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authorPedro Vicente Nunes <pvn@hdfgroup.org>2001-06-06 21:14:06 (GMT)
committerPedro Vicente Nunes <pvn@hdfgroup.org>2001-06-06 21:14:06 (GMT)
commitbdac44941a555f2700f71bad4a42e45c5a992cb7 (patch)
tree81b84c53685fc38b9763efa280711755c9ec83a7 /src
parentcd27d475860e7fda25f3844357043ed308ef446f (diff)
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[svn-r3970] my first hdf5 library contribution
Diffstat (limited to 'src')
-rwxr-xr-xsrc/H5Image.c622
-rwxr-xr-xsrc/H5Image.h172
-rwxr-xr-xsrc/H5lite.c550
-rwxr-xr-xsrc/H5lite.h54
4 files changed, 1398 insertions, 0 deletions
diff --git a/src/H5Image.c b/src/H5Image.c
new file mode 100755
index 0000000..65b33f4
--- /dev/null
+++ b/src/H5Image.c
@@ -0,0 +1,622 @@
+/****************************************************************************
+ * NCSA HDF *
+ * Scientific Data Technologies *
+ * National Center for Supercomputing Applications *
+ * University of Illinois at Urbana-Champaign *
+ * 605 E. Springfield, Champaign IL 61820 *
+ * *
+ * For conditions of distribution and use, see the accompanying *
+ * hdf/COPYING file. *
+ * *
+ ****************************************************************************/
+
+#include <hdf5.h>
+
+#include "H5Lite.h"
+#include "H5Image.h"
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5IMmake_image
+ *
+ * Purpose:
+ *
+ * Return: Success: 0, Failure: -1
+ *
+ * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+ *
+ * Date: May 01, 2001
+ *
+ * Comments:
+ * based on HDF5 Image and Palette Specification
+ * http://hdf.ncsa.uiuc.edu/HDF5/H5Image/ImageSpec.html
+ *
+ * The two required attributes that identify the data as an image are
+ * the name="CLASS" with the value of "IMAGE", and the name="VERSION"
+ * with the current value of "1.2"
+ *
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+
+
+herr_t H5IMmake_image( hid_t loc_id,
+ const char *dset_name,
+ const hsize_t *dims,
+ hid_t plist_id,
+ const void *buffer )
+{
+
+ char *attr_name[] = {"CLASS","IMAGE_VERSION"};
+ char *attr_data[] = {"IMAGE","1.2"};
+ int rank;
+ herr_t status;
+ const H5IM_imageinfo_t *imageinfo;
+
+ if ( plist_id == H5IM_8BIT )
+ {
+ imageinfo = &H5IM_create_dflt8bit;
+ rank = 2;
+ }
+ else
+ {
+ /*to do */
+ }
+
+ /* First we make the dataset */
+ status = H5Lmake_dataset( loc_id, dset_name, rank, dims, H5T_NATIVE_UCHAR, H5T_NATIVE_UCHAR, buffer );
+
+ /* Then we attach the required attributes */
+
+ /* Attach the CLASS attribute */
+ status = H5Lattach_attribute( loc_id, dset_name, attr_name[0], attr_data[0] );
+
+ /* Attach the VERSION attribute */
+ status = H5Lattach_attribute( loc_id, dset_name, attr_name[1], attr_data[1] );
+
+ /* Attach the IMAGE_SUBCLASS attribute */
+ status = H5Lattach_attribute( loc_id, dset_name, "IMAGE_SUBCLASS", imageinfo->subclass );
+
+ /* Attach the INTERLACE_MODE attribute. This attribute is only for true color images*/
+ if ( rank == 3 )
+ status = H5Lattach_attribute( loc_id, dset_name, "INTERLACE_MODE", imageinfo->interlace );
+
+
+ /* We now attach the optional attributes */
+
+ /* Attach the IMAGE_COLORMODEL attribute */
+ status = H5Lattach_attribute( loc_id, dset_name, "IMAGE_COLORMODEL", imageinfo->color_model );
+
+
+ return status;
+}
+
+
+
+
+
+
+
+
+#if 0
+
+
+
+
+
+herr_t H5Lmake_image( hid_t loc_id,
+ const char *dset_name,
+ const hsize_t *dims,
+ hid_t file_type_id,
+ hid_t mem_type_id,
+ const void *buffer,
+ H5L_imageinfo_t imageinfo )
+{
+
+ char *attr_name[] = {"CLASS","IMAGE_VERSION"};
+ char *attr_data[] = {"IMAGE","1.2"};
+ char attr_color[20];
+ char attr_subclass[20];
+ char attr_interlace[20];
+ herr_t status;
+ int rank;
+
+ /* First we find the type of image. Version 1.2 only supports indexed and true color images.
+ * Indexed images are stored as 2D datasets, true color images are stored as 3D datasets,
+ * with the third dimension defining the number of color planes in the image.
+ */
+
+ switch ( imageinfo.subclass )
+ {
+ case H5L_IMAGE_GRAYSCALE:
+ strcpy(attr_subclass,"IMAGE_GRAYSCALE");
+ return FAIL;
+ break;
+ case H5L_IMAGE_BITMAP:
+ strcpy(attr_subclass,"IMAGE_BITMAP");
+ return FAIL;
+ break;
+ case H5L_IMAGE_TRUECOLOR:
+ strcpy(attr_subclass,"IMAGE_TRUECOLOR");
+ rank = 3;
+ break;
+ case H5L_IMAGE_INDEXED:
+ strcpy(attr_subclass,"IMAGE_INDEXED");
+ rank = 2;
+ break;
+ default:
+ return FAIL;
+ };
+
+
+ /* Find the interlace mode */
+
+ switch ( imageinfo.interlace )
+ {
+ case H5L_INTERLACE_PIXEL:
+ strcpy(attr_interlace,"INTERLACE_PIXEL");
+ break;
+ case H5L_INTERLACE_PLANE:
+ strcpy(attr_interlace,"INTERLACE_PLANE");
+ break;
+ case H5L_INTERLACE_LINE:
+ strcpy(attr_interlace,"INTERLACE_LINE");
+ break;
+ };
+
+
+
+ /* Make the dataset */
+ status = H5Lmake_dataset( loc_id, dset_name, rank, dims, file_type_id, mem_type_id, buffer );
+
+ /* Then we attach the required attributes */
+
+ /* Attach the CLASS attribute */
+ status = H5Lattach_attribute( loc_id, dset_name, attr_name[0], attr_data[0] );
+
+ /* Attach the VERSION attribute */
+ status = H5Lattach_attribute( loc_id, dset_name, attr_name[1], attr_data[1] );
+
+ /* Attach the IMAGE_SUBCLASS attribute */
+ status = H5Lattach_attribute( loc_id, dset_name, "IMAGE_SUBCLASS", attr_subclass );
+
+ /* Attach the INTERLACE_MODE attribute. This attribute is only for true color images*/
+ if ( rank == 3 )
+ status = H5Lattach_attribute( loc_id, dset_name, "INTERLACE_MODE", attr_interlace );
+
+
+ /* We now attach the optional attributes */
+
+
+ /* Image color model atrribute */
+
+ switch ( imageinfo.color_model )
+ {
+ case H5L_MODEL_RGB:
+ strcpy(attr_color,"RGB");
+ break;
+ case H5L_MODEL_YUV:
+ strcpy(attr_color,"YUV");
+ break;
+ case H5L_MODEL_CMY:
+ strcpy(attr_color,"CMY");
+ break;
+ case H5L_MODEL_CMYK:
+ strcpy(attr_color,"CMYK");
+ case H5L_MODEL_YCBCR:
+ strcpy(attr_color,"YCbCr");
+ break;
+ case H5L_MODEL_HSV:
+ strcpy(attr_color,"HSV");
+ break;
+ default:
+ return FAIL;
+ };
+
+ /* Attach the IMAGE_COLORMODEL attribute */
+ status = H5Lattach_attribute( loc_id, dset_name, "IMAGE_COLORMODEL", attr_color );
+
+ return status;
+}
+
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5Lmake_image_indexed
+ *
+ * Purpose:
+ *
+ * Return: Success: 0, Failure: -1
+ *
+ * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+ *
+ * Date: May 01, 2001
+ *
+ * Comments:
+ *
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+
+
+herr_t H5Lmake_image_indexed( hid_t loc_id,
+ const char *dset_name,
+ const hsize_t *dims,
+ hid_t file_type_id,
+ hid_t mem_type_id,
+ const void *buffer )
+{
+
+ H5L_imageinfo_t imageinfo;
+ herr_t status;
+
+ /* Initialize the image info for an indexed, RGB color model image */
+
+ imageinfo.subclass = H5L_IMAGE_INDEXED;
+ imageinfo.interlace = H5L_INTERLACE_PIXEL;
+ imageinfo.white_is_zero = -1;
+ imageinfo.minmax[0] = -1;
+ imageinfo.minmax[1] = -1;
+ imageinfo.bkindex = -1;
+ imageinfo.trindex = -1;
+ imageinfo.aspect_ratio = -1;
+ imageinfo.color_model = H5L_MODEL_RGB;
+ imageinfo.gamma_correction = -1;
+
+
+ /* Make the image dataset */
+ status = H5Lmake_image( loc_id, dset_name, dims, file_type_id, mem_type_id,
+ buffer, imageinfo );
+
+ return status;
+}
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5Lmake_image_truecolor
+ *
+ * Purpose:
+ *
+ * Return: Success: 0, Failure: -1
+ *
+ * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+ *
+ * Date: May 01, 2001
+ *
+ * Comments:
+ *
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+
+
+herr_t H5Lmake_image_truecolor( hid_t loc_id,
+ const char *dset_name,
+ const hsize_t *dims,
+ hid_t file_type_id,
+ hid_t mem_type_id,
+ const void *buffer )
+{
+
+ H5L_imageinfo_t imageinfo;
+ herr_t status;
+
+ /* Initialize the image info for a true color, RGB color model image */
+
+ imageinfo.subclass = H5L_IMAGE_TRUECOLOR;
+ imageinfo.interlace = H5L_INTERLACE_PIXEL;
+ imageinfo.white_is_zero = -1;
+ imageinfo.minmax[0] = -1;
+ imageinfo.minmax[1] = -1;
+ imageinfo.bkindex = -1;
+ imageinfo.trindex = -1;
+ imageinfo.aspect_ratio = -1;
+ imageinfo.color_model = H5L_MODEL_RGB;
+ imageinfo.gamma_correction = -1;
+
+
+ /* Make the image dataset */
+ status = H5Lmake_image( loc_id, dset_name, dims, file_type_id, mem_type_id,
+ buffer, imageinfo );
+
+ return status;
+}
+
+
+
+
+/*-------------------------------------------------------------------------
+ * Function: find_palette
+ *
+ * Purpose: operator function used by H5L_find_palette
+ *
+ * Return:
+ *
+ * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+ *
+ * Date: May 28, 2001
+ *
+ * Comments:
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+
+static herr_t find_palette( hid_t UNUSED loc_id, const char *name, void *op_data)
+{
+
+ /* Define a default zero value for return. This will cause the iterator to continue if
+ * the palette attribute is not found yet.
+ */
+
+ int ret = 0;
+
+ /* Define a positive value for return value if the attribute was found. This will
+ * cause the iterator to immediately return that positive value,
+ * indicating short-circuit success
+ */
+
+ if( HDstrcmp( name, "PALETTE" ) == 0 )
+ ret = 1;
+
+
+ return ret;
+}
+
+
+
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5L_find_palette
+ *
+ * Purpose: Find the atrribute "PALETTE" in the image dataset
+ *
+ * Return: Success: 1, Failure: 0
+ *
+ * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+ *
+ * Date: May 11, 2001
+ *
+ * Comments:
+ * The function uses H5Aiterate with the operator function find_palette
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+
+herr_t H5L_find_palette( hid_t loc_id )
+{
+
+ unsigned int attr_num; /* Starting attribute to look up */
+ herr_t ret;
+
+ attr_num = 0;
+ ret = H5Aiterate( loc_id, &attr_num, find_palette, 0 );
+
+ return ret;
+}
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5Lattach_palette
+ *
+ * Purpose: This function attaches a palette to an existing image dataset
+ *
+ * Return: Success: 0, Failure: -1
+ *
+ * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+ *
+ * Date: May 01, 2001
+ *
+ * Comments:
+ * based on HDF5 Image and Palette Specification
+ * http://hdf.ncsa.uiuc.edu/HDF5/H5Image/ImageSpec.html
+ *
+ * An image (dataset) within an HDF5 file may optionally specify an array of
+ * palettes to be viewed with. The dataset will have an attribute
+ * which contains an array of object reference pointers which refer to palettes in the file.
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+
+
+herr_t H5Lattach_palette( hid_t loc_id,
+ const char *image_name,
+ const char *pal_name,
+ const hsize_t *pal_dims,
+ hid_t file_type_id,
+ hid_t mem_type_id,
+ const void *pal_data,
+ H5L_colormodel_t color_model,
+ H5L_palette_t palette_t,
+ const char *rangeindex,
+ const void *minmax )
+
+{
+
+ char *attr_name[] = {"CLASS","PAL_COLORMODEL","PAL_TYPE","RANGE_INDEX",
+ "PAL_MINMAXNUMERIC","PAL_VERSION"};
+ hid_t image_id;
+ hid_t attr_type;
+ hid_t attr_id;
+ hid_t attr_space_id;
+ herr_t status;
+ hid_t attr_class;
+ hobj_ref_t ref; /* write a new reference */
+ hobj_ref_t *refbuf; /* buffer to read references */
+ hssize_t n_refs;
+ hsize_t dim_ref;
+ char attr_color[5];
+ char attr_paltype[11];
+ int ok_pal;
+
+ switch ( color_model )
+ {
+ case H5L_MODEL_RGB:
+ strcpy(attr_color,"RGB");
+ break;
+ case H5L_MODEL_YUV:
+ strcpy(attr_color,"YUV");
+ break;
+ case H5L_MODEL_CMY:
+ strcpy(attr_color,"CMY");
+ break;
+ case H5L_MODEL_CMYK:
+ strcpy(attr_color,"CMYK");
+ break;
+ case H5L_MODEL_YCBCR:
+ strcpy(attr_color,"YCbCr");
+ break;
+ case H5L_MODEL_HSV:
+ strcpy(attr_color,"HSV");
+ break;
+ default:
+ return FAIL;
+ };
+
+ switch ( palette_t )
+ {
+ case H5L_PAL_STANDARD:
+ strcpy(attr_paltype,"STANDARD8");
+ break;
+ case H5L_PAL_RANGEINDEX:
+ strcpy(attr_paltype,"RANGEINDEX");
+ break;
+ default:
+ return FAIL;
+ };
+
+
+ /* First we create the palette dataset and attach to it the required attributes
+ * that identify it as a palette
+ */
+
+ /* Make the palette dataset. The palette is created on the same local id. */
+ status = H5Lmake_dataset( loc_id, pal_name, 2, pal_dims, file_type_id, mem_type_id, pal_data );
+
+ /* Attach the attribute "CLASS" to the >>palette<< dataset*/
+ status = H5Lattach_attribute( loc_id, pal_name, attr_name[0], "PALETTE" );
+
+ /* Attach the attribute "PAL_COLORMODEL" to the >>palette<< dataset*/
+ status = H5Lattach_attribute( loc_id, pal_name, attr_name[1], attr_color );
+
+ /* Attach the attribute "PAL_TYPE" to the >>palette<< dataset*/
+ status = H5Lattach_attribute( loc_id, pal_name, attr_name[2], attr_paltype );
+
+ /* Attach the attribute "PAL_VERSION" to the >>palette<< dataset*/
+ status = H5Lattach_attribute( loc_id, pal_name, attr_name[5], "1.2" );
+
+ /* The image dataset may or not have the attribute "PALETTE"
+ * First we try to open to see if it is already there; if not, it is created.
+ * If it exists, the array of references is extended to hold the reference
+ * to the new palette
+ */
+
+ /* First we get the image id */
+ image_id = H5Dopen( loc_id, image_name );
+
+ /* Try to find the attribute "PALETTE" on the >>image<< dataset */
+ ok_pal = H5L_find_palette( image_id );
+
+ /* It does not exist. We create the attribute and one reference */
+ if ( ok_pal <= 0 )
+ {
+
+ attr_space_id = H5Screate( H5S_SCALAR );
+
+ /* Create the attribute type for the reference */
+ attr_type = H5Tcopy( H5T_STD_REF_OBJ );
+
+ /* Create the attribute "PALETTE" to be attached to the image*/
+ attr_id = H5Acreate( image_id, "PALETTE", attr_type, attr_space_id, H5P_DEFAULT );
+
+ /* Create a reference. The reference is created on the local id. */
+ status = H5Rcreate( &ref, loc_id, pal_name, H5R_OBJECT, -1 );
+
+ /* Write the attribute with the reference */
+ status = H5Awrite( attr_id, attr_type, &ref );
+
+ status = H5Sclose( attr_space_id );
+
+ }
+
+ /* The attribute already exists, open it */
+
+ else if ( ok_pal == 1 )
+
+ {
+
+ attr_id = H5Aopen_name( image_id, "PALETTE" );
+
+ attr_type = H5Aget_type( attr_id );
+
+ attr_class = H5Tget_class( attr_type );
+
+ /* Check if it is really a reference */
+
+ if ( attr_class == H5T_REFERENCE )
+ {
+
+ /* Get and save the old reference(s) */
+
+ attr_space_id = H5Aget_space( attr_id );
+
+ n_refs = H5Sget_simple_extent_npoints( attr_space_id );
+
+ dim_ref = n_refs + 1;
+
+ refbuf = malloc( sizeof(hobj_ref_t) * (int)dim_ref );
+
+ status = H5Aread( attr_id, attr_type, refbuf );
+
+ status = H5Sclose( attr_space_id );
+
+ /* The attribute must be deleted, in order to the new one can reflect the changes*/
+ status = H5Adelete( image_id, "PALETTE" );
+
+ /* Create a new reference for this palette. */
+ status = H5Rcreate( &ref, loc_id, pal_name, H5R_OBJECT, -1 );
+
+ refbuf[n_refs] = ref;
+
+ /* Create the data space for the new references */
+ attr_space_id = H5Screate_simple( 1, &dim_ref, NULL );
+
+ /* Create the attribute again with the changes of space */
+ attr_id = H5Acreate( image_id, "PALETTE", attr_type, attr_space_id, H5P_DEFAULT );
+
+ /* Write the attribute with the new references */
+ status = H5Awrite( attr_id, attr_type, refbuf );
+
+ status = H5Sclose( attr_space_id );
+
+ free( refbuf );
+
+ } /* H5T_REFERENCE */
+
+ status = H5Tclose( attr_type );
+
+ /* Close the attribute. */
+ status = H5Aclose( attr_id );
+
+ }
+
+ /* Close the image dataset. */
+ status = H5Dclose( image_id );
+
+ return status;
+}
+
+
+#endif
diff --git a/src/H5Image.h b/src/H5Image.h
new file mode 100755
index 0000000..990fb7e
--- /dev/null
+++ b/src/H5Image.h
@@ -0,0 +1,172 @@
+
+/****************************************************************************
+ * NCSA HDF *
+ * Scientific Data Technologies *
+ * National Center for Supercomputing Applications *
+ * University of Illinois at Urbana-Champaign *
+ * 605 E. Springfield, Champaign IL 61820 *
+ * *
+ * For conditions of distribution and use, see the accompanying *
+ * hdf/COPYING file. *
+ * *
+ ****************************************************************************/
+
+
+#ifndef _H5Image_H
+#define _H5Image_H
+
+
+
+/* HDF5 image information */
+typedef struct H5IM_imageinfo_t
+{
+ char subclass[20]; /* Image subclass */
+ char color_model[20]; /* Color model */
+ char interlace[20]; /* Interlace mode */
+ int white_is_zero; /* For grayscale, bitmap images */
+ int minmax[2]; /* Minimum, maximum value of data */
+ int bkindex; /* Index of the background color */
+ int trindex; /* Index of the transparent color */
+ int aspect_ratio; /* Aspect ratio */
+ float gamma_correction; /* Gamma correction */
+} H5IM_imageinfo_t;
+
+
+
+
+/* Default Template identifier for 8bit images */
+#define H5IM_8BIT 0
+
+
+/* Default struct H5L_imageinfo_t for 8bit images */
+static const H5IM_imageinfo_t H5IM_create_dflt8bit =
+{
+
+ "IMAGE_INDEXED", /* Image subclass */
+ "RGB", /* Color model */
+ "", /* Interlace mode */
+ -1, /* white_is_zero */
+ {-1,-1}, /* Minimum, maximum value of data */
+ -1, /* Index of the background color */
+ -1, /* Index of the transparent color */
+ -1, /* Aspect ratio */
+ -1 /* Gamma correction */
+};
+
+
+
+
+herr_t H5IMmake_image( hid_t loc_id,
+ const char *dset_name,
+ const hsize_t *dims,
+ hid_t plist_id,
+ const void *buffer );
+
+/*********************** OLD *****************************/
+
+
+#if 0
+
+#define H5L_NORANGEINDEX 0
+#define H5L_NOMINMAX 0
+
+
+
+/* HDF5 image subclass */
+typedef enum H5L_imagesc_t
+{
+ H5L_IMAGE_GRAYSCALE,
+ H5L_IMAGE_BITMAP,
+ H5L_IMAGE_TRUECOLOR,
+ H5L_IMAGE_INDEXED
+} H5L_imagesc_t;
+
+
+
+/* HDF5 image/palette color models */
+typedef enum H5L_colormodel_t
+{
+ H5L_MODEL_RGB = 0, /*RGB */
+ H5L_MODEL_YUV = 1, /*YUV */
+ H5L_MODEL_CMY = 2, /*CMY */
+ H5L_MODEL_CMYK = 3, /*CMYK */
+ H5L_MODEL_YCBCR = 4, /*YCbCr */
+ H5L_MODEL_HSV = 5, /*HSV */
+} H5L_colormodel_t;
+
+
+/* HDF5 image interlace mode */
+typedef enum H5L_interlace_t
+{
+ H5L_NOT_DEFINED = -1,
+ H5L_INTERLACE_PIXEL = 0,
+ H5L_INTERLACE_PLANE = 1,
+ H5L_INTERLACE_LINE = 2
+} H5L_interlace_t;
+
+
+
+/* HDF5 palette types */
+typedef enum H5L_palette_t
+{
+ H5L_PAL_STANDARD,
+ H5L_PAL_RANGEINDEX
+} H5L_palette_t;
+
+
+
+
+
+/* HDF5 image information */
+typedef struct H5L_imageinfo_t
+{
+ H5L_imagesc_t subclass; /* Image subclass */
+ H5L_interlace_t interlace; /* Interlace mode */
+ int white_is_zero; /* For grayscale, bitmap images */
+ int minmax[2]; /* Minimum, maximum value of data */
+ int bkindex; /* Index of the background color */
+ int trindex; /* Index of the transparent color */
+ int aspect_ratio; /* Aspect ratio */
+ H5L_colormodel_t color_model; /* Color model */
+ float gamma_correction;/* Gamma correction */
+} H5L_imageinfo_t;
+
+
+
+herr_t H5Lmake_image( hid_t loc_id,
+ const char *dset_name,
+ const hsize_t *dims,
+ hid_t file_type_id,
+ hid_t mem_type_id,
+ const void *buffer,
+ H5L_imageinfo_t imageinfo );
+
+herr_t H5Lmake_image_indexed( hid_t loc_id,
+ const char *dset_name,
+ const hsize_t *dims,
+ hid_t file_type_id,
+ hid_t mem_type_id,
+ const void *buffer );
+
+herr_t H5Lmake_image_truecolor( hid_t loc_id,
+ const char *dset_name,
+ const hsize_t *dims,
+ hid_t file_type_id,
+ hid_t mem_type_id,
+ const void *buffer );
+
+herr_t H5Lattach_palette( hid_t loc_id,
+ const char *image_name,
+ const char *pal_name,
+ const hsize_t *pal_dims,
+ hid_t file_type_id,
+ hid_t mem_type_id,
+ const void *pal_data,
+ H5L_colormodel_t color_model,
+ H5L_palette_t palette_t,
+ const char *rangeindex,
+ const void *minmax );
+
+#endif
+
+#endif
diff --git a/src/H5lite.c b/src/H5lite.c
new file mode 100755
index 0000000..0dbb786
--- /dev/null
+++ b/src/H5lite.c
@@ -0,0 +1,550 @@
+/****************************************************************************
+ * NCSA HDF *
+ * Scientific Data Technologies *
+ * National Center for Supercomputing Applications *
+ * University of Illinois at Urbana-Champaign *
+ * 605 E. Springfield, Champaign IL 61820 *
+ * *
+ * For conditions of distribution and use, see the accompanying *
+ * hdf/COPYING file. *
+ * *
+ ****************************************************************************/
+
+#include <hdf5.h>
+
+#include "H5Lite.h"
+
+/*local operator functions */
+
+static herr_t count_groups( hid_t UNUSED loc_id, const char *name, void *op_data);
+static herr_t get_name_group ( hid_t UNUSED loc_id, const char *name, void *op_data);
+
+
+
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5Lmake_dataset
+ *
+ * Purpose:
+ *
+ * Return: Success: 0, Failure: -1
+ *
+ * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+ *
+ * Date: March 19, 2001
+ *
+ * List of arguments:
+ *
+ * hid_t loc_id
+ * IN: Identifier of the file or group to create the dataset within.
+ *
+ * const char *dset_name
+ * IN: The name of the dataset to create.
+ *
+ * int rank
+ * IN: Number of dimensions of dataspace.
+ *
+ * const hsize_t * dims
+ * IN: An array of the size of each dimension.
+ *
+ * hid_t file_type_id
+ * IN: Identifier of the datatype to use when creating the dataset.
+ *
+ * hid_t mem_space_id
+ * IN: Identifier of the memory dataspace.
+ *
+ * const void * buffer
+ * IN: Buffer with data to be written to the datsset.
+ *
+ * Comments:
+ *
+ * The specified datatype and dataspace are the datatype and dataspace of the dataset
+ * as it will exist in the file, which may be different than in application memory
+ *
+ * Modifications:
+ *
+ *
+ *-------------------------------------------------------------------------
+ */
+
+herr_t H5Lmake_dataset( hid_t loc_id,
+ const char *dset_name,
+ int rank,
+ const hsize_t *dims,
+ hid_t file_type_id,
+ hid_t mem_type_id,
+ const void *buffer )
+{
+
+ hid_t dataset_id, space_id; /* identifiers */
+ herr_t status;
+ hid_t plist;
+
+ /* Create the data space for the dataset. */
+ space_id = H5Screate_simple( rank, dims, NULL );
+
+ /* Create the dataset. */
+#if defined (RELEASE)
+ dataset_id = H5Dcreate( loc_id, dset_name, file_type_id, space_id, H5P_DEFAULT );
+#else
+ plist = H5Pcreate(H5P_DATASET_CREATE);
+ dataset_id = H5Dcreate( loc_id, dset_name, file_type_id, space_id, plist );
+#endif
+
+ /* Write the dataset only if there is data to write */
+
+ if ( buffer )
+
+ status = H5Dwrite( dataset_id, mem_type_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, buffer );
+
+ /* End access to the dataset and release resources used by it. */
+ status = H5Dclose( dataset_id );
+
+ /* Terminate access to the data space. */
+ status = H5Sclose( space_id );
+
+ return status;
+}
+
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5Lattach_attribute
+ *
+ * Purpose: This function attaches a string attribute to an existing object
+ *
+ * Return: Success: 0, Failure: -1
+ *
+ * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+ *
+ * Date: April 18, 2001
+ *
+ * Comments:
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+
+
+herr_t H5Lattach_attribute( hid_t loc_id,
+ const char *obj_name,
+ const char *attr_name,
+ const char *attr_data )
+{
+
+ /* identifiers */
+ hid_t attr_type;
+ hid_t attr_size;
+ hid_t attr_space_id;
+ hid_t attr_id;
+ hid_t obj_id;
+ herr_t status;
+ H5I_type_t type;
+
+ type = H5Iget_type( loc_id );
+
+ switch ( type )
+ {
+ case H5I_DATASET:
+ case H5I_FILE:
+
+ /* Open the dataset. */
+ obj_id = H5Dopen( loc_id, obj_name );
+ break;
+
+ case H5I_GROUP:
+
+ /* Open the group. */
+ obj_id = H5Gopen( loc_id, obj_name );
+ break;
+
+ default:
+ return FAIL;
+
+ }
+
+ /* Create the attribute */
+
+ attr_type = H5Tcopy( H5T_C_S1 );
+
+ attr_size = strlen( attr_data );
+
+ status = H5Tset_size( attr_type, (size_t)attr_size);
+
+ status = H5Tset_strpad( attr_type, H5T_STR_SPACEPAD );
+
+ attr_space_id = H5Screate( H5S_SCALAR );
+
+ attr_id = H5Acreate( obj_id, attr_name, attr_type, attr_space_id, H5P_DEFAULT );
+
+ status = H5Awrite( attr_id, attr_type, attr_data );
+
+ status = H5Sclose( attr_space_id );
+
+ status = H5Aclose( attr_id );
+
+
+ switch ( type )
+ {
+ case H5I_DATASET:
+ case H5I_FILE:
+
+ /* Close the dataset. */
+ status = H5Dclose( obj_id );
+ break;
+
+ case H5I_GROUP:
+
+ /* Close the group. */
+ status = H5Gclose( obj_id );
+ break;
+
+ }
+
+ return status;
+}
+
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5Lattach_attribute_numerical
+ *
+ * Purpose: This function attaches a numerical 1D attribute to an existing object (dataset or group)
+ *
+ * Return: Success: 0, Failure: -1
+ *
+ * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+ *
+ * Date: March 19, 2001
+ *
+ * Comments:
+ *
+ * The attribute is one dimensional
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+
+
+herr_t H5Lattach_attribute_numerical( hid_t loc_id,
+ const char *obj_name,
+ const char *attr_name,
+ hsize_t size,
+ hid_t file_type_id,
+ hid_t mem_type_id,
+ void *buffer )
+{
+
+ hid_t obj_id, space_id, attr_id; /* identifiers */
+ herr_t status;
+ H5I_type_t type;
+
+ type = H5Iget_type( loc_id );
+
+ switch ( type )
+ {
+ case H5I_DATASET:
+ case H5I_FILE:
+
+ /* Open the dataset. */
+ obj_id = H5Dopen( loc_id, obj_name );
+ break;
+
+ case H5I_GROUP:
+
+ /* Open the group. */
+ obj_id = H5Gopen( loc_id, obj_name );
+ break;
+
+ default:
+ return FAIL;
+
+ }
+
+ /* Create the data space for the attribute. */
+ space_id = H5Screate_simple( 1, &size, NULL );
+
+ /* Create the attribute. */
+ attr_id = H5Acreate( obj_id, attr_name, file_type_id, space_id, H5P_DEFAULT );
+
+ /* Write the attribute data. */
+ status = H5Awrite( attr_id, mem_type_id, buffer );
+
+ /* Close the attribute. */
+ status = H5Aclose( attr_id );
+
+ /* Close the dataspace. */
+ status = H5Sclose( space_id );
+
+ switch ( type )
+ {
+ case H5I_DATASET:
+ case H5I_FILE:
+
+ /* Close the dataset. */
+ status = H5Dclose( obj_id );
+ break;
+
+ case H5I_GROUP:
+
+ /* Close the group. */
+ status = H5Gclose( obj_id );
+ break;
+
+ }
+
+ return status;
+}
+
+
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5Lmake_groups
+ *
+ * Purpose:
+ *
+ * Return: Success: 0, Failure: -1
+ *
+ * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+ *
+ * Date: May 24, 2001
+ *
+ * Comments:
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+
+
+herr_t H5Lmake_groups( hid_t loc_id,
+ int ngroups,
+ const char *names[] )
+{
+
+ herr_t status;
+ hid_t group_id;
+ int i;
+
+ for ( i = 0; i < ngroups; i++)
+ {
+
+ /* Create the group */
+ group_id = H5Gcreate( loc_id, names[i], 0);
+
+ /* Close the group. */
+ status = H5Gclose( group_id );
+
+ }
+
+ return status;
+}
+
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5Lget_groups
+ *
+ * Purpose:
+ *
+ * Return: Success: 0, Failure: -1
+ *
+ * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+ *
+ * Date: May 24, 2001
+ *
+ * Comments:
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+
+herr_t H5Lget_groups( hid_t loc_id,
+ const char *group_name )
+{
+
+ herr_t status;
+ char name[255];
+ int i, j;
+ int ngroups;
+
+ ngroups = 0;
+
+ /* Get the number of groups */
+ status = H5Giterate( loc_id, group_name, 0, count_groups, (void *)&ngroups );
+
+ for ( i = 0; i < ngroups; i++)
+ {
+
+ j = i;
+
+ /* Get name */
+ status = H5Giterate( loc_id, group_name, &j, get_name_group, (void *)name );
+
+ printf("Name : %s\n", name);
+
+ }
+
+ return status;
+}
+
+
+/*-------------------------------------------------------------------------
+ * Function: count_groups
+ *
+ * Purpose: operator function used by H5Lget_groups
+ *
+ * Return:
+ *
+ * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+ *
+ * Date: May 28, 2001
+ *
+ * Comments:
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+
+static herr_t count_groups( hid_t UNUSED loc_id, const char *name, void *op_data)
+{
+
+ /* Define a default zero value for return. This will cause the iterator to continue */
+
+ int ret = 0;
+
+ /* Get information about object */
+
+ H5G_stat_t statbuf;
+ herr_t status;
+
+ status = H5Gget_objinfo( loc_id, name, 0, &statbuf );
+ if ( status < 0)
+ {
+ return 1; /* iterator will stop */
+ }
+
+ if ( statbuf.type == H5G_GROUP )
+ {
+ (*(int *)op_data)++;
+ }
+
+ return ret;
+
+}
+
+/*-------------------------------------------------------------------------
+ * Function: get_name_group
+ *
+ * Purpose: operator function used by H5Lget_groups
+ *
+ * Return:
+ *
+ * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+ *
+ * Date: May 28, 2001
+ *
+ * Comments:
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+
+static herr_t get_name_group( hid_t UNUSED loc_id, const char *name, void *op_data)
+{
+
+ /* Define a default 1 value for return. This will cause the iterator to break */
+
+ int ret = 1;
+
+ /* Get information about object */
+
+ H5G_stat_t statbuf;
+ herr_t status;
+
+ status = H5Gget_objinfo( loc_id, name, 0, &statbuf );
+
+ if ( statbuf.type == H5G_GROUP )
+ {
+ strcpy( (char *)op_data, name );
+ }
+
+ return ret;
+}
+
+
+
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5L_get_attributes
+ *
+ * Purpose:
+ *
+ * Return:
+ *
+ * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+ *
+ * Date: May 28, 2001
+ *
+ * Comments:
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+
+herr_t H5Lget_attributes( hid_t loc_id )
+{
+
+ hid_t attr_id;
+ hid_t type_id;
+ H5T_class_t class_type;
+ char name[255];
+ int status;
+ int n, i;
+
+ n = H5Aget_num_attrs( loc_id );
+
+ for ( i = 0; i < n; i++)
+ {
+
+ /*open id */
+ attr_id = H5Aopen_idx( loc_id, i );
+
+ /*get name */
+ H5Aget_name( attr_id, 255, name );
+
+ /*open type id */
+ type_id = H5Aget_type( attr_id );
+
+ /*get class */
+ class_type = H5Tget_class( type_id );
+
+ printf("%s\n", name );
+
+
+ /*close type id */
+ status = H5Tclose( type_id );
+
+ /*close attr id */
+ status = H5Aclose( attr_id );
+
+ }
+
+
+ return n;
+
+}
+
+
+
+
+
diff --git a/src/H5lite.h b/src/H5lite.h
new file mode 100755
index 0000000..4835b83
--- /dev/null
+++ b/src/H5lite.h
@@ -0,0 +1,54 @@
+
+/****************************************************************************
+ * NCSA HDF *
+ * Scientific Data Technologies *
+ * National Center for Supercomputing Applications *
+ * University of Illinois at Urbana-Champaign *
+ * 605 E. Springfield, Champaign IL 61820 *
+ * *
+ * For conditions of distribution and use, see the accompanying *
+ * hdf/COPYING file. *
+ * *
+ ****************************************************************************/
+
+
+#ifndef _H5Lite_H
+#define _H5Lite_H
+
+
+herr_t H5Lmake_dataset( hid_t loc_id,
+ const char *dset_name,
+ int rank,
+ const hsize_t *dims,
+ hid_t file_type_id,
+ hid_t mem_type_id,
+ const void *buffer );
+
+herr_t H5Lattach_attribute( hid_t loc_id,
+ const char *dset_name,
+ const char *attr_name,
+ const char *attr_data );
+
+
+herr_t H5Lattach_attribute_numerical( hid_t loc_id,
+ const char *dset_name,
+ const char *attr_name,
+ hsize_t dim,
+ hid_t file_type_id,
+ hid_t mem_type_id,
+ void *buffer );
+
+herr_t H5Lmake_groups( hid_t loc_id,
+ int ngroups,
+ const char *names[] );
+
+herr_t H5Lget_groups( hid_t loc_id,
+ const char *group_name );
+
+herr_t H5Lget_attributes( hid_t loc_id );
+
+
+
+
+
+#endif