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authorvchoi <vchoi@jelly.ad.hdfgroup.org>2020-03-23 06:16:32 (GMT)
committervchoi <vchoi@jelly.ad.hdfgroup.org>2020-03-23 06:16:32 (GMT)
commitafdcac28b85d690eebc80ab568fa5266081baaaa (patch)
tree6d5a2bff45d9294646eb3367a882f3b73ef96082 /test
parent26fecb8c5a444c64106c36750addfc9d71338c1d (diff)
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A fix in the cleaning up code for datatype when datatype initialization via H5D__init_type() fails.
This is triggered by the tests for revised references when the libver bounds setting does not allow version 4 datatype message to be created. The test failure is abort core dumped. This is due to the datatype initialization fails before the datatype ID is registered. The datatype cleanup code should provide for the above situation. The code to fix the problem is the same as what is done in H5D__open_oid().
Diffstat (limited to 'test')
-rw-r--r--test/trefer.c736
1 files changed, 388 insertions, 348 deletions
diff --git a/test/trefer.c b/test/trefer.c
index 32caf5e..d399fef 100644
--- a/test/trefer.c
+++ b/test/trefer.c
@@ -631,173 +631,179 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
CHECK(sid1, H5I_INVALID_HID, "H5Screate_simple");
/* Create a dataset */
- dset1 = H5Dcreate2(fid1, "Dataset1", H5T_STD_REF, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(dset1, H5I_INVALID_HID, "H5Dcreate2");
+ H5E_BEGIN_TRY {
+ dset1 = H5Dcreate2(fid1, "Dataset1", H5T_STD_REF, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ } H5E_END_TRY;
+
+ if(dset1 < 0) {
+ VERIFY(libver_high <= H5F_LIBVER_V110, TRUE, "H5Dcreate2");
- /* Create references */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
- /* Select 6x6 hyperslab for first reference */
- start[0] = 2; start[1] = 2;
- stride[0] = 1; stride[1] = 1;
- count[0] = 1; count[1] = 1;
- block[0] = 6; block[1] = 6;
- ret = H5Sselect_hyperslab(sid2, H5S_SELECT_SET, start, stride, count, block);
- CHECK(ret, FAIL, "H5Sselect_hyperslab");
+ ret = H5Sclose(sid2);
+ CHECK(ret, FAIL, "H5Sclose");
- ret = (int)H5Sget_select_npoints(sid2);
- VERIFY(ret, 36, "H5Sget_select_npoints");
+ ret = H5Pclose(fapl);
+ CHECK(ret, FAIL, "H5Pclose");
- /* Store first dataset region */
- ret = H5Rcreate_region(fid1, "/Dataset2", sid2, H5P_DEFAULT, &wbuf[0]);
- CHECK(ret, FAIL, "H5Rcreate_region");
- ret = H5Rget_obj_type3(&wbuf[0], H5P_DEFAULT, &obj_type);
- CHECK(ret, FAIL, "H5Rget_obj_type3");
- VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+ } else {
- /* Select sequence of ten points for second reference */
- coord1[0][0] = 6; coord1[0][1] = 9;
- coord1[1][0] = 2; coord1[1][1] = 2;
- coord1[2][0] = 8; coord1[2][1] = 4;
- coord1[3][0] = 1; coord1[3][1] = 6;
- coord1[4][0] = 2; coord1[4][1] = 8;
- coord1[5][0] = 3; coord1[5][1] = 2;
- coord1[6][0] = 0; coord1[6][1] = 4;
- coord1[7][0] = 9; coord1[7][1] = 0;
- coord1[8][0] = 7; coord1[8][1] = 1;
- coord1[9][0] = 3; coord1[9][1] = 3;
- ret = H5Sselect_elements(sid2, H5S_SELECT_SET, (size_t)POINT1_NPOINTS, (const hsize_t *)coord1);
- CHECK(ret, FAIL, "H5Sselect_elements");
+ CHECK(dset1, H5I_INVALID_HID, "H5Dcreate2");
- ret = (int)H5Sget_select_npoints(sid2);
- VERIFY(ret, SPACE2_DIM2, "H5Sget_select_npoints");
+ /* Create references */
- /* Store second dataset region */
- ret = H5Rcreate_region(fid1, "/Dataset2", sid2, H5P_DEFAULT, &wbuf[1]);
- CHECK(ret, FAIL, "H5Rcreate_region");
+ /* Select 6x6 hyperslab for first reference */
+ start[0] = 2; start[1] = 2;
+ stride[0] = 1; stride[1] = 1;
+ count[0] = 1; count[1] = 1;
+ block[0] = 6; block[1] = 6;
+ ret = H5Sselect_hyperslab(sid2, H5S_SELECT_SET, start, stride, count, block);
+ CHECK(ret, FAIL, "H5Sselect_hyperslab");
- /* Select unlimited hyperslab for third reference */
- start[0] = 1;
- start[1] = 8;
- stride[0] = 4;
- stride[1] = 1;
- count[0] = H5S_UNLIMITED;
- count[1] = 1;
- block[0] = 2;
- block[1] = 2;
- ret = H5Sselect_hyperslab(sid2, H5S_SELECT_SET, start, stride, count, block);
- CHECK(ret, FAIL, "H5Sselect_hyperslab");
+ ret = (int)H5Sget_select_npoints(sid2);
+ VERIFY(ret, 36, "H5Sget_select_npoints");
- hssize_ret = H5Sget_select_npoints(sid2);
- VERIFY(hssize_ret, (hssize_t)H5S_UNLIMITED, "H5Sget_select_npoints");
+ /* Store first dataset region */
+ ret = H5Rcreate_region(fid1, "/Dataset2", sid2, H5P_DEFAULT, &wbuf[0]);
+ CHECK(ret, FAIL, "H5Rcreate_region");
+ ret = H5Rget_obj_type3(&wbuf[0], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
- /* Store third dataset region */
- ret = H5Rcreate_region(fid1, "/Dataset2", sid2, H5P_DEFAULT, &wbuf[2]);
- CHECK(ret, FAIL, "H5Rcreate_region");
+ /* Select sequence of ten points for second reference */
+ coord1[0][0] = 6; coord1[0][1] = 9;
+ coord1[1][0] = 2; coord1[1][1] = 2;
+ coord1[2][0] = 8; coord1[2][1] = 4;
+ coord1[3][0] = 1; coord1[3][1] = 6;
+ coord1[4][0] = 2; coord1[4][1] = 8;
+ coord1[5][0] = 3; coord1[5][1] = 2;
+ coord1[6][0] = 0; coord1[6][1] = 4;
+ coord1[7][0] = 9; coord1[7][1] = 0;
+ coord1[8][0] = 7; coord1[8][1] = 1;
+ coord1[9][0] = 3; coord1[9][1] = 3;
+ ret = H5Sselect_elements(sid2, H5S_SELECT_SET, (size_t)POINT1_NPOINTS, (const hsize_t *)coord1);
+ CHECK(ret, FAIL, "H5Sselect_elements");
- ret = H5Rget_obj_type3(&wbuf[2], H5P_DEFAULT, &obj_type);
- CHECK(ret, FAIL, "H5Rget_obj_type3");
- VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
+ ret = (int)H5Sget_select_npoints(sid2);
+ VERIFY(ret, SPACE2_DIM2, "H5Sget_select_npoints");
- /* Store fourth dataset region */
- ret = H5Rcreate_region(fid1, "/Dataset2", sid2, H5P_DEFAULT, &wbuf[3]);
- CHECK(ret, FAIL, "H5Rcreate_region");
+ /* Store second dataset region */
+ ret = H5Rcreate_region(fid1, "/Dataset2", sid2, H5P_DEFAULT, &wbuf[1]);
+ CHECK(ret, FAIL, "H5Rcreate_region");
- /* Write selection to disk */
- H5E_BEGIN_TRY {
- ret = H5Dwrite(dset1, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
- } H5E_END_TRY;
+ /* Select unlimited hyperslab for third reference */
+ start[0] = 1;
+ start[1] = 8;
+ stride[0] = 4;
+ stride[1] = 1;
+ count[0] = H5S_UNLIMITED;
+ count[1] = 1;
+ block[0] = 2;
+ block[1] = 2;
+ ret = H5Sselect_hyperslab(sid2, H5S_SELECT_SET, start, stride, count, block);
+ CHECK(ret, FAIL, "H5Sselect_hyperslab");
- if(libver_high < H5F_LIBVER_V110)
- VERIFY(ret, FAIL, "H5Dwrite");
- else
- CHECK(ret, FAIL, "H5Dwrite");
+ hssize_ret = H5Sget_select_npoints(sid2);
+ VERIFY(hssize_ret, (hssize_t)H5S_UNLIMITED, "H5Sget_select_npoints");
- /*
- * Store a dataset region reference which will not get written to disk
- */
+ /* Store third dataset region */
+ ret = H5Rcreate_region(fid1, "/Dataset2", sid2, H5P_DEFAULT, &wbuf[2]);
+ CHECK(ret, FAIL, "H5Rcreate_region");
- /* Create the dataspace of the region references */
- space_NA = H5Screate_simple(1, dims_NA, NULL);
- CHECK(space_NA, H5I_INVALID_HID, "H5Screate_simple");
+ ret = H5Rget_obj_type3(&wbuf[2], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
- /* Create the dataset and write the region references to it */
- dset_NA = H5Dcreate2(fid1, "DS_NA", H5T_STD_REF, space_NA, H5P_DEFAULT,
- H5P_DEFAULT, H5P_DEFAULT);
- CHECK(dset_NA, H5I_INVALID_HID, "H5Dcreate");
+ /* Store fourth dataset region */
+ ret = H5Rcreate_region(fid1, "/Dataset2", sid2, H5P_DEFAULT, &wbuf[3]);
+ CHECK(ret, FAIL, "H5Rcreate_region");
- /* Close and release resources for undefined region reference tests */
- ret = H5Dclose(dset_NA);
- CHECK(ret, FAIL, "H5Dclose");
- ret = H5Sclose(space_NA);
- CHECK(ret, FAIL, "H5Sclose");
+ /* Write selection to disk */
+ ret = H5Dwrite(dset1, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
- /* Close disk dataspace */
- ret = H5Sclose(sid1);
- CHECK(ret, FAIL, "H5Sclose");
+ /*
+ * Store a dataset region reference which will not get written to disk
+ */
- /* Close Dataset */
- ret = H5Dclose(dset1);
- CHECK(ret, FAIL, "H5Dclose");
+ /* Create the dataspace of the region references */
+ space_NA = H5Screate_simple(1, dims_NA, NULL);
+ CHECK(space_NA, H5I_INVALID_HID, "H5Screate_simple");
- /* Close uint8 dataset dataspace */
- ret = H5Sclose(sid2);
- CHECK(ret, FAIL, "H5Sclose");
+ /* Create the dataset and write the region references to it */
+ dset_NA = H5Dcreate2(fid1, "DS_NA", H5T_STD_REF, space_NA, H5P_DEFAULT,
+ H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dset_NA, H5I_INVALID_HID, "H5Dcreate");
- /* Close file */
- ret = H5Fclose(fid1);
- CHECK(ret, FAIL, "H5Fclose");
+ /* Close and release resources for undefined region reference tests */
+ ret = H5Dclose(dset_NA);
+ CHECK(ret, FAIL, "H5Dclose");
+ ret = H5Sclose(space_NA);
+ CHECK(ret, FAIL, "H5Sclose");
- /* Re-open the file */
- fid1 = H5Fopen(FILE_REF_REG, H5F_ACC_RDWR, fapl);
- CHECK(fid1, H5I_INVALID_HID, "H5Fopen");
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dset1);
+ CHECK(ret, FAIL, "H5Dclose");
- /*
- * Start the test of an undefined reference
- */
+ /* Close uint8 dataset dataspace */
+ ret = H5Sclose(sid2);
+ CHECK(ret, FAIL, "H5Sclose");
- /* Open the dataset of the undefined references */
- dset_NA = H5Dopen2(fid1, "DS_NA", H5P_DEFAULT);
- CHECK(dset_NA, H5I_INVALID_HID, "H5Dopen2");
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
- /* Read the data */
- ret = H5Dread(dset_NA, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rdata_NA);
- CHECK(ret, FAIL, "H5Dread");
+ /* Re-open the file */
+ fid1 = H5Fopen(FILE_REF_REG, H5F_ACC_RDWR, fapl);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fopen");
- /*
- * Dereference an undefined reference (should fail)
- */
- H5E_BEGIN_TRY {
- dset2 = H5Ropen_object(&rdata_NA[0], H5P_DEFAULT, H5P_DEFAULT);
- } H5E_END_TRY;
- VERIFY(dset2, H5I_INVALID_HID, "H5Ropen_object");
+ /*
+ * Start the test of an undefined reference
+ */
- /* Close and release resources. */
- ret = H5Dclose(dset_NA);
- CHECK(ret, FAIL, "H5Dclose");
+ /* Open the dataset of the undefined references */
+ dset_NA = H5Dopen2(fid1, "DS_NA", H5P_DEFAULT);
+ CHECK(dset_NA, H5I_INVALID_HID, "H5Dopen2");
- /* This close should fail since H5Ropen_object never created
- * the id of the referenced object. */
- H5E_BEGIN_TRY {
- ret = H5Dclose(dset2);
- } H5E_END_TRY;
- VERIFY(ret, FAIL, "H5Dclose");
+ /* Read the data */
+ ret = H5Dread(dset_NA, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rdata_NA);
+ CHECK(ret, FAIL, "H5Dread");
- /*
- * End the test of an undefined reference
- */
+ /*
+ * Dereference an undefined reference (should fail)
+ */
+ H5E_BEGIN_TRY {
+ dset2 = H5Ropen_object(&rdata_NA[0], H5P_DEFAULT, H5P_DEFAULT);
+ } H5E_END_TRY;
+ VERIFY(dset2, H5I_INVALID_HID, "H5Ropen_object");
- /* Open the dataset */
- dset1 = H5Dopen2(fid1, "/Dataset1", H5P_DEFAULT);
- CHECK(dset1, H5I_INVALID_HID, "H5Dopen2");
+ /* Close and release resources. */
+ ret = H5Dclose(dset_NA);
+ CHECK(ret, FAIL, "H5Dclose");
- /* Read selection from disk */
- H5E_BEGIN_TRY {
- ret = H5Dread(dset1, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
- } H5E_END_TRY;
+ /* This close should fail since H5Ropen_object never created
+ * the id of the referenced object. */
+ H5E_BEGIN_TRY {
+ ret = H5Dclose(dset2);
+ } H5E_END_TRY;
+ VERIFY(ret, FAIL, "H5Dclose");
- if(libver_high < H5F_LIBVER_V110)
- CHECK(ret, FAIL, "H5Dread");
- else {
+ /*
+ * End the test of an undefined reference
+ */
+
+ /* Open the dataset */
+ dset1 = H5Dopen2(fid1, "/Dataset1", H5P_DEFAULT);
+ CHECK(dset1, H5I_INVALID_HID, "H5Dopen2");
+
+ /* Read selection from disk */
+ ret = H5Dread(dset1, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
CHECK(ret, FAIL, "H5Dread");
/* Try to open objects */
@@ -832,7 +838,10 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
VERIFY(ret, 36, "H5Sget_select_npoints");
ret = (int)H5Sget_select_hyper_nblocks(sid2);
VERIFY(ret, 1, "H5Sget_select_hyper_nblocks");
- coords = (hsize_t *)HDmalloc((size_t)ret * SPACE2_RANK * sizeof(hsize_t) * 2); /* allocate space for the hyperslab blocks */
+
+ /* allocate space for the hyperslab blocks */
+ coords = (hsize_t *)HDmalloc((size_t)ret * SPACE2_RANK * sizeof(hsize_t) * 2);
+
ret = H5Sget_select_hyper_blocklist(sid2, (hsize_t)0, (hsize_t)ret, coords);
CHECK(ret, FAIL, "H5Sget_select_hyper_blocklist");
VERIFY(coords[0], 2, "Hyperslab Coordinates");
@@ -860,7 +869,10 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
VERIFY(ret, SPACE2_DIM2, "H5Sget_select_npoints");
ret = (int)H5Sget_select_elem_npoints(sid2);
VERIFY(ret, SPACE2_DIM2, "H5Sget_select_elem_npoints");
- coords = (hsize_t *)HDmalloc((size_t)ret * SPACE2_RANK * sizeof(hsize_t)); /* allocate space for the element points */
+
+ /* allocate space for the element points */
+ coords = (hsize_t *)HDmalloc((size_t)ret * SPACE2_RANK * sizeof(hsize_t));
+
ret = H5Sget_select_elem_pointlist(sid2, (hsize_t)0, (hsize_t)ret, coords);
CHECK(ret, FAIL, "H5Sget_select_elem_pointlist");
VERIFY(coords[0], coord1[0][0], "Element Coordinates");
@@ -935,35 +947,34 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
} H5E_END_TRY;
VERIFY(ret, FAIL, "H5Rget_obj_type3");
} /* end for */
- }
- /* Close Dataset */
- ret = H5Dclose(dset1);
- CHECK(ret, FAIL, "H5Dclose");
+ /* Close Dataset */
+ ret = H5Dclose(dset1);
+ CHECK(ret, FAIL, "H5Dclose");
- /* Close dataset access property list */
- ret = H5Pclose(dapl_id);
- CHECK(ret, FAIL, "H5Pclose");
+ /* Close dataset access property list */
+ ret = H5Pclose(dapl_id);
+ CHECK(ret, FAIL, "H5Pclose");
- /* Close file */
- ret = H5Fclose(fid1);
- CHECK(ret, FAIL, "H5Fclose");
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
- /* Destroy references */
- for(j = 0; j < SPACE1_DIM1; j++) {
- ret = H5Rdestroy(&wbuf[j]);
- CHECK(ret, FAIL, "H5Rdestroy");
- if(libver_high >= H5F_LIBVER_V110) {
+ /* Destroy references */
+ for(j = 0; j < SPACE1_DIM1; j++) {
+ ret = H5Rdestroy(&wbuf[j]);
+ CHECK(ret, FAIL, "H5Rdestroy");
ret = H5Rdestroy(&rbuf[j]);
CHECK(ret, FAIL, "H5Rdestroy");
}
- }
- /* Free memory buffers */
- HDfree(wbuf);
- HDfree(rbuf);
- HDfree(dwbuf);
- HDfree(drbuf);
+ /* Free memory buffers */
+ HDfree(wbuf);
+ HDfree(rbuf);
+ HDfree(dwbuf);
+ HDfree(drbuf);
+
+ }
} /* test_reference_region() */
/****************************************************************
@@ -1054,226 +1065,255 @@ test_reference_region_1D(H5F_libver_t libver_low, H5F_libver_t libver_high)
CHECK(sid1, H5I_INVALID_HID, "H5Screate_simple");
/* Create a dataset */
- dset1 = H5Dcreate2(fid1, "Dataset1", H5T_STD_REF, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(ret, FAIL, "H5Dcreate2");
+ H5E_BEGIN_TRY {
+ dset1 = H5Dcreate2(fid1, "Dataset1", H5T_STD_REF, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ } H5E_END_TRY;
- /* Create references */
+ if(dset1 < 0) {
- /* Select 15 2x1 hyperslabs for first reference */
- start[0] = 2;
- stride[0] = 5;
- count[0] = 15;
- block[0] = 2;
- ret = H5Sselect_hyperslab(sid3, H5S_SELECT_SET, start, stride, count, block);
- CHECK(ret, FAIL, "H5Sselect_hyperslab");
+ VERIFY(libver_high <= H5F_LIBVER_V110, TRUE, "H5Dcreate2");
- ret = (int)H5Sget_select_npoints(sid3);
- VERIFY(ret, (block[0] * count[0]), "H5Sget_select_npoints");
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
- /* Store first dataset region */
- ret = H5Rcreate_region(fid1, "/Dataset2", sid3, H5P_DEFAULT, &wbuf[0]);
- CHECK(ret, FAIL, "H5Rcreate_region");
- ret = H5Rget_obj_type3(&wbuf[0], H5P_DEFAULT, &obj_type);
- CHECK(ret, FAIL, "H5Rget_obj_type3");
- VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
+ ret = H5Sclose(sid3);
+ CHECK(ret, FAIL, "H5Sclose");
- /* Select sequence of ten points for second reference */
- coord1[0][0] = 16;
- coord1[1][0] = 22;
- coord1[2][0] = 38;
- coord1[3][0] = 41;
- coord1[4][0] = 52;
- coord1[5][0] = 63;
- coord1[6][0] = 70;
- coord1[7][0] = 89;
- coord1[8][0] = 97;
- coord1[9][0] = 03;
- ret = H5Sselect_elements(sid3, H5S_SELECT_SET, (size_t)POINT1_NPOINTS, (const hsize_t *)coord1);
- CHECK(ret, FAIL, "H5Sselect_elements");
+ ret = H5Pclose(fapl);
+ CHECK(ret, FAIL, "H5Pclose");
- ret = (int)H5Sget_select_npoints(sid3);
- VERIFY(ret, POINT1_NPOINTS, "H5Sget_select_npoints");
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
- /* Store second dataset region */
- ret = H5Rcreate_region(fid1, "/Dataset2", sid3, H5P_DEFAULT, &wbuf[1]);
- CHECK(ret, FAIL, "H5Rcreate_region");
+ } else {
- /* Write selection to disk */
- ret = H5Dwrite(dset1, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
- CHECK(ret, FAIL, "H5Dwrite");
+ CHECK(ret, FAIL, "H5Dcreate2");
- /* Close disk dataspace */
- ret = H5Sclose(sid1);
- CHECK(ret, FAIL, "H5Sclose");
+ /* Create references */
- /* Close Dataset */
- ret = H5Dclose(dset1);
- CHECK(ret, FAIL, "H5Dclose");
+ /* Select 15 2x1 hyperslabs for first reference */
+ start[0] = 2;
+ stride[0] = 5;
+ count[0] = 15;
+ block[0] = 2;
+ ret = H5Sselect_hyperslab(sid3, H5S_SELECT_SET, start, stride, count, block);
+ CHECK(ret, FAIL, "H5Sselect_hyperslab");
- /* Close uint8 dataset dataspace */
- ret = H5Sclose(sid3);
- CHECK(ret, FAIL, "H5Sclose");
+ ret = (int)H5Sget_select_npoints(sid3);
+ VERIFY(ret, (block[0] * count[0]), "H5Sget_select_npoints");
- /* Close file */
- ret = H5Fclose(fid1);
- CHECK(ret, FAIL, "H5Fclose");
+ /* Store first dataset region */
+ ret = H5Rcreate_region(fid1, "/Dataset2", sid3, H5P_DEFAULT, &wbuf[0]);
+ CHECK(ret, FAIL, "H5Rcreate_region");
+ ret = H5Rget_obj_type3(&wbuf[0], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
- /* Re-open the file */
- fid1 = H5Fopen(FILE_REF_REG_1D, H5F_ACC_RDWR, fapl);
- CHECK(fid1, H5I_INVALID_HID, "H5Fopen");
+ /* Select sequence of ten points for second reference */
+ coord1[0][0] = 16;
+ coord1[1][0] = 22;
+ coord1[2][0] = 38;
+ coord1[3][0] = 41;
+ coord1[4][0] = 52;
+ coord1[5][0] = 63;
+ coord1[6][0] = 70;
+ coord1[7][0] = 89;
+ coord1[8][0] = 97;
+ coord1[9][0] = 03;
+ ret = H5Sselect_elements(sid3, H5S_SELECT_SET, (size_t)POINT1_NPOINTS, (const hsize_t *)coord1);
+ CHECK(ret, FAIL, "H5Sselect_elements");
+
+ ret = (int)H5Sget_select_npoints(sid3);
+ VERIFY(ret, POINT1_NPOINTS, "H5Sget_select_npoints");
+
+ /* Store second dataset region */
+ ret = H5Rcreate_region(fid1, "/Dataset2", sid3, H5P_DEFAULT, &wbuf[1]);
+ CHECK(ret, FAIL, "H5Rcreate_region");
- /* Open the dataset */
- dset1 = H5Dopen2(fid1, "/Dataset1", H5P_DEFAULT);
- CHECK(dset1, H5I_INVALID_HID, "H5Dopen2");
+ /* Write selection to disk */
+ ret = H5Dwrite(dset1, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
+ CHECK(ret, FAIL, "H5Dwrite");
- /* Read selection from disk */
- ret = H5Dread(dset1, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
- CHECK(ret, FAIL, "H5Dread");
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
- /* Try to open objects */
- dset3 = H5Ropen_object(&rbuf[0], H5P_DEFAULT, dapl_id);
- CHECK(dset3, H5I_INVALID_HID, "H5Ropen_object");
+ /* Close Dataset */
+ ret = H5Dclose(dset1);
+ CHECK(ret, FAIL, "H5Dclose");
- /* Check what H5Rget_obj_type3 function returns */
- ret = H5Rget_obj_type3(&rbuf[0], H5P_DEFAULT, &obj_type);
- CHECK(ret, FAIL, "H5Rget_obj_type3");
- VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
+ /* Close uint8 dataset dataspace */
+ ret = H5Sclose(sid3);
+ CHECK(ret, FAIL, "H5Sclose");
- /* Check information in referenced dataset */
- sid1 = H5Dget_space(dset3);
- CHECK(sid1, H5I_INVALID_HID, "H5Dget_space");
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
- ret = (int)H5Sget_simple_extent_npoints(sid1);
- VERIFY(ret, SPACE3_DIM1, "H5Sget_simple_extent_npoints");
+ /* Re-open the file */
+ fid1 = H5Fopen(FILE_REF_REG_1D, H5F_ACC_RDWR, fapl);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fopen");
- /* Read from disk */
- ret = H5Dread(dset3, H5T_STD_U8LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, drbuf);
- CHECK(ret, FAIL, "H5Dread");
+ /* Open the dataset */
+ dset1 = H5Dopen2(fid1, "/Dataset1", H5P_DEFAULT);
+ CHECK(dset1, H5I_INVALID_HID, "H5Dopen2");
- for(tu8 = (uint8_t *)drbuf, i = 0; i < SPACE3_DIM1; i++, tu8++)
- VERIFY(*tu8, (uint8_t)(i * 3), "Data");
-
- /* Get the hyperslab selection */
- sid3 = H5Ropen_region(&rbuf[0], H5P_DEFAULT, H5P_DEFAULT);
- CHECK(sid3, H5I_INVALID_HID, "H5Ropen_region");
-
- /* Verify correct hyperslab selected */
- ret = (int)H5Sget_select_npoints(sid3);
- VERIFY(ret, 30, "H5Sget_select_npoints");
- ret = (int)H5Sget_select_hyper_nblocks(sid3);
- VERIFY(ret, 15, "H5Sget_select_hyper_nblocks");
- coords = (hsize_t *)HDmalloc((size_t)ret * SPACE3_RANK * sizeof(hsize_t) * 2); /* allocate space for the hyperslab blocks */
- ret = H5Sget_select_hyper_blocklist(sid3, (hsize_t)0, (hsize_t)ret, coords);
- CHECK(ret, FAIL, "H5Sget_select_hyper_blocklist");
- VERIFY(coords[0], 2, "Hyperslab Coordinates");
- VERIFY(coords[1], 3, "Hyperslab Coordinates");
- VERIFY(coords[2], 7, "Hyperslab Coordinates");
- VERIFY(coords[3], 8, "Hyperslab Coordinates");
- VERIFY(coords[4], 12, "Hyperslab Coordinates");
- VERIFY(coords[5], 13, "Hyperslab Coordinates");
- VERIFY(coords[6], 17, "Hyperslab Coordinates");
- VERIFY(coords[7], 18, "Hyperslab Coordinates");
- VERIFY(coords[8], 22, "Hyperslab Coordinates");
- VERIFY(coords[9], 23, "Hyperslab Coordinates");
- VERIFY(coords[10], 27, "Hyperslab Coordinates");
- VERIFY(coords[11], 28, "Hyperslab Coordinates");
- VERIFY(coords[12], 32, "Hyperslab Coordinates");
- VERIFY(coords[13], 33, "Hyperslab Coordinates");
- VERIFY(coords[14], 37, "Hyperslab Coordinates");
- VERIFY(coords[15], 38, "Hyperslab Coordinates");
- VERIFY(coords[16], 42, "Hyperslab Coordinates");
- VERIFY(coords[17], 43, "Hyperslab Coordinates");
- VERIFY(coords[18], 47, "Hyperslab Coordinates");
- VERIFY(coords[19], 48, "Hyperslab Coordinates");
- VERIFY(coords[20], 52, "Hyperslab Coordinates");
- VERIFY(coords[21], 53, "Hyperslab Coordinates");
- VERIFY(coords[22], 57, "Hyperslab Coordinates");
- VERIFY(coords[23], 58, "Hyperslab Coordinates");
- VERIFY(coords[24], 62, "Hyperslab Coordinates");
- VERIFY(coords[25], 63, "Hyperslab Coordinates");
- VERIFY(coords[26], 67, "Hyperslab Coordinates");
- VERIFY(coords[27], 68, "Hyperslab Coordinates");
- VERIFY(coords[28], 72, "Hyperslab Coordinates");
- VERIFY(coords[29], 73, "Hyperslab Coordinates");
- HDfree(coords);
- ret = H5Sget_select_bounds(sid3, low, high);
- CHECK(ret, FAIL, "H5Sget_select_bounds");
- VERIFY(low[0], 2, "Selection Bounds");
- VERIFY(high[0], 73, "Selection Bounds");
-
- /* Close region space */
- ret = H5Sclose(sid3);
- CHECK(ret, FAIL, "H5Sclose");
+ /* Read selection from disk */
+ ret = H5Dread(dset1, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
+ CHECK(ret, FAIL, "H5Dread");
- /* Get the element selection */
- sid3 = H5Ropen_region(&rbuf[1], H5P_DEFAULT, H5P_DEFAULT);
- CHECK(sid3, H5I_INVALID_HID, "H5Ropen_region");
-
- /* Verify correct elements selected */
- ret = (int)H5Sget_select_npoints(sid3);
- VERIFY(ret, 10, "H5Sget_select_npoints");
- ret = (int)H5Sget_select_elem_npoints(sid3);
- VERIFY(ret, 10, "H5Sget_select_elem_npoints");
- coords = (hsize_t *)HDmalloc((size_t)ret * SPACE3_RANK * sizeof(hsize_t)); /* allocate space for the element points */
- ret = H5Sget_select_elem_pointlist(sid3, (hsize_t)0, (hsize_t)ret, coords);
- CHECK(ret, FAIL, "H5Sget_select_elem_pointlist");
- VERIFY(coords[0], coord1[0][0], "Element Coordinates");
- VERIFY(coords[1], coord1[1][0], "Element Coordinates");
- VERIFY(coords[2], coord1[2][0], "Element Coordinates");
- VERIFY(coords[3], coord1[3][0], "Element Coordinates");
- VERIFY(coords[4], coord1[4][0], "Element Coordinates");
- VERIFY(coords[5], coord1[5][0], "Element Coordinates");
- VERIFY(coords[6], coord1[6][0], "Element Coordinates");
- VERIFY(coords[7], coord1[7][0], "Element Coordinates");
- VERIFY(coords[8], coord1[8][0], "Element Coordinates");
- VERIFY(coords[9], coord1[9][0], "Element Coordinates");
- HDfree(coords);
- ret = H5Sget_select_bounds(sid3, low, high);
- CHECK(ret, FAIL, "H5Sget_select_bounds");
- VERIFY(low[0], 3, "Selection Bounds");
- VERIFY(high[0], 97, "Selection Bounds");
-
- /* Close region space */
- ret = H5Sclose(sid3);
- CHECK(ret, FAIL, "H5Sclose");
+ /* Try to open objects */
+ dset3 = H5Ropen_object(&rbuf[0], H5P_DEFAULT, dapl_id);
+ CHECK(dset3, H5I_INVALID_HID, "H5Ropen_object");
- /* Close first space */
- ret = H5Sclose(sid1);
- CHECK(ret, FAIL, "H5Sclose");
+ /* Check what H5Rget_obj_type3 function returns */
+ ret = H5Rget_obj_type3(&rbuf[0], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
- /* Close dereferenced Dataset */
- ret = H5Dclose(dset3);
- CHECK(ret, FAIL, "H5Dclose");
+ /* Check information in referenced dataset */
+ sid1 = H5Dget_space(dset3);
+ CHECK(sid1, H5I_INVALID_HID, "H5Dget_space");
- /* Close Dataset */
- ret = H5Dclose(dset1);
- CHECK(ret, FAIL, "H5Dclose");
+ ret = (int)H5Sget_simple_extent_npoints(sid1);
+ VERIFY(ret, SPACE3_DIM1, "H5Sget_simple_extent_npoints");
- /* Close dataset access property list */
- ret = H5Pclose(dapl_id);
- CHECK(ret, FAIL, "H5Pclose");
+ /* Read from disk */
+ ret = H5Dread(dset3, H5T_STD_U8LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, drbuf);
+ CHECK(ret, FAIL, "H5Dread");
- /* Close file access property list */
- ret = H5Pclose(fapl);
- CHECK(ret, FAIL, "H5Pclose");
+ for(tu8 = (uint8_t *)drbuf, i = 0; i < SPACE3_DIM1; i++, tu8++)
+ VERIFY(*tu8, (uint8_t)(i * 3), "Data");
- /* Close file */
- ret = H5Fclose(fid1);
- CHECK(ret, FAIL, "H5Fclose");
+ /* Get the hyperslab selection */
+ sid3 = H5Ropen_region(&rbuf[0], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(sid3, H5I_INVALID_HID, "H5Ropen_region");
- /* Destroy references */
- for(i = 0; i < 2; i++) {
- ret = H5Rdestroy(&wbuf[i]);
- CHECK(ret, FAIL, "H5Rdestroy");
- ret = H5Rdestroy(&rbuf[i]);
- CHECK(ret, FAIL, "H5Rdestroy");
- }
+ /* Verify correct hyperslab selected */
+ ret = (int)H5Sget_select_npoints(sid3);
+ VERIFY(ret, 30, "H5Sget_select_npoints");
+ ret = (int)H5Sget_select_hyper_nblocks(sid3);
+ VERIFY(ret, 15, "H5Sget_select_hyper_nblocks");
- /* Free memory buffers */
- HDfree(wbuf);
- HDfree(rbuf);
- HDfree(dwbuf);
- HDfree(drbuf);
+ /* allocate space for the hyperslab blocks */
+ coords = (hsize_t *)HDmalloc((size_t)ret * SPACE3_RANK * sizeof(hsize_t) * 2);
+
+ ret = H5Sget_select_hyper_blocklist(sid3, (hsize_t)0, (hsize_t)ret, coords);
+ CHECK(ret, FAIL, "H5Sget_select_hyper_blocklist");
+ VERIFY(coords[0], 2, "Hyperslab Coordinates");
+ VERIFY(coords[1], 3, "Hyperslab Coordinates");
+ VERIFY(coords[2], 7, "Hyperslab Coordinates");
+ VERIFY(coords[3], 8, "Hyperslab Coordinates");
+ VERIFY(coords[4], 12, "Hyperslab Coordinates");
+ VERIFY(coords[5], 13, "Hyperslab Coordinates");
+ VERIFY(coords[6], 17, "Hyperslab Coordinates");
+ VERIFY(coords[7], 18, "Hyperslab Coordinates");
+ VERIFY(coords[8], 22, "Hyperslab Coordinates");
+ VERIFY(coords[9], 23, "Hyperslab Coordinates");
+ VERIFY(coords[10], 27, "Hyperslab Coordinates");
+ VERIFY(coords[11], 28, "Hyperslab Coordinates");
+ VERIFY(coords[12], 32, "Hyperslab Coordinates");
+ VERIFY(coords[13], 33, "Hyperslab Coordinates");
+ VERIFY(coords[14], 37, "Hyperslab Coordinates");
+ VERIFY(coords[15], 38, "Hyperslab Coordinates");
+ VERIFY(coords[16], 42, "Hyperslab Coordinates");
+ VERIFY(coords[17], 43, "Hyperslab Coordinates");
+ VERIFY(coords[18], 47, "Hyperslab Coordinates");
+ VERIFY(coords[19], 48, "Hyperslab Coordinates");
+ VERIFY(coords[20], 52, "Hyperslab Coordinates");
+ VERIFY(coords[21], 53, "Hyperslab Coordinates");
+ VERIFY(coords[22], 57, "Hyperslab Coordinates");
+ VERIFY(coords[23], 58, "Hyperslab Coordinates");
+ VERIFY(coords[24], 62, "Hyperslab Coordinates");
+ VERIFY(coords[25], 63, "Hyperslab Coordinates");
+ VERIFY(coords[26], 67, "Hyperslab Coordinates");
+ VERIFY(coords[27], 68, "Hyperslab Coordinates");
+ VERIFY(coords[28], 72, "Hyperslab Coordinates");
+ VERIFY(coords[29], 73, "Hyperslab Coordinates");
+ HDfree(coords);
+ ret = H5Sget_select_bounds(sid3, low, high);
+ CHECK(ret, FAIL, "H5Sget_select_bounds");
+ VERIFY(low[0], 2, "Selection Bounds");
+ VERIFY(high[0], 73, "Selection Bounds");
+
+ /* Close region space */
+ ret = H5Sclose(sid3);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Get the element selection */
+ sid3 = H5Ropen_region(&rbuf[1], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(sid3, H5I_INVALID_HID, "H5Ropen_region");
+
+ /* Verify correct elements selected */
+ ret = (int)H5Sget_select_npoints(sid3);
+ VERIFY(ret, 10, "H5Sget_select_npoints");
+ ret = (int)H5Sget_select_elem_npoints(sid3);
+ VERIFY(ret, 10, "H5Sget_select_elem_npoints");
+
+ /* allocate space for the element points */
+ coords = (hsize_t *)HDmalloc((size_t)ret * SPACE3_RANK * sizeof(hsize_t));
+
+ ret = H5Sget_select_elem_pointlist(sid3, (hsize_t)0, (hsize_t)ret, coords);
+ CHECK(ret, FAIL, "H5Sget_select_elem_pointlist");
+ VERIFY(coords[0], coord1[0][0], "Element Coordinates");
+ VERIFY(coords[1], coord1[1][0], "Element Coordinates");
+ VERIFY(coords[2], coord1[2][0], "Element Coordinates");
+ VERIFY(coords[3], coord1[3][0], "Element Coordinates");
+ VERIFY(coords[4], coord1[4][0], "Element Coordinates");
+ VERIFY(coords[5], coord1[5][0], "Element Coordinates");
+ VERIFY(coords[6], coord1[6][0], "Element Coordinates");
+ VERIFY(coords[7], coord1[7][0], "Element Coordinates");
+ VERIFY(coords[8], coord1[8][0], "Element Coordinates");
+ VERIFY(coords[9], coord1[9][0], "Element Coordinates");
+ HDfree(coords);
+ ret = H5Sget_select_bounds(sid3, low, high);
+ CHECK(ret, FAIL, "H5Sget_select_bounds");
+ VERIFY(low[0], 3, "Selection Bounds");
+ VERIFY(high[0], 97, "Selection Bounds");
+
+ /* Close region space */
+ ret = H5Sclose(sid3);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close first space */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close dereferenced Dataset */
+ ret = H5Dclose(dset3);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dset1);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close dataset access property list */
+ ret = H5Pclose(dapl_id);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close file access property list */
+ ret = H5Pclose(fapl);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Destroy references */
+ for(i = 0; i < 2; i++) {
+ ret = H5Rdestroy(&wbuf[i]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ ret = H5Rdestroy(&rbuf[i]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ }
+
+ /* Free memory buffers */
+ HDfree(wbuf);
+ HDfree(rbuf);
+ HDfree(dwbuf);
+ HDfree(drbuf);
+
+ }
} /* test_reference_region_1D() */
/****************************************************************
@@ -2828,7 +2868,7 @@ test_reference(void)
for(high = H5F_LIBVER_EARLIEST; high < H5F_LIBVER_NBOUNDS; high++) {
/* Invalid combinations, just continue */
- if(high <= H5F_LIBVER_V110 || high < low)
+ if(high == H5F_LIBVER_EARLIEST || high < low)
continue;
test_reference_region(low, high); /* Test basic H5R dataset region reference code */