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authorQuincey Koziol <koziol@hdfgroup.org>2008-01-13 05:37:00 (GMT)
committerQuincey Koziol <koziol@hdfgroup.org>2008-01-13 05:37:00 (GMT)
commitd6e767c21d28c9295e24dfedcbcf17c2d18006b8 (patch)
treedb928b7453fdb67016a72f1c737434166d6e773b /test
parentd9bc27b53521042e9fd648e9c0f0318d0bca4631 (diff)
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[svn-r14402] Description:
Add work-around to allow reading files that were produced with a buggy earlier version of the library, which could create objects with the wrong object header message count. There is now a configure flag "--enable-strict-format-checks" which triggers a failure on reading a file with this sort of corruption (when enabled) and allows the object to be read (when disabled). The default value for the "strict-format-checks" flag is yes when the "debug" flag is enabled and no when the "debug" flag is disabled. Note that if strict format checks are disabled (allowing objects with this particular kind of corruption to be read) and the file is opened with write access, the library will re-write the object header for the corrupt object with the correct # of object header messages. This closes bugzilla bug #1010. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
Diffstat (limited to 'test')
-rw-r--r--test/Makefile.am2
-rw-r--r--test/Makefile.in45
-rw-r--r--test/gen_bad_ohdr.c103
-rw-r--r--test/tbad_msg_count.h5bin0 -> 1984 bytes
-rw-r--r--test/tmisc.c61
5 files changed, 192 insertions, 19 deletions
diff --git a/test/Makefile.am b/test/Makefile.am
index 4f4951c..53df8bb 100644
--- a/test/Makefile.am
+++ b/test/Makefile.am
@@ -59,7 +59,7 @@ check_PROGRAMS=$(TEST_PROG) error_test err_compat testmeta
# --enable-build-all at configure time.
# The gen_old_* files can only be compiled with older versions of the library
# so do not appear in this list.
-BUILD_ALL_PROGS=gen_bogus gen_cross gen_deflate gen_filters gen_new_array \
+BUILD_ALL_PROGS=gen_bad_ohdr gen_bogus gen_cross gen_deflate gen_filters gen_new_array \
gen_new_fill gen_new_group gen_new_mtime gen_new_super gen_noencoder \
gen_nullspace gen_udlinks space_overflow
diff --git a/test/Makefile.in b/test/Makefile.in
index 84f0737..7e47249 100644
--- a/test/Makefile.in
+++ b/test/Makefile.in
@@ -81,8 +81,8 @@ am__EXEEXT_1 = testhdf5$(EXEEXT) lheap$(EXEEXT) ohdr$(EXEEXT) \
vfd$(EXEEXT) ntypes$(EXEEXT) dangle$(EXEEXT) \
dtransform$(EXEEXT) reserved$(EXEEXT) cross_read$(EXEEXT) \
btree2$(EXEEXT) fheap$(EXEEXT)
-am__EXEEXT_2 = gen_bogus$(EXEEXT) gen_cross$(EXEEXT) \
- gen_deflate$(EXEEXT) gen_filters$(EXEEXT) \
+am__EXEEXT_2 = gen_bad_ohdr$(EXEEXT) gen_bogus$(EXEEXT) \
+ gen_cross$(EXEEXT) gen_deflate$(EXEEXT) gen_filters$(EXEEXT) \
gen_new_array$(EXEEXT) gen_new_fill$(EXEEXT) \
gen_new_group$(EXEEXT) gen_new_mtime$(EXEEXT) \
gen_new_super$(EXEEXT) gen_noencoder$(EXEEXT) \
@@ -173,6 +173,10 @@ flush2_SOURCES = flush2.c
flush2_OBJECTS = flush2.$(OBJEXT)
flush2_LDADD = $(LDADD)
flush2_DEPENDENCIES = libh5test.la $(LIBHDF5)
+gen_bad_ohdr_SOURCES = gen_bad_ohdr.c
+gen_bad_ohdr_OBJECTS = gen_bad_ohdr.$(OBJEXT)
+gen_bad_ohdr_LDADD = $(LDADD)
+gen_bad_ohdr_DEPENDENCIES = libh5test.la $(LIBHDF5)
gen_bogus_SOURCES = gen_bogus.c
gen_bogus_OBJECTS = gen_bogus.$(OBJEXT)
gen_bogus_LDADD = $(LDADD)
@@ -331,24 +335,26 @@ SOURCES = $(libh5test_la_SOURCES) big.c bittests.c btree2.c cache.c \
cache_api.c cmpd_dset.c cross_read.c dangle.c dsets.c \
dt_arith.c dtransform.c dtypes.c enum.c err_compat.c \
error_test.c extend.c external.c fheap.c fillval.c flush1.c \
- flush2.c gen_bogus.c gen_cross.c gen_deflate.c gen_filters.c \
- gen_new_array.c gen_new_fill.c gen_new_group.c gen_new_mtime.c \
- gen_new_super.c gen_noencoder.c gen_nullspace.c gen_udlinks.c \
- getname.c gheap.c hyperslab.c istore.c lheap.c links.c mount.c \
- mtime.c ntypes.c objcopy.c ohdr.c pool.c reserved.c \
- set_extent.c space_overflow.c stab.c $(testhdf5_SOURCES) \
- testmeta.c $(ttsafe_SOURCES) unlink.c vfd.c
+ flush2.c gen_bad_ohdr.c gen_bogus.c gen_cross.c gen_deflate.c \
+ gen_filters.c gen_new_array.c gen_new_fill.c gen_new_group.c \
+ gen_new_mtime.c gen_new_super.c gen_noencoder.c \
+ gen_nullspace.c gen_udlinks.c getname.c gheap.c hyperslab.c \
+ istore.c lheap.c links.c mount.c mtime.c ntypes.c objcopy.c \
+ ohdr.c pool.c reserved.c set_extent.c space_overflow.c stab.c \
+ $(testhdf5_SOURCES) testmeta.c $(ttsafe_SOURCES) unlink.c \
+ vfd.c
DIST_SOURCES = $(libh5test_la_SOURCES) big.c bittests.c btree2.c \
cache.c cache_api.c cmpd_dset.c cross_read.c dangle.c dsets.c \
dt_arith.c dtransform.c dtypes.c enum.c err_compat.c \
error_test.c extend.c external.c fheap.c fillval.c flush1.c \
- flush2.c gen_bogus.c gen_cross.c gen_deflate.c gen_filters.c \
- gen_new_array.c gen_new_fill.c gen_new_group.c gen_new_mtime.c \
- gen_new_super.c gen_noencoder.c gen_nullspace.c gen_udlinks.c \
- getname.c gheap.c hyperslab.c istore.c lheap.c links.c mount.c \
- mtime.c ntypes.c objcopy.c ohdr.c pool.c reserved.c \
- set_extent.c space_overflow.c stab.c $(testhdf5_SOURCES) \
- testmeta.c $(ttsafe_SOURCES) unlink.c vfd.c
+ flush2.c gen_bad_ohdr.c gen_bogus.c gen_cross.c gen_deflate.c \
+ gen_filters.c gen_new_array.c gen_new_fill.c gen_new_group.c \
+ gen_new_mtime.c gen_new_super.c gen_noencoder.c \
+ gen_nullspace.c gen_udlinks.c getname.c gheap.c hyperslab.c \
+ istore.c lheap.c links.c mount.c mtime.c ntypes.c objcopy.c \
+ ohdr.c pool.c reserved.c set_extent.c space_overflow.c stab.c \
+ $(testhdf5_SOURCES) testmeta.c $(ttsafe_SOURCES) unlink.c \
+ vfd.c
ETAGS = etags
CTAGS = ctags
DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
@@ -470,6 +476,7 @@ SET_MAKE = @SET_MAKE@
SHELL = /bin/sh
SIZE_T = @SIZE_T@
STATIC_SHARED = @STATIC_SHARED@
+STRICT_FORMAT_CHECKS = @STRICT_FORMAT_CHECKS@
STRIP = @STRIP@
TESTPARALLEL = @TESTPARALLEL@
TIME = @TIME@
@@ -631,7 +638,7 @@ TEST_PROG = testhdf5 lheap ohdr stab gheap cache cache_api \
# --enable-build-all at configure time.
# The gen_old_* files can only be compiled with older versions of the library
# so do not appear in this list.
-BUILD_ALL_PROGS = gen_bogus gen_cross gen_deflate gen_filters gen_new_array \
+BUILD_ALL_PROGS = gen_bad_ohdr gen_bogus gen_cross gen_deflate gen_filters gen_new_array \
gen_new_fill gen_new_group gen_new_mtime gen_new_super gen_noencoder \
gen_nullspace gen_udlinks space_overflow
@@ -798,6 +805,9 @@ flush1$(EXEEXT): $(flush1_OBJECTS) $(flush1_DEPENDENCIES)
flush2$(EXEEXT): $(flush2_OBJECTS) $(flush2_DEPENDENCIES)
@rm -f flush2$(EXEEXT)
$(LINK) $(flush2_OBJECTS) $(flush2_LDADD) $(LIBS)
+gen_bad_ohdr$(EXEEXT): $(gen_bad_ohdr_OBJECTS) $(gen_bad_ohdr_DEPENDENCIES)
+ @rm -f gen_bad_ohdr$(EXEEXT)
+ $(LINK) $(gen_bad_ohdr_OBJECTS) $(gen_bad_ohdr_LDADD) $(LIBS)
gen_bogus$(EXEEXT): $(gen_bogus_OBJECTS) $(gen_bogus_DEPENDENCIES)
@rm -f gen_bogus$(EXEEXT)
$(LINK) $(gen_bogus_OBJECTS) $(gen_bogus_LDADD) $(LIBS)
@@ -926,6 +936,7 @@ distclean-compile:
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/fillval.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/flush1.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/flush2.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/gen_bad_ohdr.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/gen_bogus.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/gen_cross.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/gen_deflate.Po@am__quote@
diff --git a/test/gen_bad_ohdr.c b/test/gen_bad_ohdr.c
new file mode 100644
index 0000000..d04996d
--- /dev/null
+++ b/test/gen_bad_ohdr.c
@@ -0,0 +1,103 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the files COPYING and Copyright.html. COPYING can be found at the root *
+ * of the source code distribution tree; Copyright.html can be found at the *
+ * root level of an installed copy of the electronic HDF5 document set and *
+ * is linked from the top-level documents page. It can also be found at *
+ * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
+ * access to either file, you may request a copy from help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/*
+ * Programmer: Quincey Koziol <koziol@hdfgroup.org>
+ * Jan 5, 2008
+ *
+ * Purpose: This program is run to generate an HDF5 data file with a
+ * root group that contains the incorrect # of object header
+ * messages. It must be built/run with a copy of the library
+ * that has been built with the "H5O_ENABLE_BAD_MESG_COUNT" macro
+ * defined.
+ */
+
+#include "hdf5.h"
+#include "H5private.h"
+#include "H5Oprivate.h"
+
+#define FILENAME "tbad_msg_count.h5"
+#define GROUPNAME "Group"
+#define ATTRNAME1 "Attribute #1"
+#define ATTRNAME2 "Attribute #2"
+
+#ifndef TRUE
+#define TRUE 1
+#endif /* TRUE */
+#ifndef FALSE
+#define FALSE 0
+#endif /* FALSE */
+
+int main(void)
+{
+#ifdef H5O_ENABLE_BAD_MESG_COUNT
+ hid_t fid = -1; /* File ID */
+ hid_t gid = -1; /* Group ID */
+ hid_t sid = -1; /* Dataspace ID */
+ hid_t aid = -1; /* Attribute ID */
+ hid_t gcpl = -1; /* Group creation property list ID */
+ hbool_t store_bad_mesg_count; /* Flag for storing a bad message count */
+
+ /* Create test file */
+ if((fid = H5Fcreate(FILENAME, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto error;
+
+ /* Create group creation property list */
+ if((gcpl = H5Pcreate(H5P_GROUP_CREATE)) < 0) goto error;
+
+ /* Add property for storing bad message count */
+ store_bad_mesg_count = TRUE;
+ if(H5Pinsert2(gcpl, H5O_BAD_MESG_COUNT_NAME, H5O_BAD_MESG_COUNT_SIZE, &store_bad_mesg_count, NULL, NULL, NULL, NULL, NULL, NULL) < 0) goto error;
+
+ /* Create group with bad object header message count */
+ if((gid = H5Gcreate2(fid, GROUPNAME, H5P_DEFAULT, gcpl, H5P_DEFAULT)) < 0) goto error;
+
+ /* Close group creation property list */
+ if(H5Pclose(gcpl) < 0) goto error;
+
+ /* Create dataspace for attributes */
+ if((sid = H5Screate(H5S_SCALAR)) < 0) goto error;
+
+ /* Create attribute on root group */
+ if((aid = H5Acreate2(gid, ATTRNAME1, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto error;
+ if(H5Aclose(aid) < 0) goto error;
+
+ /* Create another attribute on root group */
+ if((aid = H5Acreate2(gid, ATTRNAME2, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto error;
+ if(H5Aclose(aid) < 0) goto error;
+
+ /* Close dataspace */
+ if(H5Sclose(sid) < 0) goto error;
+
+ /* Close group */
+ if(H5Gclose(gid) < 0) goto error;
+
+ /* Close file */
+ if(H5Fclose(fid) < 0) goto error;
+
+ return 0;
+
+error:
+ H5E_BEGIN_TRY {
+ H5Dclose(aid);
+ H5Sclose(sid);
+ H5Pclose(gcpl);
+ H5Fclose(fid);
+ } H5E_END_TRY;
+#else /* H5O_ENABLE_BAD_MESG_COUNT */
+ HDputs("H5O_BAD_MESG_COUNT compiler macro not defined!");
+#endif /* H5O_ENABLE_BAD_MESG_COUNT */
+ return 1;
+}
+
diff --git a/test/tbad_msg_count.h5 b/test/tbad_msg_count.h5
new file mode 100644
index 0000000..ca5eb65
--- /dev/null
+++ b/test/tbad_msg_count.h5
Binary files differ
diff --git a/test/tmisc.c b/test/tmisc.c
index cc4e5ec..915407c 100644
--- a/test/tmisc.c
+++ b/test/tmisc.c
@@ -295,6 +295,11 @@ unsigned m13_rdata[MISC13_DIM1][MISC13_DIM2]; /* Data read from dataset
/* Definitions for misc. test #26 */
#define MISC26_FILE "dcpl_file"
+/* Definitions for misc. test #27 */
+/* (Note that this test file is generated by the "gen_bad_ohdr.c" code) */
+#define MISC27_FILE "tbad_msg_count.h5"
+#define MISC27_GROUP "Group"
+
/****************************************************************
**
** test_misc1(): test unlinking a dataset from a group and immediately
@@ -1709,7 +1714,7 @@ test_misc10(void)
hid_t dcpl; /* Dataset creation property list */
hid_t space, type; /* Old dataset's dataspace & datatype */
char testfile[512]=""; /* Character buffer for corrected test file name */
- char *srcdir = getenv("srcdir"); /* Pointer to the directory the source code is located within */
+ char *srcdir = HDgetenv("srcdir"); /* Pointer to the directory the source code is located within */
herr_t ret;
/* Output message about test being performed */
@@ -4796,6 +4801,59 @@ test_misc26(void)
CHECK_I(ret, "H5Pclose");
}
+
+/****************************************************************
+**
+** test_misc27(): Ensure that objects with incorrect # of object
+** header messages are handled appropriately.
+**
+** (Note that this test file is generated by the "gen_bad_ohdr.c" code)
+**
+****************************************************************/
+static void
+test_misc27(void)
+{
+ hid_t fid; /* File ID */
+ hid_t gid; /* Group ID */
+ char testfile[512]=""; /* Character buffer for corrected test file name */
+ char *srcdir = HDgetenv("srcdir"); /* Pointer to the directory the source code is located within */
+ herr_t ret; /* Generic return value */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Corrupt object header handling\n"));
+
+ /* Generate the correct name for the test file, by prepending the source path */
+ if(srcdir && ((HDstrlen(srcdir) + HDstrlen(MISC27_FILE) + 1) < sizeof(testfile))) {
+ HDstrcpy(testfile, srcdir);
+ HDstrcat(testfile, "/");
+ }
+ HDstrcat(testfile, MISC27_FILE);
+
+ /* Open the file */
+ fid = H5Fopen(testfile, H5F_ACC_RDONLY, H5P_DEFAULT);
+ CHECK(fid, FAIL, "H5Fopen");
+
+#ifdef H5_STRICT_FORMAT_CHECKS
+ /* Open group with incorrect # of object header messages (should fail) */
+ H5E_BEGIN_TRY {
+ gid = H5Gopen2(fid, MISC27_GROUP, H5P_DEFAULT);
+ } H5E_END_TRY;
+ VERIFY(gid, FAIL, "H5Gopen2");
+#else /* H5_STRICT_FORMAT_CHECKS */
+ /* Open group with incorrect # of object header messages */
+ gid = H5Gopen2(fid, MISC27_GROUP, H5P_DEFAULT);
+ CHECK(gid, FAIL, "H5Gopen2");
+
+ /* Close group */
+ ret = H5Gclose(gid);
+ CHECK(ret, FAIL, "H5Gclose");
+#endif /* H5_STRICT_FORMAT_CHECKS */
+
+ /* Close file */
+ ret = H5Fclose(fid);
+ CHECK(ret, FAIL, "H5Fclose");
+} /* end test_misc27() */
+
/****************************************************************
**
** test_misc(): Main misc. test routine.
@@ -4837,6 +4895,7 @@ test_misc(void)
test_misc25b(); /* Exercise null object header message merge bug on existing file */
test_misc25c(); /* Exercise another null object header message merge bug */
test_misc26(); /* Test closing property lists with long filter pipelines */
+ test_misc27(); /* Test opening file with object that has bad # of object header messages */
} /* test_misc() */