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author | Raymond Lu <songyulu@hdfgroup.org> | 2011-04-12 20:25:27 (GMT) |
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committer | Raymond Lu <songyulu@hdfgroup.org> | 2011-04-12 20:25:27 (GMT) |
commit | 6fc1d0535960edf24e66ca14afc27b31ec2320db (patch) | |
tree | 3b5cae467443e375c05433294137fe45c0d44717 /test/th5s.c | |
parent | 1285f6734c5916ce54104e05163b4114655d7954 (diff) | |
download | hdf5-6fc1d0535960edf24e66ca14afc27b31ec2320db.zip hdf5-6fc1d0535960edf24e66ca14afc27b31ec2320db.tar.gz hdf5-6fc1d0535960edf24e66ca14afc27b31ec2320db.tar.bz2 |
[svn-r20487] Bug 1386 - allow dimension size to be zero even though it isn't unlimited. This is a follow-up checkin for
r20440 and r20469:
1. The dataspace code has another bug - when the maximal dimension isn't passed in for H5Sset_extent_simple, it
is supposed to be same as the dimension. The current library sets NULL to it. I corrected it and added a
test case to it.
2. I corrected the tests of Fortran and C++ for this problem.
Tested on heiwa, jam, and amani.
Diffstat (limited to 'test/th5s.c')
-rw-r--r-- | test/th5s.c | 82 |
1 files changed, 54 insertions, 28 deletions
diff --git a/test/th5s.c b/test/th5s.c index 2435fc9..916feb6 100644 --- a/test/th5s.c +++ b/test/th5s.c @@ -108,7 +108,7 @@ test_h5s_basic(void) /* Output message about test being performed */ MESSAGE(5, ("Testing Dataspace Manipulation\n")); - sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL); + sid1 = H5Screate_simple(SPACE1_RANK, dims1, max2); CHECK(sid1, FAIL, "H5Screate_simple"); n = H5Sget_simple_extent_npoints(sid1); @@ -144,9 +144,9 @@ test_h5s_basic(void) VERIFY(HDmemcmp(tmax, max2, SPACE2_RANK * sizeof(hsize_t)), 0, "H5Sget_simple_extent_dims"); - /* Change max dims from zero to non-zero and back again */ - ret = H5Sset_extent_simple(sid1, SPACE1_RANK, dims1, max2); - CHECK(ret, FAIL, "H5Sset_extent_simple"); + /* Change max dims to be equal to the dimensions */ + /*ret = H5Sset_extent_simple(sid1, SPACE1_RANK, dims1, max2); + CHECK(ret, FAIL, "H5Sset_extent_simple");*/ ret = H5Sset_extent_simple(sid1, SPACE1_RANK, dims1, NULL); CHECK(ret, FAIL, "H5Sset_extent_simple"); rank = H5Sget_simple_extent_dims(sid1, tdims, tmax); @@ -523,11 +523,13 @@ test_h5s_zero_dim(void) { hid_t fid1; /* HDF5 File IDs */ hid_t sid1, attr_sid; /* Dataspace ID */ + hid_t sid_chunk; /* Dataspace ID for chunked dataset */ hid_t dset1; /* Dataset ID */ hid_t plist_id; /* Dataset creation property list */ hid_t attr; /* Attribute ID */ int rank; /* Logical rank of dataspace */ - hsize_t dims1[] = {SPACE1_DIM1, SPACE1_DIM2, SPACE1_DIM3}; + hsize_t dims1[] = {0, SPACE1_DIM2, SPACE1_DIM3}; + hsize_t max_dims[] = {SPACE1_DIM1+1, SPACE1_DIM2, SPACE1_DIM3}; hsize_t extend_dims[] = {SPACE1_DIM1, SPACE1_DIM2, SPACE1_DIM3}; hsize_t chunk_dims[] = {SPACE1_DIM1, SPACE1_DIM2/3, SPACE1_DIM3}; hsize_t tdims[SPACE1_RANK]; /* Dimension array to test with */ @@ -552,7 +554,6 @@ test_h5s_zero_dim(void) /* Make sure we can create the space with the dimension size 0 (starting from v1.8.7). * The dimension doesn't need to be unlimited. */ - dims1[0]=0; sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL); CHECK(sid1, FAIL, "H5Screate_simple"); @@ -562,6 +563,8 @@ test_h5s_zero_dim(void) sid1 = H5Screate(H5S_SIMPLE); CHECK(sid1, FAIL, "H5Screate"); + /* SID1 has the 1st dimension size as zero. The maximal dimension will be + * the same as the dimension because of the NULL passed in. */ ret = H5Sset_extent_simple(sid1,SPACE1_RANK,dims1,NULL); CHECK(ret, FAIL, "H5Sset_extent_simple"); @@ -593,6 +596,11 @@ test_h5s_zero_dim(void) nelem = H5Sget_select_npoints(sid1); VERIFY(nelem, 0, "H5Sget_select_npoints"); + /* Create the dataspace for chunked dataset with the first dimension size as zero. + * The maximal dimensions are bigger than the dimensions for later expansion. */ + sid_chunk = H5Screate_simple(SPACE1_RANK, dims1, max_dims); + CHECK(sid_chunk, FAIL, "H5Screate_simple"); + /*============================================ * Make sure we can use 0-dimension to create * contiguous, chunked, compact, and external @@ -617,7 +625,7 @@ test_h5s_zero_dim(void) wdata_real[i][j][k] = i + j + k; - /* Contiguous dataset */ + /*===================== Contiguous dataset =======================*/ dset1 = H5Dcreate2(fid1, BASICDATASET, H5T_NATIVE_INT, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); CHECK(dset1, FAIL, "H5Dcreate2"); @@ -697,14 +705,14 @@ test_h5s_zero_dim(void) ret = H5Dclose(dset1); CHECK(ret, FAIL, "H5Dclose"); - /* Chunked dataset */ + /*=================== Chunked dataset ====================*/ plist_id = H5Pcreate(H5P_DATASET_CREATE); CHECK(plist_id, FAIL, "H5Pcreate"); ret = H5Pset_chunk(plist_id, SPACE1_RANK, chunk_dims); CHECK(ret, FAIL, "H5Pset_chunk"); - dset1 = H5Dcreate2(fid1, BASICDATASET1, H5T_NATIVE_INT, sid1, H5P_DEFAULT, plist_id, H5P_DEFAULT); + dset1 = H5Dcreate2(fid1, BASICDATASET1, H5T_NATIVE_INT, sid_chunk, H5P_DEFAULT, plist_id, H5P_DEFAULT); CHECK(dset1, FAIL, "H5Dcreate2"); /* Write "nothing" to the dataset */ @@ -728,7 +736,8 @@ test_h5s_zero_dim(void) } } - /* Now extend the dataset and make sure we can write data to it */ + /* Now extend the dataset to SPACE1_DIM1*SPACE1_DIM2*SPACE1_DIM3 and make sure + * we can write data to it */ ret = H5Dset_extent(dset1, extend_dims); CHECK(ret, FAIL, "H5Dset_extent"); @@ -754,7 +763,7 @@ test_h5s_zero_dim(void) } } - /* Now shrink the dataset to 0 dimension size and make sure no data is in it */ + /* Now shrink the first dimension size of the dataset to 0 and make sure no data is in it */ extend_dims[0] = 0; ret = H5Dset_extent(dset1, extend_dims); CHECK(ret, FAIL, "H5Dset_extent"); @@ -782,7 +791,7 @@ test_h5s_zero_dim(void) ret = H5Dclose(dset1); CHECK(ret, FAIL, "H5Dclose"); - /* Compact dataset */ + /*=================== Compact dataset =====================*/ plist_id = H5Pcreate(H5P_DATASET_CREATE); CHECK(plist_id, FAIL, "H5Pcreate"); @@ -822,7 +831,7 @@ test_h5s_zero_dim(void) ret = H5Dclose(dset1); CHECK(ret, FAIL, "H5Dclose"); - /* Contiguous dataset with external storage */ + /*=========== Contiguous dataset with external storage ============*/ plist_id = H5Pcreate(H5P_DATASET_CREATE); CHECK(plist_id, FAIL, "H5Pcreate"); @@ -867,7 +876,7 @@ test_h5s_zero_dim(void) ret = H5Dclose(dset1); CHECK(ret, FAIL, "H5Dclose"); - /* Create an attribute for the file */ + /*=============== Create an attribute for the file ================*/ attr = H5Acreate2(fid1, NULLATTR, H5T_NATIVE_INT, sid1, H5P_DEFAULT, H5P_DEFAULT); CHECK(attr, FAIL, "H5Acreate2"); @@ -915,27 +924,38 @@ test_h5s_zero_dim(void) } } - /* Extend the dimension to make it a normal dataspace (3x15x13). Verify that - * data can be written to and read from the dataset now. */ - dims1[0]=3; - ret = H5Sset_extent_simple(sid1,SPACE1_RANK,dims1,NULL); + /*=============================================================== + * Extend the dimension to make it a normal dataspace (3x15x13). + * Verify that data can be written to and read from the chunked + * dataset now. + *=============================================================== + */ + dims1[0]=SPACE1_DIM1; + ret = H5Sset_extent_simple(sid_chunk,SPACE1_RANK,dims1,max_dims); CHECK(ret, FAIL, "H5Sset_extent_simple"); - nelem = H5Sget_simple_extent_npoints(sid1); + nelem = H5Sget_simple_extent_npoints(sid_chunk); CHECK(nelem, FAIL, "H5Sget_simple_extent_npoints"); VERIFY(nelem, SPACE1_DIM1 * SPACE1_DIM2 * SPACE1_DIM3, "H5Sget_simple_extent_npoints"); - rank = H5Sget_simple_extent_ndims(sid1); + rank = H5Sget_simple_extent_ndims(sid_chunk); CHECK(rank, FAIL, "H5Sget_simple_extent_ndims"); VERIFY(rank, SPACE1_RANK, "H5Sget_simple_extent_ndims"); - rank = H5Sget_simple_extent_dims(sid1, tdims, NULL); + rank = H5Sget_simple_extent_dims(sid_chunk, tdims, NULL); CHECK(rank, FAIL, "H5Sget_simple_extent_dims"); VERIFY(HDmemcmp(tdims, dims1, SPACE1_RANK * sizeof(hsize_t)), 0, "H5Sget_simple_extent_dims"); - dset1 = H5Dcreate2(fid1, BASICDATASET4, H5T_NATIVE_INT, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + /* Set it to chunked dataset */ + plist_id = H5Pcreate(H5P_DATASET_CREATE); + CHECK(plist_id, FAIL, "H5Pcreate"); + + ret = H5Pset_chunk(plist_id, SPACE1_RANK, chunk_dims); + CHECK(ret, FAIL, "H5Pset_chunk"); + + dset1 = H5Dcreate2(fid1, BASICDATASET4, H5T_NATIVE_INT, sid_chunk, H5P_DEFAULT, plist_id, H5P_DEFAULT); CHECK(dset1, FAIL, "H5Dcreate2"); ret = H5Dwrite(dset1, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, wdata_real); @@ -960,35 +980,41 @@ test_h5s_zero_dim(void) } } + ret = H5Pclose(plist_id); + CHECK(ret, FAIL, "H5Pclose"); + ret = H5Dclose(dset1); CHECK(ret, FAIL, "H5Dclose"); /* Change the dimensions to make them zero size again (0x0x0). Verify that * no element is in the dataspace. */ dims1[0]=dims1[1]=dims1[2]=0; - ret = H5Sset_extent_simple(sid1,SPACE1_RANK,dims1,NULL); + ret = H5Sset_extent_simple(sid_chunk,SPACE1_RANK,dims1,NULL); CHECK(ret, FAIL, "H5Sset_extent_simple"); /* Check that the dataspace actually has 0 elements */ - nelem = H5Sget_simple_extent_npoints(sid1); + nelem = H5Sget_simple_extent_npoints(sid_chunk); VERIFY(nelem, 0, "H5Sget_simple_extent_npoints"); /* Check that the dataspace was created with an "all" selection */ - sel_type = H5Sget_select_type(sid1); + sel_type = H5Sget_select_type(sid_chunk); VERIFY(sel_type, H5S_SEL_ALL, "H5Sget_select_type"); /* Check that the dataspace has 0 elements selected */ - nelem = H5Sget_select_npoints(sid1); + nelem = H5Sget_select_npoints(sid_chunk); VERIFY(nelem, 0, "H5Sget_select_npoints"); /* Change to "none" selection */ - ret = H5Sselect_none(sid1); + ret = H5Sselect_none(sid_chunk); CHECK(ret, FAIL, "H5Sselect_none"); /* Check that the dataspace has 0 elements selected */ - nelem = H5Sget_select_npoints(sid1); + nelem = H5Sget_select_npoints(sid_chunk); VERIFY(nelem, 0, "H5Sget_select_npoints"); + ret = H5Sclose(sid_chunk); + CHECK(ret, FAIL, "H5Sclose"); + ret = H5Sclose(sid1); CHECK(ret, FAIL, "H5Sclose"); |