summaryrefslogtreecommitdiffstats
path: root/src
diff options
context:
space:
mode:
authorQuincey Koziol <koziol@hdfgroup.org>2015-09-22 02:11:54 (GMT)
committerQuincey Koziol <koziol@hdfgroup.org>2015-09-22 02:11:54 (GMT)
commitaf25c747adf228eacbd0625f8cd41f84cb3fbbc3 (patch)
tree3b9b221cf15e6ee39153fcfd8099b7b9568d7e18 /src
parentfb238c24a5c6679c7555c95f887b7f4a49dbb640 (diff)
downloadhdf5-af25c747adf228eacbd0625f8cd41f84cb3fbbc3.zip
hdf5-af25c747adf228eacbd0625f8cd41f84cb3fbbc3.tar.gz
hdf5-af25c747adf228eacbd0625f8cd41f84cb3fbbc3.tar.bz2
[svn-r27851] Description:
Normalization changes that wouldn't otherwise be necessary if the VDS branch wasn't coming in shortly. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest forthcoming)
Diffstat (limited to 'src')
-rw-r--r--src/H5Osdspace.c4
-rw-r--r--src/H5S.c95
-rw-r--r--src/H5Spkg.h2
-rw-r--r--src/H5Sprivate.h2
-rw-r--r--src/H5Spublic.h2
-rw-r--r--src/H5Sselect.c9
-rw-r--r--src/H5public.h1
7 files changed, 77 insertions, 38 deletions
diff --git a/src/H5Osdspace.c b/src/H5Osdspace.c
index 0f3eb5d..28021de 100644
--- a/src/H5Osdspace.c
+++ b/src/H5Osdspace.c
@@ -312,7 +312,7 @@ H5O_sdspace_copy(const void *_mesg, void *_dest)
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
/* Copy extent information */
- if(H5S_extent_copy(dest, mesg, TRUE) < 0)
+ if(H5S_extent_copy_real(dest, mesg, TRUE) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCOPY, NULL, "can't copy extent")
/* Set return value */
@@ -467,7 +467,7 @@ H5O_sdspace_pre_copy_file(H5F_t H5_ATTR_UNUSED *file_src, const void *mesg_src,
HGOTO_ERROR(H5E_DATASPACE, H5E_NOSPACE, FAIL, "dataspace extent allocation failed")
/* Create a copy of the dataspace extent */
- if(H5S_extent_copy(udata->src_space_extent, src_space_extent, TRUE) < 0)
+ if(H5S_extent_copy_real(udata->src_space_extent, src_space_extent, TRUE) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCOPY, FAIL, "can't copy extent")
} /* end if */
diff --git a/src/H5S.c b/src/H5S.c
index 8850369..2c8288c 100644
--- a/src/H5S.c
+++ b/src/H5S.c
@@ -49,11 +49,9 @@
/********************/
/* Local Prototypes */
/********************/
-static herr_t H5S_set_extent_simple (H5S_t *space, unsigned rank,
- const hsize_t *dims, const hsize_t *max);
static htri_t H5S_is_simple(const H5S_t *sdim);
-static herr_t H5S_encode(H5S_t *obj, unsigned char *buf, size_t *nalloc);
-static H5S_t *H5S_decode(const unsigned char *buf);
+static herr_t H5S_encode(H5S_t *obj, unsigned char **p, size_t *nalloc);
+static H5S_t *H5S_decode(const unsigned char **p);
/*********************/
@@ -524,7 +522,40 @@ H5Sextent_copy(hid_t dst_id,hid_t src_id)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace")
/* Copy */
- if(H5S_extent_copy(&(dst->extent), &(src->extent), TRUE) < 0)
+ if(H5S_extent_copy(dst, src) < 0)
+ HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCOPY, FAIL, "can't copy extent")
+
+done:
+ FUNC_LEAVE_API(ret_value)
+} /* end H5Sextent_copy() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5S_extent_copy
+ *
+ * Purpose: Copies a dataspace extent
+ *
+ * Return: Non-negative on success/Negative on failure
+ *
+ * Programmer: Neil Fortner
+ * Monday, February 23, 2015
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5S_extent_copy(H5S_t *dst, const H5S_t *src)
+{
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_NOAPI(FAIL)
+
+ HDassert(dst);
+ HDassert(src);
+
+ /* Copy extent */
+ if(H5S_extent_copy_real(&(dst->extent), &(src->extent), TRUE) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCOPY, FAIL, "can't copy extent")
/* If the selection is 'all', update the number of elements selected in the
@@ -534,12 +565,12 @@ H5Sextent_copy(hid_t dst_id,hid_t src_id)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTDELETE, FAIL, "can't change selection")
done:
- FUNC_LEAVE_API(ret_value)
-} /* end H5Sextent_copy() */
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5S_extent_copy() */
/*-------------------------------------------------------------------------
- * Function: H5S_extent_copy
+ * Function: H5S_extent_copy_real
*
* Purpose: Copies a dataspace extent
*
@@ -553,7 +584,7 @@ done:
*-------------------------------------------------------------------------
*/
herr_t
-H5S_extent_copy(H5S_extent_t *dst, const H5S_extent_t *src, hbool_t copy_max)
+H5S_extent_copy_real(H5S_extent_t *dst, const H5S_extent_t *src, hbool_t copy_max)
{
unsigned u;
herr_t ret_value = SUCCEED; /* Return value */
@@ -606,7 +637,7 @@ H5S_extent_copy(H5S_extent_t *dst, const H5S_extent_t *src, hbool_t copy_max)
done:
FUNC_LEAVE_NOAPI(ret_value)
-} /* end H5S_extent_copy() */
+} /* end H5S_extent_copy_real() */
/*-------------------------------------------------------------------------
@@ -642,7 +673,7 @@ H5S_copy(const H5S_t *src, hbool_t share_selection, hbool_t copy_max)
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
/* Copy the source dataspace's extent */
- if(H5S_extent_copy(&(dst->extent), &(src->extent), copy_max) < 0)
+ if(H5S_extent_copy_real(&(dst->extent), &(src->extent), copy_max) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCOPY, NULL, "can't copy extent")
/* Copy the source dataspace's selection */
@@ -1307,14 +1338,14 @@ done:
*
*-------------------------------------------------------------------------
*/
-static herr_t
+herr_t
H5S_set_extent_simple(H5S_t *space, unsigned rank, const hsize_t *dims,
const hsize_t *max)
{
unsigned u; /* Local index variable */
herr_t ret_value = SUCCEED; /* Return value */
- FUNC_ENTER_NOAPI_NOINIT
+ FUNC_ENTER_NOAPI(FAIL)
/* Check args */
HDassert(rank <= H5S_MAX_RANK);
@@ -1520,7 +1551,7 @@ H5Sencode(hid_t obj_id, void *buf, size_t *nalloc)
if (NULL==(dspace=(H5S_t *)H5I_object_verify(obj_id, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace")
- if(H5S_encode(dspace, (unsigned char *)buf, nalloc)<0)
+ if(H5S_encode(dspace, (unsigned char **)&buf, nalloc)<0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTENCODE, FAIL, "can't encode datatype")
done:
@@ -1545,7 +1576,7 @@ done:
*-------------------------------------------------------------------------
*/
static herr_t
-H5S_encode(H5S_t *obj, unsigned char *buf, size_t *nalloc)
+H5S_encode(H5S_t *obj, unsigned char **p, size_t *nalloc)
{
size_t extent_size; /* Size of serialized dataspace extent */
hssize_t sselect_size; /* Signed size of serialized dataspace selection */
@@ -1570,28 +1601,28 @@ H5S_encode(H5S_t *obj, unsigned char *buf, size_t *nalloc)
/* Verify the size of buffer. If it's not big enough, simply return the
* right size without filling the buffer. */
- if(!buf || *nalloc < (extent_size + select_size + 1 + 1 + 1 + 4))
+ if(!*p || *nalloc < (extent_size + select_size + 1 + 1 + 1 + 4))
*nalloc = extent_size + select_size + 1 + 1 + 1 + 4;
else {
/* Encode the type of the information */
- *buf++ = H5O_SDSPACE_ID;
+ *(*p)++ = H5O_SDSPACE_ID;
/* Encode the version of the dataspace information */
- *buf++ = H5S_ENCODE_VERSION;
+ *(*p)++ = H5S_ENCODE_VERSION;
/* Encode the "size of size" information */
- *buf++ = (unsigned char)H5F_SIZEOF_SIZE(f);
+ *(*p)++ = (unsigned char)H5F_SIZEOF_SIZE(f);
/* Encode size of extent information. Pointer is actually moved in this macro. */
- UINT32ENCODE(buf, extent_size);
+ UINT32ENCODE(*p, extent_size);
/* Encode the extent part of dataspace */
- if(H5O_msg_encode(f, H5O_SDSPACE_ID, TRUE, buf, obj) < 0)
+ if(H5O_msg_encode(f, H5O_SDSPACE_ID, TRUE, *p, obj) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTENCODE, FAIL, "can't encode extent space")
- buf += extent_size;
+ *p += extent_size;
/* Encode the selection part of dataspace. */
- if(H5S_SELECT_SERIALIZE(obj, &buf) < 0)
+ if(H5S_SELECT_SERIALIZE(obj, p) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTENCODE, FAIL, "can't encode select space")
} /* end else */
@@ -1632,7 +1663,7 @@ H5Sdecode(const void *buf)
if(buf == NULL)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "empty buffer")
- if((ds = H5S_decode((const unsigned char *)buf)) == NULL)
+ if((ds = H5S_decode((const unsigned char **)&buf)) == NULL)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTDECODE, FAIL, "can't decode object")
/* Register the type and return the ID */
@@ -1661,7 +1692,7 @@ done:
*-------------------------------------------------------------------------
*/
static H5S_t*
-H5S_decode(const unsigned char *buf)
+H5S_decode(const unsigned char **p)
{
H5S_t *ds;
H5S_extent_t *extent;
@@ -1673,28 +1704,28 @@ H5S_decode(const unsigned char *buf)
FUNC_ENTER_NOAPI_NOINIT
/* Decode the type of the information */
- if(*buf++ != H5O_SDSPACE_ID)
+ if(*(*p)++ != H5O_SDSPACE_ID)
HGOTO_ERROR(H5E_DATASPACE, H5E_BADMESG, NULL, "not an encoded dataspace")
/* Decode the version of the dataspace information */
- if(*buf++ != H5S_ENCODE_VERSION)
+ if(*(*p)++ != H5S_ENCODE_VERSION)
HGOTO_ERROR(H5E_DATASPACE, H5E_VERSION, NULL, "unknown version of encoded dataspace")
/* Decode the "size of size" information */
- sizeof_size = *buf++;
+ sizeof_size = *(*p)++;
/* Allocate "fake" file structure */
if(NULL == (f = H5F_fake_alloc(sizeof_size)))
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTALLOC, NULL, "can't allocate fake file struct")
/* Decode size of extent information */
- UINT32DECODE(buf, extent_size);
+ UINT32DECODE(*p, extent_size);
/* Decode the extent part of dataspace */
/* (pass mostly bogus file pointer and bogus DXPL) */
- if((extent = (H5S_extent_t *)H5O_msg_decode(f, H5P_DEFAULT, NULL, H5O_SDSPACE_ID, buf))==NULL)
+ if((extent = (H5S_extent_t *)H5O_msg_decode(f, H5P_DEFAULT, NULL, H5O_SDSPACE_ID, *p))==NULL)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTDECODE, NULL, "can't decode object")
- buf += extent_size;
+ *p += extent_size;
/* Copy the extent into dataspace structure */
if((ds = H5FL_CALLOC(H5S_t))==NULL)
@@ -1710,7 +1741,7 @@ H5S_decode(const unsigned char *buf)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTSET, NULL, "unable to set all selection")
/* Decode the select part of dataspace. I believe this part always exists. */
- if(H5S_SELECT_DESERIALIZE(&ds, &buf) < 0)
+ if(H5S_SELECT_DESERIALIZE(&ds, p) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTDECODE, NULL, "can't decode space selection")
/* Set return value */
diff --git a/src/H5Spkg.h b/src/H5Spkg.h
index 0f2adf1..933de64 100644
--- a/src/H5Spkg.h
+++ b/src/H5Spkg.h
@@ -245,7 +245,7 @@ H5_DLLVAR const H5S_select_class_t H5S_sel_point[1];
/* Extent functions */
H5_DLL herr_t H5S_extent_release(H5S_extent_t *extent);
-H5_DLL herr_t H5S_extent_copy(H5S_extent_t *dst, const H5S_extent_t *src,
+H5_DLL herr_t H5S_extent_copy_real(H5S_extent_t *dst, const H5S_extent_t *src,
hbool_t copy_max);
/* Operations on selections */
diff --git a/src/H5Sprivate.h b/src/H5Sprivate.h
index 54c70f0..cccfd6d 100644
--- a/src/H5Sprivate.h
+++ b/src/H5Sprivate.h
@@ -190,6 +190,8 @@ H5_DLL herr_t H5S_append(H5F_t *f, hid_t dxpl_id, struct H5O_t *oh, H5S_t *ds);
H5_DLL H5S_t *H5S_read(const struct H5O_loc_t *loc, hid_t dxpl_id);
H5_DLL htri_t H5S_set_extent(H5S_t *space, const hsize_t *size);
H5_DLL herr_t H5S_set_extent_real(H5S_t *space, const hsize_t *size);
+H5_DLL herr_t H5S_set_extent_simple(H5S_t *space, unsigned rank,
+ const hsize_t *dims, const hsize_t *max);
H5_DLL H5S_t *H5S_create(H5S_class_t type);
H5_DLL H5S_t *H5S_create_simple(unsigned rank, const hsize_t dims[/*rank*/],
const hsize_t maxdims[/*rank*/]);
diff --git a/src/H5Spublic.h b/src/H5Spublic.h
index 37d3866..721c4bf 100644
--- a/src/H5Spublic.h
+++ b/src/H5Spublic.h
@@ -25,7 +25,7 @@
/* Define atomic datatypes */
#define H5S_ALL (hid_t)0
-#define H5S_UNLIMITED ((hsize_t)(hssize_t)(-1))
+#define H5S_UNLIMITED HSIZE_UNDEF
/* Define user-level maximum number of dimensions */
#define H5S_MAX_RANK 32
diff --git a/src/H5Sselect.c b/src/H5Sselect.c
index a9c0aa1..153c691 100644
--- a/src/H5Sselect.c
+++ b/src/H5Sselect.c
@@ -482,9 +482,14 @@ H5S_select_deserialize(H5S_t **space, const uint8_t **p)
/* Decode the rank of the point selection */
UINT32DECODE(*p,rank);
- if(!*space)
+ if(!*space) {
+ hsize_t dims[H5S_MAX_RANK];
+
/* Patch the rank of the allocated dataspace */
- tmp_space->extent.rank = rank;
+ (void)HDmemset(dims, 0, (size_t)rank * sizeof(dims[0]));
+ if(H5S_set_extent_simple(tmp_space, rank, dims, NULL) < 0)
+ HGOTO_ERROR(H5E_DATASPACE, H5E_CANTINIT, FAIL, "can't set dimensions")
+ } /* end if */
else
/* Verify the rank of the provided dataspace */
if(rank != tmp_space->extent.rank)
diff --git a/src/H5public.h b/src/H5public.h
index e1fdd9e..1c617d1 100644
--- a/src/H5public.h
+++ b/src/H5public.h
@@ -176,6 +176,7 @@ H5_GCC_DIAG_ON(long-long)
#else
# error "nothing appropriate for hsize_t"
#endif
+#define HSIZE_UNDEF ((hsize_t)(hssize_t)(-1))
/*
* File addresses have their own types.