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author | Albert Cheng <acheng@hdfgroup.org> | 1998-02-13 23:34:46 (GMT) |
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committer | Albert Cheng <acheng@hdfgroup.org> | 1998-02-13 23:34:46 (GMT) |
commit | 88e3f96bd8cc8d2c83f76b1f6c81e84befd0e90f (patch) | |
tree | ac89b8b001b932b149f319787a59ae69cf35f25b /test | |
parent | 31538e03e0127b98a82391cf65e21db589738e2c (diff) | |
download | hdf5-88e3f96bd8cc8d2c83f76b1f6c81e84befd0e90f.zip hdf5-88e3f96bd8cc8d2c83f76b1f6c81e84befd0e90f.tar.gz hdf5-88e3f96bd8cc8d2c83f76b1f6c81e84befd0e90f.tar.bz2 |
[svn-r274] Moved it to testpar.
Diffstat (limited to 'test')
-rw-r--r-- | test/testphdf5.c | 346 |
1 files changed, 0 insertions, 346 deletions
diff --git a/test/testphdf5.c b/test/testphdf5.c deleted file mode 100644 index 67aff66..0000000 --- a/test/testphdf5.c +++ /dev/null @@ -1,346 +0,0 @@ - -/* Example of using the parallel HDF5 library to access datasets */ - -#include <assert.h> -#include <hdf5.h> -#include <phdf5.h> -#include <mpi.h> -#include <mpio.h> - -/* Temporary source code */ -#include <phdf5src.c> -/* temporary code end */ - -/* Constants definitions */ -#ifdef HAVE_PARALLEL -#define FILE1 "ufs:ParaEg1.h5" -#define FILE2 "ufs:ParaEg2.h5" -#else -#define FILE1 "Eg1.h5" -#define FILE2 "Eg2.h5" -#endif - -/* 24 is a multiple of 2, 3, 4, 6, 8, 12. Neat for parallel tests. */ -#define SPACE1_DIM1 24 -#define SPACE1_DIM2 20 -#define SPACE1_RANK 2 -#define DATASETNAME1 "Data1" -#define DATASETNAME2 "Data2" -#define DATASETNAME3 "Data3" - - -/* Example of using the parallel HDF5 library to create a dataset */ -void -phdf5write() -{ - hid_t fid1, fid2; /* HDF5 file IDs */ - hid_t acc_tpl1; /* File access templates */ - hid_t sid1,sid2; /* Dataspace ID */ - hid_t file_dataspace; /* File dataspace ID */ - hid_t mem_dataspace; /* memory dataspace ID */ - hid_t dataset1, dataset2; /* Dataset ID */ - uint32 rank = SPACE1_RANK; /* Logical rank of dataspace */ - size_t dims1[SPACE1_RANK] = {SPACE1_DIM1,SPACE1_DIM2}; /* dataspace dim sizes */ - int32 data_array1[SPACE1_DIM1][SPACE1_DIM2]; /* data buffer */ - - int start[SPACE1_RANK]; /* for hyperslab setting */ - size_t count[SPACE1_RANK], stride[SPACE1_RANK]; /* for hyperslab setting */ - - herr_t ret; /* Generic return value */ - int i, j; - int numprocs, myid; -#ifdef HAVE_PARALLEL - MPI_Comm comm = MPI_COMM_WORLD; - MPI_Info info = MPI_INFO_NULL; - - /* set up MPI parameters */ - MPI_Comm_size(MPI_COMM_WORLD,&numprocs); - MPI_Comm_rank(MPI_COMM_WORLD,&myid); -#else - numprocs = 1; - myid = 0; -#endif - - - /* setup file access template */ - acc_tpl1 = H5Ccreate (H5C_FILE_ACCESS); - assert(acc_tpl1 != FAIL); - MESG("H5Ccreate access succeed"); -#ifdef HAVE_PARALLEL - /* set Independent Parallel access with communicator */ - ret = H5Cset_mpi(acc_tpl1, comm, info, H5ACC_INDEPENDENT); - assert(ret != FAIL); - MESG("H5Cset_mpi succeed"); -#endif - - /* create the file collectively */ - fid1=H5Fcreate(FILE1,H5ACC_OVERWRITE,0,acc_tpl1); - assert(fid1 != FAIL); - MESG("H5Fcreate succeed"); - - /* Release file-access template */ - ret=H5Mclose(acc_tpl1); - assert(ret != FAIL); - - - /* setup dimensionality object */ - sid1 = H5Pcreate_simple (SPACE1_RANK, dims1, NULL); - assert (sid1 != FAIL); - MESG("H5Pcreate_simple succeed"); - - - /* create a dataset collectively */ - dataset1 = H5Dcreate(fid1, DATASETNAME1, H5T_NATIVE_INT, sid1, - H5C_DEFAULT); - assert(dataset1 != FAIL); - MESG("H5Dcreate succeed"); - - /* create another dataset collectively */ - dataset2 = H5Dcreate(fid1, DATASETNAME2, H5T_NATIVE_INT, sid1, - H5C_DEFAULT); - assert(dataset2 != FAIL); - MESG("H5Dcreate succeed"); - - - - /* set up dimensions of the slab this process accesses */ - start[0] = myid*SPACE1_DIM1/numprocs; - start[1] = 0; - count[0] = SPACE1_DIM1/numprocs; - count[1] = SPACE1_DIM2; - stride[0] = 1; - stride[1] =1; -printf("start[]=(%d,%d), count[]=(%lu,%lu), total datapoints=%lu\n", -start[0], start[1], count[0], count[1], count[0]*count[1]); - - /* put some trivial data in the data_array */ - for (i=0; i < count[0]; i++){ - for (j=0; j < count[1]; j++){ - data_array1[i][j] = (i+start[0])*100 + (j+1); - } - } - MESG("data_array initialized"); - - /* create a file dataspace independently */ - file_dataspace = H5Dget_space (dataset1); - assert(file_dataspace != FAIL); - MESG("H5Dget_space succeed"); - ret=H5Pset_hyperslab(file_dataspace, start, count, stride); - assert(ret != FAIL); - MESG("H5Pset_hyperslab succeed"); - - /* create a memory dataspace independently */ - mem_dataspace = H5Pcreate_simple (SPACE1_RANK, count, NULL); - assert (mem_dataspace != FAIL); - - /* write data independently */ - ret = H5Dwrite(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace, - H5C_DEFAULT, data_array1); - assert(ret != FAIL); - MESG("H5Dwrite succeed"); - - /* write data independently */ - ret = H5Dwrite(dataset2, H5T_NATIVE_INT, mem_dataspace, file_dataspace, - H5C_DEFAULT, data_array1); - assert(ret != FAIL); - MESG("H5Dwrite succeed"); - - /* release dataspace ID */ - H5Pclose(file_dataspace); - - /* close dataset collectively */ - ret=H5Dclose(dataset1); - assert(ret != FAIL); - ret=H5Dclose(dataset2); - assert(ret != FAIL); - - /* release all IDs created */ - H5Mclose(sid1); - - /* close the file collectively */ - H5Fclose(fid1); -} - -/* Example of using the parallel HDF5 library to read a dataset */ -void -phdf5read() -{ - hid_t fid1, fid2; /* HDF5 file IDs */ - hid_t acc_tpl1; /* File access templates */ - hid_t sid1,sid2; /* Dataspace ID */ - hid_t file_dataspace; /* File dataspace ID */ - hid_t mem_dataspace; /* memory dataspace ID */ - hid_t dataset1, dataset2; /* Dataset ID */ - uint32 rank = SPACE1_RANK; /* Logical rank of dataspace */ - size_t dims1[] = {SPACE1_DIM1,SPACE1_DIM2}; /* dataspace dim sizes */ - int32 data_array1[SPACE1_DIM1][SPACE1_DIM2]; /* data buffer */ - - int start[SPACE1_RANK]; /* for hyperslab setting */ - size_t count[SPACE1_RANK], stride[SPACE1_RANK]; /* for hyperslab setting */ - - herr_t ret; /* Generic return value */ - intn i, j; - int numprocs, myid; -#ifdef HAVE_PARALLEL - MPI_Comm comm = MPI_COMM_WORLD; - MPI_Info info = MPI_INFO_NULL; - - /* set up MPI parameters */ - MPI_Comm_size(MPI_COMM_WORLD,&numprocs); - MPI_Comm_rank(MPI_COMM_WORLD,&myid); -#else - numprocs = 1; - myid = 0; -#endif - - - /* setup file access template */ - acc_tpl1 = H5Ccreate (H5C_FILE_ACCESS); - assert(acc_tpl1 != FAIL); -#ifdef HAVE_PARALLEL - /* set Independent Parallel access with communicator */ - ret = H5Cset_mpi(acc_tpl1, comm, info, H5ACC_INDEPENDENT); - assert(ret != FAIL); -#endif - - - /* open the file collectively */ - fid1=H5Fopen(FILE1,H5ACC_WRITE,acc_tpl1); - assert(fid1 != FAIL); - - /* Release file-access template */ - ret=H5Mclose(acc_tpl1); - assert(ret != FAIL); - - /* open the dataset1 collectively */ - dataset1 = H5Dopen(fid1, DATASETNAME1); - assert(dataset1 != FAIL); - - /* open another dataset collectively */ - dataset2 = H5Dopen(fid1, DATASETNAME1); - assert(dataset2 != FAIL); - - - /* set up dimensions of the slab this process accesses */ - start[0] = myid*SPACE1_DIM1/numprocs; - start[1] = 0; - count[0] = SPACE1_DIM1/numprocs; - count[1] = SPACE1_DIM2; - stride[0] = 1; - stride[1] =1; -printf("start[]=(%d,%d), count[]=(%lu,%lu), total datapoints=%lu\n", -start[0], start[1], count[0], count[1], count[0]*count[1]); - - /* create a file dataspace independently */ - file_dataspace = H5Dget_space (dataset1); - assert(file_dataspace != FAIL); - ret=H5Pset_hyperslab(file_dataspace, start, count, stride); - assert(ret != FAIL); - - /* create a memory dataspace independently */ - mem_dataspace = H5Pcreate_simple (SPACE1_RANK, count, NULL); - assert (mem_dataspace != FAIL); - - - - /* read data independently */ - ret = H5Dread(dataset1, H5T_NATIVE_INT, mem_dataspace, file_dataspace, - H5C_DEFAULT, data_array1); - assert(ret != FAIL); - - /* print the slab read */ - for (i=0; i < count[0]; i++){ - printf("Row %d: ", i+start[0]); - for (j=0; j < count[1]; j++){ - printf("%d ", data_array1[i][j]); - } - printf("\n"); - } - - /* read data independently */ - ret = H5Dread(dataset2, H5T_NATIVE_INT, mem_dataspace, file_dataspace, - H5C_DEFAULT, data_array1); - assert(ret != FAIL); - - /* print the slab read */ - for (i=0; i < count[0]; i++){ - printf("Row %d: ", i+start[0]); - for (j=0; j < count[1]; j++){ - printf("%d ", data_array1[i][j]); - } - printf("\n"); - } - - /* close dataset collectively */ - ret=H5Dclose(dataset1); - assert(ret != FAIL); - ret=H5Dclose(dataset2); - assert(ret != FAIL); - - /* release all IDs created */ - H5Pclose(file_dataspace); - - /* close the file collectively */ - H5Fclose(fid1); -} - -void -usage() -{ - printf("Usage: testphdf5 [-r] [-w]\n"); - printf("\t-r\b\bno read\n"); - printf("\t-w\b\bno write\n"); - printf("\tdefault do write then read\n"); - printf("\n"); -} - -main(int argc, char **argv) -{ - int numprocs, myid, namelen; - char processor_name[MPI_MAX_PROCESSOR_NAME]; - int doread=1; /* read test */ - int dowrite=1; /* write test */ - - void usage(); -#ifdef HAVE_PARALLEL - MPI_Init(&argc,&argv); - MPI_Comm_size(MPI_COMM_WORLD,&numprocs); - MPI_Comm_rank(MPI_COMM_WORLD,&myid); - MPI_Get_processor_name(processor_name,&namelen); -pause_proc(MPI_COMM_WORLD, myid, processor_name, namelen, argc, argv); -#endif - - /* parse option */ - while (--argc){ - if (**(++argv) != '-'){ - break; - }else{ - switch(*(*argv+1)){ - case 'r': doread = 0; break; - case 'w': dowrite = 0; break; - default: usage(); break; - } - } - } - - if (dowrite){ - MPI_BANNER("testing PHDF5 writing dataset ..."); - phdf5write(); - } - if (doread){ - MPI_BANNER("testing PHDF5 reading dataset ..."); - phdf5read(); - } - - if (!(dowrite || doread)) - usage(); - else - MPI_BANNER("PHDF5 tests finished"); - -#ifdef HAVE_PARALLEL - MPI_Finalize(); -#endif - - return(0); -} - |