*out* /*------------------------------------------------------------------------- * Function: H5FD_family_sb_decode * - * Purpose: This function has 2 seperate purpose. One is to decodes the + * Purpose: This function has 2 separate purpose. One is to decodes the * superblock information for this driver. The NAME argument is * the eight-character (plus null termination) name stored in i * the file. The FILE argument is updated according to the diff --git a/src/H5FDmpio.c b/src/H5FDmpio.c index ee3277d..87f8b6a 100644 --- a/src/H5FDmpio.c +++ b/src/H5FDmpio.c @@ -1462,7 +1462,7 @@ H5FD_mpio_read(H5FD_t *_file, H5FD_mem_t H5_ATTR_UNUSED type, /* Only look for MPI views for raw data transfers */ if(type == H5FD_MEM_DRAW) { - H5FD_mpio_xfer_t xfer_mode; /* I/O tranfer mode */ + H5FD_mpio_xfer_t xfer_mode; /* I/O transfer mode */ /* Get the transfer mode from the API context */ if(H5CX_get_io_xfer_mode(&xfer_mode) < 0) @@ -1717,7 +1717,7 @@ H5FD_mpio_write(H5FD_t *_file, H5FD_mem_t type, hid_t H5_ATTR_UNUSED dxpl_id, #endif int size_i; hbool_t use_view_this_time = FALSE; - H5FD_mpio_xfer_t xfer_mode; /* I/O tranfer mode */ + H5FD_mpio_xfer_t xfer_mode; /* I/O transfer mode */ herr_t ret_value = SUCCEED; FUNC_ENTER_NOAPI_NOINIT diff --git a/src/H5FDmulti.c b/src/H5FDmulti.c index 8ae23d2..aa1b118 100644 --- a/src/H5FDmulti.c +++ b/src/H5FDmulti.c @@ -263,7 +263,7 @@ H5FD_multi_term(void) /*------------------------------------------------------------------------- * Function: H5Pset_fapl_split * - * Purpose: Compatability function. Makes the multi driver act like the + * Purpose: Compatibility function. Makes the multi driver act like the * old split driver which stored meta data in one file and raw * data in another file. * @@ -18,7 +18,7 @@ * Purpose: Manage priority queues of free-lists (of blocks of bytes). * These are used in various places in the library which allocate and * free differently blocks of bytes repeatedly. Usually the same size - * of block is allocated and freed repeatly in a loop, while writing out + * of block is allocated and freed repeatedly in a loop, while writing out * chunked data for example, but the blocks may also be of different sizes * from different datasets and an attempt is made to optimize access to * the proper free list of blocks by using these priority queues to @@ -499,7 +499,7 @@ H5FL_reg_calloc(H5FL_reg_head_t *head H5FL_TRACK_PARAMS) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed") /* Clear to zeros */ - /* (Accomodate tracking information, if present) */ + /* (Accommodate tracking information, if present) */ HDmemset(ret_value,0,head->size - H5FL_TRACK_SIZE); done: @@ -2220,7 +2220,7 @@ H5FL_fac_calloc(H5FL_fac_head_t *head H5FL_TRACK_PARAMS) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed") /* Clear to zeros */ - /* (Accomodate tracking information, if present) */ + /* (Accommodate tracking information, if present) */ HDmemset(ret_value,0,head->size - H5FL_TRACK_SIZE); done: @@ -135,7 +135,7 @@ HDfprintf(stderr, "%s: Creating free space manager, nclasses = %Zu\n", FUNC, ncl fspace->alignment = alignment; fspace->align_thres = threshold; - /* Check if the free space tracker is supposed to be persistant */ + /* Check if the free space tracker is supposed to be persistent */ if(fs_addr) { /* Allocate space for the free space header */ if(HADDR_UNDEF == (fspace->addr = H5MF_alloc(f, H5FD_MEM_FSPACE_HDR, (hsize_t)fspace->hdr_size))) @@ -423,7 +423,7 @@ HDfprintf(stderr, "%s: fspace->tot_sect_count = %Hu, fspace->serial_sect_count = HDfprintf(stderr, "%s: fspace->alloc_sect_size = %Hu, fspace->sect_size = %Hu\n", FUNC, fspace->alloc_sect_size, fspace->sect_size); #endif /* H5FS_DEBUG */ /* If there are sections to serialize, update them */ - /* (if the free space manager is persistant) */ + /* (if the free space manager is persistent) */ if(fspace->serial_sect_count > 0 && H5F_addr_defined(fspace->addr)) { #ifdef H5FS_DEBUG HDfprintf(stderr, "%s: Real sections to store in file\n", FUNC); @@ -794,7 +794,7 @@ HDfprintf(stderr, "%s: Marking free space header as dirty\n", FUNC); /* Sanity check */ HDassert(fspace); - /* Check if the free space manager is persistant */ + /* Check if the free space manager is persistent */ if(H5F_addr_defined(fspace->addr)) /* Mark header as dirty in cache */ if(H5AC_mark_entry_dirty(fspace) < 0) @@ -883,7 +883,7 @@ H5FS_alloc_sect(H5F_t *f, H5FS_t *fspace) HGOTO_ERROR(H5E_FSPACE, H5E_CANTINIT, FAIL, "can't add free space sections to cache") /* Since space has been allocated for the section info and the sinfo - * has been inserted into the cache, relinquish owership (i.e. float) + * has been inserted into the cache, relinquish ownership (i.e. float) * the section info. */ fspace->sinfo = NULL; diff --git a/src/H5FScache.c b/src/H5FScache.c index 875a383..fa04ba1 100644 --- a/src/H5FScache.c +++ b/src/H5FScache.c @@ -457,7 +457,7 @@ H5FS__cache_hdr_pre_serialize(H5F_t *f, void *_thing, * H5F_addr_defined(fspace->addr) * * will both be TRUE. If this contition does not hold, then - * either the free space info is not persistant + * either the free space info is not persistent * (!H5F_addr_defined(fspace->addr)???) or the section info * contains no free space data that must be written to file * ( fspace->serial_sect_count == 0 ). @@ -487,7 +487,7 @@ H5FS__cache_hdr_pre_serialize(H5F_t *f, void *_thing, * * Case 1) If either fspace->serial_sect_count == 0 or * ! H5F_addr_defined(fspace->addr) do nothing as either - * the free space manager data is not persistant, or the + * the free space manager data is not persistent, or the * section info is empty. * * Otherwise, allocate space for the section info in real @@ -1454,7 +1454,7 @@ H5FS__sinfo_serialize_sect_cb(void *_item, void H5_ATTR_UNUSED *key, void *_udat /* Call 'serialize' callback for this section */ if(sect_cls->serialize) { if((*sect_cls->serialize)(sect_cls, sect, *udata->image) < 0) - HGOTO_ERROR(H5E_FSPACE, H5E_CANTSERIALIZE, FAIL, "can't syncronize section") + HGOTO_ERROR(H5E_FSPACE, H5E_CANTSERIALIZE, FAIL, "can't synchronize section") /* Update offset in serialization buffer */ (*udata->image) += sect_cls->serial_size; diff --git a/src/H5FSsection.c b/src/H5FSsection.c index 11cd722..a58347f 100644 --- a/src/H5FSsection.c +++ b/src/H5FSsection.c @@ -2432,7 +2432,7 @@ done: * returns to 1) above. * * Similarly, if it allocates space for its own header, it - * can go into an infinte loop as it: + * can go into an infinite loop as it: * * 1) allocates space for the header * @@ -2479,7 +2479,7 @@ done: * enabled when the free space managers are read. To allow * for this, we must ensure that space allocated for the * free space manager header and section info is either larger - * than a page, or resides completely withing a page. + * than a page, or resides completely within a page. * * Do this by allocating space for the free space header and * section info starting at page boundaries, and extending @@ -2532,7 +2532,7 @@ H5FS_vfd_alloc_hdr_and_section_info_if_needed(H5F_t *f, H5FS_t *fspace, HDassert(fspace->sect_addr == HADDR_UNDEF); HDassert(fspace->alloc_sect_size == 0); - /* persistant free space managers must be enabled */ + /* persistent free space managers must be enabled */ HDassert(f->shared->fs_persist); /* At present, all free space strategies enable the free space managers. @@ -2576,7 +2576,7 @@ H5FS_vfd_alloc_hdr_and_section_info_if_needed(H5F_t *f, H5FS_t *fspace, f, hdr_alloc_size, &eoa_frag_addr, &eoa_frag_size))) HGOTO_ERROR(H5E_FSPACE, H5E_CANTALLOC, FAIL, "can't allocate file space for hdr") - /* if the file alignement is 1, there should be no + /* if the file alignment is 1, there should be no * eoa fragment. Otherwise, drop any fragment on the floor. */ HDassert((eoa_frag_size == 0) || (f->shared->alignment != 1)); @@ -2616,7 +2616,7 @@ H5FS_vfd_alloc_hdr_and_section_info_if_needed(H5F_t *f, H5FS_t *fspace, f, sinfo_alloc_size, &eoa_frag_addr, &eoa_frag_size))) HGOTO_ERROR(H5E_FSPACE, H5E_CANTALLOC, FAIL, "can't allocate file space") - /* if the file alignement is 1, there should be no + /* if the file alignment is 1, there should be no * eoa fragment. Otherwise, drop the fragment on the floor. */ HDassert((eoa_frag_size == 0) || (f->shared->alignment != 1)); @@ -2637,7 +2637,7 @@ H5FS_vfd_alloc_hdr_and_section_info_if_needed(H5F_t *f, H5FS_t *fspace, * On reflection, no. * * On a regular file close, any eviction will not change the - * the contents of the free space manger(s), as all entries + * the contents of the free space manager(s), as all entries * should have correct file space allocated by the time this * function is called. * @@ -2658,7 +2658,7 @@ H5FS_vfd_alloc_hdr_and_section_info_if_needed(H5F_t *f, H5FS_t *fspace, HGOTO_ERROR(H5E_FSPACE, H5E_CANTMARKDIRTY, FAIL, "unable to mark free space header as dirty") /* since space has been allocated for the section info and the sinfo - * has been inserted into the cache, relinquish owership (i.e. float) + * has been inserted into the cache, relinquish ownership (i.e. float) * the section info. */ fspace->sinfo = NULL; diff --git a/src/H5Fpkg.h b/src/H5Fpkg.h index f815005..2ab41de 100644 --- a/src/H5Fpkg.h +++ b/src/H5Fpkg.h @@ -321,7 +321,7 @@ struct H5F_file_t { haddr_t fs_addr[H5F_MEM_PAGE_NTYPES]; /* Address of free space manager info for each type */ H5FS_t *fs_man[H5F_MEM_PAGE_NTYPES]; /* Free space manager for each file space type */ hbool_t first_alloc_dealloc; /* TRUE iff free space managers */ - /* are persistant and have not */ + /* are persistent and have not */ /* been used accessed for either */ /* allocation or deallocation */ /* since file open. */ diff --git a/src/H5Fprivate.h b/src/H5Fprivate.h index f06d4d0..979ba7d 100644 --- a/src/H5Fprivate.h +++ b/src/H5Fprivate.h @@ -557,7 +557,7 @@ typedef struct H5F_t H5F_t; #define H5F_FILE_SPACE_PAGE_SIZE_DEF 4096 /* For paged aggregation: minimum value for file space page size */ #define H5F_FILE_SPACE_PAGE_SIZE_MIN 512 -/* For paged aggregation: maxiumum value for file space page size: 1 gigabyte */ +/* For paged aggregation: maximum value for file space page size: 1 gigabyte */ #define H5F_FILE_SPACE_PAGE_SIZE_MAX 1024*1024*1024 /* For paged aggregation: drop free-space with size <= this threshold for small meta section */ diff --git a/src/H5Fsuper.c b/src/H5Fsuper.c index 97a6d6f..9339b3d 100644 --- a/src/H5Fsuper.c +++ b/src/H5Fsuper.c @@ -823,13 +823,13 @@ H5F__super_read(H5F_t *f, H5P_genplist_t *fa_plist, hbool_t initial_read) f->shared->eoa_pre_fsm_fsalloc = fsinfo.eoa_pre_fsm_fsalloc; /* f->shared->eoa_pre_fsm_fsalloc must always be HADDR_UNDEF - * in the absence of persistant free space managers. + * in the absence of persistent free space managers. */ /* If the following two conditions are true: * (1) skipping EOF check (skip_eof_check) * (2) dropping free-space to the floor (null_fsm_addr) * skip the asserts as "eoa_pre_fsm_fsalloc" may be undefined - * for a crashed file with persistant free space managers. + * for a crashed file with persistent free space managers. * #1 and #2 are enabled when the tool h5clear --increment * option is used. */ @@ -839,7 +839,7 @@ H5F__super_read(H5F_t *f, H5P_genplist_t *fa_plist, hbool_t initial_read) } /* end if */ /* As "eoa_pre_fsm_fsalloc" may be undefined for a crashed file - * with persistant free space managers, therefore, set + * with persistent free space managers, therefore, set * "first_alloc_dealloc" when the condition * "dropping free-space to the floor is true. * This will ensure that no action is done to settle things on file diff --git a/src/H5Gname.c b/src/H5Gname.c index 1ca06b9..c1156ca 100644 --- a/src/H5Gname.c +++ b/src/H5Gname.c @@ -1058,7 +1058,7 @@ done: * Function: H5G_name_replace * * Purpose: Search the list of open IDs and replace names according to a - * particular operation. The operation occured on the + * particular operation. The operation occurred on the * SRC_FILE/SRC_FULL_PATH_R object. The new name (if there is * one) is NEW_NAME_R. Additional entry location information * (currently only needed for the 'move' operation) is passed in diff --git a/src/H5Gobj.c b/src/H5Gobj.c index af0e72c..e93896c 100644 --- a/src/H5Gobj.c +++ b/src/H5Gobj.c @@ -222,7 +222,7 @@ H5G__obj_create_real(H5F_t *f, const H5O_ginfo_t *ginfo, size_t pline_size = 0; /* Size of the pipeline message */ size_t link_size; /* Size of a link message */ - /* Calculate message size infomation, for creating group's object header */ + /* Calculate message size information, for creating group's object header */ linfo_size = H5O_msg_size_f(f, gcpl_id, H5O_LINFO_ID, linfo, (size_t)0); HDassert(linfo_size); diff --git a/src/H5HFcache.c b/src/H5HFcache.c index 84d5c5f..0c5d3aa 100644 --- a/src/H5HFcache.c +++ b/src/H5HFcache.c @@ -702,12 +702,12 @@ H5HF__cache_hdr_pre_serialize(H5F_t *f, void *_thing, haddr_t addr, size_t len, * * Do this with a call to H5HF__cache_verify_hdr_descendants_clean(). * - * Note that decendants need not be clean if the pre_serialize call + * Note that descendants need not be clean if the pre_serialize call * is made during a cache serialization instead of an entry or cache * flush. * * Note also that with the recent change in the definition of flush - * dependency, not all decendants need be clean -- only direct flush + * dependency, not all descendants need be clean -- only direct flush * dependency children. * * Finally, observe that the H5HF__cache_verify_hdr_descendants_clean() @@ -2643,11 +2643,11 @@ H5HF__cache_dblock_fsf_size(const void *_thing, hsize_t *fsf_size) * * The implementation of flush dependencies has been changed. * Prior to this change, a flush dependency parent could be - * flushed if and only if all its flush dependency decendants + * flushed if and only if all its flush dependency descendants * were clean. In the new definition, a flush dependency * parent can be flushed if all its immediate flush dependency * children are clean, regardless of any other dirty - * decendants. + * descendants. * * Further, metadata cache entries are now allowed to have * multiple flush dependency parents. @@ -2815,7 +2815,7 @@ H5HF__cache_verify_hdr_descendants_clean(H5F_t *f, H5HF_hdr_t *hdr, H5_BEGIN_TAG(hdr->heap_addr) if(NULL == (root_iblock = (H5HF_indirect_t *)H5AC_protect(f, H5AC_FHEAP_IBLOCK, root_iblock_addr, NULL, H5AC__READ_ONLY_FLAG))) - HGOTO_ERROR_TAG(H5E_HEAP, H5E_CANTPROTECT, FAIL, "H5AC_protect() faild.") + HGOTO_ERROR_TAG(H5E_HEAP, H5E_CANTPROTECT, FAIL, "H5AC_protect() failed.") H5_END_TAG @@ -2889,7 +2889,7 @@ H5HF__cache_verify_hdr_descendants_clean(H5F_t *f, H5HF_hdr_t *hdr, H5_BEGIN_TAG(hdr->heap_addr) if(NULL == (iblock = (H5HF_indirect_t *)H5AC_protect(f, H5AC_FHEAP_IBLOCK, root_iblock_addr, NULL, H5AC__READ_ONLY_FLAG))) - HGOTO_ERROR_TAG(H5E_HEAP, H5E_CANTPROTECT, FAIL, "H5AC_protect() faild.") + HGOTO_ERROR_TAG(H5E_HEAP, H5E_CANTPROTECT, FAIL, "H5AC_protect() failed.") H5_END_TAG @@ -2912,7 +2912,7 @@ H5HF__cache_verify_hdr_descendants_clean(H5F_t *f, H5HF_hdr_t *hdr, if(unprotect_root_iblock) { HDassert(root_iblock); if(H5AC_unprotect(f, H5AC_FHEAP_IBLOCK, root_iblock_addr, root_iblock, H5AC__NO_FLAGS_SET) < 0) - HGOTO_ERROR(H5E_HEAP, H5E_CANTUNPROTECT, FAIL, "H5AC_unprotect() faild.") + HGOTO_ERROR(H5E_HEAP, H5E_CANTUNPROTECT, FAIL, "H5AC_unprotect() failed.") } /* end if */ } /* end else */ } /* end if */ @@ -2982,7 +2982,7 @@ done: * Function: H5HF__cache_verify_iblock_descendants_clean * * Purpose: Sanity checking routine that verifies that all indirect - * and direct blocks that are decendents of the supplied + * and direct blocks that are descendants of the supplied * instance of H5HF_indirect_t are clean. Set *clean * to TRUE if this is the case, and to FALSE otherwise. * @@ -3009,11 +3009,11 @@ done: * * The implementation of flush dependencies has been changed. * Prior to this change, a flush dependency parent could be - * flushed if and only if all its flush dependency decendants + * flushed if and only if all its flush dependency descendants * were clean. In the new definition, a flush dependency * parent can be flushed if all its immediate flush dependency * children are clean, regardless of any other dirty - * decendants. + * descendants. * * Further, metadata cache entries are now allowed to have * multiple flush dependency parents. @@ -3126,11 +3126,11 @@ done: * * The implementation of flush dependencies has been changed. * Prior to this change, a flush dependency parent could be - * flushed if and only if all its flush dependency decendants + * flushed if and only if all its flush dependency descendants * were clean. In the new definition, a flush dependency * parent can be flushed if all its immediate flush dependency * children are clean, regardless of any other dirty - * decendants. + * descendants. * * Further, metadata cache entries are now allowed to have * multiple flush dependency parents. @@ -3290,11 +3290,11 @@ done: * * The implementation of flush dependencies has been changed. * Prior to this change, a flush dependency parent could be - * flushed if and only if all its flush dependency decendants + * flushed if and only if all its flush dependency descendants * were clean. In the new definition, a flush dependency * parent can be flushed if all its immediate flush dependency * children are clean, regardless of any other dirty - * decendants. + * descendants. * * Further, metadata cache entries are now allowed to have * multiple flush dependency parents. @@ -3468,7 +3468,7 @@ H5HF__cache_verify_descendant_iblocks_clean(H5F_t *f, haddr_t fd_parent_addr, H5_BEGIN_TAG(iblock->hdr->heap_addr) if(NULL == (child_iblock = (H5HF_indirect_t *) H5AC_protect(f, H5AC_FHEAP_IBLOCK, child_iblock_addr, NULL, H5AC__READ_ONLY_FLAG))) - HGOTO_ERROR_TAG(H5E_HEAP, H5E_CANTPROTECT, FAIL, "H5AC_protect() faild.") + HGOTO_ERROR_TAG(H5E_HEAP, H5E_CANTPROTECT, FAIL, "H5AC_protect() failed.") H5_END_TAG @@ -3480,7 +3480,7 @@ H5HF__cache_verify_descendant_iblocks_clean(H5F_t *f, haddr_t fd_parent_addr, /* pointer to the entry. This is very slimy -- */ /* come up with a better solution. */ if(H5AC_get_entry_ptr_from_addr(f, child_iblock_addr, (void **)(&child_iblock)) < 0) - HGOTO_ERROR(H5E_HEAP, H5E_CANTGET, FAIL, "H5AC_get_entry_ptr_from_addr() faild.") + HGOTO_ERROR(H5E_HEAP, H5E_CANTGET, FAIL, "H5AC_get_entry_ptr_from_addr() failed.") HDassert(child_iblock); } /* end else */ } /* end if */ @@ -3519,7 +3519,7 @@ H5HF__cache_verify_descendant_iblocks_clean(H5F_t *f, haddr_t fd_parent_addr, /* if we protected the child iblock, unprotect it now */ if(unprotect_child_iblock) { if(H5AC_unprotect(f, H5AC_FHEAP_IBLOCK, child_iblock_addr, child_iblock, H5AC__NO_FLAGS_SET) < 0) - HGOTO_ERROR(H5E_HEAP, H5E_CANTUNPROTECT, FAIL, "H5AC_unprotect() faild.") + HGOTO_ERROR(H5E_HEAP, H5E_CANTUNPROTECT, FAIL, "H5AC_unprotect() failed.") } /* end if */ } /* end if */ } /* end if */ diff --git a/src/H5HFdtable.c b/src/H5HFdtable.c index 563e8c5..6e9429a 100644 --- a/src/H5HFdtable.c +++ b/src/H5HFdtable.c @@ -338,7 +338,7 @@ HDfprintf(stderr, "%s: end_row = %u, end_col = %u, end_entry = %u\n", "H5HF_sect /* Check for multi-row span */ if(start_row != end_row) { - /* Accomodate partial starting row */ + /* Accommodate partial starting row */ if(start_col > 0) { acc_span_size = dtable->row_block_size[start_row] * (dtable->cparam.width - start_col); @@ -352,7 +352,7 @@ HDfprintf(stderr, "%s: end_row = %u, end_col = %u, end_entry = %u\n", "H5HF_sect start_row++; } /* end while */ - /* Accomodate partial ending row */ + /* Accommodate partial ending row */ acc_span_size += dtable->row_block_size[start_row] * (end_col + 1); } /* end if */ diff --git a/src/H5HFhdr.c b/src/H5HFhdr.c index b1b8574..8166d88 100644 --- a/src/H5HFhdr.c +++ b/src/H5HFhdr.c @@ -46,13 +46,13 @@ /* Limit on the size of the max. direct block size */ /* (This is limited to 32-bits currently, because I think it's unlikely to * need to be larger, the 32-bit limit for H5VM_log2_of2(n), and - * some offsets/sizes are encoded with a maxiumum of 32-bits - QAK) + * some offsets/sizes are encoded with a maximum of 32-bits - QAK) */ #define H5HF_MAX_DIRECT_SIZE_LIMIT ((hsize_t)2 * 1024 * 1024 * 1024) /* Limit on the width of the doubling table */ /* (This is limited to 16-bits currently, because I think it's unlikely to - * need to be larger, and its encoded with a maxiumum of 16-bits - QAK) + * need to be larger, and its encoded with a maximum of 16-bits - QAK) */ #define H5HF_WIDTH_LIMIT (64 * 1024) #endif /* NDEBUG */ diff --git a/src/H5HFspace.c b/src/H5HFspace.c index 5d659a6..5260ae2 100644 --- a/src/H5HFspace.c +++ b/src/H5HFspace.c @@ -311,7 +311,7 @@ H5HF__space_revert_root(const H5HF_hdr_t *hdr) /* Only need to scan the sections if the free space has been initialized */ if(hdr->fspace) - /* Iterate over all sections, reseting the parent pointers in 'single' sections */ + /* Iterate over all sections, resetting the parent pointers in 'single' sections */ if(H5FS_sect_iterate(hdr->f, hdr->fspace, H5HF_space_revert_root_cb, NULL) < 0) HGOTO_ERROR(H5E_FSPACE, H5E_BADITER, FAIL, "can't iterate over sections to reset parent pointers") diff --git a/src/H5HFtiny.c b/src/H5HFtiny.c index 79462e9..5cf1c08 100644 --- a/src/H5HFtiny.c +++ b/src/H5HFtiny.c @@ -109,7 +109,7 @@ H5HF_tiny_init(H5HF_hdr_t *hdr) /* Check if tiny objects need an extra byte for their length */ /* (account for boundary condition when length of an object would need an * extra byte, but using that byte means that the extra length byte is - * unneccessary) + * unnecessary) */ if((hdr->id_len - 1) <= H5HF_TINY_LEN_SHORT) { hdr->tiny_max_len = hdr->id_len - 1; diff --git a/src/H5HGcache.c b/src/H5HGcache.c index 50b2669..3a770ae 100644 --- a/src/H5HGcache.c +++ b/src/H5HGcache.c @@ -300,7 +300,7 @@ H5HG__cache_heap_deserialize(const void *_image, size_t len, void *_udata, image += heap->obj[0].size; } /* end if */ else { - size_t need; + size_t need = 0; unsigned idx; uint8_t *begin = image; @@ -420,7 +420,7 @@ H5HG__cache_heap_image_len(const void *_thing, size_t *image_len) * * Purpose: Given an appropriately sized buffer and an instance of * H5HG_heap_t, serialize the global heap for writing to file, - * and copy the serialized verion into the buffer. + * and copy the serialized version into the buffer. * * * Return: Success: SUCCEED @@ -1692,7 +1692,7 @@ HDfprintf(stderr, "%s: Entering\n", FUNC); } /* end if */ /* Set the ring type in the API context. In most cases, we will - * need H5AC_RING_RDFSM, so initialy set the ring in + * need H5AC_RING_RDFSM, so initially set the ring in * the context to that value. We will alter this later if needed. */ H5AC_set_ring(H5AC_RING_RDFSM, &orig_ring); @@ -1788,7 +1788,7 @@ HDfprintf(stderr, "%s: Entering\n", FUNC); HDassert(f->shared->sblock); /* Set the ring type in the API context. In most cases, we will - * need H5AC_RING_RDFSM, so initialy set the ring in + * need H5AC_RING_RDFSM, so initially set the ring in * the context to that value. We will alter this later if needed. */ H5AC_set_ring(H5AC_RING_RDFSM, &orig_ring); @@ -1956,7 +1956,7 @@ HDfprintf(stderr, "%s: Entering\n", FUNC); HDassert(f->shared->sblock->super_vers >= HDF5_SUPERBLOCK_VERSION_2); /* Set the ring type in the API context. In most cases, we will - * need H5AC_RING_RDFSM, so initialy set the ring in + * need H5AC_RING_RDFSM, so initially set the ring in * the context to that value. We will alter this later if needed. */ H5AC_set_ring(H5AC_RING_RDFSM, &orig_ring); @@ -2244,7 +2244,7 @@ H5MF_get_freespace(H5F_t *f, hsize_t *tot_space, hsize_t *meta_size) HDassert(f->shared->lf); /* Set the ring type in the API context. In most cases, we will - * need H5AC_RING_RDFSM, so initialy set the ring in + * need H5AC_RING_RDFSM, so initially set the ring in * the context to that value. We will alter this later if needed. */ H5AC_set_ring(H5AC_RING_RDFSM, &orig_ring); @@ -2419,7 +2419,7 @@ H5MF_get_free_sections(H5F_t *f, H5FD_mem_t type, size_t nsects, H5F_sect_info_t sect_udata.sect_idx = 0; /* Set the ring type in the API context. In most cases, we will - * need H5AC_RING_RDFSM, so initialy set the ring in + * need H5AC_RING_RDFSM, so initially set the ring in * the context to that value. We will alter this later if needed. */ H5AC_set_ring(H5AC_RING_RDFSM, &orig_ring); @@ -2712,7 +2712,7 @@ H5MF_settle_raw_data_fsm(H5F_t *f, hbool_t *fsm_settled) HGOTO_ERROR(H5E_RESOURCE, H5E_CANTFREE, FAIL, "can't free aggregators") /* Set the ring type in the DXPL. In most cases, we will - * need H5AC_RING_MDFSM first, so initialy set the ring in + * need H5AC_RING_MDFSM first, so initially set the ring in * the DXPL to that value. We will alter this later if * needed. */ @@ -2829,7 +2829,7 @@ H5MF_settle_raw_data_fsm(H5F_t *f, hbool_t *fsm_settled) * extension messages will choke if the target message is * unexpectedly either absent or present. * - * Update: This is probably unecessary, as I gather that the + * Update: This is probably unnecessary, as I gather that the * file space manager info message is guaranteed to exist. * Leave it in for now, but consider removing it. */ @@ -3083,7 +3083,7 @@ done: * of these free space manager(s) only to have the allocation * result in the free space manager being empty and thus * obliging us to free the space again. Thus there is the - * potential for an infinte loop if we want to avoid saving + * potential for an infinite loop if we want to avoid saving * empty free space managers. * * Similarly, it is possible that we could allocate space @@ -3280,7 +3280,7 @@ H5MF_settle_meta_data_fsm(H5F_t *f, hbool_t *fsm_settled) * extension message. * * As of this writing, we are solving this problem by - * simply not supporting persistant FSMs with the split + * simply not supporting persistent FSMs with the split * and multi file drivers. * * Current plans are to do away with the multi file @@ -3296,7 +3296,7 @@ H5MF_settle_meta_data_fsm(H5F_t *f, hbool_t *fsm_settled) /* ******************* PROBLEM: ******************** * - * If the file has an alignement other than 1, and if + * If the file has an alignment other than 1, and if * the EOA is not a multiple of this alignment, allocating sapce * for the section via the VFD info has the potential of generating * a fragment that will be added to the free space manager. This @@ -3433,7 +3433,7 @@ H5MF__fsm_type_is_self_referential(H5F_t *f, H5F_mem_page_t fsm_type) /* In principle, fsm_type should always be less than * H5F_MEM_PAGE_LARGE_SUPER whenever paged aggregation * is not enabled. However, since there is code that does - * not observe this prinicple, force the result to FALSE if + * not observe this principle, force the result to FALSE if * fsm_type is greater than or equal to H5F_MEM_PAGE_LARGE_SUPER. */ if(fsm_type >= H5F_MEM_PAGE_LARGE_SUPER) diff --git a/src/H5MFaggr.c b/src/H5MFaggr.c index 5ab1834..3db7f73 100644 --- a/src/H5MFaggr.c +++ b/src/H5MFaggr.c @@ -407,7 +407,7 @@ H5MF__aggr_try_extend(H5F_t *f, H5F_blk_aggr_t *aggr, if(f->shared->feature_flags & aggr->feature_flag) { /* * If the block being tested adjoins the beginning of the aggregator - * block, check if the aggregator can accomodate the extension. + * block, check if the aggregator can accommodate the extension. */ if(H5F_addr_eq(blk_end, aggr->addr)) { haddr_t eoa; /* EOA for the file */ @@ -946,7 +946,7 @@ done: * Function: H5Odisable_mdc_flushes * * Purpose: To "cork" an object: - * --keep dirty entries assoicated with the object in the metadata cache + * --keep dirty entries associated with the object in the metadata cache * * Return: Success: Non-negative * Failure: Negative diff --git a/src/H5Oattr.c b/src/H5Oattr.c index f2c31d7..a62a3a3 100644 --- a/src/H5Oattr.c +++ b/src/H5Oattr.c @@ -249,7 +249,7 @@ done: if(NULL == ret_value) if(attr) { if(attr->shared) { - /* Free any dynamicly allocated items */ + /* Free any dynamically allocated items */ if(H5A__free(attr) < 0) HDONE_ERROR(H5E_ATTR, H5E_CANTRELEASE, NULL, "can't release attribute info") diff --git a/src/H5Oattribute.c b/src/H5Oattribute.c index 9d125e8..e8a8433 100644 --- a/src/H5Oattribute.c +++ b/src/H5Oattribute.c @@ -1093,7 +1093,7 @@ H5O_attr_rename_mod_cb(H5O_t *oh, H5O_mesg_t *mesg/*in,out*/, mesg->native = NULL; /* Delete old attribute */ - /* (doesn't decrement the link count on shared components becuase + /* (doesn't decrement the link count on shared components because * the "native" pointer has been reset) */ if(H5O_release_mesg(udata->f, oh, mesg, FALSE) < 0) diff --git a/src/H5Ocache_image.c b/src/H5Ocache_image.c index ad64297..591ac4a 100644 --- a/src/H5Ocache_image.c +++ b/src/H5Ocache_image.c @@ -313,7 +313,7 @@ H5O__mdci_delete(H5F_t *f, H5O_t *open_oh, void *_mesg) * space allocations / deallocations prior to the free of the * cache image. Verify this to the extent possible. * - * If the hack to work around the persistant self referential + * If the hack to work around the persistent self referential * free space manager issue is NOT in use, just call H5MF_xfree() * to release the cache iamge. In principle, we should be able * to just reduce the EOA to the base address of the cache diff --git a/src/H5Ocopy.c b/src/H5Ocopy.c index e6865f1..2e628f4 100644 --- a/src/H5Ocopy.c +++ b/src/H5Ocopy.c @@ -1106,7 +1106,7 @@ H5O__copy_header(const H5O_loc_t *oloc_src, H5O_loc_t *oloc_dst /*out */, HDassert(H5F_addr_defined(oloc_src->addr)); HDassert(oloc_dst->file); - /* Intialize copy info before errors can be thrown */ + /* Initialize copy info before errors can be thrown */ HDmemset(&cpy_info, 0, sizeof(H5O_copy_t)); /* Get the copy property list */ diff --git a/src/H5Omessage.c b/src/H5Omessage.c index 930be9b..e156dcd 100644 --- a/src/H5Omessage.c +++ b/src/H5Omessage.c @@ -239,7 +239,7 @@ done: * Purpose: Modifies an existing message or creates a new message. * * The UPDATE_FLAGS argument are flags that allow the caller - * to skip updating the modification time or reseting the message + * to skip updating the modification time or resetting the message * data. This is useful when several calls to H5O_msg_write will be * made in a sequence. * @@ -296,7 +296,7 @@ done: * Purpose: Modifies an existing message or creates a new message. * * The UPDATE_FLAGS argument are flags that allow the caller - * to skip updating the modification time or reseting the message + * to skip updating the modification time or resetting the message * data. This is useful when several calls to H5O_msg_write will be * made in a sequence. * @@ -343,7 +343,7 @@ done: * Purpose: Modifies an existing message or creates a new message. * * The UPDATE_FLAGS argument are flags that allow the caller - * to skip updating the modification time or reseting the message + * to skip updating the modification time or resetting the message * data. This is useful when several calls to H5O_msg_write will be * made in a sequence. * diff --git a/src/H5Oshared.c b/src/H5Oshared.c index 047f90e..328ba4b 100644 --- a/src/H5Oshared.c +++ b/src/H5Oshared.c @@ -640,7 +640,7 @@ done: /*------------------------------------------------------------------------- * Function: H5O__shared_post_copy_file * - * Purpose: Delate a shared message and replace with a new one. + * Purpose: Delete a shared message and replace with a new one. * The function is needed at cases such as coping a shared reg_ref attribute. * When a shared reg_ref attribute is copied from one file to * another, the values in file need to be replaced. The only way @@ -399,7 +399,7 @@ done: GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS The 'set' callback function may be useful to range check the value being - set for the property or may perform some tranformation/translation of the + set for the property or may perform some transformation/translation of the value set. The 'get' callback would then [probably] reverse the transformation, etc. A single 'get' or 'set' callback could handle multiple properties by performing different actions based on the property @@ -581,7 +581,7 @@ done: GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS The 'set' callback function may be useful to range check the value being - set for the property or may perform some tranformation/translation of the + set for the property or may perform some transformation/translation of the value set. The 'get' callback would then [probably] reverse the transformation, etc. A single 'get' or 'set' callback could handle multiple properties by performing different actions based on the property diff --git a/src/H5Pdcpl.c b/src/H5Pdcpl.c index d69b063..cb13ff3 100644 --- a/src/H5Pdcpl.c +++ b/src/H5Pdcpl.c @@ -1332,7 +1332,7 @@ done: /*------------------------------------------------------------------------- * Function: H5P__dcrt_ext_file_list_get * - * Purpose: Copies an external file lsit property when it's retrieved from a property list + * Purpose: Copies an external file list property when it's retrieved from a property list * * Return: Success: Non-negative * Failure: Negative @@ -2245,7 +2245,7 @@ H5Pset_virtual(hid_t dcpl_id, hid_t vspace_id, const char *src_file_name, done: /* Set VDS layout information in property list */ - /* (Even on faliure, so there's not a mangled layout struct in the list) */ + /* (Even on failure, so there's not a mangled layout struct in the list) */ if(retrieved_layout) { if(H5P_poke(plist, H5D_CRT_LAYOUT_NAME, &virtual_layout) < 0) { HDONE_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set layout") diff --git a/src/H5Pdeprec.c b/src/H5Pdeprec.c index 7f96333..226d206 100644 --- a/src/H5Pdeprec.c +++ b/src/H5Pdeprec.c @@ -202,7 +202,7 @@ GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS The 'set' callback function may be useful to range check the value being - set for the property or may perform some tranformation/translation of the + set for the property or may perform some transformation/translation of the value set. The 'get' callback would then [probably] reverse the transformation, etc. A single 'get' or 'set' callback could handle multiple properties by performing different actions based on the property @@ -383,7 +383,7 @@ done: GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS The 'set' callback function may be useful to range check the value being - set for the property or may perform some tranformation/translation of the + set for the property or may perform some transformation/translation of the value set. The 'get' callback would then [probably] reverse the transformation, etc. A single 'get' or 'set' callback could handle multiple properties by performing different actions based on the property diff --git a/src/H5Pdxpl.c b/src/H5Pdxpl.c index b56c137..e6eed32 100644 --- a/src/H5Pdxpl.c +++ b/src/H5Pdxpl.c @@ -1035,7 +1035,7 @@ done: * for the type conversion buffer and background buffer and * optionally supply pointers to application-allocated buffers. * If the buffer size is smaller than the entire amount of data - * being transfered between application and file, and a type + * being transferred between application and file, and a type * conversion buffer or background buffer is required then * strip mining will be used. * diff --git a/src/H5Pfapl.c b/src/H5Pfapl.c index eded286..7ba9c11 100644 --- a/src/H5Pfapl.c +++ b/src/H5Pfapl.c @@ -396,7 +396,7 @@ static const hbool_t H5F_def_coll_md_write_flag_g = H5F_ACS_COLL_MD_WRITE_FLAG_D static const H5AC_cache_image_config_t H5F_def_mdc_initCacheImageCfg_g = H5F_ACS_META_CACHE_INIT_IMAGE_CONFIG_DEF; /* Default metadata cache image settings */ static const size_t H5F_def_page_buf_size_g = H5F_ACS_PAGE_BUFFER_SIZE_DEF; /* Default page buffer size */ static const unsigned H5F_def_page_buf_min_meta_perc_g = H5F_ACS_PAGE_BUFFER_MIN_META_PERC_DEF; /* Default page buffer minimum metadata size */ -static const unsigned H5F_def_page_buf_min_raw_perc_g = H5F_ACS_PAGE_BUFFER_MIN_RAW_PERC_DEF; /* Default page buffer minumum raw data size */ +static const unsigned H5F_def_page_buf_min_raw_perc_g = H5F_ACS_PAGE_BUFFER_MIN_RAW_PERC_DEF; /* Default page buffer mininum raw data size */ /*------------------------------------------------------------------------- @@ -1713,7 +1713,7 @@ H5Pget_mdc_image_config(hid_t plist_id, H5AC_cache_image_config_t *config_ptr) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "Unknown image config version.") /* If we ever support multiple versions of H5AC_cache_config_t, we - * will have to get the cannonical version here, and then translate + * will have to get the canonical version here, and then translate * to the version of the structure supplied. */ @@ -1808,7 +1808,7 @@ H5Pget_mdc_config(hid_t plist_id, H5AC_cache_config_t *config_ptr) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "Unknown config version.") /* If we ever support multiple versions of H5AC_cache_config_t, we - * will have to get the cannonical version here, and then translate + * will have to get the canonical version here, and then translate * to the version of the structure supplied. */ @@ -2322,7 +2322,7 @@ done: * necessary to represent features used. * (This is the "make certain to take advantage of <new feature> * in the file format" use case (maybe <new feature> is smaller - * or scales better than an ealier version, which would otherwise + * or scales better than an earlier version, which would otherwise * be used)) * * LOW = H5F_FORMAT_1_2_0, HIGH = H5F_FORMAT_1_6_0 => creates objects @@ -2549,7 +2549,7 @@ H5Pset_file_image(hid_t fapl_id, void *buf_ptr, size_t buf_len) /* validate parameters */ if(!(((buf_ptr == NULL) && (buf_len == 0)) || ((buf_ptr != NULL) && (buf_len > 0)))) - HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "inconsistant buf_ptr and buf_len") + HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "inconsistent buf_ptr and buf_len") /* Get the plist structure */ if(NULL == (fapl = H5P_object_verify(fapl_id, H5P_FILE_ACCESS))) @@ -2652,7 +2652,7 @@ H5Pget_file_image(hid_t fapl_id, void **buf_ptr_ptr, size_t *buf_len_ptr) if(H5P_peek(fapl, H5F_ACS_FILE_IMAGE_INFO_NAME, &image_info) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get file image info") - /* verify file image field consistancy */ + /* verify file image field consistency */ HDassert(((image_info.buffer != NULL) && (image_info.size > 0)) || ((image_info.buffer == NULL) && (image_info.size == 0))); @@ -2728,7 +2728,7 @@ H5Pset_file_image_callbacks(hid_t fapl_id, H5FD_file_image_callbacks_t *callback if(H5P_peek(fapl, H5F_ACS_FILE_IMAGE_INFO_NAME, &info) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get old file image info") - /* verify file image field consistancy */ + /* verify file image field consistency */ HDassert(((info.buffer != NULL) && (info.size > 0)) || ((info.buffer == NULL) && (info.size == 0))); @@ -2804,7 +2804,7 @@ H5Pget_file_image_callbacks(hid_t fapl_id, H5FD_file_image_callbacks_t *callback if(H5P_peek(fapl, H5F_ACS_FILE_IMAGE_INFO_NAME, &info) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get file image info") - /* verify file image field consistancy */ + /* verify file image field consistency */ HDassert(((info.buffer != NULL) && (info.size > 0)) || ((info.buffer == NULL) && (info.size == 0))); @@ -2858,7 +2858,7 @@ H5P__file_image_info_copy(void *value) info = (H5FD_file_image_info_t *)value; - /* verify file image field consistancy */ + /* verify file image field consistency */ HDassert(((info->buffer != NULL) && (info->size > 0)) || ((info->buffer == NULL) && (info->size == 0))); @@ -2932,7 +2932,7 @@ H5P__file_image_info_free(void *value) info = (H5FD_file_image_info_t *)value; - /* Verify file image field consistancy */ + /* Verify file image field consistency */ HDassert(((info->buffer != NULL) && (info->size > 0)) || ((info->buffer == NULL) && (info->size == 0))); diff --git a/src/H5Pfcpl.c b/src/H5Pfcpl.c index 6b0d2c0..f90dae5 100644 --- a/src/H5Pfcpl.c +++ b/src/H5Pfcpl.c @@ -545,7 +545,7 @@ H5Pset_sym_k(hid_t plist_id, unsigned ik, unsigned lk) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "istore IK value exceeds maximum B-tree entries"); if(H5P_get(plist, H5F_CRT_BTREE_RANK_NAME, btree_k) < 0) - HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get rank for btree interanl nodes"); + HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get rank for btree internal nodes"); btree_k[H5B_SNODE_ID] = ik; if(H5P_set(plist, H5F_CRT_BTREE_RANK_NAME, btree_k) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set rank for btree nodes"); @@ -650,10 +650,10 @@ H5Pset_istore_k(hid_t plist_id, unsigned ik) /* Set value */ if(H5P_get(plist, H5F_CRT_BTREE_RANK_NAME, btree_k) < 0) - HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get rank for btree interanl nodes"); + HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get rank for btree internal nodes"); btree_k[H5B_CHUNK_ID] = ik; if(H5P_set(plist, H5F_CRT_BTREE_RANK_NAME, btree_k) < 0) - HGOTO_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set rank for btree interanl nodes"); + HGOTO_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set rank for btree internal nodes"); done: FUNC_LEAVE_API(ret_value) @@ -698,7 +698,7 @@ H5Pget_istore_k(hid_t plist_id, unsigned *ik /*out */ ) /* Get value */ if(ik) { if(H5P_get(plist, H5F_CRT_BTREE_RANK_NAME, btree_k) < 0) - HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get rank for btree interanl nodes"); + HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get rank for btree internal nodes"); *ik = btree_k[H5B_CHUNK_ID]; } /* end if */ diff --git a/src/H5Pint.c b/src/H5Pint.c index 0e78463..6a0cc14 100644 --- a/src/H5Pint.c +++ b/src/H5Pint.c @@ -1398,7 +1398,7 @@ H5P_free_del_name_cb(void *item, void H5_ATTR_UNUSED *key, void H5_ATTR_UNUSED * NAME H5P_access_class PURPOSE - Internal routine to increment or decrement list & class dependancies on a + Internal routine to increment or decrement list & class dependencies on a property list class USAGE herr_t H5P_access_class(pclass,mod) @@ -1407,7 +1407,7 @@ H5P_free_del_name_cb(void *item, void H5_ATTR_UNUSED *key, void H5_ATTR_UNUSED * RETURNS Returns non-negative on success, negative on failure. DESCRIPTION - Increment/Decrement the class or list dependancies for a given class. + Increment/Decrement the class or list dependencies for a given class. This routine is the final arbiter on decisions about actually releasing a class in memory, such action is only taken when the reference counts for both dependent classes & lists reach zero. @@ -1425,19 +1425,19 @@ H5P_access_class(H5P_genclass_t *pclass, H5P_class_mod_t mod) HDassert(mod > H5P_MOD_ERR && mod < H5P_MOD_MAX); switch(mod) { - case H5P_MOD_INC_CLS: /* Increment the dependant class count*/ + case H5P_MOD_INC_CLS: /* Increment the dependent class count*/ pclass->classes++; break; - case H5P_MOD_DEC_CLS: /* Decrement the dependant class count*/ + case H5P_MOD_DEC_CLS: /* Decrement the dependent class count*/ pclass->classes--; break; - case H5P_MOD_INC_LST: /* Increment the dependant list count*/ + case H5P_MOD_INC_LST: /* Increment the dependent list count*/ pclass->plists++; break; - case H5P_MOD_DEC_LST: /* Decrement the dependant list count*/ + case H5P_MOD_DEC_LST: /* Decrement the dependent list count*/ pclass->plists--; break; @@ -1586,12 +1586,12 @@ H5P_create_class(H5P_genclass_t *par_class, const char *name, H5P_plist_type_t t /* Allocate room for the class */ if(NULL == (pclass = H5FL_CALLOC(H5P_genclass_t))) - HGOTO_ERROR(H5E_PLIST, H5E_CANTALLOC, NULL, "propery list class allocation failed") + HGOTO_ERROR(H5E_PLIST, H5E_CANTALLOC, NULL, "property list class allocation failed") /* Set class state */ pclass->parent = par_class; if(NULL == (pclass->name = H5MM_xstrdup(name))) - HGOTO_ERROR(H5E_PLIST, H5E_CANTALLOC, NULL, "propery list class name allocation failed") + HGOTO_ERROR(H5E_PLIST, H5E_CANTALLOC, NULL, "property list class name allocation failed") pclass->type = type; pclass->nprops = 0; /* Classes are created without properties initially */ pclass->plists = 0; /* No properties lists of this class yet */ @@ -2026,7 +2026,7 @@ done: GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS The 'set' callback function may be useful to range check the value being - set for the property or may perform some tranformation/translation of the + set for the property or may perform some transformation/translation of the value set. The 'get' callback would then [probably] reverse the transformation, etc. A single 'get' or 'set' callback could handle multiple properties by performing different actions based on the property @@ -2258,7 +2258,7 @@ done: GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS The 'set' callback function may be useful to range check the value being - set for the property or may perform some tranformation/translation of the + set for the property or may perform some transformation/translation of the value set. The 'get' callback would then [probably] reverse the transformation, etc. A single 'get' or 'set' callback could handle multiple properties by performing different actions based on the property @@ -2499,7 +2499,7 @@ done: GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS The 'set' callback function may be useful to range check the value being - set for the property or may perform some tranformation/translation of the + set for the property or may perform some transformation/translation of the value set. The 'get' callback would then [probably] reverse the transformation, etc. A single 'get' or 'set' callback could handle multiple properties by performing different actions based on the property @@ -2636,7 +2636,7 @@ H5P__do_prop(H5P_genplist_t *plist, const char *name, H5P_do_plist_op_t plist_op /* Find property in changed list */ if(NULL != (prop = (H5P_genprop_t *)H5SL_search(plist->props, name))) { - /* Call the 'found in propery list' callback */ + /* Call the 'found in property list' callback */ if((*plist_op)(plist, name, prop, udata) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTOPERATE, FAIL, "can't operate on property") } /* end if */ @@ -4020,7 +4020,7 @@ H5P_iterate_plist(const H5P_genplist_t *plist, hbool_t iter_all_prop, int *idx, /* Check for iterating over all properties, or just non-default ones */ if(iter_all_prop) { - /* Walk up the class hiearchy */ + /* Walk up the class hierarchy */ tclass = plist->pclass; while(tclass != NULL) { /* Iterate over properties in property list class */ @@ -4737,7 +4737,7 @@ H5P_copy_prop_pclass(hid_t dst_id, hid_t src_id, const char *name) /* Sanity check */ HDassert(name); - /* Get propery list classes */ + /* Get property list classes */ if(NULL == (src_pclass = (H5P_genclass_t *)H5I_object(src_id))) HGOTO_ERROR(H5E_PLIST, H5E_NOTFOUND, FAIL, "source property class object doesn't exist") if(NULL == (dst_pclass = (H5P_genclass_t *)H5I_object(dst_id))) @@ -4854,8 +4854,8 @@ done: GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS The property list class 'close' callback routine is not called from - here, it must have been check for and called properly prior to this routine - being called + here, it must have been checked for and called properly prior to this routine + being called. EXAMPLES REVISION LOG --------------------------------------------------------------------------*/ @@ -4981,7 +4981,7 @@ H5P_close(void *_plist) tclass=tclass->parent; } /* end while */ - /* Decrement class's dependant property list value! */ + /* Decrement class's dependent property list value! */ if(H5P_access_class(plist->pclass,H5P_MOD_DEC_LST) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTINIT, FAIL, "Can't decrement class ref count") diff --git a/src/H5Ppkg.h b/src/H5Ppkg.h index 13463ae..60b2363 100644 --- a/src/H5Ppkg.h +++ b/src/H5Ppkg.h @@ -51,10 +51,10 @@ typedef enum { /* Define enum for modifications to class */ typedef enum { H5P_MOD_ERR=(-1), /* Indicate an error */ - H5P_MOD_INC_CLS, /* Increment the dependant class count*/ - H5P_MOD_DEC_CLS, /* Decrement the dependant class count*/ - H5P_MOD_INC_LST, /* Increment the dependant list count*/ - H5P_MOD_DEC_LST, /* Decrement the dependant list count*/ + H5P_MOD_INC_CLS, /* Increment the dependent class count*/ + H5P_MOD_DEC_CLS, /* Decrement the dependent class count*/ + H5P_MOD_INC_LST, /* Increment the dependent list count*/ + H5P_MOD_DEC_LST, /* Decrement the dependent list count*/ H5P_MOD_INC_REF, /* Increment the ID reference count*/ H5P_MOD_DEC_REF, /* Decrement the ID reference count*/ H5P_MOD_MAX /* Upper limit on class modifications */ @@ -89,7 +89,7 @@ struct H5P_genclass_t { size_t nprops; /* Number of properties in class */ unsigned plists; /* Number of property lists that have been created since the last modification to the class */ unsigned classes; /* Number of classes that have been derived since the last modification to the class */ - unsigned ref_count; /* Number of oustanding ID's open on this class object */ + unsigned ref_count; /* Number of outstanding ID's open on this class object */ hbool_t deleted; /* Whether this class has been deleted and is waiting for dependent classes & proplists to close */ unsigned revision; /* Revision number of a particular class (global) */ H5SL_t *props; /* Skip list containing properties */ diff --git a/src/H5Ppublic.h b/src/H5Ppublic.h index a2c0418..58f3d18 100644 --- a/src/H5Ppublic.h +++ b/src/H5Ppublic.h @@ -139,7 +139,7 @@ typedef enum H5D_mpio_actual_chunk_opt_mode_t { typedef enum H5D_mpio_actual_io_mode_t { /* The following four values are conveniently defined as a bit field so that - * we can switch from the default to indpendent or collective and then to + * we can switch from the default to independent or collective and then to * mixed without having to check the original value. * * NO_COLLECTIVE means that either collective I/O wasn't requested or that diff --git a/src/H5SMpkg.h b/src/H5SMpkg.h index a9a4fd9..bb458a7 100644 --- a/src/H5SMpkg.h +++ b/src/H5SMpkg.h @@ -96,7 +96,7 @@ #define H5SM_B2_SPLIT_PERCENT 100 #define H5SM_B2_MERGE_PERCENT 40 -#define H5SM_LIST_VERSION 0 /* Verion of Shared Object Header Message List Indexes */ +#define H5SM_LIST_VERSION 0 /* Version of Shared Object Header Message List Indexes */ /****************************/ /* Package Typedefs */ diff --git a/src/H5Sall.c b/src/H5Sall.c index 11dd8e1..28395b1 100644 --- a/src/H5Sall.c +++ b/src/H5Sall.c @@ -432,7 +432,7 @@ H5S__all_copy(H5S_t *dst, const H5S_t H5_ATTR_UNUSED *src, hbool_t H5_ATTR_UNUSE TRUE if the selection fits within the extent, FALSE if it does not and Negative on an error. DESCRIPTION - Determines if the current selection at the current offet fits within the + Determines if the current selection at the current offset fits within the extent for the dataspace. Offset is irrelevant for this type of selection. GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS diff --git a/src/H5Shyper.c b/src/H5Shyper.c index 47eb573..5653209 100644 --- a/src/H5Shyper.c +++ b/src/H5Shyper.c @@ -853,7 +853,7 @@ H5S__hyper_iter_next(H5S_sel_iter_t *iter, size_t nelem) /* Check if we are finished with the spans in the tree */ if(curr_dim >= 0) { - /* Walk back down the iterator positions, reseting them */ + /* Walk back down the iterator positions, resetting them */ while(curr_dim < fast_dim) { HDassert(curr_span); HDassert(curr_span->down); @@ -1037,7 +1037,7 @@ H5S__hyper_iter_next_block(H5S_sel_iter_t *iter) /* Check if we are finished with the spans in the tree */ if(curr_dim >= 0) { - /* Walk back down the iterator positions, reseting them */ + /* Walk back down the iterator positions, resetting them */ while(curr_dim < fast_dim) { HDassert(curr_span); HDassert(curr_span->down); @@ -1704,7 +1704,7 @@ done: RETURNS TRUE if the selection fits within the extent, FALSE if it does not DESCRIPTION - Determines if the current selection at the current offet fits within the + Determines if the current selection at the current offset fits within the extent for the dataspace. GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS @@ -1762,7 +1762,7 @@ done: TRUE if the selection fits within the extent, FALSE if it does not and Negative on an error. DESCRIPTION - Determines if the current selection at the current offet fits within the + Determines if the current selection at the current offset fits within the extent for the dataspace. GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS @@ -2052,7 +2052,7 @@ H5S__hyper_serialize_helper(const H5S_hyper_span_info_t *spans, HDassert(rank < H5O_LAYOUT_NDIMS); HDassert(p && pp); - /* Walk through the list of spans, recursing or outputing them */ + /* Walk through the list of spans, recursing or outputting them */ curr = spans->head; while(curr != NULL) { /* Recurse if this node has down spans */ @@ -2458,7 +2458,7 @@ H5S__hyper_span_blocklist(const H5S_hyper_span_info_t *spans, hsize_t start[], HDassert(numblocks && *numblocks > 0); HDassert(buf && *buf); - /* Walk through the list of spans, recursing or outputing them */ + /* Walk through the list of spans, recursing or outputting them */ curr = spans->head; while(curr != NULL && *numblocks > 0) { /* Recurse if this node has down spans */ @@ -3509,7 +3509,7 @@ done: NAME H5S__hyper_add_span_element_helper PURPOSE - Add a single elment to a span tree + Add a single element to a span tree USAGE herr_t H5S_hyper_add_span_element_helper(prev_span, span_tree, rank, coords) H5S_hyper_span_info_t *span_tree; IN/OUT: Pointer to span tree to append to @@ -3713,7 +3713,7 @@ done: NAME H5S_hyper_add_span_element PURPOSE - Add a single elment to a span tree + Add a single element to a span tree USAGE herr_t H5S_hyper_add_span_element(space, span_tree, rank, coords) H5S_t *space; IN/OUT: Pointer to dataspace to add coordinate to @@ -8101,7 +8101,7 @@ H5S__hyper_get_seq_list_gen(const H5S_t *space, H5S_sel_iter_t *iter, /* Check if we have more spans in the tree */ if(curr_dim >= 0) { - /* Walk back down the iterator positions, reseting them */ + /* Walk back down the iterator positions, resetting them */ while((unsigned)curr_dim < fast_dim) { HDassert(curr_span); HDassert(curr_span->down); @@ -8280,7 +8280,7 @@ H5S__hyper_get_seq_list_gen(const H5S_t *space, H5S_sel_iter_t *iter, break; } /* end if */ else { - /* Walk back down the iterator positions, reseting them */ + /* Walk back down the iterator positions, resetting them */ while((unsigned)curr_dim < fast_dim) { HDassert(curr_span); HDassert(curr_span->down); diff --git a/src/H5Smpio.c b/src/H5Smpio.c index 5c65119..db81ffc 100644 --- a/src/H5Smpio.c +++ b/src/H5Smpio.c @@ -909,10 +909,9 @@ H5S_mpio_hyper_type(const H5S_t *space, size_t elmt_size, else inner_type = outer_type; } /* end for */ -/*************************** -* End of loop, walking -* thru dimensions. -***************************/ +/****************************************** +* End of loop, walking through dimensions. +*******************************************/ /* At this point inner_type is actually the outermost type, even for 0-trip loop */ *new_type = inner_type; diff --git a/src/H5Snone.c b/src/H5Snone.c index 19d0b5f..a46a71a 100644 --- a/src/H5Snone.c +++ b/src/H5Snone.c @@ -408,7 +408,7 @@ H5S_none_copy(H5S_t *dst, const H5S_t H5_ATTR_UNUSED *src, hbool_t H5_ATTR_UNUSE TRUE if the selection fits within the extent, FALSE if it does not and Negative on an error. DESCRIPTION - Determines if the current selection at the current offet fits within the + Determines if the current selection at the current offset fits within the extent for the dataspace. Offset is irrelevant for this type of selection. GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS diff --git a/src/H5Spoint.c b/src/H5Spoint.c index 442bb2a..fb8e311 100644 --- a/src/H5Spoint.c +++ b/src/H5Spoint.c @@ -676,7 +676,7 @@ done: TRUE if the selection fits within the extent, FALSE if it does not and Negative on an error. DESCRIPTION - Determines if the current selection at the current offet fits within the + Determines if the current selection at the current offset fits within the extent for the dataspace. GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS diff --git a/src/H5Sselect.c b/src/H5Sselect.c index 8cd73d9..ec74523 100644 --- a/src/H5Sselect.c +++ b/src/H5Sselect.c @@ -361,7 +361,7 @@ H5S_get_select_npoints(const H5S_t *space) TRUE if the selection fits within the extent, FALSE if it does not and Negative on an error. DESCRIPTION - Determines if the current selection at the current offet fits within the + Determines if the current selection at the current offset fits within the extent for the dataspace. GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS @@ -403,7 +403,7 @@ done: TRUE if the selection fits within the extent, FALSE if it does not and Negative on an error. DESCRIPTION - Determines if the current selection at the current offet fits within the + Determines if the current selection at the current offset fits within the extent for the dataspace. GLOBAL VARIABLES COMMENTS, BUGS, ASSUMPTIONS @@ -309,7 +309,7 @@ static H5T_path_t *H5T__path_find_real(const H5T_t *src, const H5T_t *dst, /* Library Private Variables */ /*****************************/ -/* The native endianess of the platform */ +/* The native endianness of the platform */ H5T_order_t H5T_native_order_g = H5T_ORDER_ERROR; diff --git a/src/H5Tcommit.c b/src/H5Tcommit.c index 4e4a551..1719f8f 100644 --- a/src/H5Tcommit.c +++ b/src/H5Tcommit.c @@ -385,7 +385,7 @@ H5T__commit(H5F_t *file, H5T_t *type, hid_t tcpl_id) if(H5T_set_version(file, type) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTSET, FAIL, "can't set version of datatype") - /* Calculate message size infomation, for creating object header */ + /* Calculate message size information, for creating object header */ dtype_size = H5O_msg_size_f(file, tcpl_id, H5O_DTYPE_ID, type, (size_t)0); HDassert(dtype_size); diff --git a/src/H5Tconv.c b/src/H5Tconv.c index f3af9e1..803a6da 100644 --- a/src/H5Tconv.c +++ b/src/H5Tconv.c @@ -109,7 +109,7 @@ * least as large as the destination. Overflows can occur when * the destination is narrower than the source. * - * xF: Integers to float-point(float or double) values where the desination + * xF: Integers to float-point(float or double) values where the destination * is at least as wide as the source. This case cannot generate * overflows. * @@ -2102,7 +2102,7 @@ H5T__conv_struct_subset(const H5T_cdata_t *cdata) * * For each element do * For I=1..NELMTS do - * If sizeof detination type <= sizeof source type then + * If sizeof destination type <= sizeof source type then * Convert member to destination type; * Move member as far left as possible; * @@ -2314,7 +2314,7 @@ done: * function. The algorithm is basically: * * For each member of the struct - * If sizeof detination type <= sizeof source type then + * If sizeof destination type <= sizeof source type then * Convert member to destination type for all elements * Move memb to BKG buffer for all elements * Else @@ -2421,7 +2421,7 @@ H5T__conv_struct_opt(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata, offset -= src_memb->size; if(dst_memb->size > src->shared->size-offset) { cdata->priv = H5T_conv_struct_free(priv); - HGOTO_ERROR(H5E_DATATYPE, H5E_UNSUPPORTED, FAIL, "convertion is unsupported by this function") + HGOTO_ERROR(H5E_DATATYPE, H5E_UNSUPPORTED, FAIL, "conversion is unsupported by this function") } /* end if */ } /* end if */ } /* end for */ @@ -4250,7 +4250,7 @@ H5T__conv_f_f(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata, size_t nelmts, /* * The exponent is too small to fit in the exponent field, * but by shifting the mantissa to the right we can - * accomodate that value. The mantissa of course is no + * accommodate that value. The mantissa of course is no * longer normalized. */ mrsh += (size_t)(1 - expo); diff --git a/src/H5Toffset.c b/src/H5Toffset.c index 668e730..c0e94fc 100644 --- a/src/H5Toffset.c +++ b/src/H5Toffset.c @@ -33,12 +33,12 @@ static herr_t H5T_set_offset(const H5T_t *dt, size_t offset); * Function: H5Tget_offset * * Purpose: Retrieves the bit offset of the first significant bit. The - * signficant bits of an atomic datum can be offset from the + * significant bits of an atomic datum can be offset from the * beginning of the memory for that datum by an amount of * padding. The `offset' property specifies the number of bits * of padding that appear to the "right of" the value. That is, * if we have a 32-bit datum with 16-bits of precision having - * the value 0x1122 then it will be layed out in memory as (from + * the value 0x1122 then it will be laid out in memory as (from * small byte address toward larger byte addresses): * * Big Big Little Little @@ -84,12 +84,12 @@ done: * Function: H5T_get_offset * * Purpose: Retrieves the bit offset of the first significant bit. The - * signficant bits of an atomic datum can be offset from the + * significant bits of an atomic datum can be offset from the * beginning of the memory for that datum by an amount of * padding. The `offset' property specifies the number of bits * of padding that appear to the "right of" the value. That is, * if we have a 32-bit datum with 16-bits of precision having - * the value 0x1122 then it will be layed out in memory as (from + * the value 0x1122 then it will be laid out in memory as (from * small byte address toward larger byte addresses): * * Big Big Little Little @@ -134,12 +134,12 @@ done: * Function: H5Tset_offset * * Purpose: Sets the bit offset of the first significant bit. The - * signficant bits of an atomic datum can be offset from the + * significant bits of an atomic datum can be offset from the * beginning of the memory for that datum by an amount of * padding. The `offset' property specifies the number of bits * of padding that appear to the "right of" the value. That is, * if we have a 32-bit datum with 16-bits of precision having - * the value 0x1122 then it will be layed out in memory as (from + * the value 0x1122 then it will be laid out in memory as (from * small byte address toward larger byte addresses): * * Big Big Little Little @@ -203,12 +203,12 @@ done: * Function: H5T_set_offset * * Purpose: Sets the bit offset of the first significant bit. The - * signficant bits of an atomic datum can be offset from the + * significant bits of an atomic datum can be offset from the * beginning of the memory for that datum by an amount of * padding. The `offset' property specifies the number of bits * of padding that appear to the "right of" the value. That is, * if we have a 32-bit datum with 16-bits of precision having - * the value 0x1122 then it will be layed out in memory as (from + * the value 0x1122 then it will be laid out in memory as (from * small byte address toward larger byte addresses): * * Big Big Little Little diff --git a/src/H5Tpkg.h b/src/H5Tpkg.h index 96132b0..e1b996c 100644 --- a/src/H5Tpkg.h +++ b/src/H5Tpkg.h @@ -295,7 +295,7 @@ typedef enum H5T_state_t { H5T_STATE_OPEN /*named constant, open object header */ } H5T_state_t; - /* This struct is shared between all occurances of an open named type */ + /* This struct is shared between all occurrences of an open named type */ typedef struct H5T_shared_t { hsize_t fo_count; /* number of references to this file object */ H5T_state_t state; /*current state of the type */ diff --git a/src/H5Tprivate.h b/src/H5Tprivate.h index 8051b6d..89cdcfd 100644 --- a/src/H5Tprivate.h +++ b/src/H5Tprivate.h @@ -100,7 +100,7 @@ typedef struct H5T_subset_info_t { /* Forward declarations for prototype arguments */ struct H5O_t; -/* The native endianess of the platform */ +/* The native endianness of the platform */ H5_DLLVAR H5T_order_t H5T_native_order_g; /* Private functions */ diff --git a/src/H5Znbit.c b/src/H5Znbit.c index c0afc38..fe0041c 100644 --- a/src/H5Znbit.c +++ b/src/H5Znbit.c @@ -558,7 +558,7 @@ H5Z_set_parms_array(const H5T_t *type, unsigned *cd_values_index, H5T_t *dtype_base = NULL; /* Array datatype's base datatype */ H5T_class_t dtype_base_class; /* Array datatype's base datatype's class */ size_t dtype_size; /* Array datatype's size (in bytes) */ - htri_t is_vlstring; /* flag indicating if datatype is varible-length string */ + htri_t is_vlstring; /* flag indicating if datatype is variable-length string */ herr_t ret_value=SUCCEED; /* Return value */ FUNC_ENTER_NOAPI_NOINIT @@ -667,7 +667,7 @@ H5Z_set_parms_compound(const H5T_t *type, unsigned *cd_values_index, size_t dtype_member_offset; /* Compound datatype's current member datatype's offset (in bytes) */ size_t dtype_next_member_offset;/* Compound datatype's next member datatype's offset (in bytes) */ size_t dtype_size; /* Compound datatype's size (in bytes) */ - htri_t is_vlstring; /* flag indicating if datatype is varible-length string */ + htri_t is_vlstring; /* flag indicating if datatype is variable-length string */ unsigned u; /* Local index variable */ herr_t ret_value = SUCCEED; /* Return value */ diff --git a/src/H5Zpublic.h b/src/H5Zpublic.h index fcb2d37..0df05f0 100644 --- a/src/H5Zpublic.h +++ b/src/H5Zpublic.h @@ -50,7 +50,7 @@ typedef int H5Z_filter_t; * unlimited amount, but currently each * filter uses a bit in a 32-bit field, * so the format would have to be - * changed to accomodate that) + * changed to accommodate that) */ /* Flags for filter definition (stored) */ diff --git a/src/H5Zscaleoffset.c b/src/H5Zscaleoffset.c index d139696..cdf31a4 100644 --- a/src/H5Zscaleoffset.c +++ b/src/H5Zscaleoffset.c @@ -988,7 +988,7 @@ H5Z_set_local_scaleoffset(hid_t dcpl_id, hid_t type_id, hid_t space_id) if(status == H5D_FILL_VALUE_UNDEFINED) cd_values[H5Z_SCALEOFFSET_PARM_FILAVAIL] = H5Z_SCALEOFFSET_FILL_UNDEFINED; else { - int need_convert = FALSE; /* Flag indicating convertion of byte order */ + int need_convert = FALSE; /* Flag indicating conversion of byte order */ cd_values[H5Z_SCALEOFFSET_PARM_FILAVAIL] = H5Z_SCALEOFFSET_FILL_DEFINED; @@ -1047,7 +1047,7 @@ H5Z_filter_scaleoffset(unsigned flags, size_t cd_nelmts, const unsigned cd_value uint32_t minbits = 0; /* minimum number of bits to store values */ unsigned long long minval= 0; /* minimum value of input buffer */ enum H5Z_scaleoffset_t type; /* memory type corresponding to dataset datatype */ - int need_convert = FALSE; /* flag indicating convertion of byte order */ + int need_convert = FALSE; /* flag indicating conversion of byte order */ unsigned char *outbuf = NULL; /* pointer to new output buffer */ unsigned buf_offset = 21; /* buffer offset because of parameters stored in file */ unsigned i; /* index */ diff --git a/src/H5Ztrans.c b/src/H5Ztrans.c index d4b59a6..67646a0 100644 --- a/src/H5Ztrans.c +++ b/src/H5Ztrans.c @@ -329,7 +329,7 @@ static void H5Z_print(H5Z_node *tree, FILE *stream); } /* The difference of this macro from H5Z_XFORM_DO_OP3 is that it handles the operations when the left operand is empty, like -x or +x. - * The reason that it's seperated from H5Z_XFORM_DO_OP3 is because compilers don't accept operations like *x or /x. So in H5Z_do_op, + * The reason that it's separated from H5Z_XFORM_DO_OP3 is because compilers don't accept operations like *x or /x. So in H5Z_do_op, * these two macros are called in different ways. (SLU 2012/3/20) */ #define H5Z_XFORM_DO_OP6(OP) \ @@ -967,7 +967,7 @@ done: /*------------------------------------------------------------------------- * Function: H5Z_new_node - * Purpose: Create and initilize a new H5Z_node structure. + * Purpose: Create and initialize a new H5Z_node structure. * Return: Success: Valid H5Z_node ptr * NULLure: NULL * Programmer: Bill Wendling @@ -999,7 +999,7 @@ done: * Purpose: If the transform is trivial, this function applies it. * Otherwise, it calls H5Z_xform_eval_full to do the full * transform. - * Return: SUCCEED if transform applied succesfully, FAIL otherwise + * Return: SUCCEED if transform applied successfully, FAIL otherwise * Programmer: Leon Arber * 5/1/04 * Modifications: @@ -1485,7 +1485,7 @@ H5Z_xform_reduce_tree(H5Z_node* tree) * Purpose: If the root of the tree passed in points to a simple * arithmetic operation and the left and right subtrees are both * integer or floating point values, this function does that - * operation, free the left and rigt subtrees, and replaces + * operation, free the left and right subtrees, and replaces * the root with the result of the operation. * Return: None. * Programmer: Leon Arber diff --git a/src/H5detect.c b/src/H5detect.c index 1c5554e..6ad45aa 100644 --- a/src/H5detect.c +++ b/src/H5detect.c @@ -43,7 +43,7 @@ static const char *FileHeader = "\n\ * system or configure has detected those Unix * features which aren't available. We're not * running on a Vax or other machine with mixed - * endianess. + * endianness. * * Modifications: * @@ -695,7 +695,7 @@ H5T__init_native(void)\n\ FUNC_ENTER_PACKAGE\n"); for(i = 0; i < nd; i++) { - /* The native endianess of this machine */ + /* The native endianness of this machine */ /* The INFO.perm now contains `-1' for bytes that aren't used and * are always zero. This happens on the Cray for `short' where * sizeof(short) is 8, but only the low-order 4 bytes are ever used. @@ -1079,8 +1079,8 @@ fix_order(int n, int last, int *perm, const char **mesg) } else { /* * Bi-endian machines like VAX. - * (NOTE: This is not an actual determination of the VAX-endianess. - * It could have some other endianess and fall into this + * (NOTE: This is not an actual determination of the VAX-endianness. + * It could have some other endianness and fall into this * case - JKM & QAK) */ HDassert(0 == n % 2); @@ -1111,7 +1111,7 @@ fix_order(int n, int last, int *perm, const char **mesg) * * This function assumes that the exponent occupies higher * order bits than the mantissa and that the most significant - * bit of the mantissa is next to the least signficant bit + * bit of the mantissa is next to the least significant bit * of the exponent. * * @@ -1271,7 +1271,7 @@ mark. Bits of integer types are printed as\n\ If the most significant bit of the normalized\n\ mantissa (always a `1' except for `0.0') is\n\ not stored then an `implicit=yes' appears\n\ -under the field description. In thie case,\n\ +under the field description. In this case,\n\ the radix point is still assumed to be\n\ before the first `M' but after the implicit\n\ bit.\n"; diff --git a/src/H5private.h b/src/H5private.h index 6334f39..8974e46 100644 --- a/src/H5private.h +++ b/src/H5private.h @@ -116,7 +116,7 @@ #endif /* - * flock() in sys/file.h is used for the implemention of file locking. + * flock() in sys/file.h is used for the implementation of file locking. */ #if defined(H5_HAVE_FLOCK) && defined(H5_HAVE_SYS_FILE_H) # include <sys/file.h> @@ -132,7 +132,7 @@ /* * Unix ioctls. These are used by h5ls (and perhaps others) to determine a - * resonable output width. + * reasonable output width. */ #ifdef H5_HAVE_SYS_IOCTL_H # include <sys/ioctl.h> diff --git a/src/H5public.h b/src/H5public.h index 9157366..a4c80cd 100644 --- a/src/H5public.h +++ b/src/H5public.h @@ -115,7 +115,7 @@ extern "C" { /* * Status return values. Failed integer functions in HDF5 result almost * always in a negative value (unsigned failing functions sometimes return - * zero for failure) while successfull return is non-negative (often zero). + * zero for failure) while successful return is non-negative (often zero). * The negative failure value is most commonly -1, but don't bet on it. The * proper way to detect failure is something like: * @@ -298,7 +298,7 @@ typedef enum { } H5_iter_order_t; /* Iteration callback values */ -/* (Actually, any postive value will cause the iterator to stop and pass back +/* (Actually, any positive value will cause the iterator to stop and pass back * that positive value to the function that called the iterator) */ #define H5_ITER_ERROR (-1) diff --git a/src/H5system.c b/src/H5system.c index 719b7e0..186d8fa 100644 --- a/src/H5system.c +++ b/src/H5system.c @@ -294,13 +294,13 @@ HDfprintf(FILE *stream, const char *fmt, ...) unsigned short x = (unsigned short)va_arg(ap, unsigned int); n = fprintf(stream, format_templ, x); } else if(!*modifier) { - unsigned int x = va_arg(ap, unsigned int); /*lint !e732 Loss of sign not really occuring */ + unsigned int x = va_arg(ap, unsigned int); /*lint !e732 Loss of sign not really occurring */ n = fprintf(stream, format_templ, x); } else if(!HDstrcmp(modifier, "l")) { - unsigned long x = va_arg(ap, unsigned long); /*lint !e732 Loss of sign not really occuring */ + unsigned long x = va_arg(ap, unsigned long); /*lint !e732 Loss of sign not really occurring */ n = fprintf(stream, format_templ, x); } else { - uint64_t x = va_arg(ap, uint64_t); /*lint !e732 Loss of sign not really occuring */ + uint64_t x = va_arg(ap, uint64_t); /*lint !e732 Loss of sign not really occurring */ n = fprintf(stream, format_templ, x); } break; @@ -333,7 +333,7 @@ HDfprintf(FILE *stream, const char *fmt, ...) case 'a': { - haddr_t x = va_arg(ap, haddr_t); /*lint !e732 Loss of sign not really occuring */ + haddr_t x = va_arg(ap, haddr_t); /*lint !e732 Loss of sign not really occurring */ if(H5F_addr_defined(x)) { len = 0; @@ -387,7 +387,7 @@ HDfprintf(FILE *stream, const char *fmt, ...) case 's': case 'p': { - char *x = va_arg(ap, char*); /*lint !e64 Type mismatch not really occuring */ + char *x = va_arg(ap, char*); /*lint !e64 Type mismatch not really occurring */ n = fprintf(stream, format_templ, x); } break; |