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authorJacob Smith <jake.smith@hdfgroup.org>2020-03-13 22:13:17 (GMT)
committerDavid Young <dyoung@hdfgroup.org>2020-05-20 14:34:20 (GMT)
commitb11015c4ccec9384e516ca13a0a56b209b71a578 (patch)
treed140c28354788589a09ae8d6cdec116bdc5b9646 /test/use_append_chunk_mirror.c
parent333388c744626b23791298be9f9165fa5bc9d037 (diff)
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Add Splitter VFD to library.
* "Simultaneous and equivalent" Read-Write and Write-Only channels for file I/O. * Only supports drivers with the H5FD_FEAT_DEFAULT_VFD_COMPATIBLE flag for now, preventing issues with multi-file drivers. Add Mirror VFD to library. * Write-only operations over a network. * Uses TCP/IP sockets. * Server and auxiliary server-shutdown programs provided in a new directory, `utils/mirror_vfd`. * Automated testing via loopback ("remote" of localhost).
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+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the COPYING file, which can be found at the root of the source code *
+ * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
+ * If you do not have access to either file, you may request a copy from *
+ * help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/* HACKED VERSION
+ * Demonstrate SWMR with a mirrored file.
+ *
+ * Must be built with SERVER_IP as the IP address of the target system
+ * with a running mirror server, and SERVER_PORT as the primary server port.
+ *
+ * In addition to the local file, 'shinano.h5' will be created on the remote
+ * system, mirroring the local file. The file location will be local to
+ * Server's/Writer's invocation directory.
+ *
+ * Template for demonstration purposes:
+ *
+ * # Launch mirror server on remote machine (in foreground to easily stop)
+ * REMOTE(1)$ ./mirror_server /path/to/mirror_worker
+ *
+ * # Launch chunk writer with plenty of chunks.
+ * LOCAL(1)$ ./use_append_chunk_mirror -l w -n 10000
+ *
+ * # Wait one second for files to be created.
+ *
+ * # Launch chunk readers on both files.
+ * LOCAL(2)$ ./use_append_chunk_mirror -l r -n 10000
+ * REMOTE(2)$ ./use_append_chunk_mirror -l r -n 10000 -f shinano.h5
+ *
+ * # Hard-stop the server.
+ * REMOTE(1)$ ^C
+ * # alt, softer shutdown using echo and nc
+ * echo "SHUTDOWN" | nc localhost 3000
+ */
+
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Use Case 1.7 Appending a single chunk
+ * Description:
+ * Appending a single chunk of raw data to a dataset along an unlimited
+ * dimension within a pre-created file and reading the new data back.
+ * Goal:
+ * Read data appended by the Writer to a pre-existing dataset in a
+ * file. The dataset has one or more unlimited dimensions. The data is
+ * appended by a hyperslab that is contained in one chunk (for example,
+ * appending 2-dim planes along the slowest changing dimension in the
+ * 3-dim dataset).
+ * Level:
+ * User Level
+ * Guarantees:
+ * o Readers will see the modified dimension sizes after the Writer
+ * finishes HDF5 metadata updates and issues H5Fflush or H5Oflush calls.
+ * o Readers will see newly appended data after the Writer finishes
+ * the flush operation.
+ *
+ * Preconditions:
+ * o Readers are not allowed to modify the file.
+ * o All datasets that are modified by the Writer exist when the Writer
+ * opens the file.
+ * o All datasets that are modified by the Writer exist when a Reader
+ * opens the file.
+ * o Data is written by a hyperslab contained in one chunk.
+ *
+ * Main Success Scenario:
+ * 1. An application creates a file with required objects (groups,
+ * datasets, and attributes).
+ * 2. The Writer application opens the file and datasets in the file
+ * and starts adding data along the unlimited dimension using a hyperslab
+ * selection that corresponds to an HDF5 chunk.
+ * 3. A Reader opens the file and a dataset in a file, and queries
+ * the sizes of the dataset; if the extent of the dataset has changed,
+ * reads the appended data back.
+ *
+ * Discussion points:
+ * 1. Since the new data is written to the file, and metadata update
+ * operation of adding pointer to the newly written chunk is atomic and
+ * happens after the chunk is on the disk, only two things may happen
+ * to the Reader:
+ * o The Reader will not see new data.
+ * o The Reader will see all new data written by Writer.
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/* Created: Jacob Smith, 2019 */
+
+#include "use.h"
+
+/* This test uses many POSIX things that are not available on
+ * Windows. We're using a check for fork(2) here as a proxy for
+ * all POSIX/Unix/Linux things until this test can be made
+ * more platform-independent.
+ */
+#ifdef H5_HAVE_FORK
+
+#ifdef H5_HAVE_MIRROR_VFD
+
+#define THIS_PROGNAME "use_append_chunk_mirror"
+
+#define CONNECT_WITH_JELLY 0
+
+#if CONNECT_WITH_JELLY
+#define SERVER_IP "10.10.10.248" /* hard-coded IP address */
+#else
+#define SERVER_IP "127.0.0.1" /* localhost */
+#endif /* CONNECT_WITH_JELLY */
+#define SERVER_PORT 3000 /* hard-coded port number */
+#define MIRROR_FILE_NAME "shinano.h5" /* hard-coded duplicate/mirror filename */
+
+static options_t UC_opts; /* Use Case Options */
+
+/* Setup parameters for the use case.
+ * Return: 0 succeed; -1 fail.
+ */
+int
+setup_parameters(int argc, char * const argv[], options_t * opts)
+{
+ /* use case defaults */
+ HDmemset(opts, 0, sizeof(options_t));
+ opts->chunksize = Chunksize_DFT;
+ opts->use_swmr = TRUE;
+ opts->iterations = 1;
+ opts->chunkplanes = 1;
+ opts->progname = THIS_PROGNAME;
+
+ if (parse_option(argc, argv, opts) < 0)
+ return(-1);
+
+ opts->chunkdims[0] = opts->chunkplanes;
+ opts->chunkdims[1] = opts->chunkdims[2] = opts->chunksize;
+
+ opts->dims[0] = 0;
+ opts->max_dims[0] = H5S_UNLIMITED;
+ opts->dims[1] = opts->dims[2] = opts->max_dims[1] = opts->max_dims[2] = opts->chunksize;
+
+ if (opts->nplanes == 0)
+ opts->nplanes = (hsize_t)opts->chunksize;
+
+ show_parameters(opts);
+ return(0);
+} /* setup_parameters() */
+
+
+/* Overall Algorithm:
+ * Parse options from user;
+ * Generate/pre-created test files needed and close it;
+ * fork: child process becomes the reader process;
+ * while parent process continues as the writer process;
+ * both run till ending conditions are met.
+ */
+int
+main(int argc, char *argv[])
+{
+ pid_t childpid=0;
+ pid_t mypid, tmppid;
+ int child_status;
+ int child_wait_option=0;
+ int ret_value = 0;
+ int child_ret_value;
+ hbool_t send_wait = FALSE;
+ hid_t fid = -1; /* File ID */
+ H5FD_mirror_fapl_t mirr_fa;
+ H5FD_splitter_vfd_config_t split_fa;
+ hid_t mirr_fapl_id = H5I_INVALID_HID;
+
+ if (setup_parameters(argc, argv, &UC_opts) < 0) {
+ Hgoto_error(1);
+ }
+
+ mirr_fa.magic = H5FD_MIRROR_FAPL_MAGIC;
+ mirr_fa.version = H5FD_MIRROR_CURR_FAPL_T_VERSION;
+ mirr_fa.handshake_port = SERVER_PORT;
+ HDstrncpy(mirr_fa.remote_ip, SERVER_IP, H5FD_MIRROR_MAX_IP_LEN);
+
+
+ split_fa.wo_fapl_id = H5I_INVALID_HID;
+ split_fa.rw_fapl_id = H5I_INVALID_HID;
+ split_fa.magic = H5FD_SPLITTER_MAGIC;
+ split_fa.version = H5FD_CURR_SPLITTER_VFD_CONFIG_VERSION;
+ split_fa.log_file_path[0] = '\0'; /* none */
+ split_fa.ignore_wo_errs = FALSE;
+ HDstrncpy(split_fa.wo_path, MIRROR_FILE_NAME, H5FD_SPLITTER_PATH_MAX);
+
+ /* Determine the need to send/wait message file*/
+ if (UC_opts.launch == UC_READWRITE) {
+ HDunlink(WRITER_MESSAGE);
+ send_wait = TRUE;
+ }
+
+ /* ==============================================================*/
+ /* UC_READWRITE: create datafile, launch both reader and writer. */
+ /* UC_WRITER: create datafile, skip reader, launch writer. */
+ /* UC_READER: skip create, launch reader, exit. */
+ /* ==============================================================*/
+ /* =========== */
+ /* Create file */
+ /* =========== */
+ if (UC_opts.launch != UC_READER) {
+ HDprintf("Creating skeleton data file for test...\n");
+
+ /* Prepare mirror child driver */
+ mirr_fapl_id = H5Pcreate(H5P_FILE_ACCESS);
+ if (mirr_fapl_id == H5I_INVALID_HID) {
+ HDfprintf(stderr, "can't create creation mirror FAPL\n");
+ Hgoto_error(1);
+ }
+ if (H5Pset_fapl_mirror(mirr_fapl_id, &mirr_fa) < 0) {
+ HDfprintf(stderr, "can't set creation mirror FAPL\n");
+ H5Eprint2(H5E_DEFAULT, stdout);
+ Hgoto_error(1);
+ }
+
+ /* Prepare parent "splitter" driver in UC_opts */
+ split_fa.wo_fapl_id = mirr_fapl_id;
+ split_fa.rw_fapl_id = H5P_DEFAULT;
+ UC_opts.fapl_id = H5Pcreate(H5P_FILE_ACCESS);
+ if (UC_opts.fapl_id == H5I_INVALID_HID) {
+ HDfprintf(stderr, "can't create creation FAPL\n");
+ Hgoto_error(1);
+ }
+ if (H5Pset_fapl_splitter(UC_opts.fapl_id, &split_fa) < 0) {
+ HDfprintf(stderr, "can't set creation FAPL\n");
+ H5Eprint2(H5E_DEFAULT, stdout);
+ Hgoto_error(1);
+ }
+
+ if (H5Pset_libver_bounds(UC_opts.fapl_id, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) {
+ HDfprintf(stderr, "can't set creation FAPL libver bounds\n");
+ Hgoto_error(1);
+ }
+
+ /* Create file */
+ if (create_uc_file(&UC_opts) < 0) {
+ HDfprintf(stderr, "***encounter error\n");
+ Hgoto_error(1);
+ } else {
+ HDprintf("File created.\n");
+ }
+
+ /* Close FAPLs to prevent issues with forking later */
+ if (H5Pclose(UC_opts.fapl_id) < 0) {
+ HDfprintf(stderr, "can't close creation FAPL\n");
+ Hgoto_error(1);
+ }
+ UC_opts.fapl_id = H5I_INVALID_HID;
+ if (H5Pclose(mirr_fapl_id) < 0) {
+ HDfprintf(stderr, "can't close creation mirror FAPL\n");
+ Hgoto_error(1);
+ }
+ mirr_fapl_id = H5I_INVALID_HID;
+ }
+
+ /* ============ */
+ /* Fork process */
+ /* ============ */
+ if (UC_opts.launch == UC_READWRITE) {
+ if ((childpid = HDfork()) < 0) {
+ HDperror("fork");
+ Hgoto_error(1);
+ }
+ }
+ mypid = HDgetpid();
+
+ /* ============= */
+ /* launch reader */
+ /* ============= */
+ if (UC_opts.launch != UC_WRITER) {
+ /* child process -- launch the reader */
+ /* reader only opens the one file -- separate reader needed for mirrored file 'shinano.h5' */
+ if (0 == childpid) {
+ HDprintf("%d: launch reader process\n", mypid);
+
+ UC_opts.fapl_id = H5P_DEFAULT;
+ if (read_uc_file(send_wait, &UC_opts) < 0) {
+ HDfprintf(stderr, "read_uc_file encountered error (%d)\n", mypid);
+ HDexit(1);
+ }
+
+ HDexit(0);
+ }
+ }
+
+ /* ============= */
+ /* launch writer */
+ /* ============= */
+ /* this process continues to launch the writer */
+ HDprintf("%d: continue as the writer process\n", mypid);
+
+ /* Prepare mirror child driver */
+ mirr_fapl_id = H5Pcreate(H5P_FILE_ACCESS);
+ if (mirr_fapl_id == H5I_INVALID_HID) {
+ HDfprintf(stderr, "can't create creation mirror FAPL\n");
+ Hgoto_error(1);
+ }
+ if (H5Pset_fapl_mirror(mirr_fapl_id, &mirr_fa) < 0) {
+ HDfprintf(stderr, "can't set creation mirror FAPL\n");
+ H5Eprint2(H5E_DEFAULT, stdout);
+ Hgoto_error(1);
+ }
+
+ /* Prepare parent "splitter" driver in UC_opts */
+ split_fa.wo_fapl_id = mirr_fapl_id;
+ split_fa.rw_fapl_id = H5P_DEFAULT;
+ UC_opts.fapl_id = H5Pcreate(H5P_FILE_ACCESS);
+ if (UC_opts.fapl_id == H5I_INVALID_HID) {
+ HDfprintf(stderr, "can't create creation FAPL\n");
+ Hgoto_error(1);
+ }
+ if (H5Pset_fapl_splitter(UC_opts.fapl_id, &split_fa) < 0) {
+ HDfprintf(stderr, "can't set creation FAPL\n");
+ H5Eprint2(H5E_DEFAULT, stdout);
+ Hgoto_error(1);
+ }
+
+ if (UC_opts.use_swmr) {
+ if (H5Pset_libver_bounds(UC_opts.fapl_id, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) {
+ HDfprintf(stderr, "can't set write FAPL libver bounds\n");
+ Hgoto_error(1);
+ }
+ }
+
+ if ((fid = H5Fopen(UC_opts.filename, H5F_ACC_RDWR | (UC_opts.use_swmr ? H5F_ACC_SWMR_WRITE : 0), UC_opts.fapl_id)) < 0) {
+ HDfprintf(stderr, "H5Fopen failed\n");
+ Hgoto_error(1);
+ }
+
+ if (write_uc_file(send_wait, fid, &UC_opts) < 0) {
+ HDfprintf(stderr, "write_uc_file encountered error\n");
+ Hgoto_error(1);
+ }
+
+ if (H5Fclose(fid) < 0) {
+ HDfprintf(stderr, "Failed to close write\n");
+ Hgoto_error(1);
+ }
+
+ if (H5Pclose(UC_opts.fapl_id) < 0) {
+ HDfprintf(stderr, "can't close write FAPL\n");
+ Hgoto_error(1);
+ }
+
+ if (H5Pclose(mirr_fapl_id) < 0) {
+ HDfprintf(stderr, "can't close write mirror FAPL\n");
+ Hgoto_error(1);
+ }
+
+ /* ================================================ */
+ /* If readwrite, collect exit code of child process */
+ /* ================================================ */
+ if (UC_opts.launch == UC_READWRITE) {
+ if ((tmppid = HDwaitpid(childpid, &child_status, child_wait_option)) < 0) {
+ HDperror("waitpid");
+ Hgoto_error(1);
+ }
+
+ if (WIFEXITED(child_status)) {
+ if ((child_ret_value = WEXITSTATUS(child_status)) != 0) {
+ HDprintf("%d: child process exited with non-zero code (%d)\n",
+ mypid, child_ret_value);
+ Hgoto_error(2);
+ }
+ } else {
+ HDprintf("%d: child process terminated abnormally\n", mypid);
+ Hgoto_error(2);
+ }
+ }
+
+done:
+ if (ret_value != 0) {
+ HDprintf("Error(s) encountered\n");
+ } else {
+ HDprintf("All passed\n");
+ }
+
+ return(ret_value);
+}
+
+#else /* H5_HAVE_MIRROR_VFD */
+
+int
+main(void)
+{
+ HDfprintf(stderr, "Mirror VFD is not built. Skipping.\n");
+ return EXIT_SUCCESS;
+} /* end main() */
+
+#endif /* H5_HAVE_MIRROR_VFD */
+
+#else /* H5_HAVE_FORK */
+
+int
+main(void)
+{
+ HDfprintf(stderr, "Non-POSIX platform. Skipping.\n");
+ return EXIT_SUCCESS;
+} /* end main() */
+
+#endif /* H5_HAVE_FORK */
+