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author | Quincey Koziol <koziol@hdfgroup.org> | 2005-06-18 05:10:36 (GMT) |
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committer | Quincey Koziol <koziol@hdfgroup.org> | 2005-06-18 05:10:36 (GMT) |
commit | 47bd0eecd65317c8ffbae0b403e0f412d6d17551 (patch) | |
tree | d58593770d4183bb52bc11e131cc7a540d6667e1 /test | |
parent | c5ec1ebfbc6ae66d1ddfafbe02c6b6a9d5a08cac (diff) | |
download | hdf5-47bd0eecd65317c8ffbae0b403e0f412d6d17551.zip hdf5-47bd0eecd65317c8ffbae0b403e0f412d6d17551.tar.gz hdf5-47bd0eecd65317c8ffbae0b403e0f412d6d17551.tar.bz2 |
[svn-r10952] Purpose:
Bug fix
Description:
Hyperslab selections that had a selection offset and were applied to a
chunked dataset could get into an infinite loop or core dump if the same
selection was used multiple times, with different selection offsets.
Solution:
"Normalize" the selection with the selection offset, generate the
selections for the chunks overlapped and then "denormalize" the selection.
Platforms tested:
FreeBSD 4.11 (sleipnir)
Too minor to require h5committest
Diffstat (limited to 'test')
-rw-r--r-- | test/tselect.c | 108 |
1 files changed, 108 insertions, 0 deletions
diff --git a/test/tselect.c b/test/tselect.c index e3760d8..b6a1ee8 100644 --- a/test/tselect.c +++ b/test/tselect.c @@ -133,6 +133,11 @@ #define SPACE11_DIM2 100 #define SPACE11_NPOINTS 4 +/* Information for offsets w/chunks test #2 */ +#define SPACE12_RANK 1 +#define SPACE12_DIM0 25 +#define SPACE12_CHUNK_DIM0 5 + /* Location comparison function */ int compare_size_t(const void *s1, const void *s2); @@ -6390,6 +6395,108 @@ test_select_hyper_chunk_offset(void) /**************************************************************** ** +** test_select_hyper_chunk_offset2(): Tests selections on dataspace, +** another test to verify that offsets for hyperslab selections are +** working in chunked datasets. +** +****************************************************************/ +static void +test_select_hyper_chunk_offset2(void) +{ + hid_t file, dataset; /* handles */ + hid_t dataspace; + hid_t memspace; + hid_t dcpl; /* Dataset creation property list */ + herr_t status; + unsigned data_out[SPACE12_DIM0]; /* output buffer */ + unsigned data_in[SPACE12_CHUNK_DIM0]; /* input buffer */ + hsize_t dims[SPACE12_RANK]={SPACE12_DIM0}; /* Dimension size */ + hsize_t chunk_dims[SPACE12_RANK]={SPACE12_CHUNK_DIM0}; /* Chunk size */ + hsize_t start[SPACE12_RANK]; /* Start of hyperslab */ + hsize_t count[SPACE12_RANK]; /* Size of hyperslab */ + hssize_t offset[SPACE12_RANK]; /* hyperslab offset in the file */ + unsigned u, v; /* Local index variables */ + + /* Output message about test being performed */ + MESSAGE(6, ("Testing more hyperslab selections using offsets in chunked datasets\n")); + + /* Initialize data to write out */ + for (u = 0; u < SPACE12_DIM0; u++) + data_out[u] = u; + + /* Create the file */ + file = H5Fcreate(FILENAME, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + CHECK(file, FAIL, "H5Fcreate"); + + /* Create dataspace */ + dataspace = H5Screate_simple(SPACE12_RANK, dims, NULL); + CHECK(dataspace, FAIL, "H5Screate_simple"); + + /* Create dataset creation property list */ + dcpl = H5Pcreate(H5P_DATASET_CREATE); + CHECK(dcpl, FAIL, "H5Pcreate"); + + /* Set chunk sizes */ + status = H5Pset_chunk(dcpl, SPACE12_RANK, chunk_dims); + CHECK(status, FAIL, "H5Pset_chunk"); + + /* Create dataset */ + dataset = H5Dcreate(file, DATASETNAME, H5T_NATIVE_UINT, dataspace, dcpl); + CHECK(dataset, FAIL, "H5Dcreate"); + + /* Close DCPL */ + status = H5Pclose(dcpl); + CHECK(status, FAIL, "H5Pclose"); + + /* Write out entire dataset */ + status = H5Dwrite(dataset, H5T_NATIVE_UINT, H5S_ALL, H5S_ALL, H5P_DEFAULT, data_out); + CHECK(status, FAIL, "H5Dclose"); + + /* Create memory dataspace (same size as a chunk) */ + memspace = H5Screate_simple(SPACE12_RANK, chunk_dims, NULL); + CHECK(dataspace, FAIL, "H5Screate_simple"); + + /* + * Define hyperslab in the file dataspace. + */ + start[0] = 0; + count[0] = SPACE12_CHUNK_DIM0; + status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, start, NULL, count, NULL); + CHECK(status, FAIL, "H5Sselect_hyperslab"); + + /* Loop through retrieving data from file, checking it against data written */ + for(u = 0; u < SPACE12_DIM0; u += SPACE12_CHUNK_DIM0) { + /* Set the offset of the file selection */ + offset[0] = u; + status = H5Soffset_simple(dataspace, offset); + CHECK(status, FAIL, "H5Soffset_simple"); + + /* Read in buffer of data */ + status = H5Dread(dataset, H5T_NATIVE_UINT, memspace, dataspace, + H5P_DEFAULT, data_in); + CHECK(status, FAIL, "H5Dread"); + + /* Check data read in */ + for(v = 0; v < SPACE12_CHUNK_DIM0; v++) + if(data_out[u + v] != data_in[v]) + TestErrPrintf("Error! data_out[%u]=%u, data_in[%u]=%u\n",(unsigned)(u + v), data_out[u + v], v, data_in[v]); + } /* end for */ + + status = H5Dclose(dataset); + CHECK(status, FAIL, "H5Dclose"); + + status = H5Sclose(dataspace); + CHECK(status, FAIL, "H5Sclose"); + + status = H5Sclose(memspace); + CHECK(status, FAIL, "H5Sclose"); + + status = H5Fclose(file); + CHECK(status, FAIL, "H5Fclose"); +} /* test_select_hyper_chunk_offset2() */ + +/**************************************************************** +** ** test_select_bounds(): Tests selection bounds on dataspaces, ** both with and without offsets. ** @@ -6736,6 +6843,7 @@ test_select(void) /* Test using selection offset on hyperslab in chunked dataset */ test_select_hyper_chunk_offset(); + test_select_hyper_chunk_offset2(); /* Test selection bounds with & without offsets */ test_select_bounds(); |