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author | vchoi-hdfgroup <55293060+vchoi-hdfgroup@users.noreply.github.com> | 2023-10-25 02:48:28 (GMT) |
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committer | GitHub <noreply@github.com> | 2023-10-25 02:48:28 (GMT) |
commit | 6578c452b5d7b0db82d3cf4e58f8a2a11e909b52 (patch) | |
tree | b1ed70b41fa9cc79e96fed7a74d52af7e3cd526d /src | |
parent | fbf77a8b1620cd23e707294e22693caaf79c60ab (diff) | |
download | hdf5-6578c452b5d7b0db82d3cf4e58f8a2a11e909b52.zip hdf5-6578c452b5d7b0db82d3cf4e58f8a2a11e909b52.tar.gz hdf5-6578c452b5d7b0db82d3cf4e58f8a2a11e909b52.tar.bz2 |
Preserve MPI-I/O file hints when fapl is closed (#3755)
* Fix for issue #3025: Save the MPI info in the file struct so H5Fget_access_plist() can retrieve it from there.
Diffstat (limited to 'src')
-rw-r--r-- | src/H5Fint.c | 23 | ||||
-rw-r--r-- | src/H5Fpkg.h | 1 |
2 files changed, 19 insertions, 5 deletions
diff --git a/src/H5Fint.c b/src/H5Fint.c index 4093b4b..439fa4f 100644 --- a/src/H5Fint.c +++ b/src/H5Fint.c @@ -402,7 +402,6 @@ H5F_get_access_plist(H5F_t *f, bool app_ref) HGOTO_ERROR(H5E_FILE, H5E_CANTSET, H5I_INVALID_HID, "can't set collective metadata read flag"); if (H5F_HAS_FEATURE(f, H5FD_FEAT_HAS_MPI)) { MPI_Comm mpi_comm; - MPI_Info mpi_info; /* Retrieve and set MPI communicator */ if (MPI_COMM_NULL == (mpi_comm = H5F_mpi_get_comm(f))) @@ -410,10 +409,8 @@ H5F_get_access_plist(H5F_t *f, bool app_ref) if (H5P_set(new_plist, H5F_ACS_MPI_PARAMS_COMM_NAME, &mpi_comm) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTSET, H5I_INVALID_HID, "can't set MPI communicator"); - /* Retrieve and set MPI info object */ - if (H5P_get(old_plist, H5F_ACS_MPI_PARAMS_INFO_NAME, &mpi_info) < 0) - HGOTO_ERROR(H5E_FILE, H5E_CANTGET, H5I_INVALID_HID, "can't get MPI info object"); - if (H5P_set(new_plist, H5F_ACS_MPI_PARAMS_INFO_NAME, &mpi_info) < 0) + /* Retrieve MPI info object */ + if (H5P_set(new_plist, H5F_ACS_MPI_PARAMS_INFO_NAME, &(f->shared->mpi_info)) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTSET, H5I_INVALID_HID, "can't set MPI info object"); } #endif /* H5_HAVE_PARALLEL */ @@ -1133,6 +1130,12 @@ H5F__new(H5F_shared_t *shared, unsigned flags, hid_t fcpl_id, hid_t fapl_id, H5F /* initialize point of no return */ f->shared->point_of_no_return = false; +#ifdef H5_HAVE_PARALLEL + /* Initialize this just in case we fail before setting this field and */ + /* we try to call H5_mpi_info_free() on uninitialized memory in H5F__dest() */ + f->shared->mpi_info = MPI_INFO_NULL; +#endif /* H5_HAVE_PARALLEL */ + /* Copy the file creation and file access property lists into the * new file handle. We do this early because some values might need * to change as the file is being opened. @@ -1209,6 +1212,8 @@ H5F__new(H5F_shared_t *shared, unsigned flags, hid_t fcpl_id, hid_t fapl_id, H5F HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, NULL, "can't get collective metadata read flag"); if (H5P_get(plist, H5F_ACS_COLL_MD_WRITE_FLAG_NAME, &(f->shared->coll_md_write)) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, NULL, "can't get collective metadata write flag"); + if (H5P_get(plist, H5F_ACS_MPI_PARAMS_INFO_NAME, &(f->shared->mpi_info)) < 0) + HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, NULL, "can't set MPI info object"); #endif /* H5_HAVE_PARALLEL */ if (H5P_get(plist, H5F_ACS_META_CACHE_INIT_IMAGE_CONFIG_NAME, &(f->shared->mdc_initCacheImageCfg)) < 0) @@ -1414,6 +1419,14 @@ H5F__dest(H5F_t *f, bool flush, bool free_on_failure) f->shared->efc = NULL; } /* end if */ +#ifdef H5_HAVE_PARALLEL + if (f->shared->mpi_info != MPI_INFO_NULL) { + /* Free MPI info saved in the file struct */ + if (H5_mpi_info_free(&f->shared->mpi_info) < 0) + HDONE_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "can't free MPI info"); + } +#endif + /* With the shutdown modifications, the contents of the metadata cache * should be clean at this point, with the possible exception of the * the superblock and superblock extension. diff --git a/src/H5Fpkg.h b/src/H5Fpkg.h index bc5c90b..e81b250 100644 --- a/src/H5Fpkg.h +++ b/src/H5Fpkg.h @@ -359,6 +359,7 @@ struct H5F_shared_t { #ifdef H5_HAVE_PARALLEL H5P_coll_md_read_flag_t coll_md_read; /* Do all metadata reads collectively */ bool coll_md_write; /* Do all metadata writes collectively */ + MPI_Info mpi_info; /* MPI info */ #endif /* H5_HAVE_PARALLEL */ }; |