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author | Raymond Lu <songyulu@hdfgroup.org> | 2008-07-22 20:36:31 (GMT) |
---|---|---|
committer | Raymond Lu <songyulu@hdfgroup.org> | 2008-07-22 20:36:31 (GMT) |
commit | 8704820d1c56165fcf930ab21adebea0a48c664f (patch) | |
tree | b74991b3c84c1a6d52e1003c7668863b1fd3dfb4 /test | |
parent | 717388ea0683ff9db970cd8f8998ba9b94d62cf0 (diff) | |
download | hdf5-8704820d1c56165fcf930ab21adebea0a48c664f.zip hdf5-8704820d1c56165fcf930ab21adebea0a48c664f.tar.gz hdf5-8704820d1c56165fcf930ab21adebea0a48c664f.tar.bz2 |
[svn-r15395] When an attribute was opened twice and data was written with one of the handles,
the file didn't have the data. It happened because each handle had its own
object structure, and the empty one overwrote the data with fill value. This is
fixed by making some attribute information like the data be shared in the
attribute structure.
Tested on smirom, kagiso, and linew.
Diffstat (limited to 'test')
-rw-r--r-- | test/dtypes.c | 1 | ||||
-rwxr-xr-x | test/objcopy.c | 2 | ||||
-rw-r--r-- | test/tattr.c | 777 | ||||
-rw-r--r-- | test/testhdf5.c | 2 | ||||
-rw-r--r-- | test/tsohm.c | 49 |
5 files changed, 826 insertions, 5 deletions
diff --git a/test/dtypes.c b/test/dtypes.c index ed1b049..f7802ed 100644 --- a/test/dtypes.c +++ b/test/dtypes.c @@ -5041,6 +5041,7 @@ main(void) nerrors += test_detect(); nerrors += test_compound_1(); nerrors += test_query(); + nerrors += test_transient(fapl); nerrors += test_named(fapl); nerrors += test_encode(); diff --git a/test/objcopy.c b/test/objcopy.c index 2196794..6459519 100755 --- a/test/objcopy.c +++ b/test/objcopy.c @@ -7226,6 +7226,7 @@ main(void) nerrors += test_copy_dataset_simple_empty(fcpl_src, fcpl_dst, my_fapl); nerrors += test_copy_dataset_compound(fcpl_src, fcpl_dst, my_fapl); nerrors += test_copy_dataset_chunked(fcpl_src, fcpl_dst, my_fapl); + nerrors += test_copy_dataset_chunked_empty(fcpl_src, fcpl_dst, my_fapl); nerrors += test_copy_dataset_chunked_sparse(fcpl_src, fcpl_dst, my_fapl); nerrors += test_copy_dataset_compressed(fcpl_src, fcpl_dst, my_fapl); @@ -7236,6 +7237,7 @@ main(void) nerrors += test_copy_dataset_named_dtype_hier_outside(fcpl_src, fcpl_dst, my_fapl); nerrors += test_copy_dataset_multi_ohdr_chunks(fcpl_src, fcpl_dst, my_fapl); nerrors += test_copy_dataset_attr_named_dtype(fcpl_src, fcpl_dst, my_fapl); + nerrors += test_copy_dataset_contig_vl(fcpl_src, fcpl_dst, my_fapl); nerrors += test_copy_dataset_chunked_vl(fcpl_src, fcpl_dst, my_fapl); nerrors += test_copy_dataset_compact_vl(fcpl_src, fcpl_dst, my_fapl); diff --git a/test/tattr.c b/test/tattr.c index 12350c3..edaebf0 100644 --- a/test/tattr.c +++ b/test/tattr.c @@ -191,7 +191,6 @@ test_attr_basic_write(hid_t fapl) sid2 = H5Screate_simple(ATTR1_RANK, dims2, NULL); CHECK(sid2, FAIL, "H5Screate_simple"); - /* Try to create an attribute on the file (should create an attribute on root group) */ attr = H5Acreate2(fid1, ATTR1_NAME, H5T_NATIVE_INT, sid2, H5P_DEFAULT, H5P_DEFAULT); CHECK(attr, FAIL, "H5Acreate2"); @@ -216,7 +215,6 @@ test_attr_basic_write(hid_t fapl) ret = H5Gclose(group); CHECK(ret, FAIL, "H5Gclose"); - /* Create an attribute for the dataset */ attr = H5Acreate2(dataset, ATTR1_NAME, H5T_NATIVE_INT, sid2, H5P_DEFAULT, H5P_DEFAULT); CHECK(attr, FAIL, "H5Acreate2"); @@ -1779,6 +1777,251 @@ test_attr_dtype_shared(hid_t fapl) /**************************************************************** ** +** test_attr_duplicate_ids(): Test operations with more than +** one ID handles. +** +****************************************************************/ +static int +test_attr_duplicate_ids(hid_t fapl) +{ + hid_t fid1; /* HDF5 File IDs */ + hid_t dataset; /* Dataset ID */ + hid_t gid1, gid2; /* Group ID */ + hid_t sid1,sid2; /* Dataspace ID */ + hid_t attr, attr2; /* Attribute ID */ + hsize_t dims1[] = {SPACE1_DIM1, SPACE1_DIM2, SPACE1_DIM3}; + hsize_t dims2[] = {ATTR1_DIM1}; + int read_data1[ATTR1_DIM1]={0}; /* Buffer for reading 1st attribute */ + int rewrite_data[ATTR1_DIM1]={1234, -423, 9907256}; /* Test data for rewrite */ + int i; + herr_t ret; /* Generic return value */ + + /* Output message about test being performed */ + MESSAGE(5, ("Testing operations with two ID handles\n")); + + /*----------------------------------------------------------------------------------- + * Create an attribute in a new file and fill it with fill value. + */ + /* Create file */ + fid1 = H5Fcreate(FILENAME, H5F_ACC_TRUNC, H5P_DEFAULT, fapl); + CHECK(fid1, FAIL, "H5Fcreate"); + + /* Create dataspace for dataset */ + sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL); + CHECK(sid1, FAIL, "H5Screate_simple"); + + /* Create a dataset */ + dataset = H5Dcreate2(fid1, DSET1_NAME, H5T_NATIVE_UCHAR, sid1, H5P_DEFAULT, + H5P_DEFAULT, H5P_DEFAULT); + CHECK(dataset, FAIL, "H5Dcreate2"); + + /* Create dataspace for attribute */ + sid2 = H5Screate_simple(ATTR1_RANK, dims2, NULL); + CHECK(sid2, FAIL, "H5Screate_simple"); + + /* Try to create an attribute on the dataset */ + attr = H5Acreate2(dataset, ATTR1_NAME, H5T_NATIVE_INT, sid2, H5P_DEFAULT, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Acreate2"); + + /* Open the attribute just created and get a second ID */ + attr2 = H5Aopen(dataset, ATTR1_NAME, H5P_DEFAULT); + CHECK(attr2, FAIL, "H5Aopen"); + + /* Close attribute */ + ret = H5Aclose(attr2); + CHECK(ret, FAIL, "H5Aclose"); + + /* Close attribute */ + ret = H5Aclose(attr); + CHECK(ret, FAIL, "H5Aclose"); + + /* Close Dataset */ + ret = H5Dclose(dataset); + CHECK(ret, FAIL, "H5Dclose"); + + /* Close file */ + ret = H5Fclose(fid1); + CHECK(ret, FAIL, "H5Fclose"); + + /*----------------------------------------------------------------------------------- + * Reopen the file and verify the fill value for attribute. Also write + * some real data. + */ + + /* Open file */ + fid1 = H5Fopen(FILENAME, H5F_ACC_RDWR, fapl); + CHECK(fid1, FAIL, "H5Fopen"); + + /* Open the dataset */ + dataset = H5Dopen2(fid1, DSET1_NAME, H5P_DEFAULT); + CHECK(dataset, FAIL, "H5Dopen2"); + + /* Open first attribute for the dataset */ + attr = H5Aopen(dataset, ATTR1_NAME, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Aopen"); + + /* Read attribute with fill value */ + ret = H5Aread(attr, H5T_NATIVE_INT, read_data1); + CHECK(ret, FAIL, "H5Aread"); + + /* Verify values read in */ + for(i = 0; i < ATTR1_DIM1; i++) + if(0 != read_data1[i]) + TestErrPrintf("%d: attribute data different: read_data1[%d]=%d\n", __LINE__, i, read_data1[i]); + + /* Open attribute for the second time */ + attr2 = H5Aopen(dataset, ATTR1_NAME, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Aopen"); + + /* Write attribute information */ + ret = H5Awrite(attr2, H5T_NATIVE_INT, attr_data1); + CHECK(ret, FAIL, "H5Awrite"); + + /* Close attribute */ + ret = H5Aclose(attr2); + CHECK(ret, FAIL, "H5Aclose"); + + /* Close attribute */ + ret = H5Aclose(attr); + CHECK(ret, FAIL, "H5Aclose"); + + /* Close Dataset */ + ret = H5Dclose(dataset); + CHECK(ret, FAIL, "H5Dclose"); + + /* Close file */ + ret = H5Fclose(fid1); + CHECK(ret, FAIL, "H5Fclose"); + + /*----------------------------------------------------------------------------------- + * Reopen the file and verify the data. Also rewrite the data and verify it. + */ + + /* Open file */ + fid1 = H5Fopen(FILENAME, H5F_ACC_RDWR, fapl); + CHECK(fid1, FAIL, "H5Fopen"); + + /* Open the dataset */ + dataset = H5Dopen2(fid1, DSET1_NAME, H5P_DEFAULT); + CHECK(dataset, FAIL, "H5Dopen2"); + + /* Open first attribute for the dataset */ + attr = H5Aopen(dataset, ATTR1_NAME, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Aopen"); + + /* Read attribute information */ + ret = H5Aread(attr, H5T_NATIVE_INT, read_data1); + CHECK(ret, FAIL, "H5Aread"); + + /* Verify values read in */ + for(i = 0; i < ATTR1_DIM1; i++) + if(attr_data1[i] != read_data1[i]) + TestErrPrintf("%d: attribute data different: attr_data1[%d]=%d, read_data1[%d]=%d\n", __LINE__, i, attr_data1[i], i, read_data1[i]); + + /* Open attribute for the second time */ + attr2 = H5Aopen(dataset, ATTR1_NAME, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Aopen"); + + /* Write attribute information */ + ret = H5Awrite(attr2, H5T_NATIVE_INT, rewrite_data); + CHECK(ret, FAIL, "H5Awrite"); + + /* Read attribute information */ + ret = H5Aread(attr, H5T_NATIVE_INT, read_data1); + CHECK(ret, FAIL, "H5Aread"); + + /* Verify values read in */ + for(i = 0; i < ATTR1_DIM1; i++) + if(read_data1[i] != rewrite_data[i]) + TestErrPrintf("%d: attribute data different: read_data1[%d]=%d, rewrite_data[%d]=%d\n", __LINE__, i, read_data1[i], i, rewrite_data[i]); + + /* Close attribute */ + ret = H5Aclose(attr); + CHECK(ret, FAIL, "H5Aclose"); + + ret = H5Aclose(attr2); + CHECK(ret, FAIL, "H5Aclose"); + + /* Close Dataset */ + ret = H5Dclose(dataset); + CHECK(ret, FAIL, "H5Dclose"); + + /* Close file */ + ret = H5Fclose(fid1); + CHECK(ret, FAIL, "H5Fclose"); + + /*----------------------------------------------------------------------------------- + * Verify that the attribute being pointed to by different paths shares + * the same data. + */ + /* Open file */ + fid1 = H5Fopen(FILENAME, H5F_ACC_RDWR, fapl); + CHECK(fid1, FAIL, "H5Fopen"); + + /* Create a group */ + gid1 = H5Gcreate2(fid1, GROUP1_NAME, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + CHECK(gid1, FAIL, "H5Gcreate2"); + + /* Create hard link to the first group */ + ret = H5Lcreate_hard(gid1, GROUP1_NAME, H5L_SAME_LOC, GROUP2_NAME, H5P_DEFAULT, + H5P_DEFAULT); + CHECK(ret, FAIL, "H5Lcreate_hard"); + + /* Try to create an attribute on the group */ + attr = H5Acreate2(gid1, ATTR2_NAME, H5T_NATIVE_INT, sid2, H5P_DEFAULT, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Acreate2"); + + /* Open the hard link just created */ + gid2 = H5Gopen2(fid1, GROUP2_NAME, H5P_DEFAULT); + CHECK(gid2, FAIL, "H5Gopen2"); + + /* Open the attribute of the group for the second time */ + attr2 = H5Aopen(gid2, ATTR2_NAME, H5P_DEFAULT); + CHECK(attr2, FAIL, "H5Aopen"); + + /* Write attribute information with the first attribute handle */ + ret = H5Awrite(attr, H5T_NATIVE_INT, attr_data1); + CHECK(ret, FAIL, "H5Awrite"); + + /* Read attribute information with the second attribute handle */ + ret = H5Aread(attr2, H5T_NATIVE_INT, read_data1); + CHECK(ret, FAIL, "H5Aread"); + + /* Verify values read in */ + for(i = 0; i < ATTR1_DIM1; i++) + if(attr_data1[i] != read_data1[i]) + TestErrPrintf("%d: attribute data different: attr_data1[%d]=%d, read_data1[%d]=%d\n", __LINE__, i, attr_data1[i], i, read_data1[i]); + + /* Close attribute */ + ret = H5Aclose(attr); + CHECK(ret, FAIL, "H5Aclose"); + + ret = H5Aclose(attr2); + CHECK(ret, FAIL, "H5Aclose"); + + /* Close group */ + ret = H5Gclose(gid1); + CHECK(ret, FAIL, "H5Gclose"); + + ret = H5Gclose(gid2); + CHECK(ret, FAIL, "H5Gclose"); + + /* Close Attribute dataspace */ + ret = H5Sclose(sid2); + CHECK(ret, FAIL, "H5Sclose"); + + /* Close Dataset dataspace */ + ret = H5Sclose(sid1); + CHECK(ret, FAIL, "H5Sclose"); + + /* Close file */ + ret = H5Fclose(fid1); + CHECK(ret, FAIL, "H5Fclose"); +} /* test_attr_duplicate_ids() */ + + +/**************************************************************** +** ** test_attr_dense_verify(): Test basic H5A (attribute) code. ** Verify attributes on object ** @@ -2751,6 +2994,529 @@ test_attr_dense_limits(hid_t fcpl, hid_t fapl) /**************************************************************** ** +** test_attr_dense_dup_ids(): Test operations with multiple ID +** handles with "dense" attribute storage creation +** +****************************************************************/ +static void +test_attr_dense_dup_ids(hid_t fcpl, hid_t fapl) +{ + hid_t fid; /* HDF5 File ID */ + hid_t dataset; /* Dataset ID */ + hid_t gid1, gid2; /* Group ID */ + hid_t sid, sid2; /* Dataspace ID */ + hid_t attr, attr2, add_attr; /* Attribute ID */ + hid_t dcpl; /* Dataset creation property list ID */ + char attrname[NAME_BUF_SIZE]; /* Name of attribute */ + hsize_t dims[] = {ATTR1_DIM1}; + int read_data1[ATTR1_DIM1]={0}; /* Buffer for reading attribute */ + int rewrite_data[ATTR1_DIM1]={1234, -423, 9907256}; /* Test data for rewrite */ + unsigned scalar_data = 1317; /* scalar data for attribute */ + unsigned read_scalar; /* variable for reading attribute*/ + unsigned max_compact; /* Maximum # of attributes to store compactly */ + unsigned min_dense; /* Minimum # of attributes to store "densely" */ + htri_t is_dense; /* Are attributes stored densely? */ + unsigned u, i; /* Local index variable */ + herr_t ret; /* Generic return value */ + + /* Output message about test being performed */ + MESSAGE(5, ("Testing operations with two IDs for Dense Storage\n")); + + /*----------------------------------------------------------------------------------- + * Create an attribute in dense storage and fill it with fill value. + */ + /* Create file */ + fid = H5Fcreate(FILENAME, H5F_ACC_TRUNC, fcpl, fapl); + CHECK(fid, FAIL, "H5Fcreate"); + + /* Close file */ + ret = H5Fclose(fid); + CHECK(ret, FAIL, "H5Fclose"); + + /* Re-open file */ + fid = H5Fopen(FILENAME, H5F_ACC_RDWR, fapl); + CHECK(fid, FAIL, "H5Fopen"); + + /* Create dataspace for dataset */ + sid = H5Screate(H5S_SCALAR); + CHECK(sid, FAIL, "H5Screate"); + + /* Query the group creation properties */ + dcpl = H5Pcreate(H5P_DATASET_CREATE); + CHECK(dcpl, FAIL, "H5Pcreate"); + + /* Create a dataset */ + dataset = H5Dcreate2(fid, DSET1_NAME, H5T_NATIVE_UCHAR, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT); + CHECK(dataset, FAIL, "H5Dcreate2"); + + /* Retrieve limits for compact/dense attribute storage */ + ret = H5Pget_attr_phase_change(dcpl, &max_compact, &min_dense); + CHECK(ret, FAIL, "H5Pget_attr_phase_change"); + + /* Close property list */ + ret = H5Pclose(dcpl); + CHECK(ret, FAIL, "H5Pclose"); + + /* Check on dataset's attribute storage status */ + is_dense = H5O_is_attr_dense_test(dataset); + VERIFY(is_dense, FALSE, "H5O_is_attr_dense_test"); + + /* Add attributes, until just before converting to dense storage */ + for(u = 0; u < max_compact; u++) { + /* Create attribute */ + sprintf(attrname, "attr %02u", u); + attr = H5Acreate2(dataset, attrname, H5T_NATIVE_UINT, sid, H5P_DEFAULT, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Acreate2"); + + /* Write data into the attribute */ + ret = H5Awrite(attr, H5T_NATIVE_UINT, &u); + CHECK(ret, FAIL, "H5Awrite"); + + /* Close attribute */ + ret = H5Aclose(attr); + CHECK(ret, FAIL, "H5Aclose"); + } /* end for */ + + /* Check on dataset's attribute storage status */ + is_dense = H5O_is_attr_dense_test(dataset); + VERIFY(is_dense, FALSE, "H5O_is_attr_dense_test"); + + /* Add one more attribute, to push into "dense" storage */ + /* Create dataspace for attribute */ + sid2 = H5Screate_simple(ATTR1_RANK, dims, NULL); + CHECK(sid2, FAIL, "H5Screate_simple"); + + /* Create attribute */ + sprintf(attrname, "attr %02u", u); + attr = H5Acreate2(dataset, attrname, H5T_NATIVE_INT, sid2, H5P_DEFAULT, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Acreate2"); + + /* Check on dataset's attribute storage status */ + is_dense = H5O_is_attr_dense_test(dataset); + VERIFY(is_dense, TRUE, "H5O_is_attr_dense_test"); + + /* Open the attribute just created and get a second ID */ + attr2 = H5Aopen(dataset, attrname, H5P_DEFAULT); + CHECK(attr2, FAIL, "H5Aopen"); + + /* Close attribute */ + ret = H5Aclose(attr); + CHECK(ret, FAIL, "H5Aclose"); + + ret = H5Aclose(attr2); + CHECK(ret, FAIL, "H5Aclose"); + + /* Close Dataset */ + ret = H5Dclose(dataset); + CHECK(ret, FAIL, "H5Dclose"); + + /* Close file */ + ret = H5Fclose(fid); + CHECK(ret, FAIL, "H5Fclose"); + + /*----------------------------------------------------------------------------------- + * Reopen the file and verify the fill value for attribute. Also write + * some real data. + */ + /* Open file */ + fid = H5Fopen(FILENAME, H5F_ACC_RDWR, fapl); + CHECK(fid, FAIL, "H5Fopen"); + + /* Open the dataset */ + dataset = H5Dopen2(fid, DSET1_NAME, H5P_DEFAULT); + CHECK(dataset, FAIL, "H5Dopen2"); + + /* Check on dataset's attribute storage status */ + is_dense = H5O_is_attr_dense_test(dataset); + VERIFY(is_dense, TRUE, "H5O_is_attr_dense_test"); + + /* Open first attribute for the dataset */ + attr = H5Aopen(dataset, attrname, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Aopen"); + + /* Read attribute with fill value */ + ret = H5Aread(attr, H5T_NATIVE_INT, read_data1); + CHECK(ret, FAIL, "H5Aread"); + + /* Verify values read in */ + for(i = 0; i < ATTR1_DIM1; i++) + if(0 != read_data1[i]) + TestErrPrintf("%d: attribute data different: read_data1[%d]=%d\n", __LINE__, + i, read_data1[i]); + + /* Open attribute for the second time */ + attr2 = H5Aopen(dataset, attrname, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Aopen"); + + /* Write attribute information */ + ret = H5Awrite(attr2, H5T_NATIVE_INT, attr_data1); + CHECK(ret, FAIL, "H5Awrite"); + + /* Close attribute */ + ret = H5Aclose(attr2); + CHECK(ret, FAIL, "H5Aclose"); + + /* Close attribute */ + ret = H5Aclose(attr); + CHECK(ret, FAIL, "H5Aclose"); + + /* Close Dataset */ + ret = H5Dclose(dataset); + CHECK(ret, FAIL, "H5Dclose"); + + /* Close file */ + ret = H5Fclose(fid); + CHECK(ret, FAIL, "H5Fclose"); + + /*----------------------------------------------------------------------------------- + * Reopen the file and verify the data. Also rewrite the data and verify it. + */ + /* Open file */ + fid = H5Fopen(FILENAME, H5F_ACC_RDWR, fapl); + CHECK(fid, FAIL, "H5Fopen"); + + /* Open the dataset */ + dataset = H5Dopen2(fid, DSET1_NAME, H5P_DEFAULT); + CHECK(dataset, FAIL, "H5Dopen2"); + + /* Check on dataset's attribute storage status */ + is_dense = H5O_is_attr_dense_test(dataset); + VERIFY(is_dense, TRUE, "H5O_is_attr_dense_test"); + + /* Open first attribute for the dataset */ + attr = H5Aopen(dataset, attrname, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Aopen"); + + /* Read attribute information */ + ret = H5Aread(attr, H5T_NATIVE_INT, read_data1); + CHECK(ret, FAIL, "H5Aread"); + + /* Verify values read in */ + for(i = 0; i < ATTR1_DIM1; i++) + if(attr_data1[i] != read_data1[i]) + TestErrPrintf("%d: attribute data different: attr_data1[%d]=%d, read_data1[%d]=%d\n", __LINE__, i, attr_data1[i], i, read_data1[i]); + + /* Open attribute for the second time */ + attr2 = H5Aopen(dataset, attrname, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Aopen"); + + /* Write attribute information with the second ID */ + ret = H5Awrite(attr2, H5T_NATIVE_INT, rewrite_data); + CHECK(ret, FAIL, "H5Awrite"); + + /* Read attribute information with the first ID */ + ret = H5Aread(attr, H5T_NATIVE_INT, read_data1); + CHECK(ret, FAIL, "H5Aread"); + + /* Verify values read in */ + for(i = 0; i < ATTR1_DIM1; i++) + if(read_data1[i] != rewrite_data[i]) + TestErrPrintf("%d: attribute data different: read_data1[%d]=%d, rewrite_data[%d]=%d\n", __LINE__, i, read_data1[i], i, rewrite_data[i]); + + /* Close attribute */ + ret = H5Aclose(attr); + CHECK(ret, FAIL, "H5Aclose"); + + ret = H5Aclose(attr2); + CHECK(ret, FAIL, "H5Aclose"); + + /* Close Dataset */ + ret = H5Dclose(dataset); + CHECK(ret, FAIL, "H5Dclose"); + + /* Close file */ + ret = H5Fclose(fid); + CHECK(ret, FAIL, "H5Fclose"); + + /*----------------------------------------------------------------------------------- + * Open the attribute by index. Verify the data is shared when the attribute + * is opened twice. + */ + /* Open file */ + fid = H5Fopen(FILENAME, H5F_ACC_RDWR, fapl); + CHECK(fid, FAIL, "H5Fopen"); + + /* Open the dataset */ + dataset = H5Dopen2(fid, DSET1_NAME, H5P_DEFAULT); + CHECK(dataset, FAIL, "H5Dopen2"); + + /* Check on dataset's attribute storage status */ + is_dense = H5O_is_attr_dense_test(dataset); + VERIFY(is_dense, TRUE, "H5O_is_attr_dense_test"); + + /* Open first attribute for the dataset */ + attr = H5Aopen_by_idx(dataset, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)4, + H5P_DEFAULT, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Aopen"); + + /* Open attribute for the second time */ + attr2 = H5Aopen_by_idx(dataset, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)4, + H5P_DEFAULT, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Aopen"); + + /* Write attribute information with the second ID */ + ret = H5Awrite(attr2, H5T_NATIVE_UINT, &scalar_data); + CHECK(ret, FAIL, "H5Awrite"); + + /* Read attribute information with the first ID */ + ret = H5Aread(attr, H5T_NATIVE_INT, &read_scalar); + CHECK(ret, FAIL, "H5Aread"); + + /* Verify values read in */ + if(read_scalar != scalar_data) + TestErrPrintf("%d: attribute data different: read_scalar=%d, scalar_data=%d\n", + __LINE__, read_scalar, scalar_data); + + /* Close attribute */ + ret = H5Aclose(attr); + CHECK(ret, FAIL, "H5Aclose"); + + ret = H5Aclose(attr2); + CHECK(ret, FAIL, "H5Aclose"); + + /* Close Dataset */ + ret = H5Dclose(dataset); + CHECK(ret, FAIL, "H5Dclose"); + + /* Close file */ + ret = H5Fclose(fid); + CHECK(ret, FAIL, "H5Fclose"); + + /*----------------------------------------------------------------------------------- + * Open one attribute. As it remains open, delete some attributes. The + * attribute storage should switch from dense to compact. Then open the + * same attribute for the second time and verify that the attribute data + * is shared. + */ + /* Open file */ + fid = H5Fopen(FILENAME, H5F_ACC_RDWR, fapl); + CHECK(fid, FAIL, "H5Fopen"); + + /* Open the dataset */ + dataset = H5Dopen2(fid, DSET1_NAME, H5P_DEFAULT); + CHECK(dataset, FAIL, "H5Dopen2"); + + /* Check on dataset's attribute storage status */ + is_dense = H5O_is_attr_dense_test(dataset); + VERIFY(is_dense, TRUE, "H5O_is_attr_dense_test"); + + /* Open attribute of the dataset for the first time */ + attr = H5Aopen_by_idx(dataset, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)2, + H5P_DEFAULT, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Aopen"); + + /* Delete a few attributes until the storage switches to compact */ + for(u = max_compact; u >= min_dense - 1; u--) { + ret = H5Adelete_by_idx(dataset, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)u, + H5P_DEFAULT); + CHECK(ret, FAIL, "H5Adelete_by_idx"); + } + + /* Check on dataset's attribute storage status */ + is_dense = H5O_is_attr_dense_test(dataset); + VERIFY(is_dense, FALSE, "H5O_is_attr_dense_test"); + + /* Open attribute for the second time */ + attr2 = H5Aopen_by_idx(dataset, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)2, + H5P_DEFAULT, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Aopen"); + + /* Write attribute information with the second ID */ + ret = H5Awrite(attr2, H5T_NATIVE_UINT, &scalar_data); + CHECK(ret, FAIL, "H5Awrite"); + + /* Read attribute information with the first ID */ + ret = H5Aread(attr, H5T_NATIVE_INT, &read_scalar); + CHECK(ret, FAIL, "H5Aread"); + + /* Verify values read in */ + if(read_scalar != scalar_data) + TestErrPrintf("%d: attribute data different: read_scalar=%d, scalar_data=%d\n", + __LINE__, read_scalar, scalar_data); + + /* Close attribute */ + ret = H5Aclose(attr); + CHECK(ret, FAIL, "H5Aclose"); + + ret = H5Aclose(attr2); + CHECK(ret, FAIL, "H5Aclose"); + + /* Close Dataset */ + ret = H5Dclose(dataset); + CHECK(ret, FAIL, "H5Dclose"); + + /* Close file */ + ret = H5Fclose(fid); + CHECK(ret, FAIL, "H5Fclose"); + + /*----------------------------------------------------------------------------------- + * Open one attribute. As it remains open, create some attributes. The + * attribute storage should switch from compact to dense. Then open the + * same attribute for the second time and verify that the attribute data + * is shared. + */ + /* Open file */ + fid = H5Fopen(FILENAME, H5F_ACC_RDWR, fapl); + CHECK(fid, FAIL, "H5Fopen"); + + /* Open the dataset */ + dataset = H5Dopen2(fid, DSET1_NAME, H5P_DEFAULT); + CHECK(dataset, FAIL, "H5Dopen2"); + + /* Check on dataset's attribute storage status */ + is_dense = H5O_is_attr_dense_test(dataset); + VERIFY(is_dense, FALSE, "H5O_is_attr_dense_test"); + + /* Open attribute of the dataset for the first time */ + attr = H5Aopen_by_idx(dataset, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)3, + H5P_DEFAULT, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Aopen"); + + /* Delete a few attributes until the storage switches to compact */ + for(u = min_dense-1; u <= max_compact; u++) { + /* Create attribute */ + sprintf(attrname, "attr %02u", u); + add_attr = H5Acreate2(dataset, attrname, H5T_NATIVE_UINT, sid, H5P_DEFAULT, H5P_DEFAULT); + CHECK(add_attr, FAIL, "H5Acreate2"); + + /* Write data into the attribute */ + ret = H5Awrite(add_attr, H5T_NATIVE_UINT, &u); + CHECK(ret, FAIL, "H5Awrite"); + + /* Close attribute */ + ret = H5Aclose(add_attr); + CHECK(ret, FAIL, "H5Aclose"); + } + + /* Check on dataset's attribute storage status */ + is_dense = H5O_is_attr_dense_test(dataset); + VERIFY(is_dense, TRUE, "H5O_is_attr_dense_test"); + + /* Open attribute for the second time */ + attr2 = H5Aopen_by_idx(dataset, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)3, + H5P_DEFAULT, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Aopen"); + + /* Write attribute information with the second ID */ + ret = H5Awrite(attr2, H5T_NATIVE_UINT, &scalar_data); + CHECK(ret, FAIL, "H5Awrite"); + + /* Read attribute information with the first ID */ + ret = H5Aread(attr, H5T_NATIVE_INT, &read_scalar); + CHECK(ret, FAIL, "H5Aread"); + + /* Verify values read in */ + if(read_scalar != scalar_data) + TestErrPrintf("%d: attribute data different: read_scalar=%d, scalar_data=%d\n", + __LINE__, read_scalar, scalar_data); + + /* Close attribute */ + ret = H5Aclose(attr); + CHECK(ret, FAIL, "H5Aclose"); + + ret = H5Aclose(attr2); + CHECK(ret, FAIL, "H5Aclose"); + + /* Close Dataset */ + ret = H5Dclose(dataset); + CHECK(ret, FAIL, "H5Dclose"); + + /* Close file */ + ret = H5Fclose(fid); + CHECK(ret, FAIL, "H5Fclose"); + + /*----------------------------------------------------------------------------------- + * Verify that the attribute being pointed to by different paths shares + * the same data. + */ + /* Open file */ + fid = H5Fopen(FILENAME, H5F_ACC_RDWR, fapl); + CHECK(fid, FAIL, "H5Fopen"); + + /* Create a group */ + gid1 = H5Gcreate2(fid, GROUP1_NAME, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + CHECK(gid1, FAIL, "H5Gcreate2"); + + /* Create hard link to the first group */ + ret = H5Lcreate_hard(gid1, GROUP1_NAME, H5L_SAME_LOC, GROUP2_NAME, H5P_DEFAULT, + H5P_DEFAULT); + CHECK(ret, FAIL, "H5Lcreate_hard"); + + /* Add attributes, until just before converting to dense storage */ + for(u = 0; u < max_compact; u++) { + /* Create attribute */ + sprintf(attrname, "attr %02u", u); + attr = H5Acreate2(gid1, attrname, H5T_NATIVE_UINT, sid, H5P_DEFAULT, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Acreate2"); + + /* Write data into the attribute */ + ret = H5Awrite(attr, H5T_NATIVE_UINT, &u); + CHECK(ret, FAIL, "H5Awrite"); + + /* Close attribute */ + ret = H5Aclose(attr); + CHECK(ret, FAIL, "H5Aclose"); + } /* end for */ + + /* Try to create another attribute to make dense storage */ + attr = H5Acreate2(gid1, ATTR2_NAME, H5T_NATIVE_INT, sid2, H5P_DEFAULT, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Acreate2"); + + /* Check on group's attribute storage status */ + is_dense = H5O_is_attr_dense_test(gid1); + VERIFY(is_dense, TRUE, "H5O_is_attr_dense_test"); + + /* Open the hard link just created */ + gid2 = H5Gopen2(fid, GROUP2_NAME, H5P_DEFAULT); + CHECK(gid2, FAIL, "H5Gopen2"); + + /* Open the attribute of the group for the second time */ + attr2 = H5Aopen(gid2, ATTR2_NAME, H5P_DEFAULT); + CHECK(attr2, FAIL, "H5Aopen"); + + /* Write attribute information with the first attribute handle */ + ret = H5Awrite(attr, H5T_NATIVE_INT, attr_data1); + CHECK(ret, FAIL, "H5Awrite"); + + /* Read attribute information with the second attribute handle */ + ret = H5Aread(attr2, H5T_NATIVE_INT, read_data1); + CHECK(ret, FAIL, "H5Aread"); + + /* Verify values read in */ + for(i = 0; i < ATTR1_DIM1; i++) + if(attr_data1[i] != read_data1[i]) + TestErrPrintf("%d: attribute data different: attr_data1[%d]=%d, read_data1[%d]=%d\n", __LINE__, i, attr_data1[i], i, read_data1[i]); + + /* Close attribute */ + ret = H5Aclose(attr); + CHECK(ret, FAIL, "H5Aclose"); + + ret = H5Aclose(attr2); + CHECK(ret, FAIL, "H5Aclose"); + + /* Close group */ + ret = H5Gclose(gid1); + CHECK(ret, FAIL, "H5Gclose"); + + ret = H5Gclose(gid2); + CHECK(ret, FAIL, "H5Gclose"); + + /* Close Attribute dataspace */ + ret = H5Sclose(sid); + CHECK(ret, FAIL, "H5Sclose"); + + /* Close Dataset dataspace */ + ret = H5Sclose(sid2); + CHECK(ret, FAIL, "H5Sclose"); + + /* Close file */ + ret = H5Fclose(fid); + CHECK(ret, FAIL, "H5Fclose"); +} /* test_attr_dense_dup_ids() */ + + +/**************************************************************** +** ** test_attr_big(): Test basic H5A (attribute) code. ** Tests storing "big" attribute in dense storage immediately, if available ** @@ -6077,7 +6843,7 @@ test_attr_iterate2(hbool_t new_format, hid_t fcpl, hid_t fapl) /* Allocate the "visited link" array */ iter_info.max_visit = max_compact * 2; - visited = HDmalloc(sizeof(hbool_t) * iter_info.max_visit); + visited = (hbool_t*)HDmalloc(sizeof(hbool_t) * iter_info.max_visit); CHECK(visited, NULL, "HDmalloc"); iter_info.visited = visited; @@ -8925,6 +9691,9 @@ test_attr(void) /* This next test uses its own file information */ test_attr_dtype_shared(my_fapl); /* Test using shared dataypes in attributes */ + /* This next test uses its own file information */ + test_attr_duplicate_ids(my_fapl); + /* Tests on "new format" attribute storage */ if(new_format == TRUE) { /* Loop over using shared attributes */ @@ -8948,6 +9717,8 @@ test_attr(void) test_attr_dense_rename(my_fcpl, my_fapl); /* Test renaming attributes in dense storage */ test_attr_dense_unlink(my_fcpl, my_fapl); /* Test unlinking object with attributes in dense storage */ test_attr_dense_limits(my_fcpl, my_fapl); /* Test dense attribute storage limits */ + test_attr_dense_dup_ids(my_fcpl, my_fapl); /* Test duplicated IDs for dense attribute storage */ + test_attr_big(my_fcpl, my_fapl); /* Test storing big attribute */ test_attr_null_space(my_fcpl, my_fapl); /* Test storing attribute with NULL dataspace */ test_attr_deprec(fcpl, my_fapl); /* Test deprecated API routines */ diff --git a/test/testhdf5.c b/test/testhdf5.c index 4afbfe8..95ec90c 100644 --- a/test/testhdf5.c +++ b/test/testhdf5.c @@ -87,4 +87,4 @@ main(int argc, char *argv[]) TestCleanup(); return (GetTestNumErrs()); -} /* end main() */ +} /* end main() */ diff --git a/test/tsohm.c b/test/tsohm.c index 0fc94f2..e213d25 100644 --- a/test/tsohm.c +++ b/test/tsohm.c @@ -974,13 +974,16 @@ static void sohm_attr_helper(hid_t fcpl_id) hid_t type_id; hid_t space_id; hid_t group_id; - hid_t attr_id; + hid_t attr_id, attr_id2; hsize_t dims = 2; int wdata[2] = {7, 42}; int rdata[2]; herr_t ret; size_t x; + /*---------------------------------------------------------------------------- + * Test attribute with transient datatype + */ /* Create a file using the fcpl */ file_id = H5Fcreate(FILENAME, H5F_ACC_TRUNC, fcpl_id, H5P_DEFAULT); CHECK_I(file_id, "H5Fcreate"); @@ -1021,6 +1024,9 @@ static void sohm_attr_helper(hid_t fcpl_id) ret = H5Aclose(attr_id); CHECK_I(ret, "H5Aclose"); + /*---------------------------------------------------------------------------- + * Test attribute with committed datatype + */ /* Repeat with a committed datatype */ type_id = H5Tcopy(H5T_NATIVE_INT); CHECK_I(type_id, "H5Tcopy"); @@ -1056,6 +1062,47 @@ static void sohm_attr_helper(hid_t fcpl_id) /* Cleanup */ ret = H5Aclose(attr_id); CHECK_I(ret, "H5Aclose"); + + /*---------------------------------------------------------------------------- + * Test attribute operation with two ID handles + */ + /* Create and verify an attribute */ + group_id = H5Gcreate2(file_id, "yet_another_group", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + CHECK_I(group_id, "H5Gcreate2"); + + attr_id = H5Acreate2(group_id, "attribute", H5T_NATIVE_INT, space_id, H5P_DEFAULT, H5P_DEFAULT); + CHECK_I(attr_id, "H5Acreate2"); + + /* Open the attribute to get another handle */ + attr_id2 = H5Aopen(group_id, "attribute", H5P_DEFAULT); + CHECK_I(attr_id2, "H5Aopen"); + + ret = H5Awrite(attr_id, H5T_NATIVE_INT, wdata); + CHECK_I(ret, "H5Awrite"); + + /* Close the group */ + ret = H5Gclose(group_id); + CHECK_I(ret, "H5Gclose"); + + /* Flush the file to force data to be written */ + ret = H5Fflush(file_id, H5F_SCOPE_GLOBAL); + CHECK_I(ret, "H5Fflush"); + + /* Verify the data with another ID handle */ + memset(rdata, 0, sizeof(rdata)); + ret = H5Aread(attr_id2, H5T_NATIVE_INT, rdata); + CHECK_I(ret, "H5Aread"); + + for(x=0; x<(size_t)dims; ++x) { + VERIFY(rdata[x], wdata[x], "H5Aread"); + } + + /* Cleanup */ + ret = H5Aclose(attr_id); + CHECK_I(ret, "H5Aclose"); + ret = H5Aclose(attr_id2); + CHECK_I(ret, "H5Aclose"); + ret = H5Sclose(space_id); CHECK_I(ret, "H5Sclose"); ret = H5Fclose(file_id); |