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authorDana Robinson <derobins@hdfgroup.org>2017-01-26 19:34:12 (GMT)
committerDana Robinson <derobins@hdfgroup.org>2017-01-26 19:34:12 (GMT)
commit2cac1c063735f2989988b279ff0233d6e9f335a3 (patch)
tree7a134078846919680b95c36d1772466793fe3da3 /test/use_common.c
parent768636dbd77ea787a6a04dfc321ff3e862791db7 (diff)
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Moved remaining SWMR-related test files to develop.
Diffstat (limited to 'test/use_common.c')
-rw-r--r--test/use_common.c653
1 files changed, 653 insertions, 0 deletions
diff --git a/test/use_common.c b/test/use_common.c
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+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the files COPYING and Copyright.html. COPYING can be found at the root *
+ * of the source code distribution tree; Copyright.html can be found at the *
+ * root level of an installed copy of the electronic HDF5 document set and *
+ * is linked from the top-level documents page. It can also be found at *
+ * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
+ * access to either file, you may request a copy from help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+#include "h5test.h"
+
+/* This test uses many POSIX things that are not available on
+ * Windows. We're using a check for fork(2) here as a proxy for
+ * all POSIX/Unix/Linux things until this test can be made
+ * more platform-independent.
+ */
+#ifdef H5_HAVE_FORK
+
+#include "use.h"
+
+#define H5D_FRIEND /*suppress error about including H5Dpkg */
+#define H5D_TESTING
+#include "H5Dpkg.h"
+
+void
+usage(const char *prog)
+{
+ HDfprintf(stderr, "usage: %s [OPTIONS]\n", prog);
+ HDfprintf(stderr, " OPTIONS\n");
+ HDfprintf(stderr, " -h, --help Print a usage message and exit\n");
+ HDfprintf(stderr, " -f FN Test file name [default: %s.h5]\n", prog);
+ HDfprintf(stderr, " -i N, --iteration=N Number of iterations to repeat the whole thing. [default: 1]\n");
+ HDfprintf(stderr, " -l w|r launch writer or reader only. [default: launch both]\n");
+ HDfprintf(stderr, " -n N, --nplanes=N Number of planes to write/read. [default: 1000]\n");
+ HDfprintf(stderr, " -s N, --swmr=N Use SWMR mode (0: no, non-0: yes) default is yes\n");
+ HDfprintf(stderr, " -z N, --chunksize=N Chunk size [default: %d]\n", Chunksize_DFT);
+ HDfprintf(stderr, " -y N, --chunkplanes=N Number of planes per chunk [default: 1]\n");
+ HDfprintf(stderr, "\n");
+} /* end usage() */
+
+/* Setup Use Case parameters by parsing command line options.
+* Setup default values if not set by options. */
+int
+parse_option(int argc, char * const argv[])
+{
+ int ret_value=0;
+ int c;
+ /* command line options: See function usage for a description */
+ const char *nagg_options = "f:hi:l:n:s:y:z:";
+
+ /* suppress getopt from printing error */
+ opterr = 0;
+
+ while (1){
+ c = getopt (argc, argv, nagg_options);
+ if (-1 == c)
+ break;
+ switch (c) {
+ case 'h':
+ usage(progname_g);
+ exit(0);
+ break;
+ case 'f': /* usecase data file name */
+ UC_opts.filename = optarg;
+ break;
+ case 'i': /* iterations */
+ if ((UC_opts.iterations = atoi(optarg)) <= 0){
+ fprintf(stderr, "bad iterations number %s, must be a positive integer\n", optarg);
+ usage(progname_g);
+ Hgoto_error(-1);
+ };
+ break;
+ case 'l': /* launch reader or writer only */
+ switch (*optarg) {
+ case 'r': /* reader only */
+ UC_opts.launch = UC_READER;
+ break;
+ case 'w': /* writer only */
+ UC_opts.launch = UC_WRITER;
+ break;
+ default:
+ fprintf(stderr, "launch value(%c) should be w or r only.\n", *optarg);
+ usage(progname_g);
+ Hgoto_error(-1);
+ break;
+ }
+ break;
+ case 'n': /* number of planes to write/read */
+ if ((UC_opts.nplanes = atoi(optarg)) <= 0){
+ fprintf(stderr, "bad number of planes %s, must be a positive integer\n", optarg);
+ usage(progname_g);
+ Hgoto_error(-1);
+ };
+ break;
+ case 's': /* use swmr file open mode */
+ if ((UC_opts.use_swmr = atoi(optarg)) < 0){
+ fprintf(stderr, "swmr value should be 0(no) or 1(yes)\n");
+ usage(progname_g);
+ Hgoto_error(-1);
+ };
+ break;
+ case 'y': /* Number of planes per chunk */
+ if ((UC_opts.chunkplanes = atoi(optarg)) <= 0){
+ fprintf(stderr, "bad number of planes per chunk %s, must be a positive integer\n", optarg);
+ usage(progname_g);
+ Hgoto_error(-1);
+ };
+ break;
+ case 'z': /* size of chunk=(z,z) */
+ if ((UC_opts.chunksize = atoi(optarg)) <= 0){
+ fprintf(stderr, "bad chunksize %s, must be a positive integer\n", optarg);
+ usage(progname_g);
+ Hgoto_error(-1);
+ };
+ break;
+ case '?':
+ fprintf(stderr, "getopt returned '%c'.\n", c);
+ Hgoto_error(-1);
+ default:
+ fprintf(stderr, "getopt returned unexpected value.\n");
+ fprintf(stderr, "Unexpected value is %d\n", c);
+ Hgoto_error(-1);
+ }
+ }
+
+ /* set test file name if not given */
+ if (!UC_opts.filename){
+ /* default data file name is <progname>.h5 */
+ if ((UC_opts.filename=(char*)HDmalloc(HDstrlen(progname_g)+4))==NULL) {
+ fprintf(stderr, "malloc: failed\n");
+ Hgoto_error(-1);
+ };
+ HDstrcpy(UC_opts.filename, progname_g);
+ HDstrcat(UC_opts.filename, ".h5");
+ }
+
+done:
+ /* All done. */
+ return(ret_value);
+}
+
+/* Show parameters used for this use case */
+void show_parameters(void){
+ printf("===Parameters used:===\n");
+ printf("chunk dims=(%llu, %llu, %llu)\n", (unsigned long long)UC_opts.chunkdims[0],
+ (unsigned long long)UC_opts.chunkdims[1], (unsigned long long)UC_opts.chunkdims[2]);
+ printf("dataset max dims=(%llu, %llu, %llu)\n", (unsigned long long)UC_opts.max_dims[0],
+ (unsigned long long)UC_opts.max_dims[1], (unsigned long long)UC_opts.max_dims[2]);
+ printf("number of planes to write=%llu\n", (unsigned long long)UC_opts.nplanes);
+ printf("using SWMR mode=%s\n", UC_opts.use_swmr ? "yes(1)" : "no(0)");
+ printf("data filename=%s\n", UC_opts.filename);
+ printf("launch part=");
+ switch (UC_opts.launch){
+ case UC_READWRITE:
+ printf("Reader/Writer\n");
+ break;
+ case UC_WRITER:
+ printf("Writer\n");
+ break;
+ case UC_READER:
+ printf("Reader\n");
+ break;
+ default:
+ /* should not happen */
+ printf("Illegal part(%d)\n", UC_opts.launch);
+ };
+ printf("number of iterations=%d (not used yet)\n", UC_opts.iterations);
+ printf("===Parameters shown===\n");
+}
+
+/* Create the skeleton use case file for testing.
+ * It has one 3d dataset using chunked storage.
+ * The dataset is (unlimited, chunksize, chunksize).
+ * Dataset type is 2 bytes integer.
+ * It starts out "empty", i.e., first dimension is 0.
+ *
+ * Return: 0 succeed; -1 fail.
+ */
+int create_uc_file(void)
+{
+ hsize_t dims[3]; /* Dataset starting dimensions */
+ hid_t fid; /* File ID for new HDF5 file */
+ hid_t dcpl; /* Dataset creation property list */
+ hid_t sid; /* Dataspace ID */
+ hid_t dsid; /* Dataset ID */
+ hid_t fapl; /* File access property list */
+ H5D_chunk_index_t idx_type; /* Chunk index type */
+
+ /* Create the file */
+ if((fapl = h5_fileaccess()) < 0)
+ return -1;
+ if(H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0)
+ return -1;
+ if((fid = H5Fcreate(UC_opts.filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0)
+ return -1;
+
+ /* Set up dimension sizes */
+ dims[0] = 0;
+ dims[1] = dims[2] = UC_opts.max_dims[1];
+
+ /* Create dataspace for creating datasets */
+ if((sid = H5Screate_simple(3, dims, UC_opts.max_dims)) < 0)
+ return -1;
+
+ /* Create dataset creation property list */
+ if((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ return -1;
+ if(H5Pset_chunk(dcpl, 3, UC_opts.chunkdims) < 0)
+ return -1;
+
+ /* create dataset of progname */
+ if((dsid = H5Dcreate2(fid, progname_g, UC_DATATYPE, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
+ return -1;
+
+ /* Check that the chunk index type is not version 1 B-tree.
+ * Version 1 B-trees are not supported under SWMR.
+ */
+ if(H5D__layout_idx_type_test(dsid, &idx_type) < 0)
+ return -1;
+ if(idx_type == H5D_CHUNK_IDX_BTREE) {
+ fprintf(stderr, "ERROR: Chunk index is version 1 B-tree: aborting.\n");
+ return -1;
+ }
+
+ /* Close everything */
+ if(H5Dclose(dsid) < 0)
+ return -1;
+ if(H5Pclose(fapl) < 0)
+ return -1;
+ if(H5Pclose(dcpl) < 0)
+ return -1;
+ if(H5Sclose(sid) < 0)
+ return -1;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ return 0;
+}
+
+/* Append planes, each of (1,2*chunksize,2*chunksize) to the dataset.
+ * In other words, 4 chunks are appended to the dataset at a time.
+ * Fill each plan with the plane number and then write it at the nth plane.
+ * Increase the plane number and repeat till the end of dataset, when it
+ * reaches chunksize long. End product is a (2*chunksize)^3 cube.
+ *
+ * Return: 0 succeed; -1 fail.
+ */
+int write_uc_file(hbool_t tosend)
+{
+ hid_t fid; /* File ID for new HDF5 file */
+ hid_t dsid; /* dataset ID */
+ hid_t fapl; /* File access property list */
+ hid_t dcpl; /* Dataset creation property list */
+ char *name;
+ UC_CTYPE *buffer, *bufptr; /* data buffer */
+ hsize_t cz=UC_opts.chunksize; /* Chunk size */
+ hid_t f_sid; /* dataset file space id */
+ hid_t m_sid; /* memory space id */
+ int rank; /* rank */
+ hsize_t chunk_dims[3]; /* Chunk dimensions */
+ hsize_t dims[3]; /* Dataspace dimensions */
+ hsize_t memdims[3]; /* Memory space dimensions */
+ hsize_t start[3] = {0,0,0}, count[3]; /* Hyperslab selection values */
+ hsize_t i, j, k;
+
+ name = UC_opts.filename;
+
+ /* Open the file */
+ if((fapl = h5_fileaccess()) < 0)
+ return -1;
+ if(UC_opts.use_swmr)
+ if(H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0)
+ return -1;
+ if((fid = H5Fopen(name, H5F_ACC_RDWR | (UC_opts.use_swmr ? H5F_ACC_SWMR_WRITE : 0), fapl)) < 0){
+ fprintf(stderr, "H5Fopen failed\n");
+ return -1;
+ }
+
+ if(tosend)
+ /* Send a message that H5Fopen is complete--releasing the file lock */
+ h5_send_message(WRITER_MESSAGE, NULL, NULL);
+
+ /* Open the dataset of the program name */
+ if((dsid = H5Dopen2(fid, progname_g, H5P_DEFAULT)) < 0){
+ fprintf(stderr, "H5Dopen2 failed\n");
+ return -1;
+ }
+
+ /* Find chunksize used */
+ if ((dcpl = H5Dget_create_plist(dsid)) < 0){
+ fprintf(stderr, "H5Dget_create_plist failed\n");
+ return -1;
+ }
+ if (H5D_CHUNKED != H5Pget_layout(dcpl)){
+ fprintf(stderr, "storage layout is not chunked\n");
+ return -1;
+ }
+ if ((rank = H5Pget_chunk(dcpl, 3, chunk_dims)) != 3){
+ fprintf(stderr, "storage rank is not 3\n");
+ return -1;
+ }
+
+ /* verify chunk_dims against set paramenters */
+ if (chunk_dims[0]!=UC_opts.chunkdims[0] || chunk_dims[1] != cz || chunk_dims[2] != cz){
+ fprintf(stderr, "chunk size is not as expected. Got dims=(%llu,%llu,%llu)\n",
+ (unsigned long long)chunk_dims[0], (unsigned long long)chunk_dims[1],
+ (unsigned long long)chunk_dims[2]);
+ return -1;
+ }
+
+ /* allocate space for data buffer 1 X dims[1] X dims[2] of UC_CTYPE */
+ memdims[0]=1;
+ memdims[1] = UC_opts.dims[1];
+ memdims[2] = UC_opts.dims[2];
+ if ((buffer=(UC_CTYPE*)HDmalloc((size_t)memdims[1]*(size_t)memdims[2]*sizeof(UC_CTYPE)))==NULL) {
+ fprintf(stderr, "malloc: failed\n");
+ return -1;
+ };
+
+ /*
+ * Get dataset rank and dimension.
+ */
+ f_sid = H5Dget_space(dsid); /* Get filespace handle first. */
+ rank = H5Sget_simple_extent_ndims(f_sid);
+ if (rank != UC_RANK){
+ fprintf(stderr, "rank(%d) of dataset does not match\n", rank);
+ return -1;
+ }
+ if (H5Sget_simple_extent_dims(f_sid, dims, NULL) < 0){
+ fprintf(stderr, "H5Sget_simple_extent_dims got error\n");
+ return -1;
+ }
+ printf("dataset rank %d, dimensions %llu x %llu x %llu\n",
+ rank, (unsigned long long)(dims[0]), (unsigned long long)(dims[1]),
+ (unsigned long long)(dims[2]));
+ /* verify that file space dims are as expected and are consistent with memory space dims */
+ if (dims[0] != 0 || dims[1] != memdims[1] || dims[2] != memdims[2]){
+ fprintf(stderr, "dataset is not empty. Got dims=(%llu,%llu,%llu)\n",
+ (unsigned long long)dims[0], (unsigned long long)dims[1],
+ (unsigned long long)dims[2]);
+ return -1;
+ }
+
+ /* setup mem-space for buffer */
+ if ((m_sid=H5Screate_simple(rank, memdims, NULL))<0){
+ fprintf(stderr, "H5Screate_simple for memory failed\n");
+ return -1;
+ };
+
+ /* write planes */
+ count[0]=1;
+ count[1]=dims[1];
+ count[2]=dims[2];
+ for (i=0; i<UC_opts.nplanes; i++){
+ /* fill buffer with value i+1 */
+ bufptr = buffer;
+ for (j=0; j<dims[1]; j++)
+ for (k=0; k<dims[2]; k++)
+ *bufptr++ = i;
+
+ /* Cork the dataset's metadata in the cache, if SWMR is enabled */
+ if(UC_opts.use_swmr)
+ if(H5Odisable_mdc_flushes(dsid) < 0) {
+ fprintf(stderr, "H5Odisable_mdc_flushes failed\n");
+ return -1;
+ }
+
+ /* extend the dataset by one for new plane */
+ dims[0]=i+1;
+ if(H5Dset_extent(dsid, dims) < 0){
+ fprintf(stderr, "H5Dset_extent failed\n");
+ return -1;
+ }
+
+ /* Get the dataset's dataspace */
+ if((f_sid = H5Dget_space(dsid)) < 0){
+ fprintf(stderr, "H5Dset_extent failed\n");
+ return -1;
+ }
+
+ start[0]=i;
+ /* Choose the next plane to write */
+ if(H5Sselect_hyperslab(f_sid, H5S_SELECT_SET, start, NULL, count, NULL) < 0){
+ fprintf(stderr, "Failed H5Sselect_hyperslab\n");
+ return -1;
+ }
+
+ /* Write plane to the dataset */
+ if(H5Dwrite(dsid, UC_DATATYPE, m_sid, f_sid, H5P_DEFAULT, buffer) < 0){
+ fprintf(stderr, "Failed H5Dwrite\n");
+ return -1;
+ }
+
+ /* Uncork the dataset's metadata from the cache, if SWMR is enabled */
+ if(UC_opts.use_swmr)
+ if(H5Oenable_mdc_flushes(dsid) < 0) {
+ fprintf(stderr, "H5Oenable_mdc_flushes failed\n");
+ return -1;
+ }
+
+ /* flush file to make the just written plane available. */
+ if(H5Dflush(dsid) < 0)
+ {
+ fprintf(stderr, "Failed to H5Fflush file\n");
+ return -1;
+ }
+ }
+
+ /* Done writing. Free/Close all resources including data file */
+ HDfree(buffer);
+ if (H5Dclose(dsid) < 0){
+ fprintf(stderr, "Failed to close datasete\n");
+ return -1;
+ }
+ if (H5Sclose(m_sid) < 0){
+ fprintf(stderr, "Failed to close memory space\n");
+ return -1;
+ }
+ if (H5Sclose(f_sid) < 0){
+ fprintf(stderr, "Failed to close file space\n");
+ return -1;
+ }
+ if (H5Pclose(fapl) < 0){
+ fprintf(stderr, "Failed to property list\n");
+ return -1;
+ }
+ if (H5Fclose(fid) < 0){
+ fprintf(stderr, "Failed to close file id\n");
+ return -1;
+ }
+
+ return 0;
+}
+
+
+/* Read planes from the dataset.
+ * It expects the dataset is being changed (growing).
+ * It checks the unlimited dimension (1st one). When it increases,
+ * it will read in the new planes, one by one, and verify the data correctness.
+ * (The nth plan should contain all "n".)
+ * When the unlimited dimension grows to the chunksize (it becomes a cube),
+ * that is the expected end of data, the reader exits.
+ *
+ * Return: 0 succeed; -1 fail.
+ */
+int read_uc_file(hbool_t towait)
+{
+ hid_t fapl; /* file access property list ID */
+ hid_t fid; /* File ID for new HDF5 file */
+ hid_t dsid; /* dataset ID */
+ char *name;
+ UC_CTYPE *buffer, *bufptr; /* read data buffer */
+ hid_t f_sid; /* dataset file space id */
+ hid_t m_sid; /* memory space id */
+ int rank; /* rank */
+ hsize_t dims[3]; /* Dataspace dimensions */
+ hsize_t memdims[3]; /* Memory space dimensions */
+ hsize_t nplane=0, nplane_old=0; /* nth plane, last nth plane */
+ hsize_t start[3] = {0,0,0}, count[3]; /* Hyperslab selection values */
+ hsize_t j, k;
+ int nreadererr=0;
+ int nerrs;
+ int nonewplane;
+
+ /* Before reading, wait for the message that H5Fopen is complete--file lock is released */
+ if(towait && h5_wait_message(WRITER_MESSAGE) < 0) {
+ fprintf(stderr, "Cannot find writer message file...failed\n");
+ return -1;
+ }
+
+ name = UC_opts.filename;
+
+ /* Open the file */
+ if((fapl = h5_fileaccess()) < 0)
+ return -1;
+ if((fid = H5Fopen(name, H5F_ACC_RDONLY | (UC_opts.use_swmr ? H5F_ACC_SWMR_READ : 0), fapl)) < 0){
+ fprintf(stderr, "H5Fopen failed\n");
+ return -1;
+ }
+ if (H5Pclose(fapl) < 0){
+ fprintf(stderr, "Failed to property list\n");
+ return -1;
+ }
+
+
+ /* Open the dataset of the program name */
+ if((dsid = H5Dopen2(fid, progname_g, H5P_DEFAULT)) < 0){
+ fprintf(stderr, "H5Dopen2 failed\n");
+ return -1;
+ }
+
+ /* allocate space for data buffer 1 X dims[1] X dims[2] of UC_CTYPE */
+ memdims[0]=1;
+ memdims[1] = UC_opts.dims[1];
+ memdims[2] = UC_opts.dims[2];
+ if ((buffer=(UC_CTYPE*)HDmalloc((size_t)memdims[1]*(size_t)memdims[2]*sizeof(UC_CTYPE)))==NULL) {
+ fprintf(stderr, "malloc: failed\n");
+ return -1;
+ };
+
+ /*
+ * Get dataset rank and dimension.
+ * Verify dimension is as expected (unlimited,2*chunksize,2*chunksize).
+ */
+ f_sid = H5Dget_space(dsid); /* Get filespace handle first. */
+ rank = H5Sget_simple_extent_ndims(f_sid);
+ if (rank != UC_RANK){
+ fprintf(stderr, "rank(%d) of dataset does not match\n", rank);
+ return -1;
+ }
+ if (H5Sget_simple_extent_dims(f_sid, dims, NULL) < 0){
+ fprintf(stderr, "H5Sget_simple_extent_dims got error\n");
+ return -1;
+ }
+ printf("dataset rank %d, dimensions %llu x %llu x %llu\n",
+ rank, (unsigned long long)(dims[0]), (unsigned long long)(dims[1]),
+ (unsigned long long)(dims[2]));
+ /* verify that file space dims are as expected and are consistent with memory space dims */
+ if (dims[1] != memdims[1] || dims[2] != memdims[2]){
+ fprintf(stderr, "dataset dimension is not as expected. Got dims=(%llu,%llu,%llu)\n",
+ (unsigned long long)dims[0], (unsigned long long)dims[1],
+ (unsigned long long)dims[2]);
+ fprintf(stderr, "But memdims=(%llu,%llu,%llu)\n",
+ (unsigned long long)memdims[0], (unsigned long long)memdims[1],
+ (unsigned long long)memdims[2]);
+ return -1;
+ }
+
+ /* setup mem-space for buffer */
+ if ((m_sid=H5Screate_simple(rank, memdims, NULL))<0){
+ fprintf(stderr, "H5Screate_simple for memory failed\n");
+ return -1;
+ };
+
+ /* Read 1 plane at a time whenever the dataset grows larger
+ * (along dim[0]) */
+ count[0]=1;
+ count[1]=dims[1];
+ count[2]=dims[2];
+ /* quit when all nplanes have been read */
+ nonewplane=0;
+ while (nplane_old < UC_opts.nplanes ){
+ /* print progress message according to if new planes are availalbe */
+ if (nplane_old < dims[0]) {
+ if (nonewplane){
+ /* end the previous message */
+ printf("\n");
+ nonewplane=0;
+ }
+ printf("reading planes %llu to %llu\n", (unsigned long long)nplane_old,
+ (unsigned long long)dims[0]);
+ }else{
+ if (nonewplane){
+ printf(".");
+ if (nonewplane>=30){
+ fprintf(stderr, "waited too long for new plane, quit.\n");
+ return -1;
+ }
+ }else{
+ /* print mesg only the first time; dots still no new plane */
+ printf("no new planes to read ");
+ }
+ nonewplane++;
+ /* pause for a second */
+ HDsleep(1);
+ }
+ for (nplane=nplane_old; nplane < dims[0]; nplane++){
+ /* read planes between last old nplanes and current extent */
+ /* Get the dataset's dataspace */
+ if((f_sid = H5Dget_space(dsid)) < 0){
+ fprintf(stderr, "H5Dget_space failed\n");
+ return -1;
+ }
+
+ start[0]=nplane;
+ /* Choose the next plane to read */
+ if(H5Sselect_hyperslab(f_sid, H5S_SELECT_SET, start, NULL, count, NULL) < 0){
+ fprintf(stderr, "H5Sselect_hyperslab failed\n");
+ return -1;
+ }
+
+ /* Read the plane from the dataset */
+ if(H5Dread(dsid, UC_DATATYPE, m_sid, f_sid, H5P_DEFAULT, buffer) < 0){
+ fprintf(stderr, "H5Dread failed\n");
+ return -1;
+ }
+
+ /* compare read data with expected data value which is nplane */
+ bufptr = buffer;
+ nerrs=0;
+ for (j=0; j<dims[1]; j++){
+ for (k=0; k<dims[2]; k++){
+ if ((hsize_t)*bufptr++ != nplane){
+ if (++nerrs < ErrorReportMax){
+ fprintf(stderr,
+ "found error %llu plane(%llu,%llu), expected %llu, got %d\n",
+ (unsigned long long)nplane, (unsigned long long)j,
+ (unsigned long long)k, (unsigned long long)nplane, (int)*(bufptr-1));
+ }
+ }
+ }
+ }
+ if (nerrs){
+ nreadererr++;
+ fprintf(stderr, "found %d unexpected values in plane %llu\n", nerrs,
+ (unsigned long long)nplane);
+ }
+ }
+ /* Have read all current planes */
+ nplane_old=dims[0];
+
+ /* check if dataset has grown since last time */
+#if 0
+ /* close dsid and file, then reopen them */
+ if (H5Dclose(dsid) < 0){
+ fprintf(stderr, "H5Dclose failed\n");
+ return -1;
+ }
+ if (H5Fclose(fid) < 0){
+ fprintf(stderr, "H5Fclose failed\n");
+ return -1;
+ }
+ if((fid = H5Fopen(name, H5F_ACC_RDONLY | (UC_opts.use_swmr ? H5F_ACC_SWMR_READ : 0), H5P_DEFAULT)) < 0){
+ fprintf(stderr, "H5Fopen failed\n");
+ return -1;
+ }
+ if((dsid = H5Dopen2(fid, progname_g, H5P_DEFAULT)) < 0){
+ fprintf(stderr, "H5Dopen2 failed\n");
+ return -1;
+ }
+#else
+ H5Drefresh(dsid);
+#endif
+ f_sid = H5Dget_space(dsid); /* Get filespace handle first. */
+ if (H5Sget_simple_extent_dims(f_sid, dims, NULL) < 0){
+ fprintf(stderr, "H5Sget_simple_extent_dims got error\n");
+ return -1;
+ }
+ }
+
+ if (nreadererr)
+ return -1;
+ else
+ return 0;
+}
+
+#endif /* H5_HAVE_FORK */
+